molstar 2.3.6 → 2.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/index.d.ts +1 -1
- package/lib/apps/viewer/index.js +3 -3
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +20 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/viewer/index.d.ts +8 -8
- package/lib/commonjs/apps/viewer/index.js +3 -3
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +20 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/model.js +15 -15
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/state.js +5 -5
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.js +4 -4
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +3 -3
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +28 -18
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +31 -2
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js +87 -15
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +27 -18
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/ui.js +24 -20
- package/lib/commonjs/extensions/geo-export/ui.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +31 -21
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +2 -2
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/ui.js +7 -6
- package/lib/commonjs/extensions/mp4-export/ui.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +22 -21
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -5
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
- package/lib/commonjs/mol-canvas3d/canvas3d.js +3 -3
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/draw.js +3 -11
- package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +13 -1
- package/lib/commonjs/mol-geo/geometry/base.js +37 -2
- package/lib/commonjs/mol-geo/geometry/base.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +9 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +154 -35
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +0 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +7 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +162 -27
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/transparency-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +4 -4
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +1 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -3
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/util.d.ts +25 -6
- package/lib/commonjs/mol-gl/compute/util.js +76 -21
- package/lib/commonjs/mol-gl/compute/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/image.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/lines.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/mesh.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/points.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/schema.d.ts +16 -0
- package/lib/commonjs/mol-gl/renderable/schema.js +8 -0
- package/lib/commonjs/mol-gl/renderable/schema.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/spheres.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/text.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +22 -13
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js +1 -1
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
- package/lib/commonjs/mol-gl/renderer.js +3 -0
- package/lib/commonjs/mol-gl/renderer.js.map +1 -1
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +2 -2
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +2 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +2 -2
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/shader.js +3 -3
- package/lib/commonjs/mol-gl/webgl/shader.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/state.d.ts +4 -1
- package/lib/commonjs/mol-gl/webgl/state.js +25 -1
- package/lib/commonjs/mol-gl/webgl/state.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/texture.js +2 -2
- package/lib/commonjs/mol-gl/webgl/texture.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/uniform.js +2 -2
- package/lib/commonjs/mol-gl/webgl/uniform.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/vertex-array.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js +9 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js.map +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js.map +1 -1
- package/lib/commonjs/mol-io/common/typed-array.d.ts +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js.map +1 -1
- package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js +51 -0
- package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js.map +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/data-model.js +7 -7
- package/lib/commonjs/mol-io/reader/cif/data-model.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.d.ts +8 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js +15 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +4 -4
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema.js +7 -7
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@@ -7,6 +7,7 @@
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7
7
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import { __awaiter, __generator } from "tslib";
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8
8
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import { ParamDefinition as PD } from '../../mol-util/param-definition';
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9
9
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import { StructureRepresentationStateBuilder } from './representation';
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10
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+
import { Representation } from '../representation';
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import { Structure, StructureElement, Bond } from '../../mol-model/structure';
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import { Subject } from 'rxjs';
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12
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import { getNextMaterialId } from '../../mol-gl/render-object';
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@@ -21,6 +22,7 @@ export function ComplexRepresentation(label, ctx, getParams, visualCtor) {
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var version = 0;
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var webgl = ctx.webgl;
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var updated = new Subject();
