okstra 0.107.2 → 0.109.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (649) hide show
  1. package/package.json +1 -1
  2. package/runtime/BUILD.json +2 -2
  3. package/runtime/prompts/lead/okstra-lead-contract.md +1 -1
  4. package/runtime/prompts/profiles/_common-contract.md +3 -2
  5. package/runtime/python/okstra_ctl/graphify_cmd.py +225 -0
  6. package/runtime/python/okstra_ctl/resolve_task_key.py +15 -9
  7. package/runtime/python/okstra_ctl/session.py +44 -0
  8. package/runtime/python/okstra_project/__init__.py +2 -0
  9. package/runtime/python/okstra_project/state.py +36 -0
  10. package/runtime/python/okstra_token_usage/claude.py +15 -9
  11. package/runtime/python/okstra_token_usage/cli.py +23 -0
  12. package/runtime/python/okstra_token_usage/collect.py +163 -4
  13. package/runtime/python/okstra_vendor/__init__.py +41 -0
  14. package/runtime/python/okstra_vendor/graphify/.vendored-version +1 -0
  15. package/runtime/python/okstra_vendor/graphify/__init__.py +28 -0
  16. package/runtime/python/okstra_vendor/graphify/__main__.py +1371 -0
  17. package/runtime/python/okstra_vendor/graphify/analyze.py +540 -0
  18. package/runtime/python/okstra_vendor/graphify/benchmark.py +129 -0
  19. package/runtime/python/okstra_vendor/graphify/build.py +107 -0
  20. package/runtime/python/okstra_vendor/graphify/cache.py +169 -0
  21. package/runtime/python/okstra_vendor/graphify/cluster.py +137 -0
  22. package/runtime/python/okstra_vendor/graphify/detect.py +510 -0
  23. package/runtime/python/okstra_vendor/graphify/export.py +1014 -0
  24. package/runtime/python/okstra_vendor/graphify/extract.py +3277 -0
  25. package/runtime/python/okstra_vendor/graphify/hooks.py +220 -0
  26. package/runtime/python/okstra_vendor/graphify/ingest.py +297 -0
  27. package/runtime/python/okstra_vendor/graphify/manifest.py +4 -0
  28. package/runtime/python/okstra_vendor/graphify/report.py +175 -0
  29. package/runtime/python/okstra_vendor/graphify/security.py +203 -0
  30. package/runtime/python/okstra_vendor/graphify/serve.py +373 -0
  31. package/runtime/python/okstra_vendor/graphify/skill-aider.md +1184 -0
  32. package/runtime/python/okstra_vendor/graphify/skill-claw.md +1184 -0
  33. package/runtime/python/okstra_vendor/graphify/skill-codex.md +1242 -0
  34. package/runtime/python/okstra_vendor/graphify/skill-copilot.md +1268 -0
  35. package/runtime/python/okstra_vendor/graphify/skill-droid.md +1239 -0
  36. package/runtime/python/okstra_vendor/graphify/skill-kiro.md +1183 -0
  37. package/runtime/python/okstra_vendor/graphify/skill-opencode.md +1238 -0
  38. package/runtime/python/okstra_vendor/graphify/skill-trae.md +1208 -0
  39. package/runtime/python/okstra_vendor/graphify/skill-vscode.md +253 -0
  40. package/runtime/python/okstra_vendor/graphify/skill-windows.md +1245 -0
  41. package/runtime/python/okstra_vendor/graphify/skill.md +1319 -0
  42. package/runtime/python/okstra_vendor/graphify/transcribe.py +182 -0
  43. package/runtime/python/okstra_vendor/graphify/validate.py +72 -0
  44. package/runtime/python/okstra_vendor/graphify/watch.py +188 -0
  45. package/runtime/python/okstra_vendor/graphify/wiki.py +214 -0
  46. package/runtime/python/okstra_vendor/networkx/__init__.py +62 -0
  47. package/runtime/python/okstra_vendor/networkx/algorithms/__init__.py +134 -0
  48. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/__init__.py +26 -0
  49. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clique.py +259 -0
  50. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clustering_coefficient.py +71 -0
  51. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/connectivity.py +412 -0
  52. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/density.py +396 -0
  53. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/distance_measures.py +150 -0
  54. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/dominating_set.py +149 -0
  55. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/kcomponents.py +369 -0
  56. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/matching.py +44 -0
  57. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/maxcut.py +143 -0
  58. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/ramsey.py +53 -0
  59. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/steinertree.py +265 -0
  60. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
  61. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +41 -0
  62. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +112 -0
  63. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +199 -0
  64. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +146 -0
  65. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +59 -0
  66. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +78 -0
  67. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +303 -0
  68. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +8 -0
  69. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +94 -0
  70. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +31 -0
  71. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +306 -0
  72. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +1014 -0
  73. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +274 -0
  74. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +68 -0
  75. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/traveling_salesman.py +1508 -0
  76. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/treewidth.py +255 -0
  77. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/vertex_cover.py +83 -0
  78. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/__init__.py +5 -0
  79. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/connectivity.py +122 -0
  80. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/correlation.py +302 -0
  81. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/mixing.py +255 -0
  82. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/neighbor_degree.py +160 -0
  83. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/pairs.py +127 -0
  84. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
  85. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +81 -0
  86. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +143 -0
  87. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +122 -0
  88. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +174 -0
  89. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +107 -0
  90. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +87 -0
  91. package/runtime/python/okstra_vendor/networkx/algorithms/asteroidal.py +164 -0
  92. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/__init__.py +88 -0
  93. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/basic.py +322 -0
  94. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/centrality.py +290 -0
  95. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/cluster.py +289 -0
  96. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/covering.py +57 -0
  97. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/edgelist.py +360 -0
  98. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/extendability.py +105 -0
  99. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/generators.py +603 -0
  100. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/link_analysis.py +316 -0
  101. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matching.py +590 -0
  102. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matrix.py +232 -0
  103. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/projection.py +526 -0
  104. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/redundancy.py +112 -0
  105. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/spectral.py +69 -0
  106. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
  107. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +125 -0
  108. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +192 -0
  109. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +84 -0
  110. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +33 -0
  111. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +240 -0
  112. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +334 -0
  113. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +407 -0
  114. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +218 -0
  115. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +327 -0
  116. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +138 -0
  117. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +409 -0
  118. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +35 -0
  119. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +80 -0
  120. package/runtime/python/okstra_vendor/networkx/algorithms/boundary.py +168 -0
  121. package/runtime/python/okstra_vendor/networkx/algorithms/bridges.py +205 -0
  122. package/runtime/python/okstra_vendor/networkx/algorithms/broadcasting.py +164 -0
  123. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/__init__.py +20 -0
  124. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness.py +591 -0
