npm - molstar - Versions diffs - 2.3.6 → 2.4.0 - Mend

molstar 2.3.6 → 2.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1610) hide show

package/lib/mol-io/common/file-handle.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"file-handle.js","sourceRoot":"","sources":["../../../src/mol-io/common/file-handle.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,QAAQ,EAAE,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAChD,OAAO,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAoC/C,MAAM,KAAW,UAAU,CAuC1B;AAvCD,WAAiB,UAAU;IACvB,SAAgB,UAAU,CAAC,MAAoB,EAAE,IAAY;QACzD,OAAO;YACH,IAAI,MAAA;YACJ,UAAU,EAAE,UAAC,QAAgB,EAAE,YAAmC,EAAE,IAAa,EAAE,UAAmB;gBAClG,IAAI,SAAiB,CAAC;gBACtB,IAAI,SAAuB,CAAC;gBAC5B,IAAI,OAAO,YAAY,KAAK,QAAQ,EAAE;oBAClC,IAAI,GAAG,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,CAAC;oBACpC,IAAM,KAAK,GAAG,QAAQ,CAAC;oBACvB,IAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,GAAG,IAAI,CAAC,CAAC;oBAClD,SAAS,GAAG,GAAG,GAAG,KAAK,CAAC;oBACxB,SAAS,GAAG,YAAY,CAAC,cAAc,CAAC,IAAI,UAAU,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,EAAE,GAAG,GAAG,KAAK,CAAC,CAAC,CAAC;iBAC9F;qBAAM;oBACH,IAAI,GAAG,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,MAAM,CAAC,CAAC;oBAC3C,IAAM,KAAK,GAAG,QAAQ,CAAC;oBACvB,IAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,GAAG,IAAI,CAAC,CAAC;oBAClD,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,KAAK,EAAE,GAAG,CAAC,EAAE,UAAU,CAAC,CAAC;oBAC1D,SAAS,GAAG,GAAG,GAAG,KAAK,CAAC;oBACxB,SAAS,GAAG,YAAY,CAAC;iBAC5B;gBACD,IAAI,IAAI,KAAK,SAAS,EAAE;oBACpB,OAAO,CAAC,IAAI,CAAC,~~eAAa~~,IAAI,~~uBAAkB~~,SAAS,YAAS,CAAC,CAAC;iBACvE;gBACD,OAAO,OAAO,CAAC,OAAO,CAAC,EAAE,SAAS,WAAA,EAAE,MAAM,EAAE,SAAS,EAAE,CAAC,CAAC;YAC7D,CAAC;YACD,WAAW,EAAE,UAAC,QAAgB,EAAE,MAAoB,EAAE,MAAe;gBACjE,MAAM,GAAG,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACzC,OAAO,CAAC,KAAK,CAAC,wDAAwD,CAAC,CAAC;gBACxE,OAAO,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;YAC9B,CAAC;YACD,eAAe,EAAE,UAAC,QAAgB,EAAE,MAAoB,EAAE,MAAe;gBACrE,MAAM,GAAG,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACzC,OAAO,CAAC,KAAK,CAAC,sDAAsD,CAAC,CAAC;gBACtE,OAAO,CAAC,CAAC;YACb,CAAC;YACD,KAAK,EAAE,IAAI;SACd,CAAC;IACN,CAAC;IArCe,qBAAU,aAqCzB,CAAA;AACL,CAAC,EAvCgB,UAAU,KAAV,UAAU,QAuC1B"}
1	+ {"version":3,"file":"file-handle.js","sourceRoot":"","sources":["../../../src/mol-io/common/file-handle.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,QAAQ,EAAE,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAChD,OAAO,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAoC/C,MAAM,KAAW,UAAU,CAuC1B;AAvCD,WAAiB,UAAU;IACvB,SAAgB,UAAU,CAAC,MAAoB,EAAE,IAAY;QACzD,OAAO;YACH,IAAI,MAAA;YACJ,UAAU,EAAE,UAAC,QAAgB,EAAE,YAAmC,EAAE,IAAa,EAAE,UAAmB;gBAClG,IAAI,SAAiB,CAAC;gBACtB,IAAI,SAAuB,CAAC;gBAC5B,IAAI,OAAO,YAAY,KAAK,QAAQ,EAAE;oBAClC,IAAI,GAAG,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,CAAC;oBACpC,IAAM,KAAK,GAAG,QAAQ,CAAC;oBACvB,IAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,GAAG,IAAI,CAAC,CAAC;oBAClD,SAAS,GAAG,GAAG,GAAG,KAAK,CAAC;oBACxB,SAAS,GAAG,YAAY,CAAC,cAAc,CAAC,IAAI,UAAU,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,EAAE,GAAG,GAAG,KAAK,CAAC,CAAC,CAAC;iBAC9F;qBAAM;oBACH,IAAI,GAAG,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,MAAM,CAAC,CAAC;oBAC3C,IAAM,KAAK,GAAG,QAAQ,CAAC;oBACvB,IAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,EAAE,KAAK,GAAG,IAAI,CAAC,CAAC;oBAClD,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,KAAK,EAAE,GAAG,CAAC,EAAE,UAAU,CAAC,CAAC;oBAC1D,SAAS,GAAG,GAAG,GAAG,KAAK,CAAC;oBACxB,SAAS,GAAG,YAAY,CAAC;iBAC5B;gBACD,IAAI,IAAI,KAAK,SAAS,EAAE;oBACpB,OAAO,CAAC,IAAI,CAAC,oBAAa,IAAI,4BAAkB,SAAS,YAAS,CAAC,CAAC;iBACvE;gBACD,OAAO,OAAO,CAAC,OAAO,CAAC,EAAE,SAAS,WAAA,EAAE,MAAM,EAAE,SAAS,EAAE,CAAC,CAAC;YAC7D,CAAC;YACD,WAAW,EAAE,UAAC,QAAgB,EAAE,MAAoB,EAAE,MAAe;gBACjE,MAAM,GAAG,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACzC,OAAO,CAAC,KAAK,CAAC,wDAAwD,CAAC,CAAC;gBACxE,OAAO,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;YAC9B,CAAC;YACD,eAAe,EAAE,UAAC,QAAgB,EAAE,MAAoB,EAAE,MAAe;gBACrE,MAAM,GAAG,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACzC,OAAO,CAAC,KAAK,CAAC,sDAAsD,CAAC,CAAC;gBACtE,OAAO,CAAC,CAAC;YACb,CAAC;YACD,KAAK,EAAE,IAAI;SACd,CAAC;IACN,CAAC;IArCe,qBAAU,aAqCzB,CAAA;AACL,CAAC,EAvCgB,UAAU,KAAV,UAAU,QAuC1B"}

package/lib/mol-io/common/typed-array.d.ts CHANGED Viewed

@@ -25,6 +25,6 @@ export interface TypedArrayBufferContext {
 }
 export declare function getElementByteSize(type: TypedArrayValueType): 1 | 2 | 4;