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var geometryState = new Representation.GeometryState();
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var materialId = getNextMaterialId();
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var renderObjects = [];
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var _state = StructureRepresentationStateBuilder.create();
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@@ -66,10 +68,14 @@ export function ComplexRepresentation(label, ctx, getParams, visualCtor) {
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setState(_state); // current state for new visual
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// update list of renderObjects
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renderObjects.length = 0;
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-
if (visual && visual.renderObject)
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if (visual && visual.renderObject) {
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renderObjects.push(visual.renderObject);
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geometryState.add(visual.renderObject.id, visual.geometryVersion);
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}
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geometryState.snapshot();
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// increment version
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72
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-
|
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|
+
version += 1;
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+
updated.next(version);
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|
return [2 /*return*/];
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74
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|
}
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75
81
|
});
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@@ -115,12 +121,12 @@ export function ComplexRepresentation(label, ctx, getParams, visualCtor) {
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115
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if (state.overpaint !== undefined && visual) {
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// Remap loci from equivalent structure to the current structure
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var remappedOverpaint = Overpaint.remap(state.overpaint, _structure);
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118
|
-
visual.setOverpaint(remappedOverpaint);
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+
visual.setOverpaint(remappedOverpaint, webgl);
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119
125
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}
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if (state.transparency !== undefined && visual) {
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|
// Remap loci from equivalent structure to the current structure
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122
128
|
var remappedTransparency = Transparency.remap(state.transparency, _structure);
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123
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-
visual.setTransparency(remappedTransparency);
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129
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+
visual.setTransparency(remappedTransparency, webgl);
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124
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|
}
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if (state.clipping !== undefined && visual) {
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|
// Remap loci from equivalent structure to the current structure
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@@ -152,6 +158,7 @@ export function ComplexRepresentation(label, ctx, getParams, visualCtor) {
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152
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get params() { return _params; },
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153
159
|
get state() { return _state; },
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154
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|
get theme() { return _theme; },
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161
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+
get geometryVersion() { return geometryState.version; },
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155
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renderObjects: renderObjects,
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156
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updated: updated,
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157
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|
createOrUpdate: createOrUpdate,
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@@ -1 +1 @@
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1
|
-
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|
|
1
|
+
{"version":3,"file":"complex-representation.js","sourceRoot":"","sources":["../../../src/mol-repr/structure/complex-representation.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,iCAAiC,CAAC;AACxE,OAAO,EAA0C,mCAAmC,EAAgC,MAAM,kBAAkB,CAAC;AAC7I,OAAO,EAAE,cAAc,EAAqD,MAAM,mBAAmB,CAAC;AACtG,OAAO,EAAE,SAAS,EAAE,gBAAgB,EAAE,IAAI,EAAE,MAAM,2BAA2B,CAAC;AAC9E,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAC/B,OAAO,EAAE,iBAAiB,EAAwB,MAAM,4BAA4B,CAAC;AACrF,OAAO,EAAE,KAAK,EAAE,MAAM,uBAAuB,CAAC;AAC9C,OAAO,EAAE,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAEtC,OAAO,EAAE,SAAS,EAAE,IAAI,EAAE,WAAW,EAAE,UAAU,EAAE,SAAS,EAAE,MAAM,sBAAsB,CAAC;AAC3F,OAAO,EAAgB,aAAa,EAAE,MAAM,8BAA8B,CAAC;AAC3E,OAAO,EAAE,SAAS,EAAE,MAAM,2BAA2B,CAAC;AAEtD,OAAO,EAAE,QAAQ,EAAE,MAAM,0BAA0B,CAAC;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAG5D,MAAM,UAAU,qBAAqB,CAA4B,KAAa,EAAE,GAA0B,EAAE,SAAmD,EAAE,UAAqH;IAClR,IAAI,OAAO,GAAG,CAAC,CAAC;IACR,IAAA,KAAK,GAAK,GAAG,MAAR,CAAS;IACtB,IAAM,OAAO,GAAG,IAAI,OAAO,EAAU,CAAC;IACtC,IAAM,aAAa,GAAG,IAAI,cAAc,CAAC,aAAa,EAAE,CAAC;IACzD,IAAM,UAAU,GAAG,iBAAiB,EAAE,CAAC;IACvC,IAAM,aAAa,GAA2B,EAAE,CAAC;IACjD,IAAM,MAAM,GAAG,mCAAmC,CAAC,MAAM,EAAE,CAAC;IAC5D,IAAI,MAAoC,CAAC;IAEzC,IAAI,UAAqB,CAAC;IAC1B,IAAI,OAAU,CAAC;IACf,IAAI,MAAoB,CAAC;IACzB,IAAI,MAAM,GAAG,KAAK,CAAC,WAAW,EAAE,CAAC;IAEjC,SAAS,cAAc,CAAC,KAAiC,EAAE,SAAqB;QAAhF,iBAgCC;QAhCuB,sBAAA,EAAA,UAAiC;QACrD,IAAI,SAAS,IAAI,SAAS,KAAK,UAAU,EAAE;YACvC,OAAO,GAAG,SAAS,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;YACpC,UAAU,GAAG,SAAS,CAAC;YACvB,IAAI,CAAC,MAAM;gBAAE,MAAM,GAAG,EAAE,CAAC,gBAAgB,CAAC,OAAO,CAAC,CAAC;SACtD;QACD,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;QAE1C,OAAO,IAAI,CAAC,MAAM,CAAC,4CAA4C,EAAE,UAAM,OAAO;;;;;;wBACtE,SAAS,GAAG,KAAK,CAAC;wBACtB,IAAI,CAAC,MAAM,EAAE;4BACT,MAAM,GAAG,UAAU,CAAC,UAAU,EAAE,UAAU,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;4BAC3D,SAAS,GAAG,IAAI,CAAC;yBACpB;6BAAM,IAAI,MAAA,MAAM,CAAC,YAAY,+CAAnB,MAAM,EAAgB,UAAU,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE;4BACzD,MAAM,CAAC,OAAO,EAAE,CAAC;4BACjB,MAAM,GAAG,UAAU,CAAC,UAAU,EAAE,UAAU,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;4BAC3D,SAAS,GAAG,IAAI,CAAC;yBACpB;wBACK,OAAO,GAAG,MAAM,CAAC,cAAc,CAAC,EAAE,KAAK,OAAA,EAAE,OAAO,SAAA,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,SAAS,CAAC,CAAC;6BACjF,OAAO,EAAP,wBAAO;wBAAE,qBAAM,OAAO,EAAA;;wBAAb,SAAa,CAAC;;;wBAC3B,IAAI,SAAS;4BAAE,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,+BAA+B;wBAChE,+BAA+B;wBAC/B,aAAa,CAAC,MAAM,GAAG,CAAC,CAAC;wBACzB,IAAI,MAAM,IAAI,MAAM,CAAC,YAAY,EAAE;4BAC/B,aAAa,CAAC,IAAI,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;4BACxC,aAAa,CAAC,GAAG,CAAC,MAAM,CAAC,YAAY,CAAC,EAAE,EAAE,MAAM,CAAC,eAAe,CAAC,CAAC;yBACrE;wBACD,aAAa,CAAC,QAAQ,EAAE,CAAC;wBACzB,oBAAoB;wBACpB,OAAO,IAAI,CAAC,CAAC;wBACb,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;;;;aACzB,CAAC,CAAC;IACP,CAAC;IAED,SAAS,OAAO,CAAC,SAAqB;QAClC,IAAI,SAAS,KAAK,SAAS;YAAE,OAAO,SAAS,CAAC,IAAI,CAAC,UAAU,CAAC,MAAM,CAAC,CAAC;QACtE,OAAO,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;IAC1D,CAAC;IAED,SAAS,IAAI,CAAC,IAAU,EAAE,MAAoB;QAC1C,IAAI,CAAC,UAAU;YAAE,OAAO,KAAK,CAAC;QAC9B,IAAI,CAAC,aAAa,CAAC,EAAE,CAAC,MAAM,CAAC,aAAa,EAAE,MAAM,CAAC;YAAE,OAAO,KAAK,CAAC;QAClE,IAAI,SAAS,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,gBAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,IAAI,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE;YAC/E,IAAI,CAAC,SAAS,CAAC,kBAAkB,CAAC,IAAI,CAAC,SAAS,EAAE,UAAU,CAAC;gBAAE,OAAO,KAAK,CAAC;YAC5E,qEAAqE;YACrE,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,UAAU,CAAC,CAAC;YACpC,IAAI,gBAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,IAAI,gBAAgB,CAAC,IAAI,CAAC,gBAAgB,CAAC,IAAI,CAAC,EAAE;gBAChF,8DAA8D;gBAC9D,IAAI,GAAG,SAAS,CAAC;aACpB;SACJ;aAAM,IAAI,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,EAAE;YAChD,OAAO,KAAK,CAAC;SAChB;QACD,IAAI,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC;YAAE,OAAO,KAAK,CAAC;QACrC,OAAO,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;IACtD,CAAC;IAED,SAAS,QAAQ,CAAC,KAA4C;QAC1D,mCAAmC,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;QAE1D,IAAI,KAAK,CAAC,OAAO,KAAK,SAAS,IAAI,MAAM,EAAE;YACvC,+DAA+D;YAC/D,MAAM,CAAC,aAAa,CAAC,KAAK,CAAC,OAAO,IAAI,CAAC,MAAM,CAAC,cAAc,KAAK,IAAI,IAAI,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,CAAC,CAAC;SAC/G;QACD,IAAI,KAAK,CAAC,WAAW,KAAK,SAAS,IAAI,MAAM;YAAE,MAAM,CAAC,cAAc,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC;QACxF,IAAI,KAAK,CAAC,QAAQ,KAAK,SAAS,IAAI,MAAM;YAAE,MAAM,CAAC,WAAW,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC;QAC/E,IAAI,KAAK,CAAC,SAAS,KAAK,SAAS,IAAI,MAAM,EAAE;YACzC,gEAAgE;YAChE,IAAM,iBAAiB,GAAG,SAAS,CAAC,KAAK,CAAC,KAAK,CAAC,SAAS,EAAE,UAAU,CAAC,CAAC;YACvE,MAAM,CAAC,YAAY,CAAC,iBAAiB,EAAE,KAAK,CAAC,CAAC;SACjD;QACD,IAAI,KAAK,CAAC,YAAY,KAAK,SAAS,IAAI,MAAM,EAAE;YAC5C,gEAAgE;YAChE,IAAM,oBAAoB,GAAG,YAAY,CAAC,KAAK,CAAC,KAAK,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;YAChF,MAAM,CAAC,eAAe,CAAC,oBAAoB,EAAE,KAAK,CAAC,CAAC;SACvD;QACD,IAAI,KAAK,CAAC,QAAQ,KAAK,SAAS,IAAI,MAAM,EAAE;YACxC,gEAAgE;YAChE,IAAM,gBAAgB,GAAG,QAAQ,CAAC,KAAK,CAAC,KAAK,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;YACpE,MAAM,CAAC,WAAW,CAAC,gBAAgB,CAAC,CAAC;SACxC;QACD,IAAI,KAAK,CAAC,SAAS,KAAK,SAAS,IAAI,MAAM;YAAE,MAAM,CAAC,YAAY,CAAC,KAAK,CAAC,SAAS,CAAC,CAAC;QAClF,IAAI,KAAK,CAAC,cAAc,KAAK,SAAS,IAAI,MAAM,EAAE;YAC9C,gFAAgF;YAChF,iFAAiF;YACjF,6DAA6D;YAC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@@ -40,7 +40,7 @@ interface ComplexVisualGeometryBuilder<P extends StructureParams, G extends Geom
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}
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export declare function ComplexVisual<G extends Geometry, P extends StructureParams & Geometry.Params<G>>(builder: ComplexVisualGeometryBuilder<P, G>, materialId: number): ComplexVisual<P>;
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export declare const ComplexMeshParams: {
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -55,7 +55,7 @@ export interface ComplexMeshVisualBuilder<P extends ComplexMeshParams> extends C
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}
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export declare function ComplexMeshVisual<P extends ComplexMeshParams>(builder: ComplexMeshVisualBuilder<P>, materialId: number): ComplexVisual<P>;
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export declare const ComplexCylindersParams: {
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unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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@@ -70,7 +70,7 @@ export interface ComplexCylindersVisualBuilder<P extends ComplexCylindersParams>
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}
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export declare function ComplexCylindersVisual<P extends ComplexCylindersParams>(builder: ComplexCylindersVisualBuilder<P>, materialId: number): ComplexVisual<P>;
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export declare const ComplexLinesParams: {
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unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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lineSizeAttenuation: PD.BooleanParam;
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@@ -82,7 +82,7 @@ export interface ComplexLinesVisualBuilder<P extends ComplexLinesParams> extends