  125. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness_subset.py +236 -0
  126. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/closeness.py +282 -0
  127. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness.py +364 -0
  128. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness_subset.py +227 -0
  129. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_closeness.py +96 -0
  130. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/degree_alg.py +150 -0
  131. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/dispersion.py +107 -0
  132. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/eigenvector.py +357 -0
  133. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/flow_matrix.py +130 -0
  134. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/group.py +787 -0
  135. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/harmonic.py +88 -0
  136. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/katz.py +331 -0
  137. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/laplacian.py +150 -0
  138. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/load.py +200 -0
  139. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/percolation.py +128 -0
  140. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/reaching.py +209 -0
  141. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/second_order.py +141 -0
  142. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/subgraph_alg.py +361 -0
  143. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
  144. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +923 -0
  145. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +354 -0
  146. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +274 -0
  147. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +259 -0
  148. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +147 -0
  149. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +43 -0
  150. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +144 -0
  151. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +73 -0
  152. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +186 -0
  153. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +277 -0
  154. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +122 -0
  155. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +345 -0
  156. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +220 -0
  157. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +344 -0
  158. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +87 -0
  159. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +140 -0
  160. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +82 -0
  161. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +110 -0
  162. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +302 -0
  163. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +64 -0
  164. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/trophic.py +181 -0
  165. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/voterank_alg.py +95 -0
  166. package/runtime/python/okstra_vendor/networkx/algorithms/chains.py +172 -0
  167. package/runtime/python/okstra_vendor/networkx/algorithms/chordal.py +443 -0
  168. package/runtime/python/okstra_vendor/networkx/algorithms/clique.py +818 -0
  169. package/runtime/python/okstra_vendor/networkx/algorithms/cluster.py +732 -0
  170. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/__init__.py +4 -0
  171. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/equitable_coloring.py +505 -0
  172. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/greedy_coloring.py +565 -0
  173. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
  174. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +863 -0
  175. package/runtime/python/okstra_vendor/networkx/algorithms/communicability_alg.py +163 -0
  176. package/runtime/python/okstra_vendor/networkx/algorithms/community/__init__.py +28 -0
  177. package/runtime/python/okstra_vendor/networkx/algorithms/community/asyn_fluid.py +153 -0
  178. package/runtime/python/okstra_vendor/networkx/algorithms/community/bipartitions.py +354 -0
  179. package/runtime/python/okstra_vendor/networkx/algorithms/community/centrality.py +171 -0
  180. package/runtime/python/okstra_vendor/networkx/algorithms/community/community_utils.py +30 -0
  181. package/runtime/python/okstra_vendor/networkx/algorithms/community/divisive.py +216 -0
  182. package/runtime/python/okstra_vendor/networkx/algorithms/community/kclique.py +79 -0
  183. package/runtime/python/okstra_vendor/networkx/algorithms/community/label_propagation.py +338 -0
  184. package/runtime/python/okstra_vendor/networkx/algorithms/community/leiden.py +162 -0
  185. package/runtime/python/okstra_vendor/networkx/algorithms/community/local.py +220 -0
  186. package/runtime/python/okstra_vendor/networkx/algorithms/community/louvain.py +384 -0
  187. package/runtime/python/okstra_vendor/networkx/algorithms/community/lukes.py +227 -0
  188. package/runtime/python/okstra_vendor/networkx/algorithms/community/modularity_max.py +452 -0
  189. package/runtime/python/okstra_vendor/networkx/algorithms/community/quality.py +347 -0
  190. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
  191. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +147 -0
  192. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +157 -0
  193. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +85 -0
  194. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +106 -0
  195. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +91 -0
  196. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +241 -0
  197. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +138 -0
  198. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +76 -0
  199. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +264 -0
  200. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +152 -0
  201. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +340 -0
  202. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +139 -0
  203. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +26 -0
  204. package/runtime/python/okstra_vendor/networkx/algorithms/components/__init__.py +6 -0
  205. package/runtime/python/okstra_vendor/networkx/algorithms/components/attracting.py +115 -0
  206. package/runtime/python/okstra_vendor/networkx/algorithms/components/biconnected.py +394 -0
  207. package/runtime/python/okstra_vendor/networkx/algorithms/components/connected.py +282 -0
  208. package/runtime/python/okstra_vendor/networkx/algorithms/components/semiconnected.py +71 -0
  209. package/runtime/python/okstra_vendor/networkx/algorithms/components/strongly_connected.py +359 -0
  210. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
  211. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +70 -0
  212. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +248 -0
  213. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +138 -0
  214. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +55 -0
  215. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +193 -0
  216. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +96 -0
  217. package/runtime/python/okstra_vendor/networkx/algorithms/components/weakly_connected.py +196 -0
  218. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/__init__.py +11 -0
  219. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/connectivity.py +811 -0
  220. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/cuts.py +616 -0
  221. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/disjoint_paths.py +408 -0
  222. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_augmentation.py +1270 -0
  223. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_kcomponents.py +592 -0
  224. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcomponents.py +220 -0
  225. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcutsets.py +235 -0
  226. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/stoerwagner.py +152 -0
  227. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
  228. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +421 -0
  229. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +309 -0
  230. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +249 -0
  231. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +502 -0
  232. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +488 -0
  233. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +323 -0
  234. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +280 -0
  235. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +102 -0
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@@ -0,0 +1,103 @@
1
+ from functools import partial
2
+
3
+ import pytest
4
+
5
+ import networkx as nx
6
+ from networkx.algorithms import isomorphism as iso
7
+
8
+ # Convenience functions for testing that the behavior of `could_be_isomorphic`
9
+ # with the "properties" kwarg is equivalent to the corresponding function (i.e.