 export declare function makeTypedArray(type: TypedArrayValueType, buffer: ArrayBuffer, byteOffset?: number, length?: number): TypedArrayValueArray;
-export declare function createTypedArray(type: TypedArrayValueType, size: number): Int8Array | Int16Array | Uint16Array | Float32Array;
+export declare function createTypedArray(type: TypedArrayValueType, size: number): Float32Array | Uint16Array | Int8Array | Int16Array;
 export declare function createTypedArrayBufferContext(size: number, type: TypedArrayValueType): TypedArrayBufferContext;
 export declare function readTypedArray(ctx: TypedArrayBufferContext, file: FileHandle, position: number, byteCount: number, valueByteOffset: number, littleEndian?: boolean): Promise<TypedArrayValueArray>;

package/lib/mol-io/common/typed-array.js CHANGED Viewed

@@ -41,7 +41,7 @@ export function createTypedArray(type, size) {
         case TypedArrayValueType.Int16: return new Int16Array(new ArrayBuffer(2 * size));
         case TypedArrayValueType.Uint16: return new Uint16Array(new ArrayBuffer(2 * size));
     }
-    throw Error(type + " is not a supported value format.");
+    throw Error("".concat(type, " is not a supported value format."));
 }
 export function createTypedArrayBufferContext(size, type) {
     var elementByteSize = getElementByteSize(type);

package/lib/mol-io/common/typed-array.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"typed-array.js","sourceRoot":"","sources":["../../../src/mol-io/common/typed-array.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;;AAGH,OAAO,EAAE,YAAY,EAAE,MAAM,mCAAmC,CAAC;AAIjE,MAAM,KAAW,mBAAmB,CAKnC;AALD,WAAiB,mBAAmB;IACnB,2BAAO,GAAwB,SAAS,CAAC;IACzC,wBAAI,GAAwB,MAAM,CAAC;IACnC,yBAAK,GAAwB,OAAO,CAAC;IACrC,0BAAM,GAAwB,QAAQ,CAAC;AACxD,CAAC,EALgB,mBAAmB,KAAnB,mBAAmB,QAKnC;AAYD,MAAM,UAAU,kBAAkB,CAAC,IAAyB;IACxD,IAAI,IAAI,KAAK,mBAAmB,CAAC,OAAO;QAAE,OAAO,CAAC,CAAC;IACnD,IAAI,IAAI,KAAK,mBAAmB,CAAC,KAAK;QAAE,OAAO,CAAC,CAAC;IACjD,IAAI,IAAI,KAAK,mBAAmB,CAAC,MAAM;QAAE,OAAO,CAAC,CAAC;IAClD,OAAO,CAAC,CAAC;AACb,CAAC;AAED,MAAM,UAAU,cAAc,CAAC,IAAyB,EAAE,MAAmB,EAAE,UAAc,EAAE,MAAe;IAA/B,2BAAA,EAAA,cAAc;IACzF,IAAI,IAAI,KAAK,mBAAmB,CAAC,OAAO;QAAE,OAAO,IAAI,YAAY,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;IAC9F,IAAI,IAAI,KAAK,mBAAmB,CAAC,KAAK;QAAE,OAAO,IAAI,UAAU,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;IAC1F,IAAI,IAAI,KAAK,mBAAmB,CAAC,MAAM;QAAE,OAAO,IAAI,WAAW,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;IAC5F,OAAO,IAAI,SAAS,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;AACrD,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,IAAyB,EAAE,IAAY;IACpE,QAAQ,IAAI,EAAE;QACV,KAAK,mBAAmB,CAAC,OAAO,CAAC,CAAC,OAAO,IAAI,YAAY,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;QACrF,KAAK,mBAAmB,CAAC,IAAI,CAAC,CAAC,OAAO,IAAI,SAAS,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;QAC/E,KAAK,mBAAmB,CAAC,KAAK,CAAC,CAAC,OAAO,IAAI,UAAU,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;QACjF,KAAK,mBAAmB,CAAC,MAAM,CAAC,CAAC,OAAO,IAAI,WAAW,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;KACtF;IACD,MAAM,KAAK,~~CAAI~~,IAAI,sCAAmC,CAAC,CAAC;AAC5D,CAAC;AAED,MAAM,UAAU,6BAA6B,CAAC,IAAY,EAAE,IAAyB;IACjF,IAAM,eAAe,GAAG,kBAAkB,CAAC,IAAI,CAAC,CAAC;IACjD,IAAM,WAAW,GAAG,IAAI,WAAW,CAAC,eAAe,GAAG,IAAI,CAAC,CAAC;IAC5D,IAAM,UAAU,GAAG,YAAY,CAAC,eAAe,CAAC,WAAW,CAAC,CAAC;IAC7D,IAAM,YAAY,GAAG,YAAY,CAAC,oBAAoB,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,IAAI,WAAW,CAAC,eAAe,GAAG,IAAI,CAAC,CAAC;IAC/G,OAAO;QACH,IAAI,MAAA;QACJ,eAAe,iBAAA;QACf,UAAU,YAAA;QACV,YAAY,EAAE,IAAI,UAAU,CAAC,YAAY,CAAC;QAC1C,MAAM,EAAE,cAAc,CAAC,IAAI,EAAE,YAAY,CAAC;KAC7C,CAAC;AACN,CAAC;AAED,MAAM,UAAgB,cAAc,CAAC,GAA4B,EAAE,IAAgB,EAAE,QAAgB,EAAE,SAAiB,EAAE,eAAuB,EAAE,YAAsB;;;;wBACrK,qBAAM,IAAI,CAAC,UAAU,CAAC,QAAQ,EAAE,GAAG,CAAC,UAAU,EAAE,SAAS,EAAE,eAAe,CAAC,EAAA;;oBAA3E,SAA2E,CAAC;oBAC5E,IAAI,GAAG,CAAC,eAAe,GAAG,CAAC,IAAI,CAAC,CAAC,YAAY,KAAK,KAAK,CAAC,IAAI,YAAY,KAAK,YAAY,CAAC,oBAAoB,CAAC,IAAI,CAAC,YAAY,CAAC,oBAAoB,CAAC,EAAE;wBACpJ,iBAAiB;wBACjB,YAAY,CAAC,aAAa,CAAC,GAAG,CAAC,UAAU,EAAE,GAAG,CAAC,YAAY,EAAE,SAAS,EAAE,GAAG,CAAC,eAAe,EAAE,eAAe,CAAC,CAAC;qBACjH;oBACD,sBAAO,GAAG,CAAC,MAAM,EAAC;;;;CACrB"}