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}
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export declare function ComplexLinesVisual<P extends ComplexLinesParams>(builder: ComplexLinesVisualBuilder<P>, materialId: number): ComplexVisual<P>;
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export declare const ComplexTextParams: {
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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borderWidth: PD.Numeric;
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@@ -111,7 +111,7 @@ export interface ComplexTextVisualBuilder<P extends ComplexTextParams> extends C
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}
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export declare function ComplexTextVisual<P extends ComplexTextParams>(builder: ComplexTextVisualBuilder<P>, materialId: number): ComplexVisual<P>;
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export declare const ComplexDirectVolumeParams: {
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -144,7 +144,7 @@ export interface ComplexDirectVolumeVisualBuilder<P extends ComplexDirectVolumeP
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}
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export declare function ComplexDirectVolumeVisual<P extends ComplexDirectVolumeParams>(builder: ComplexDirectVolumeVisualBuilder<P>, materialId: number): ComplexVisual<P>;
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export declare const ComplexTextureMeshParams: {
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -48,6 +48,7 @@ export function ComplexVisual(builder, materialId) {
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48
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|
var currentTheme = Theme.createEmpty();
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|
var currentStructure;
|
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50
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|
var geometry;
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51
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+
var geometryVersion = -1;
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51
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|
var locationIt;
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52
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|
var positionIt;
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53
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|
function prepareUpdate(theme, props, structure) {
|
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@@ -138,8 +139,10 @@ export function ComplexVisual(builder, materialId) {
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138
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currentProps = newProps;
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|
currentTheme = newTheme;
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currentStructure = newStructure;
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|
-
if (newGeometry)
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|
+
if (newGeometry) {
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geometry = newGeometry;
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144
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+
geometryVersion += 1;
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+
}
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}
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147
|
function lociIsSuperset(loci) {
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145
148
|
if (isEveryLoci(loci))
|
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@@ -168,6 +171,7 @@ export function ComplexVisual(builder, materialId) {
|
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return {
|
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|
get groupCount() { return locationIt ? locationIt.count : 0; },
|
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|
get renderObject() { return locationIt && locationIt.count ? renderObject : undefined; },
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+
get geometryVersion() { return geometryVersion; },
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|
createOrUpdate: function (ctx, theme, props, structure) {
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if (props === void 0) { props = {}; }
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prepareUpdate(theme, props, structure || currentStructure);
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@@ -207,11 +211,13 @@ export function ComplexVisual(builder, materialId) {
|
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207
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|
setTransform: function (matrix, instanceMatrices) {
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Visual.setTransform(renderObject, matrix, instanceMatrices);
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|
},
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|
210
|
-
setOverpaint: function (overpaint) {
|
|
211
|
-
|
|
214
|
+
setOverpaint: function (overpaint, webgl) {
|
|
215
|
+
var smoothing = { geometry: geometry, props: currentProps, webgl: webgl };
|
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216
|
+
Visual.setOverpaint(renderObject, overpaint, lociApply, true, smoothing);
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|
},
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213
|
-
setTransparency: function (transparency) {
|
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214
|
-
|
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218
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+
setTransparency: function (transparency, webgl) {
|
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219
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+
var smoothing = { geometry: geometry, props: currentProps, webgl: webgl };
|
|
220
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+
Visual.setTransparency(renderObject, transparency, lociApply, true, smoothing);
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221
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},
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setClipping: function (clipping) {