10
+ # nx.fast_could_be_isomorphic or nx.faster_could_be_isomorphic)
11
+ fast_cbi = partial(nx.could_be_isomorphic, properties="dt")
12
+ faster_cbi = partial(nx.could_be_isomorphic, properties="d")
13
+
14
+
15
+ def test_graph_could_be_isomorphic_variants_deprecated():
16
+ G1 = nx.Graph([(1, 2), (1, 3), (1, 5), (2, 3)])
17
+ G2 = nx.Graph([(10, 20), (20, 30), (10, 30), (10, 50)])
18
+ with pytest.deprecated_call(): # graph_could_be_isomorphic
19
+ result = nx.isomorphism.isomorph.graph_could_be_isomorphic(G1, G2)
20
+ assert nx.could_be_isomorphic(G1, G2) == result
21
+ with pytest.deprecated_call(): # fast_graph_could_be_isomorphic
22
+ result = nx.isomorphism.isomorph.fast_graph_could_be_isomorphic(G1, G2)
23
+ assert nx.fast_could_be_isomorphic(G1, G2) == result
24
+ with pytest.deprecated_call():
25
+ result = nx.isomorphism.isomorph.faster_graph_could_be_isomorphic(G1, G2)
26
+ assert nx.faster_could_be_isomorphic(G1, G2) == result
27
+
28
+
29
+ @pytest.mark.parametrize("atlas_ids", [(699, 706), (864, 870)])
30
+ def test_could_be_isomorphic_combined_properties(atlas_ids):
31
+ """There are two pairs of graphs from the graph atlas that have the same
32
+ combined degree-triangle distribution, but a different maximal clique
33
+ distribution. See gh-7852."""
34
+ G, H = (nx.graph_atlas(idx) for idx in atlas_ids)
35
+
36
+ assert not nx.is_isomorphic(G, H)
37
+
38
+ # Degree only
39
+ assert nx.faster_could_be_isomorphic(G, H)
40
+ assert nx.could_be_isomorphic(G, H, properties="d")
41
+ # Degrees & triangles
42
+ assert nx.fast_could_be_isomorphic(G, H)
43
+ assert nx.could_be_isomorphic(G, H, properties="dt")
44
+ # Full properties table (degrees, triangles, cliques)
45
+ assert not nx.could_be_isomorphic(G, H)
46
+ assert not nx.could_be_isomorphic(G, H, properties="dtc")
47
+ # For these two cases, the clique distribution alone is enough to verify
48
+ # the graphs can't be isomorphic
49
+ assert not nx.could_be_isomorphic(G, H, properties="c")
50
+
51
+
52
+ def test_could_be_isomorphic_individual_vs_combined_dt():
53
+ """A test case where G and H have identical degree and triangle distributions,
54
+ but are different when compared together"""
55
+ G = nx.Graph([(0, 1), (0, 2), (0, 3), (0, 4), (1, 2), (3, 4), (4, 5), (4, 6)])
56
+ H = G.copy()
57
+ # Modify graphs to produce different clique distributions
58
+ G.add_edge(0, 7)
59
+ H.add_edge(4, 7)
60
+ assert nx.could_be_isomorphic(G, H, properties="d")
61
+ assert nx.could_be_isomorphic(G, H, properties="t")
62
+ assert not nx.could_be_isomorphic(G, H, properties="dt")
63
+ assert not nx.could_be_isomorphic(G, H, properties="c")
64
+
65
+
66
+ class TestIsomorph:
67
+ @classmethod
68
+ def setup_class(cls):
69
+ cls.G1 = nx.Graph([[1, 2], [1, 3], [1, 5], [2, 3]])
70
+ cls.G2 = nx.Graph([[10, 20], [20, 30], [10, 30], [10, 50]])
71
+ cls.G3 = nx.Graph([[1, 2], [1, 3], [1, 5], [2, 5]])
72
+ cls.G4 = nx.Graph([[1, 2], [1, 3], [1, 5], [2, 4]])
73
+ cls.G5 = nx.Graph([[1, 2], [1, 3]])
74
+ cls.G6 = nx.Graph([[10, 20], [20, 30], [10, 30], [10, 50], [20, 50]])
75
+
76
+ def test_could_be_isomorphic(self):
77
+ assert iso.could_be_isomorphic(self.G1, self.G2)
78
+ assert iso.could_be_isomorphic(self.G1, self.G3)
79
+ assert not iso.could_be_isomorphic(self.G1, self.G4)
80
+ assert iso.could_be_isomorphic(self.G3, self.G2)
81
+ assert not iso.could_be_isomorphic(self.G1, self.G6)
82
+
83
+ @pytest.mark.parametrize("fn", (iso.fast_could_be_isomorphic, fast_cbi))
84
+ def test_fast_could_be_isomorphic(self, fn):
85
+ assert fn(self.G3, self.G2)
86
+ assert not fn(self.G3, self.G5)
87
+ assert not fn(self.G1, self.G6)
88
+
89
+ @pytest.mark.parametrize("fn", (iso.faster_could_be_isomorphic, faster_cbi))
90