1	+ {"version":3,"file":"typed-array.js","sourceRoot":"","sources":["../../../src/mol-io/common/typed-array.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;;AAGH,OAAO,EAAE,YAAY,EAAE,MAAM,mCAAmC,CAAC;AAIjE,MAAM,KAAW,mBAAmB,CAKnC;AALD,WAAiB,mBAAmB;IACnB,2BAAO,GAAwB,SAAS,CAAC;IACzC,wBAAI,GAAwB,MAAM,CAAC;IACnC,yBAAK,GAAwB,OAAO,CAAC;IACrC,0BAAM,GAAwB,QAAQ,CAAC;AACxD,CAAC,EALgB,mBAAmB,KAAnB,mBAAmB,QAKnC;AAYD,MAAM,UAAU,kBAAkB,CAAC,IAAyB;IACxD,IAAI,IAAI,KAAK,mBAAmB,CAAC,OAAO;QAAE,OAAO,CAAC,CAAC;IACnD,IAAI,IAAI,KAAK,mBAAmB,CAAC,KAAK;QAAE,OAAO,CAAC,CAAC;IACjD,IAAI,IAAI,KAAK,mBAAmB,CAAC,MAAM;QAAE,OAAO,CAAC,CAAC;IAClD,OAAO,CAAC,CAAC;AACb,CAAC;AAED,MAAM,UAAU,cAAc,CAAC,IAAyB,EAAE,MAAmB,EAAE,UAAc,EAAE,MAAe;IAA/B,2BAAA,EAAA,cAAc;IACzF,IAAI,IAAI,KAAK,mBAAmB,CAAC,OAAO;QAAE,OAAO,IAAI,YAAY,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;IAC9F,IAAI,IAAI,KAAK,mBAAmB,CAAC,KAAK;QAAE,OAAO,IAAI,UAAU,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;IAC1F,IAAI,IAAI,KAAK,mBAAmB,CAAC,MAAM;QAAE,OAAO,IAAI,WAAW,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;IAC5F,OAAO,IAAI,SAAS,CAAC,MAAM,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;AACrD,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,IAAyB,EAAE,IAAY;IACpE,QAAQ,IAAI,EAAE;QACV,KAAK,mBAAmB,CAAC,OAAO,CAAC,CAAC,OAAO,IAAI,YAAY,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;QACrF,KAAK,mBAAmB,CAAC,IAAI,CAAC,CAAC,OAAO,IAAI,SAAS,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;QAC/E,KAAK,mBAAmB,CAAC,KAAK,CAAC,CAAC,OAAO,IAAI,UAAU,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;QACjF,KAAK,mBAAmB,CAAC,MAAM,CAAC,CAAC,OAAO,IAAI,WAAW,CAAC,IAAI,WAAW,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC;KACtF;IACD,MAAM,KAAK,CAAC,UAAG,IAAI,sCAAmC,CAAC,CAAC;AAC5D,CAAC;AAED,MAAM,UAAU,6BAA6B,CAAC,IAAY,EAAE,IAAyB;IACjF,IAAM,eAAe,GAAG,kBAAkB,CAAC,IAAI,CAAC,CAAC;IACjD,IAAM,WAAW,GAAG,IAAI,WAAW,CAAC,eAAe,GAAG,IAAI,CAAC,CAAC;IAC5D,IAAM,UAAU,GAAG,YAAY,CAAC,eAAe,CAAC,WAAW,CAAC,CAAC;IAC7D,IAAM,YAAY,GAAG,YAAY,CAAC,oBAAoB,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,IAAI,WAAW,CAAC,eAAe,GAAG,IAAI,CAAC,CAAC;IAC/G,OAAO;QACH,IAAI,MAAA;QACJ,eAAe,iBAAA;QACf,UAAU,YAAA;QACV,YAAY,EAAE,IAAI,UAAU,CAAC,YAAY,CAAC;QAC1C,MAAM,EAAE,cAAc,CAAC,IAAI,EAAE,YAAY,CAAC;KAC7C,CAAC;AACN,CAAC;AAED,MAAM,UAAgB,cAAc,CAAC,GAA4B,EAAE,IAAgB,EAAE,QAAgB,EAAE,SAAiB,EAAE,eAAuB,EAAE,YAAsB;;;;wBACrK,qBAAM,IAAI,CAAC,UAAU,CAAC,QAAQ,EAAE,GAAG,CAAC,UAAU,EAAE,SAAS,EAAE,eAAe,CAAC,EAAA;;oBAA3E,SAA2E,CAAC;oBAC5E,IAAI,GAAG,CAAC,eAAe,GAAG,CAAC,IAAI,CAAC,CAAC,YAAY,KAAK,KAAK,CAAC,IAAI,YAAY,KAAK,YAAY,CAAC,oBAAoB,CAAC,IAAI,CAAC,YAAY,CAAC,oBAAoB,CAAC,EAAE;wBACpJ,iBAAiB;wBACjB,YAAY,CAAC,aAAa,CAAC,GAAG,CAAC,UAAU,EAAE,GAAG,CAAC,YAAY,EAAE,SAAS,EAAE,GAAG,CAAC,eAAe,EAAE,eAAe,CAAC,CAAC;qBACjH;oBACD,sBAAO,GAAG,CAAC,MAAM,EAAC;;;;CACrB"}

package/lib/mol-io/reader/_spec/sdf.spec.js CHANGED Viewed

@@ -1,6 +1,7 @@
 import { __awaiter, __generator } from "tslib";
 import { parseSdf } from '../sdf/parser';
 var SdfString = "\n  Mrv1718007121815122D\n\n  5  4  0  0  0  0            999 V2000\n    0.0000    0.8250    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0\n   -0.8250    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0\n    0.0000   -0.8250    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0\n    0.0000    0.0000    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0\n    0.8250    0.0000    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0\n  4  1  1  0  0  0  0\n  4  2  2  0  0  0  0\n  4  3  1  0  0  0  0\n  4  5  1  0  0  0  0\nM  CHG  3   1  -1   3  -1   5  -1\nM  END\n> <DATABASE_ID>\n0\n\n> <DATABASE_NAME>\ndrugbank\n\n> 5225 <TEST_FIELD>\nwhatever\n\n> <INCHI_IDENTIFIER>\nInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3\n\n> <INCHI_KEY>\nNBIIXXVUZAFLBC-UHFFFAOYSA-K\n\n> <FORMULA>\nO4P\n\n> <MOLECULAR_WEIGHT>\n94.9714\n\n> <EXACT_MASS>\n94.95342\n\n> <JCHEM_ACCEPTOR_COUNT>\n4\n\n> <JCHEM_ATOM_COUNT>\n5\n\n> <JCHEM_AVERAGE_POLARIZABILITY>\n4.932162910070488\n\n> <JCHEM_BIOAVAILABILITY>\n1\n\n> <JCHEM_DONOR_COUNT>\n0\n\n> <JCHEM_FORMAL_CHARGE>\n-3\n\n> <JCHEM_GHOSE_FILTER>\n0\n\n> <JCHEM_IUPAC>\nphosphate\n\n> <JCHEM_LOGP>\n-1.0201038226666665\n\n> <JCHEM_MDDR_LIKE_RULE>\n0\n\n> <JCHEM_NUMBER_OF_RINGS>\n0\n\n> <JCHEM_PHYSIOLOGICAL_CHARGE>\n-2\n\n> <JCHEM_PKA>\n6.951626889535468\n\n> <JCHEM_PKA_STRONGEST_ACIDIC>\n1.7961261340181292\n\n> <JCHEM_POLAR_SURFACE_AREA>\n86.25\n\n> <JCHEM_REFRACTIVITY>\n11.2868\n\n> <JCHEM_ROTATABLE_BOND_COUNT>\n0\n\n> <JCHEM_RULE_OF_FIVE>\n1\n\n> <JCHEM_TRADITIONAL_IUPAC>\nphosphate\n\n> <JCHEM_VEBER_RULE>\n0\n\n> <DRUGBANK_ID>\nDB14523\n\n> <DRUG_GROUPS>\nexperimental\n\n> <GENERIC_NAME>\nPhosphate ion\n\n> <SYNONYMS>\nOrthophosphate; Phosphate\n\n$$$$\n\nComp 