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217
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Visual.setClipping(renderObject, clipping, lociApply, true);
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@@ -1 +1 @@
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1
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-
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1
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+
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,uBACb,OAAO,KACV,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAsB,EAAE,YAA0B,EAAE,QAAe,EAAE,YAAmB,EAAE,YAAuB,EAAE,gBAA2B;YACrL,OAAO,CAAC,cAAc,CAAC,KAAK,EAAE,QAAQ,EAAE,YAAY,EAAE,QAAQ,EAAE,YAAY,EAAE,YAAY,EAAE,gBAAgB,CAAC,CAAC;YAC9G,IAAI,CAAC,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,UAAU,GAAG,IAAI,CAAC;QACvF,CAAC,EACD,aAAa,EAAE,KAAK,CAAC,KAAK,KAC3B,UAAU,CAAC,CAAC;AACnB,CAAC;AAED,OAAO;AAEP,MAAM,CAAC,IAAM,iBAAiB,yBAAQ,mBAAmB,GAAK,eAAe,CAAE,CAAC;AAKhF,MAAM,UAAU,iBAAiB,CAA8B,OAAoC,EAAE,UAAkB;IACnH,OAAO,aAAa,uBACb,OAAO,KACV,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAsB,EAAE,YAA0B,EAAE,QAAe,EAAE,YAAmB,EAAE,YAAuB,EAAE,gBAA2B;YACrL,OAAO,CAAC,cAAc,CAAC,KAAK,EAAE,QAAQ,EAAE,YAAY,EAAE,QAAQ,EAAE,YAAY,EAAE,YAAY,EAAE,gBAAgB,CAAC,CAAC;YAC9G,IAAI,CAAC,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,UAAU,GAAG,IAAI,CAAC;YACnF,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACjF,IAAI,QAAQ,CAAC,gBAAgB,KAAK,YAAY,CAAC,gBAAgB;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAC7F,IAAI,QAAQ,CAAC,MAAM,KAAK,YAAY,CAAC,MAAM;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACzE,IAAI,QAAQ,CAAC,YAAY,KAAK,YAAY,CAAC,YAAY;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACrF,IAAI,QAAQ,CAAC,eAAe,KAAK,YAAY,CAAC,eAAe;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAC3F,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAEjF,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACjF,IAAI,QAAQ,CAAC,WAAW,KAAK,YAAY,CAAC,WAAW;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACnF,IAAI,QAAQ,CAAC,SAAS,KAAK,YAAY,CAAC,SAAS;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAC/E,IAAI,QAAQ,CAAC,WAAW,KAAK,YAAY,CAAC,WAAW;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACnF,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;QACrF,CAAC,EACD,aAAa,EAAE,IAAI,CAAC,KAAK,KAC1B,UAAU,CAAC,CAAC;AACnB,CAAC;AAED,gBAAgB;AAEhB,MAAM,CAAC,IAAM,yBAAyB,yBAAQ,2BAA2B,GAAK,eAAe,CAAE,CAAC;AAKhG,MAAM,UAAU,yBAAyB,CAAsC,OAA4C,EAAE,UAAkB;IAC3I,OAAO,aAAa,uBACb,OAAO,KACV,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAsB,EAAE,YAA0B,EAAE,QAAe,EAAE,YAAmB,EAAE,YAAuB,EAAE,gBAA2B;YACrL,OAAO,CAAC,cAAc,CAAC,KAAK,EAAE,QAAQ,EAAE,YAAY,EAAE,QAAQ,EAAE,YAAY,EAAE,YAAY,EAAE,gBAAgB,CAAC,CAAC;YAC9G,IAAI,CAAC,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;QAC3F,CAAC,EACD,aAAa,EAAE,YAAY,CAAC,KAAK,KAClC,UAAU,CAAC,CAAC;AACnB,CAAC;AAED,eAAe;AAEf,MAAM,CAAC,IAAM,wBAAwB,yBAAQ,0BAA0B,GAAK,eAAe,CAAE,CAAC;AAK9F,MAAM,UAAU,wBAAwB,CAAqC,OAA2C,EAAE,UAAkB;IACxI,OAAO,aAAa,uBACb,OAAO,KACV,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAsB,EAAE,YAA0B,EAAE,QAAe,EAAE,YAAmB,EAAE,YAAuB,EAAE,gBAA2B;YACrL,OAAO,CAAC,cAAc,CAAC,KAAK,EAAE,QAAQ,EAAE,YAAY,EAAE,QAAQ,EAAE,YAAY,EAAE,YAAY,EAAE,gBAAgB,CAAC,CAAC;YAC9G,IAAI,CAAC,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;QAC3F,CAAC,EACD,aAAa,EAAE,WAAW,CAAC,KAAK,KACjC,UAAU,CAAC,CAAC;AACnB,CAAC"}
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@@ -6,9 +6,9 @@
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6
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*/
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7
7
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import { ParamDefinition as PD } from '../../mol-util/param-definition';
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8
8
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import { UnitKind } from './visual/util/common';
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9
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-
export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"
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9
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+
export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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10
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export declare const StructureParams: {
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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};
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export declare type StructureParams = typeof StructureParams;
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@@ -14,7 +14,7 @@ export declare namespace StructureRepresentationRegistry {
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14
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cartoon: import("./representation").StructureRepresentationProvider<{
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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17
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-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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18
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -28,7 +28,7 @@ export declare namespace StructureRepresentationRegistry {
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aspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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29
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arrowFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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tubularHelices: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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31
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-
helixProfile: import("../../mol-util/param-definition").ParamDefinition.Select<"
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31
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+
helixProfile: import("../../mol-util/param-definition").ParamDefinition.Select<"elliptical" | "rounded" | "square">;
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32
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linearSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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33