+ def test_faster_could_be_isomorphic(self, fn):
91
+ assert fn(self.G3, self.G2)
92
+ assert not fn(self.G3, self.G5)
93
+ assert not fn(self.G1, self.G6)
94
+
95
+ def test_is_isomorphic(self):
96
+ assert iso.is_isomorphic(self.G1, self.G2)
97
+ assert not iso.is_isomorphic(self.G1, self.G4)
98
+ assert iso.is_isomorphic(self.G1.to_directed(), self.G2.to_directed())
99
+ assert not iso.is_isomorphic(self.G1.to_directed(), self.G4.to_directed())
100
+ with pytest.raises(
101
+ nx.NetworkXError, match="Graphs G1 and G2 are not of the same type."
102
+ ):
103
+ iso.is_isomorphic(self.G1.to_directed(), self.G1)
@@ -0,0 +1,490 @@
1
+ """
2
+ Tests for VF2 isomorphism algorithm.
3
+ """
4
+
5
+ import importlib.resources
6
+ import random
7
+ import struct
8
+
9
+ import pytest
10
+
11
+ import networkx as nx
12
+ from networkx.algorithms import isomorphism as iso
13
+
14
+
15
+ class TestWikipediaExample:
16
+ # Source: https://en.wikipedia.org/wiki/Graph_isomorphism
17
+
18
+ # Nodes 'a', 'b', 'c' and 'd' form a column.
19
+ # Nodes 'g', 'h', 'i' and 'j' form a column.
20
+ # isomorphism: {'a': 1, 'g': 2, 'b': 3, 'c': 6, 'h': 4, 'i': 5, 'j': 7, 'd': 8}
21
+ g1edges = [
22
+ ["a", "g"],
23
+ ["a", "h"],
24
+ ["a", "i"],
25
+ ["b", "g"],
26
+ ["b", "h"],
27
+ ["b", "j"],
28
+ ["c", "g"],
29
+ ["c", "i"],
30
+ ["c", "j"],
31
+ ["d", "h"],
32
+ ["d", "i"],
33
+ ["d", "j"],
34
+ ]
35
+
36
+ # Nodes 1,2,3,4 form the clockwise corners of a large square.
37
+ # Nodes 5,6,7,8 form the clockwise corners of a small square
38
+ g2edges = [
39
+ [1, 2],
40
+ [3, 2],
41
+ [3, 4],
42
+ [1, 4],
43
+ [6, 5],
44
+ [6, 7],
45
+ [8, 7],
46
+ [8, 5],
47
+ [1, 5],
48
+ [6, 2],
49
+ [3, 7],
50
+ [8, 4],
51
+ ]
52
+
53
+ @pytest.mark.parametrize(
54
+ ["graph_class", "numb_maps"], [(nx.Graph, 48), (nx.DiGraph, 24)]
55
+ )
56
+ def test_morphic_and_number_of_mappings(self, graph_class, numb_maps):
57
+ g1 = graph_class(self.g1edges)
58
+ g2 = graph_class(self.g2edges)
59
+ Matcher = iso.DiGraphMatcher if g1.is_directed() else iso.GraphMatcher
60
+ gm = Matcher(g1, g2)
61
+ assert gm.is_isomorphic()
62
+ assert gm.subgraph_is_monomorphic()
63
+ assert gm.subgraph_is_isomorphic()
64
+
65
+ mapping = list(gm.mapping.items())
66
+ # this mapping is only one of the 48 possibilities
67
+ all_mappings = list(gm.isomorphisms_iter())
68
+ assert len(all_mappings) == numb_maps
69
+ assert dict(mapping) in all_mappings
70
+
71
+ @pytest.mark.parametrize("graph_class", [nx.Graph, nx.DiGraph])
72
+ def test_subgraph(self, graph_class):
73
+ g1 = graph_class(self.g1edges)
74
+ g2 = graph_class(self.g2edges)
75
+ g3 = g2.subgraph([1, 2, 3, 4])
76
+ Matcher = iso.DiGraphMatcher if g1.is_directed() else iso.GraphMatcher
77
+ gm = Matcher(g1, g3)
78
+ assert not gm.is_isomorphic()
79
+ assert gm.subgraph_is_isomorphic()
80
+ assert gm.subgraph_is_monomorphic()
81
+
82
+ @pytest.mark.parametrize("graph_class", [nx.Graph, nx.DiGraph])
83
+ def test_subgraph_mono(self, graph_class):
84
+ g1 = graph_class(self.g1edges)
85
+ g2 = graph_class(["ag", "cg", "ci", "di", "bg"])
86
+ Matcher = iso.DiGraphMatcher if g1.is_directed() else iso.GraphMatcher
87
+ gm = Matcher(g1, g2)
88
+ assert not gm.is_isomorphic()
89
+ assert not gm.subgraph_is_isomorphic()
90
+ assert gm.subgraph_is_monomorphic()
91
+
92
+ # note: this shows need to recreate the matcher for each graph change
93
+ # Also checking not monomorphic
94
+ g2.add_edge("c", "a")
95
+ gm = Matcher(g1, g2)
96
+ assert not gm.subgraph_is_monomorphic()
97
+
98
+
99
+ class TestVF2GraphDB:
100
+ # https://web.archive.org/web/20090303210205/http://amalfi.dis.unina.it/graph/db/
101
+
102
+ @staticmethod
103
+ def create_graph(filename):
104
+ """Creates a Graph instance from the filename."""