2\n\n5  4  0  0  0  0            999 V2000\n  0.0000    0.8250    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0\n -0.8250    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0\n  0.0000   -0.8250    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0\n  0.0000    0.0000    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0\n  0.8250    0.0000    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0\n4  1  1  0  0  0  0\n4  2  2  0  0  0  0\n4  3  1  0  0  0  0\n4  5  1  0  0  0  0\nM  CHG  3   1  -1   3  -1   5  -1\nM  END\n> <DATABASE_ID>\n1\n\n$$$$\n\n2244\n  -OEChem-04122119123D\n\n 21 21  0     0  0  0  0  0  0999 V2000\n    1.2333    0.5540    0.7792 O   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.6952   -2.7148   -0.7502 O   0  0  0  0  0  0  0  0  0  0  0  0\n    0.7958   -2.1843    0.8685 O   0  0  0  0  0  0  0  0  0  0  0  0\n    1.7813    0.8105   -1.4821 O   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.0857    0.6088    0.4403 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.7927   -0.5515    0.1244 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.7288    1.8464    0.4133 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -2.1426   -0.4741   -0.2184 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -2.0787    1.9238    0.0706 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -2.7855    0.7636   -0.2453 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.1409   -1.8536    0.1477 C   0  0  0  0  0  0  0  0  0  0  0  0\n    2.1094    0.6715   -0.3113 C   0  0  0  0  0  0  0  0  0  0  0  0\n    3.5305    0.5996    0.1635 C   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.1851    2.7545    0.6593 H   0  0  0  0  0  0  0  0  0  0  0  0\n   -2.7247   -1.3605   -0.4564 H   0  0  0  0  0  0  0  0  0  0  0  0\n   -2.5797    2.8872    0.0506 H   0  0  0  0  0  0  0  0  0  0  0  0\n   -3.8374    0.8238   -0.5090 H   0  0  0  0  0  0  0  0  0  0  0  0\n    3.7290    1.4184    0.8593 H   0  0  0  0  0  0  0  0  0  0  0  0\n    4.2045    0.6969   -0.6924 H   0  0  0  0  0  0  0  0  0  0  0  0\n    3.7105   -0.3659    0.6426 H   0  0  0  0  0  0  0  0  0  0  0  0\n   -0.2555   -3.5916   -0.7337 H   0  0  0  0  0  0  0  0  0  0  0  0\n  1  5  1  0  0  0  0\n  1 12  1  0  0  0  0\n  2 11  1  0  0  0  0\n  2 21  1  0  0  0  0\n  3 11  2  0  0  0  0\n  4 12  2  0  0  0  0\n  5  6  1  0  0  0  0\n  5  7  2  0  0  0  0\n  6  8  2  0  0  0  0\n  6 11  1  0  0  0  0\n  7  9  1  0  0  0  0\n  7 14  1  0  0  0  0\n  8 10  1  0  0  0  0\n  8 15  1  0  0  0  0\n  9 10  2  0  0  0  0\n  9 16  1  0  0  0  0\n 10 17  1  0  0  0  0\n 12 13  1  0  0  0  0\n 13 18  1  0  0  0  0\n 13 19  1  0  0  0  0\n 13 20  1  0  0  0  0\nM  END\n> <PUBCHEM_COMPOUND_CID>\n2244\n\n> <PUBCHEM_CONFORMER_RMSD>\n0.6\n\n> <PUBCHEM_CONFORMER_DIVERSEORDER>\n1\n11\n10\n3\n15\n17\n13\n5\n16\n7\n14\n9\n8\n4\n18\n6\n12\n2\n\n> <PUBCHEM_MMFF94_PARTIAL_CHARGES>\n18\n1 -0.23\n10 -0.15\n11 0.63\n12 0.66\n13 0.06\n14 0.15\n15 0.15\n16 0.15\n17 0.15\n2 -0.65\n21 0.5\n3 -0.57\n4 -0.57\n5 0.08\n6 0.09\n7 -0.15\n8 -0.15\n9 -0.15\n\n> <PUBCHEM_EFFECTIVE_ROTOR_COUNT>\n3\n\n> <PUBCHEM_PHARMACOPHORE_FEATURES>\n5\n1 2 acceptor\n1 3 acceptor\n1 4 acceptor\n3 2 3 11 anion\n6 5 6 7 8 9 10 rings\n\n> <PUBCHEM_HEAVY_ATOM_COUNT>\n13\n\n> <PUBCHEM_ATOM_DEF_STEREO_COUNT>\n0\n\n> <PUBCHEM_ATOM_UDEF_STEREO_COUNT>\n0\n\n> <PUBCHEM_BOND_DEF_STEREO_COUNT>\n0\n\n> <PUBCHEM_BOND_UDEF_STEREO_COUNT>\n0\n\n> <PUBCHEM_ISOTOPIC_ATOM_COUNT>\n0\n\n> <PUBCHEM_COMPONENT_COUNT>\n1\n\n> <PUBCHEM_CACTVS_TAUTO_COUNT>\n1\n\n> <PUBCHEM_CONFORMER_ID>\n000008C400000001\n\n> <PUBCHEM_MMFF94_ENERGY>\n39.5952\n\n> <PUBCHEM_FEATURE_SELFOVERLAP>\n25.432\n\n> <PUBCHEM_SHAPE_FINGERPRINT>\n1 1 18265615372930943622\n100427 49 16967750034970055351\n12138202 97 18271247217817981012\n12423570 1 16692715976000295083\n12524768 44 16753525617747228747\n12716758 59 18341332292274886536\n13024252 1 17968377969333732145\n14181834 199 17830728755827362645\n14614273 12 18262232214645093005\n15207287 21 17703787037639964108\n15775835 57 18340488876329928641\n16945 1 18271533103414939405\n193761 8 17907860604865584321\n20645476 183 17677348215414174190\n20871998 184 18198632231250704846\n21040471 1 18411412921197846465\n21501502 16 18123463883164380929\n23402539 116 18271795865171824860\n23419403 2 13539898140662769886\n23552423 10 18048876295495619569\n23559900 14 18272369794190581304\n241688 4 16179044415907240795\n257057 1 17478316999871287486\n2748010 2 18339085878070479087\n305870 269 18263645056784260212\n528862 383 18117272558388284091\n53812653 8 18410289211719108569\n7364860 26 17910392788380644719\n81228 2 18050568744116491203\n\n> <PUBCHEM_SHAPE_MULTIPOLES>\n244.06\n3.86\n2.45\n0.89\n1.95\n1.58\n0.15\n-1.85\n0.38\n-0.61\n-0.02\n0.29\n0.01\n-0.33\n\n> <PUBCHEM_SHAPE_SELFOVERLAP>\n513.037\n\n> <PUBCHEM_SHAPE_VOLUME>\n136\n\n> <PUBCHEM_COORDINATE_TYPE>\n2\n5\n10\n\n$$$$\n";