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}, "cartoon">;
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34
34
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backbone: import("./representation").StructureRepresentationProvider<{
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@@ -36,7 +36,7 @@ export declare namespace StructureRepresentationRegistry {
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36
36
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
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37
37
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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38
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radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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39
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-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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39
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+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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40
40
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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41
41
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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42
42
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -50,7 +50,7 @@ export declare namespace StructureRepresentationRegistry {
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50
50
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}, "backbone">;
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51
51
|
'ball-and-stick': import("./representation").StructureRepresentationProvider<{
|
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52
52
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
53
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
|
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53
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
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54
54
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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55
55
|
sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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56
56
|
visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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@@ -96,7 +96,7 @@ export declare namespace StructureRepresentationRegistry {
|
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|
96
96
|
dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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97
97
|
stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
98
98
|
radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
99
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
|
|
99
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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100
100
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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101
101
|
doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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102
102
|
flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -112,7 +112,7 @@ export declare namespace StructureRepresentationRegistry {
|
|
|
112
112
|
ellipsoid: import("./representation").StructureRepresentationProvider<{
|
|
113
113
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
114
114
|
adjustCylinderLength: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
115
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
|
|
115
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
116
116
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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radiusOffset: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
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chainScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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residueScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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elementScale: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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borderWidth: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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@@ -235,7 +235,7 @@ export declare namespace StructureRepresentationRegistry {
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
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lineSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -263,7 +263,7 @@ export declare namespace StructureRepresentationRegistry {
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probeRadius: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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resolution: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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probePositions: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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lineSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
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@@ -281,7 +281,7 @@ export declare namespace StructureRepresentationRegistry {
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"orientation-ellipsoid-mesh">;
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -295,7 +295,7 @@ export declare namespace StructureRepresentationRegistry {
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pointSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"square" | "circle" | "fuzzy">;
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@@ -306,7 +306,7 @@ export declare namespace StructureRepresentationRegistry {
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-tube">;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
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@@ -324,7 +324,7 @@ export declare namespace StructureRepresentationRegistry {
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ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -26,7 +26,7 @@ var StructureRepresentationRegistry = /** @class */ (function (_super) {