105
+
106
+ # The file is assumed to be in the format from the VF2 graph database.
107
+ # Each file is composed of 16-bit numbers (unsigned short int).
108
+ # So we will want to read 2 bytes at a time.
109
+
110
+ # We can read the number as follows:
111
+ # number = struct.unpack('<H', file.read(2))
112
+ # This says, expect the data in little-endian encoding
113
+ # as an unsigned short int and unpack 2 bytes from the file.
114
+
115
+ fh = open(filename, mode="rb")
116
+
117
+ # Grab the number of nodes.
118
+ # Node numeration is 0-based, so the first node has index 0.
119
+ nodes = struct.unpack("<H", fh.read(2))[0]
120
+
121
+ graph = nx.Graph()
122
+ for from_node in range(nodes):
123
+ # Get the number of edges.
124
+ edges = struct.unpack("<H", fh.read(2))[0]
125
+ for edge in range(edges):
126
+ # Get the terminal node.
127
+ to_node = struct.unpack("<H", fh.read(2))[0]
128
+ graph.add_edge(from_node, to_node)
129
+
130
+ fh.close()
131
+ return graph
132
+
133
+ def test_graph(self):
134
+ head = importlib.resources.files("networkx.algorithms.isomorphism.tests")
135
+ g1 = self.create_graph(head / "iso_r01_s80.A99")
136
+ g2 = self.create_graph(head / "iso_r01_s80.B99")
137
+ gm = iso.GraphMatcher(g1, g2)
138
+ assert gm.is_isomorphic()
139
+
140
+ def test_subgraph(self):
141
+ # A is the subgraph
142
+ # B is the full graph
143
+ head = importlib.resources.files("networkx.algorithms.isomorphism.tests")
144
+ subgraph = self.create_graph(head / "si2_b06_m200.A99")
145
+ graph = self.create_graph(head / "si2_b06_m200.B99")
146
+ gm = iso.GraphMatcher(graph, subgraph)
147
+ assert not gm.is_isomorphic()
148
+ assert gm.subgraph_is_isomorphic()
149
+ assert gm.subgraph_is_monomorphic()
150
+
151
+ def test_subgraph_monomorphic(self):
152
+ # A is the subgraph
153
+ # B is the full graph
154
+ head = importlib.resources.files("networkx.algorithms.isomorphism.tests")
155
+ subgraph = self.create_graph(head / "si2_b06_m200.A99")
156
+ graph = self.create_graph(head / "si2_b06_m200.B99")
157
+ subgraph.remove_edge(29, 28)
158
+ gm = iso.GraphMatcher(graph, subgraph)
159
+ assert not gm.is_isomorphic()
160
+ assert not gm.subgraph_is_isomorphic()
161
+ assert gm.subgraph_is_monomorphic()
162
+
163
+ # now add new edge to make sg no longer monomorphic
164
+ subgraph.add_edge(29, 2)
165
+ assert not gm.subgraph_is_monomorphic()
166
+
167
+
168
+ class TestAtlas:
169
+ @classmethod
170
+ def setup_class(cls):
171
+ global atlas
172
+ from networkx.generators import atlas
173
+
174
+ cls.GAG = atlas.graph_atlas_g()
175
+
176
+ def test_graph_atlas(self):
177
+ rng = random.Random(42)
178
+ # Atlas = nx.graph_atlas_g()[0:208] # 208, 6 nodes or less
179
+ Atlas = self.GAG[0:100]
180
+ alphabet = list(range(26))
181
+ for graph in Atlas:
182
+ nlist = list(graph)
183
+ labels = alphabet[: len(nlist)]
184
+ for _ in range(10):
185
+ rng.shuffle(labels)
186
+ d = dict(zip(nlist, labels))
187
+ relabel = nx.relabel_nodes(graph, d)
188
+ gm = iso.GraphMatcher(graph, relabel)
189
+ assert gm.is_isomorphic()
190
+
191
+
192
+ def test_multiedge():
193
+ # Simple test for multigraphs
194
+ # Need something much more rigorous
195
+ edges = [
196
+ (0, 1),
197
+ (1, 2),
198
+ (2, 3),
199
+ (3, 4),
200
+ (4, 5),
201
+ (5, 6),
202
+ (6, 7),
203
+ (7, 8),
204
+ (8, 9),
205
+ (9, 10),
206
+ (10, 11),
207
+ (10, 11),
208
+ (11, 12),
209
+ (11, 12),
210
+ (12, 13),
211
+ (12, 13),
212
+ (13, 14),
213
+ (13, 14),
214
+ (14, 15),
215
+ (14, 15),
216
+ (15, 16),
217
+ (15, 16),
218
+ (16, 17),
219
+ (16, 17),
220
+ (17, 18),
221
+ (17, 18),
222
+ (18, 19),
223
+ (18, 19),
224
+ (19, 0),
225
+ (19, 0),
226
+ ]
227
+ nodes = list(range(20))
228
+
229
+ rng = random.Random(42)
230
+
231
+ for g1 in [nx.MultiGraph(), nx.MultiDiGraph()]:
232
+ g1.add_edges_from(edges)
233
+ for _ in range(10):
234
+ new_nodes = list(nodes)
235
+ rng.shuffle(new_nodes)
236