+var V3000SdfString = "FYI-001\nFYICenter.com\n123456789012345678901234567890123456789012345678901234567890\n 0  0  0     0  0            999 V3000\nM  V30 BEGIN CTAB\nM  V30 COUNTS 13 14 0 0 0\nM  V30 BEGIN ATOM\nM  V30 1 N 0.84 -0.16 0 0\nM  V30 2 N 1.48 0.43 0 0\nM  V30 3 N 0.09 0.27 0 0\nM  V30 4 C 1.11 1.21 0 0\nM  V30 5 C 0.27 1.12 0 0\nM  V30 6 C 0.84 -1.03 0 0\nM  V30 7 C 1.53 1.99 0 0\nM  V30 8 Cl 1.07 2.74 0.01 0\nM  V30 9 C 1.59 -1.46 0 0\nM  V30 10 C 0.08 -1.46 0 0\nM  V30 11 C 1.59 -2.33 0 0\nM  V30 12 C 0.07 -2.32 0 0\nM  V30 13 C 0.84 -2.76 0 0\nM  V30 END ATOM\nM  V30 BEGIN BOND\nM  V30 1 1 2 1\nM  V30 2 1 3 1\nM  V30 3 1 6 1\nM  V30 4 2 4 2\nM  V30 5 2 5 3\nM  V30 6 1 7 4\nM  V30 7 1 4 5\nM  V30 8 1 9 6\nM  V30 9 2 10 6\nM  V30 10 1 8 7\nM  V30 11 2 11 9\nM  V30 12 1 12 10\nM  V30 13 1 13 11\nM  V30 14 2 13 12\nM  V30 END BOND\nM  V30 END CTAB\nM  END\n> <Comment>\nThis is an SDF example.\nWith a multi-line comment.\n\n> <source>\nThis was retrieved from biotech.fyicenter.com\n\n$$$$\nL-Alanine\nGSMACCS-II07189510252D 1 0.00366 0.00000 0\nFigure 1, J. Chem. Inf. Comput. Sci., Vol 32, No. 3., 1992\n 0 0 0 0 0 999 V3000\nM V30 BEGIN CTAB\nM V30 COUNTS 6 5 0 0 1\nM V30 BEGIN ATOM\nM V30 1 C -0.6622 0.5342 0 0 CFG=2\nM V30 2 C 0.6622 -0.3 0 0\nM V30 3 C -0.7207 2.0817 0 0 MASS=13\nM V30 4 N -1.8622 -0.3695 0 0 CHG=1\nM V30 5 O 0.622 -1.8037 0 0\nM V30 6 O 1.9464 0.4244 0 0 CHG=-1\nM V30 END ATOM\nM V30 BEGIN BOND\nM V30 1 1 1 2\nM V30 2 1 1 3 CFG=1\nM V30 3 1 1 4\nM V30 4 2 2 5\nM V30 5 1 2 6\nM V30 END BOND\nM V30 END CTAB\nM END\n\n$$$$\n";
 describe('sdf reader', function () {
     it('basic', function () { return __awaiter(void 0, void 0, void 0, function () {
         var parsed, compound1, compound2, compound3, molFile, dataItems, atoms, bonds;
@@ -48,5 +49,55 @@ describe('sdf reader', function () {
             }
         });
     }); });
+    it('v3000', function () { return __awaiter(void 0, void 0, void 0, function () {
+        var parsed, compound1, compound2;
+        return __generator(this, function (_a) {
+            switch (_a.label) {
+                case 0: return [4 /*yield*/, parseSdf(V3000SdfString).run()];
+                case 1:
+                    parsed = _a.sent();
+                    if (parsed.isError) {
+                        throw new Error(parsed.message);
+                    }
+                    expect(parsed.result.compounds.length).toBe(2);
+                    compound1 = parsed.result.compounds[0];
+                    expect(compound1.molFile.atoms.count).toBe(13);
+                    expect(compound1.molFile.atoms.x.rowCount).toBe(13);
+                    expect(compound1.molFile.atoms.y.rowCount).toBe(13);
+                    expect(compound1.molFile.atoms.z.rowCount).toBe(13);
+                    expect(compound1.molFile.atoms.type_symbol.rowCount).toBe(13);
+                    expect(compound1.molFile.bonds.count).toBe(14);
+                    expect(compound1.molFile.bonds.atomIdxA.rowCount).toBe(14);
+                    expect(compound1.molFile.bonds.atomIdxB.rowCount).toBe(14);
+                    expect(compound1.molFile.bonds.order.rowCount).toBe(14);
+                    expect(compound1.molFile.atoms.x.value(7)).toBe(1.07);
+                    expect(compound1.molFile.atoms.y.value(7)).toBe(2.74);
+                    expect(compound1.molFile.atoms.z.value(7)).toBe(0.01);
+                    expect(compound1.molFile.atoms.type_symbol.value(7)).toBe('Cl');
+                    expect(compound1.molFile.bonds.atomIdxA.value(10)).toBe(11);
+                    expect(compound1.molFile.bonds.atomIdxB.value(10)).toBe(9);
+                    expect(compound1.molFile.bonds.order.value(10)).toBe(2);
+                    expect(compound1.dataItems.dataHeader.rowCount).toBe(2);
+                    expect(compound1.dataItems.data.rowCount).toBe(2);