|
|
|
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26
|
var _this = _super.call(this) || this;
|
|
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|
objectForEach(StructureRepresentationRegistry.BuiltIn, function (p, k) {
|
|
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|
if (p.name !== k)
|
|
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|
-
throw new Error("Fix BuiltInStructureRepresentations to have matching names. "
|
|
29
|
+
throw new Error("Fix BuiltInStructureRepresentations to have matching names. ".concat(p.name, " ").concat(k));
|
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_this.add(p);
|
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});
|
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return _this;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"registry.js","sourceRoot":"","sources":["../../../src/mol-repr/structure/registry.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,aAAa,EAAE,MAAM,uBAAuB,CAAC;AACtD,OAAO,EAAE,sBAAsB,EAA0B,MAAM,mBAAmB,CAAC;AAEnF,OAAO,EAAE,kCAAkC,EAAE,MAAM,iCAAiC,CAAC;AACrF,OAAO,EAAE,kCAAkC,EAAE,MAAM,+BAA+B,CAAC;AACnF,OAAO,EAAE,6BAA6B,EAAE,MAAM,0BAA0B,CAAC;AACzE,OAAO,EAAE,+BAA+B,EAAE,MAAM,4BAA4B,CAAC;AAC7E,OAAO,EAAE,qCAAqC,EAAE,MAAM,mCAAmC,CAAC;AAC1F,OAAO,EAAE,2BAA2B,EAAE,MAAM,wBAAwB,CAAC;AACrE,OAAO,EAAE,sCAAsC,EAAE,MAAM,oCAAoC,CAAC;AAC5F,OAAO,EAAE,iCAAiC,EAAE,MAAM,8BAA8B,CAAC;AACjF,OAAO,EAAE,2BAA2B,EAAE,MAAM,wBAAwB,CAAC;AACrE,OAAO,EAAE,2BAA2B,EAAE,MAAM,wBAAwB,CAAC;AACrE,OAAO,EAAE,+BAA+B,EAAE,MAAM,4BAA4B,CAAC;AAC7E,OAAO,EAAE,0BAA0B,EAAE,MAAM,uBAAuB,CAAC;AACnE,OAAO,EAAE,oCAAoC,EAAE,MAAM,kCAAkC,CAAC;AACxF,OAAO,EAAE,8BAA8B,EAAE,MAAM,2BAA2B,CAAC;AAE3E;IAAqD,mDAA+D;IAChH;QAAA,YACI,iBAAO,SAKV;QAJG,aAAa,CAAC,+BAA+B,CAAC,OAAO,EAAE,UAAC,CAAC,EAAE,CAAC;YACxD,IAAI,CAAC,CAAC,IAAI,KAAK,CAAC;gBAAE,MAAM,IAAI,KAAK,CAAC,
|
|
1
|
+
{"version":3,"file":"registry.js","sourceRoot":"","sources":["../../../src/mol-repr/structure/registry.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,aAAa,EAAE,MAAM,uBAAuB,CAAC;AACtD,OAAO,EAAE,sBAAsB,EAA0B,MAAM,mBAAmB,CAAC;AAEnF,OAAO,EAAE,kCAAkC,EAAE,MAAM,iCAAiC,CAAC;AACrF,OAAO,EAAE,kCAAkC,EAAE,MAAM,+BAA+B,CAAC;AACnF,OAAO,EAAE,6BAA6B,EAAE,MAAM,0BAA0B,CAAC;AACzE,OAAO,EAAE,+BAA+B,EAAE,MAAM,4BAA4B,CAAC;AAC7E,OAAO,EAAE,qCAAqC,EAAE,MAAM,mCAAmC,CAAC;AAC1F,OAAO,EAAE,2BAA2B,EAAE,MAAM,wBAAwB,CAAC;AACrE,OAAO,EAAE,sCAAsC,EAAE,MAAM,oCAAoC,CAAC;AAC5F,OAAO,EAAE,iCAAiC,EAAE,MAAM,8BAA8B,CAAC;AACjF,OAAO,EAAE,2BAA2B,EAAE,MAAM,wBAAwB,CAAC;AACrE,OAAO,EAAE,2BAA2B,EAAE,MAAM,wBAAwB,CAAC;AACrE,OAAO,EAAE,+BAA+B,EAAE,MAAM,4BAA4B,CAAC;AAC7E,OAAO,EAAE,0BAA0B,EAAE,MAAM,uBAAuB,CAAC;AACnE,OAAO,EAAE,oCAAoC,EAAE,MAAM,kCAAkC,CAAC;AACxF,OAAO,EAAE,8BAA8B,EAAE,MAAM,2BAA2B,CAAC;AAE3E;IAAqD,mDAA+D;IAChH;QAAA,YACI,iBAAO,SAKV;QAJG,aAAa,CAAC,+BAA+B,CAAC,OAAO,EAAE,UAAC,CAAC,EAAE,CAAC;YACxD,IAAI,CAAC,CAAC,IAAI,KAAK,CAAC;gBAAE,MAAM,IAAI,KAAK,CAAC,sEAA+D,CAAC,CAAC,IAAI,cAAI,CAAC,CAAE,CAAC,CAAC;YAChH,KAAI,CAAC,GAAG,CAAC,CAAQ,CAAC,CAAC;QACvB,CAAC,CAAC,CAAC;;IACP,CAAC;IACL,sCAAC;AAAD,CAAC,AARD,CAAqD,sBAAsB,GAQ1E;;AAED,WAAiB,+BAA+B;IAC/B,uCAAO,GAAG;QACnB,SAAS,EAAE,6BAA6B;QACxC,UAAU,EAAE,8BAA8B;QAC1C,gBAAgB,EAAE,kCAAkC;QACpD,cAAc,EAAE,kCAAkC;QAClD,WAAW,EAAE,+BAA+B;QAC5C,kBAAkB,EAAE,qCAAqC;QACzD,iBAAiB,EAAE,oCAAoC;QACvD,OAAO,EAAE,2BAA2B;QACpC,MAAM,EAAE,0BAA0B;QAClC,mBAAmB,EAAE,sCAAsC;QAC3D,aAAa,EAAE,iCAAiC;QAChD,OAAO,EAAE,2BAA2B;QACpC,OAAO,EAAE,2BAA2B;QACpC,WAAW,EAAE,+BAA+B;KAC/C,CAAC;AAKN,CAAC,EArBgB,+BAA+B,KAA/B,+BAA+B,QAqB/C"}
|
|
@@ -13,7 +13,7 @@ export declare const BackboneParams: {
|
|
|
13
13
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
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14
|
sizeFactor: PD.Numeric;
|
|
15
15
|
radialSegments: PD.Numeric;
|
|
16
|
-
unitKinds: PD.MultiSelect<"
|
|
16
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
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17
|
includeParent: PD.BooleanParam;
|
|
18
18
|
doubleSided: PD.BooleanParam;
|
|
19
19
|
flipSided: PD.BooleanParam;
|
|
@@ -31,7 +31,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
|
|
|
31
31
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
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|
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|
|
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|
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|
|
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|
-
unitKinds: PD.MultiSelect<"
|
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34
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
35
35
|
includeParent: PD.BooleanParam;
|
|
36
36
|
doubleSided: PD.BooleanParam;
|
|
37
37
|
flipSided: PD.BooleanParam;
|
|
@@ -50,7 +50,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
|
|
|
50
50
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
51
51
|
sizeFactor: PD.Numeric;
|
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52
|
radialSegments: PD.Numeric;
|
|
53
|
-
unitKinds: PD.MultiSelect<"
|
|
53
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
54
54
|
includeParent: PD.BooleanParam;
|
|
55
55
|
doubleSided: PD.BooleanParam;
|
|
56
56
|
flipSided: PD.BooleanParam;
|
|
@@ -10,7 +10,7 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
|
|
|
10
10
|
import { Structure } from '../../../mol-model/structure';
|
|
11
11
|
export declare const BallAndStickParams: {
|
|
12
12
|
includeParent: PD.BooleanParam;
|
|
13
|
-
unitKinds: PD.MultiSelect<"
|
|
13
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
14
14
|
sizeFactor: PD.Numeric;
|
|
15
15
|
sizeAspectRatio: PD.Numeric;
|
|
16
16
|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -45,7 +45,7 @@ export declare const BallAndStickParams: {
|
|
|
45
45
|
export declare type BallAndStickParams = typeof BallAndStickParams;
|
|
46
46
|
export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structure: Structure): {
|
|
47
47
|
includeParent: PD.BooleanParam;
|
|
48
|
-
unitKinds: PD.MultiSelect<"
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|
48
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
49
49
|
sizeFactor: PD.Numeric;
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|
50
50
|
sizeAspectRatio: PD.Numeric;
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|