+ d = dict(zip(nodes, new_nodes))
237
+ g2 = nx.relabel_nodes(g1, d)
238
+ if not g1.is_directed():
239
+ gm = iso.GraphMatcher(g1, g2)
240
+ else:
241
+ gm = iso.DiGraphMatcher(g1, g2)
242
+ assert gm.is_isomorphic()
243
+ # Testing if monomorphism works in multigraphs
244
+ assert gm.subgraph_is_monomorphic()
245
+
246
+
247
+ @pytest.mark.parametrize("G1", [nx.Graph(), nx.MultiGraph()])
248
+ @pytest.mark.parametrize("G2", [nx.Graph(), nx.MultiGraph()])
249
+ def test_matcher_raises(G1, G2):
250
+ undirected_matchers = [iso.GraphMatcher, iso.MultiGraphMatcher]
251
+ directed_matchers = [iso.DiGraphMatcher, iso.MultiDiGraphMatcher]
252
+
253
+ for matcher in undirected_matchers:
254
+ matcher(G1, G2)
255
+
256
+ msg = r"\(Multi-\)GraphMatcher\(\) not defined for directed graphs"
257
+ with pytest.raises(nx.NetworkXError, match=msg):
258
+ matcher(G1.to_directed(), G2.to_directed())
259
+
260
+ for matcher in directed_matchers:
261
+ matcher(G1.to_directed(), G2.to_directed())
262
+
263
+ msg = r"\(Multi-\)DiGraphMatcher\(\) not defined for undirected graphs"
264
+ with pytest.raises(nx.NetworkXError, match=msg):
265
+ matcher(G1, G2)
266
+
267
+ for matcher in undirected_matchers + directed_matchers:
268
+ msg = r"G1 and G2 must have the same directedness"
269
+ with pytest.raises(nx.NetworkXError, match=msg):
270
+ matcher(G1, G2.to_directed())
271
+ with pytest.raises(nx.NetworkXError, match=msg):
272
+ matcher(G1.to_directed(), G2)
273
+
274
+
275
+ def test_selfloop():
276
+ # Simple test for graphs with selfloops
277
+ edges = [
278
+ (0, 1),
279
+ (0, 2),
280
+ (1, 2),
281
+ (1, 3),
282
+ (2, 2),
283
+ (2, 4),
284
+ (3, 1),
285
+ (3, 2),
286
+ (4, 2),
287
+ (4, 5),
288
+ (5, 4),
289
+ ]
290
+ nodes = list(range(6))
291
+
292
+ rng = random.Random(42)
293
+
294
+ for g1 in [nx.Graph(), nx.DiGraph()]:
295
+ g1.add_edges_from(edges)
296
+ for _ in range(100):
297
+ new_nodes = list(nodes)
298
+ rng.shuffle(new_nodes)
299
+ d = dict(zip(nodes, new_nodes))
300
+ g2 = nx.relabel_nodes(g1, d)
301
+ if not g1.is_directed():
302
+ gm = iso.GraphMatcher(g1, g2)
303
+ else:
304
+ gm = iso.DiGraphMatcher(g1, g2)
305
+ assert gm.is_isomorphic()
306
+
307
+
308
+ def test_selfloop_mono():
309
+ # Simple test for graphs with selfloops
310
+ edges0 = [
311
+ (0, 1),
312
+ (0, 2),
313
+ (1, 2),
314
+ (1, 3),
315
+ (2, 4),
316
+ (3, 1),
317
+ (3, 2),
318
+ (4, 2),
319
+ (4, 5),
320
+ (5, 4),
321
+ ]
322
+ edges = edges0 + [(2, 2)]
323
+ nodes = list(range(6))
324
+
325
+ rng = random.Random(42)
326
+
327
+ for g1 in [nx.Graph(), nx.DiGraph()]:
328
+ g1.add_edges_from(edges)
329
+ for _ in range(100):
330
+ new_nodes = list(nodes)
331
+ rng.shuffle(new_nodes)
332
+ d = dict(zip(nodes, new_nodes))
333
+ g2 = nx.relabel_nodes(g1, d)
334
+ g2.remove_edges_from(nx.selfloop_edges(g2))
335
+ if not g1.is_directed():
336
+ gm = iso.GraphMatcher(g2, g1)
337
+ else:
338
+ gm = iso.DiGraphMatcher(g2, g1)
339
+ assert not gm.subgraph_is_monomorphic()
340
+
341
+
342
+ def test_isomorphism_iter1():
343
+ # As described in:
344
+ # http://groups.google.com/group/networkx-discuss/browse_thread/thread/2ff65c67f5e3b99f/d674544ebea359bb?fwc=1
345
+ g1 = nx.DiGraph(["AB", "BC"])
346
+ g2 = nx.DiGraph(["YZ"])
347
+ g3 = nx.DiGraph(["ZY"])
348
+ gm12 = iso.DiGraphMatcher(g1, g2)
349
+ gm13 = iso.DiGraphMatcher(g1, g3)
350
+ x = list(gm12.subgraph_isomorphisms_iter())
351
+ y = list(gm13.subgraph_isomorphisms_iter())
352
+ assert {"A": "Y", "B": "Z"} in x
353
+ assert {"B": "Y", "C": "Z"} in x
354
+ assert {"A": "Z", "B": "Y"} in y
355
+ assert {"B": "Z", "C": "Y"} in y
356
+ assert len(x) == len(y)
357
+ assert len(x) == 2
358
+
359
+
360
+ def test_monomorphism_iter1():
361
+ g1 = nx.DiGraph(["AB", "BC", "CA"])
362
+ g2 = nx.DiGraph(["XY", "YZ"])
363
+ gm12 = iso.DiGraphMatcher(g1, g2)
364
+ x = list(gm12.subgraph_monomorphisms_iter())
365
+ assert {"A": "X", "B": "Y", "C": "Z"} in x