+                    expect(compound1.dataItems.dataHeader.value(0)).toBe('<Comment>');
+                    expect(compound1.dataItems.data.value(0)).toBe("This is an SDF example.\nWith a multi-line comment.");
+                    expect(compound1.dataItems.dataHeader.value(1)).toBe('<source>');
+                    expect(compound1.dataItems.data.value(1)).toBe('This was retrieved from biotech.fyicenter.com');
+                    compound2 = parsed.result.compounds[1];
+                    expect(compound2.molFile.atoms.count).toBe(6);
+                    expect(compound2.molFile.bonds.count).toBe(5);
+                    expect(compound2.molFile.atoms.x.value(4)).toBe(0.622);
+                    expect(compound2.molFile.atoms.y.value(4)).toBe(-1.8037);
+                    expect(compound2.molFile.atoms.z.value(4)).toBe(0);
+                    expect(compound2.molFile.atoms.type_symbol.value(4)).toBe('O');
+                    expect(compound2.molFile.bonds.atomIdxA.value(1)).toBe(1);
+                    expect(compound2.molFile.bonds.atomIdxB.value(1)).toBe(3);
+                    expect(compound2.molFile.bonds.order.value(1)).toBe(1);
+                    expect(compound2.dataItems.dataHeader.rowCount).toBe(0);
+                    expect(compound2.dataItems.data.rowCount).toBe(0);
+                    return [2 /*return*/];
+            }
+        });
+    }); });
 });
 //# sourceMappingURL=sdf.spec.js.map

package/lib/mol-io/reader/_spec/sdf.spec.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"sdf.spec.js","sourceRoot":"","sources":["../../../../src/mol-io/reader/_spec/sdf.spec.ts"],"names":[],"mappings":";AACA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAEzC,IAAM,SAAS,GAAG,+1MAyUjB,CAAC;AAEF,QAAQ,CAAC,YAAY,EAAE;IACnB,EAAE,CAAC,OAAO,EAAE;;;;wBACO,qBAAM,QAAQ,CAAC,SAAS,CAAC,CAAC,GAAG,EAAE,EAAA;;oBAAxC,MAAM,GAAG,SAA+B;oBAC9C,IAAI,MAAM,CAAC,OAAO,EAAE;wBAChB,MAAM,IAAI,KAAK,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;qBACnC;oBACK,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBACvC,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBACvC,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBACrC,OAAO,GAAgB,SAAS,QAAzB,EAAE,SAAS,GAAK,SAAS,UAAd,CAAe;oBACjC,KAAK,GAAY,OAAO,MAAnB,EAAE,KAAK,GAAK,OAAO,MAAZ,CAAa;oBAEjC,MAAM,CAAC,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE/C,uBAAuB;oBACvB,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC5B,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE5B,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC9C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE9C,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC;oBAC/C,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;oBACrD,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC;oBAChD,MAAM,CAAC,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAE7C,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACxC,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACxC,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAErC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC;oBAC5D,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAE1C,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;oBAC9D,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;oBAEjD,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,mBAAmB,CAAC,CAAC;oBAChE,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;oBAEjD,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;oBAC1D,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;oBAEnE,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBACpD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAEpD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,kCAAkC,CAAC,CAAC;oBACzF,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,+DAA+D,CAAC,CAAC;oBAEhH,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;oBACnF,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;;;;SAC/D,CAAC,CAAC;AACP,CAAC,CAAC,CAAC"}