51
51
|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -81,7 +81,7 @@ export declare type BallAndStickRepresentation = StructureRepresentation<BallAnd
|
|
|
81
81
|
export declare function BallAndStickRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, BallAndStickParams>): BallAndStickRepresentation;
|
|
82
82
|
export declare const BallAndStickRepresentationProvider: StructureRepresentationProvider<{
|
|
83
83
|
includeParent: PD.BooleanParam;
|
|
84
|
-
unitKinds: PD.MultiSelect<"
|
|
84
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
85
85
|
sizeFactor: PD.Numeric;
|
|
86
86
|
sizeAspectRatio: PD.Numeric;
|
|
87
87
|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -22,7 +22,7 @@ export declare const CarbohydrateParams: {
|
|
|
22
22
|
dashCap: PD.BooleanParam;
|
|
23
23
|
stubCap: PD.BooleanParam;
|
|
24
24
|
radialSegments: PD.Numeric;
|
|
25
|
-
unitKinds: PD.MultiSelect<"
|
|
25
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
26
26
|
includeParent: PD.BooleanParam;
|
|
27
27
|
doubleSided: PD.BooleanParam;
|
|
28
28
|
flipSided: PD.BooleanParam;
|
|
@@ -50,7 +50,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
|
|
|
50
50
|
dashCap: PD.BooleanParam;
|
|
51
51
|
stubCap: PD.BooleanParam;
|
|
52
52
|
radialSegments: PD.Numeric;
|
|
53
|
-
unitKinds: PD.MultiSelect<"
|
|
53
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
54
54
|
includeParent: PD.BooleanParam;
|
|
55
55
|
doubleSided: PD.BooleanParam;
|
|
56
56
|
flipSided: PD.BooleanParam;
|
|
@@ -79,7 +79,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
|
|
|
79
79
|
dashCap: PD.BooleanParam;
|
|
80
80
|
stubCap: PD.BooleanParam;
|
|
81
81
|
radialSegments: PD.Numeric;
|
|
82
|
-
unitKinds: PD.MultiSelect<"
|
|
82
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
83
83
|
includeParent: PD.BooleanParam;
|
|
84
84
|
doubleSided: PD.BooleanParam;
|
|
85
85
|
flipSided: PD.BooleanParam;
|
|
@@ -11,7 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../rep
|
|
|
11
11
|
export declare const CartoonParams: {
|
|
12
12
|
sizeFactor: PD.Numeric;
|
|
13
13
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
14
|
-
unitKinds: PD.MultiSelect<"
|
|
14
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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15
15
|
includeParent: PD.BooleanParam;
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16
16
|
doubleSided: PD.BooleanParam;
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17
17
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flipSided: PD.BooleanParam;
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@@ -25,14 +25,14 @@ export declare const CartoonParams: {
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25
25
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aspectRatio: PD.Numeric;
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26
26
|
arrowFactor: PD.Numeric;
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27
27
|
tubularHelices: PD.BooleanParam;
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|
28
|
-
helixProfile: PD.Select<"
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|
28
|
+
helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
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29
29
|
linearSegments: PD.Numeric;
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30
30
|
};
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31
31
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export declare type CartoonParams = typeof CartoonParams;
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32
32
|
export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: Structure): {
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33
33
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sizeFactor: PD.Numeric;
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34
34
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
35
|
-
unitKinds: PD.MultiSelect<"
|
|
35
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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|
36
36
|
includeParent: PD.BooleanParam;
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|
37
37
|
doubleSided: PD.BooleanParam;
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|
38
38
|
flipSided: PD.BooleanParam;
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@@ -46,7 +46,7 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
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46
46
|
aspectRatio: PD.Numeric;
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|
47
47
|
arrowFactor: PD.Numeric;
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|
48
48
|
tubularHelices: PD.BooleanParam;
|
|
49
|
-
helixProfile: PD.Select<"
|
|
49
|
+
helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
|
|
50
50
|
linearSegments: PD.Numeric;
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|
51
51
|
};
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|
52
52
|
export declare type CartoonRepresentation = StructureRepresentation<CartoonParams>;
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|
@@ -54,7 +54,7 @@ export declare function CartoonRepresentation(ctx: RepresentationContext, getPar
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|
54
54
|
export declare const CartoonRepresentationProvider: StructureRepresentationProvider<{
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|
55
55
|
sizeFactor: PD.Numeric;
|
|
56
56
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
57
|
-
unitKinds: PD.MultiSelect<"
|
|
57
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
58
58
|
includeParent: PD.BooleanParam;
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|
59
59
|
doubleSided: PD.BooleanParam;
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|
60
60
|
flipSided: PD.BooleanParam;
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|
@@ -68,6 +68,6 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
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|
|
68
68
|
aspectRatio: PD.Numeric;
|
|
69
69
|
arrowFactor: PD.Numeric;
|
|
70
70
|
tubularHelices: PD.BooleanParam;
|
|
71
|
-
helixProfile: PD.Select<"
|
|
71
|
+
helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
|
|
72
72
|
linearSegments: PD.Numeric;
|
|
73
73
|
}, "cartoon">;
|