366
+ assert {"A": "Y", "B": "Z", "C": "X"} in x
367
+ assert {"A": "Z", "B": "X", "C": "Y"} in x
368
+ assert len(x) == 3
369
+ gm21 = iso.DiGraphMatcher(g2, g1)
370
+ # Check if StopIteration exception returns False
371
+ assert not gm21.subgraph_is_monomorphic()
372
+
373
+
374
+ def test_isomorphism_iter2():
375
+ # Path
376
+ for L in range(2, 10):
377
+ g1 = nx.path_graph(L)
378
+ gm = iso.GraphMatcher(g1, g1)
379
+ s = len(list(gm.isomorphisms_iter()))
380
+ assert s == 2
381
+ # Cycle
382
+ for L in range(3, 10):
383
+ g1 = nx.cycle_graph(L)
384
+ gm = iso.GraphMatcher(g1, g1)
385
+ s = len(list(gm.isomorphisms_iter()))
386
+ assert s == 2 * L
387
+
388
+
389
+ def test_multiple():
390
+ # Verify that we can use the graph matcher multiple times
391
+ edges = [("A", "B"), ("B", "A"), ("B", "C")]
392
+ for g1, g2 in [(nx.Graph(), nx.Graph()), (nx.DiGraph(), nx.DiGraph())]:
393
+ g1.add_edges_from(edges)
394
+ g2.add_edges_from(edges)
395
+ g3 = nx.subgraph(g2, ["A", "B"])
396
+ if not g1.is_directed():
397
+ gmA = iso.GraphMatcher(g1, g2)
398
+ gmB = iso.GraphMatcher(g1, g3)
399
+ else:
400
+ gmA = iso.DiGraphMatcher(g1, g2)
401
+ gmB = iso.DiGraphMatcher(g1, g3)
402
+ assert gmA.is_isomorphic()
403
+
404
+ g2.remove_node("C")
405
+ if not g1.is_directed():
406
+ gmA = iso.GraphMatcher(g1, g2)
407
+ else:
408
+ gmA = iso.DiGraphMatcher(g1, g2)
409
+ assert gmA.subgraph_is_isomorphic()
410
+ assert gmB.subgraph_is_isomorphic()
411
+ assert gmA.subgraph_is_monomorphic()
412
+ assert gmB.subgraph_is_monomorphic()
413
+
414
+
415
+ def test_noncomparable_nodes():
416
+ node1 = object()
417
+ node2 = object()
418
+ node3 = object()
419
+
420
+ # Graph
421
+ G = nx.path_graph([node1, node2, node3])
422
+ gm = iso.GraphMatcher(G, G)
423
+ assert gm.is_isomorphic()
424
+ assert gm.subgraph_is_monomorphic()
425
+
426
+ # DiGraph
427
+ G = nx.path_graph([node1, node2, node3], create_using=nx.DiGraph)
428
+ H = nx.path_graph([node3, node2, node1], create_using=nx.DiGraph)
429
+ dgm = iso.DiGraphMatcher(G, H)
430
+ assert dgm.is_isomorphic()
431
+ assert dgm.subgraph_is_monomorphic()
432
+
433
+
434
+ def test_monomorphism_edge_match():
435
+ G = nx.DiGraph()
436
+ G.add_node(1)
437
+ G.add_node(2)
438
+ G.add_edge(1, 2, label="A")
439
+ G.add_edge(2, 1, label="B")
440
+ G.add_edge(2, 2, label="C")
441
+
442
+ SG = nx.DiGraph()
443
+ SG.add_node(5)
444
+ SG.add_node(6)
445
+ SG.add_edge(5, 6, label="A")
446
+
447
+ gm = iso.DiGraphMatcher(G, SG, edge_match=iso.categorical_edge_match("label", None))
448
+ assert gm.subgraph_is_monomorphic()
449
+ G.edges[1, 2]["label"] = None
450
+ assert not gm.subgraph_is_monomorphic()
451
+
452
+
453
+ @pytest.mark.parametrize(
454
+ ("e1", "e2", "isomorphic", "subgraph_is_isomorphic"),
455
+ [
456
+ ([(0, 1), (0, 2)], [(0, 1), (0, 2), (1, 2)], False, False),
457
+ ([(0, 1), (0, 2)], [(0, 1), (0, 2), (2, 1)], False, False),
458
+ ([(0, 1), (1, 2)], [(0, 1), (1, 2), (2, 0)], False, False),
459
+ ([(0, 1)], [(0, 1), (1, 2), (2, 0)], False, False),
460
+ ([(0, 1), (1, 2), (2, 0)], [(0, 1)], False, True),
461
+ ([(0, 1), (1, 2)], [(0, 1), (2, 0), (2, 1)], False, False),
462
+ ([(0, 1), (0, 2), (1, 2)], [(0, 1), (0, 2), (2, 1)], True, True),
463
+ ([(0, 1), (0, 2), (1, 2)], [(0, 1), (1, 2), (2, 0)], False, False),
464
+ (
465
+ [(0, 0), (0, 1), (1, 2), (2, 1)],
466
+ [(0, 1), (1, 0), (1, 2), (2, 0)],
467
+ False,
468
+ False,
469
+ ),
470
+ (
471
+ [(0, 0), (1, 0), (1, 2), (2, 1)],
472
+ [(0, 1), (0, 2), (1, 0), (1, 2)],
473
+ False,
474
+ False,
475
+ ),
476
+ (
477
+ [(0, 0), (0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1), (2, 2)],
478
+ [(0, 0), (0, 1), (0, 2), (1, 1), (1, 2), (2, 0), (2, 1), (2, 2)],
479
+ False,
480
+ False,
481
+ ),
482
+ ],
483
+ )
484
+ def test_three_node(e1, e2, isomorphic, subgraph_is_isomorphic):
485
+ """Test some edge cases distilled from arbitrary search of the input space."""