1	+ {"version":3,"file":"sdf.spec.js","sourceRoot":"","sources":["../../../../src/mol-io/reader/_spec/sdf.spec.ts"],"names":[],"mappings":";AACA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAEzC,IAAM,SAAS,GAAG,+1MAyUjB,CAAC;AAEF,IAAM,cAAc,GAAG,shDAwEtB,CAAC;AAEF,QAAQ,CAAC,YAAY,EAAE;IACnB,EAAE,CAAC,OAAO,EAAE;;;;wBACO,qBAAM,QAAQ,CAAC,SAAS,CAAC,CAAC,GAAG,EAAE,EAAA;;oBAAxC,MAAM,GAAG,SAA+B;oBAC9C,IAAI,MAAM,CAAC,OAAO,EAAE;wBAChB,MAAM,IAAI,KAAK,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;qBACnC;oBACK,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBACvC,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBACvC,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBACrC,OAAO,GAAgB,SAAS,QAAzB,EAAE,SAAS,GAAK,SAAS,UAAd,CAAe;oBACjC,KAAK,GAAY,OAAO,MAAnB,EAAE,KAAK,GAAK,OAAO,MAAZ,CAAa;oBAEjC,MAAM,CAAC,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE/C,uBAAuB;oBACvB,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC5B,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE5B,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC9C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE9C,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC;oBAC/C,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;oBACrD,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC;oBAChD,MAAM,CAAC,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAE7C,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACxC,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACxC,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAErC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC;oBAC5D,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAE1C,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;oBAC9D,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;oBAEjD,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,mBAAmB,CAAC,CAAC;oBAChE,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;oBAEjD,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;oBAC1D,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;oBAEnE,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBACpD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAEpD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,kCAAkC,CAAC,CAAC;oBACzF,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,+DAA+D,CAAC,CAAC;oBAEhH,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;oBACnF,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;;;;SAC/D,CAAC,CAAC;IAEH,EAAE,CAAC,OAAO,EAAE;;;;wBACO,qBAAM,QAAQ,CAAC,cAAc,CAAC,CAAC,GAAG,EAAE,EAAA;;oBAA7C,MAAM,GAAG,SAAoC;oBACnD,IAAI,MAAM,CAAC,OAAO,EAAE;wBAChB,MAAM,IAAI,KAAK,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;qBACnC;oBAED,MAAM,CAAC,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAEzC,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBAC7C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAC/C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBACpD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBACpD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBACpD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAC9D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAC/C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAC3D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAC3D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAExD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;oBACtD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;oBACtD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;oBACtD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;oBAEhE,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAC5D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC3D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAExD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACxD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAElD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,WAAW,CAAC,CAAC;oBAClE,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,qDAAqD,CAAC,CAAC;oBAEtG,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;oBACjE,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,+CAA+C,CAAC,CAAC;oBAE1F,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;oBAC7C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC9C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAE9C,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;oBACvD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC,CAAC;oBACzD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACnD,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;oBAE/D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC1D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAC1D,MAAM,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAEvD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,UAAU,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBACxD,MAAM,CAAC,SAAS,CAAC,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;;;;SACrD,CAAC,CAAC;AACP,CAAC,CAAC,CAAC"}