486
+ G1 = nx.DiGraph(e1)
487
+ G2 = nx.DiGraph(e2)
488
+ gm = iso.DiGraphMatcher(G1, G2)
489
+ assert gm.is_isomorphic() == isomorphic
490
+ assert gm.subgraph_is_isomorphic() == subgraph_is_isomorphic
@@ -0,0 +1,64 @@
1
+ from operator import eq
2
+
3
+ import networkx as nx
4
+ from networkx.algorithms import isomorphism as iso
5
+
6
+
7
+ def test_categorical_node_match():
8
+ nm = iso.categorical_node_match(["x", "y", "z"], [None] * 3)
9
+ assert nm({"x": 1, "y": 2, "z": 3}, {"x": 1, "y": 2, "z": 3})
10
+ assert not nm({"x": 1, "y": 2, "z": 2}, {"x": 1, "y": 2, "z": 1})
11
+
12
+
13
+ class TestGenericMultiEdgeMatch:
14
+ def setup_method(self):
15
+ self.G1 = nx.MultiDiGraph()
16
+ self.G2 = nx.MultiDiGraph()
17
+ self.G3 = nx.MultiDiGraph()
18
+ self.G4 = nx.MultiDiGraph()
19
+ attr_dict1 = {"id": "edge1", "minFlow": 0, "maxFlow": 10}
20
+ attr_dict2 = {"id": "edge2", "minFlow": -3, "maxFlow": 7}
21
+ attr_dict3 = {"id": "edge3", "minFlow": 13, "maxFlow": 117}
22
+ attr_dict4 = {"id": "edge4", "minFlow": 13, "maxFlow": 117}
23
+ attr_dict5 = {"id": "edge5", "minFlow": 8, "maxFlow": 12}
24
+ attr_dict6 = {"id": "edge6", "minFlow": 8, "maxFlow": 12}
25
+ for attr_dict in [
26
+ attr_dict1,
27
+ attr_dict2,
28
+ attr_dict3,
29
+ attr_dict4,
30
+ attr_dict5,
31
+ attr_dict6,
32
+ ]:
33
+ self.G1.add_edge(1, 2, **attr_dict)
34
+ for attr_dict in [
35
+ attr_dict5,
36
+ attr_dict3,
37
+ attr_dict6,
38
+ attr_dict1,
39
+ attr_dict4,
40
+ attr_dict2,
41
+ ]:
42
+ self.G2.add_edge(2, 3, **attr_dict)
43
+ for attr_dict in [attr_dict3, attr_dict5]:
44
+ self.G3.add_edge(3, 4, **attr_dict)
45
+ for attr_dict in [attr_dict6, attr_dict4]:
46
+ self.G4.add_edge(4, 5, **attr_dict)
47
+
48
+ def test_generic_multiedge_match(self):
49
+ full_match = iso.generic_multiedge_match(
50
+ ["id", "flowMin", "flowMax"], [None] * 3, [eq] * 3
51
+ )
52
+ flow_match = iso.generic_multiedge_match(
53
+ ["flowMin", "flowMax"], [None] * 2, [eq] * 2
54
+ )
55
+ min_flow_match = iso.generic_multiedge_match("flowMin", None, eq)
56
+ id_match = iso.generic_multiedge_match("id", None, eq)
57
+ assert flow_match(self.G1[1][2], self.G2[2][3])
58
+ assert min_flow_match(self.G1[1][2], self.G2[2][3])
59
+ assert id_match(self.G1[1][2], self.G2[2][3])
60
+ assert full_match(self.G1[1][2], self.G2[2][3])
61
+ assert flow_match(self.G3[3][4], self.G4[4][5])
62
+ assert min_flow_match(self.G3[3][4], self.G4[4][5])
63
+ assert not id_match(self.G3[3][4], self.G4[4][5])
64
+ assert not full_match(self.G3[3][4], self.G4[4][5])