package/lib/mol-io/reader/ccp4/parser.js CHANGED Viewed

@@ -122,7 +122,7 @@ function getCcp4DataType(mode) {
         case 6: TypedArrayValueType.Uint16;
         case 16: throw new Error('mode 16 unsupported, unsigned char * 3 (for rgb data, non-standard)');
     }
-    throw new Error("unknown mode '" + mode + "'");
+    throw new Error("unknown mode '".concat(mode, "'"));
 }
 /** check if the file was converted by mapmode2to0, see https://github.com/uglymol/uglymol */
 function isMapmode2to0(header) {

package/lib/mol-io/reader/ccp4/parser.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"parser.js","sourceRoot":"","sources":["../../../../src/mol-io/reader/ccp4/parser.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,IAAI,EAAkB,MAAM,mBAAmB,CAAC;AAEzD,OAAO,EAAE,YAAY,IAAI,MAAM,EAAE,MAAM,WAAW,CAAC;AACnD,OAAO,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,sCAAsC,CAAC;AACpE,OAAO,EAAE,mBAAmB,EAAE,kBAAkB,EAA2B,cAAc,EAAE,6BAA6B,EAAE,MAAM,oCAAoC,CAAC;AAErK,MAAM,UAAgB,cAAc,CAAC,IAAgB;;;;;;oBAC3C,UAAU,GAAG,IAAI,CAAC;oBACL,qBAAM,IAAI,CAAC,UAAU,CAAC,CAAC,EAAE,UAAU,CAAC,EAAA;;oBAA/C,MAAM,GAAK,CAAA,SAAoC,CAAA,OAAzC;oBAGR,GAAG,GAAG,MAAM,CAAC,YAAY,CAC3B,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,EACtD,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,CAC7D,CAAC;oBACF,IAAI,GAAG,KAAK,MAAM,EAAE;wBAChB,MAAM,IAAI,KAAK,CAAC,0CAA0C,CAAC,CAAC;qBAC/D;oBAIK,MAAM,GAAG,CAAC,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;oBACpE,YAAY,GAAG,KAAK,CAAC;oBACzB,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,EAAE;wBACtC,YAAY,GAAG,IAAI,CAAC;qBACvB;yBAAM,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,EAAE;wBAC7C,YAAY,GAAG,KAAK,CAAC;qBACxB;yBAAM;wBACG,MAAM,GAAG,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;wBACzC,IAAI,MAAM,IAAI,EAAE;4BAAE,YAAY,GAAG,IAAI,CAAC;qBACzC;oBAEK,OAAO,GAAG,YAAY,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC;oBAC7G,SAAS,GAAG,YAAY,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC;oBAE/G,MAAM,GAAe;wBACvB,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEd,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEhB,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;wBACnB,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;wBACnB,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEnB,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEd,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEtB,KAAK,EAAE,SAAS,CAAC,EAAE,CAAC;wBACpB,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBACnB,KAAK,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEpB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBACjB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBACjB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEjB,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBACnB,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBACnB,KAAK,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEpB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEjB,MAAM,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEnB,MAAM,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEnB,MAAM,EAAE,EAAE;wBACV,MAAM,EAAE,EAAE;wBAEV,SAAS,EAAE,OAAO,CAAC,EAAE,CAAC;wBACtB,SAAS,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEtB,kDAAkD;wBAClD,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEtB,GAAG,KAAA;wBACH,MAAM,QAAA;wBAEN,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEnB,sBAAsB;wBACtB,0BAA0B;qBAC7B,CAAC;oBAEF,sBAAO,EAAE,MAAM,QAAA,EAAE,YAAY,cAAA,EAAE,EAAC;;;;CACnC;AAED,MAAM,UAAgB,cAAc,CAAC,MAAkB,EAAE,MAA+B,EAAE,IAAgB,EAAE,UAAkB,EAAE,MAAc,EAAE,YAAqB;;;;;;yBAC7J,aAAa,CAAC,MAAM,CAAC,EAArB,wBAAqB;oBAEf,eAAe,GAAG,CAAC,GAAG,MAAM,CAAC;oBACnC,oDAAoD;oBACpD,qBAAM,IAAI,CAAC,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,UAAU,EAAE,MAAM,EAAE,eAAe,CAAC,EAAA;;oBAD7E,oDAAoD;oBACpD,SAA6E,CAAC;oBAExE,IAAI,GAAG,IAAI,SAAS,CAAC,MAAM,CAAC,YAAY,CAAC,MAAM,EAAE,eAAe,CAAC,CAAC;oBAElE,EAAE,GAAG,CAAC,MAAM,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,GAAG,KAAK,CAAC;oBACzC,EAAE,GAAG,GAAG,GAAG,CAAC,MAAM,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,GAAG,EAAE,CAAC,CAAC;oBAClD,KAAS,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;wBACtC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,EAAE,GAAG,IAAI,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;qBACxC;;wBAED,qBAAM,cAAc,CAAC,MAAM,EAAE,IAAI,EAAE,UAAU,EAAE,MAAM,EAAE,CAAC,EAAE,YAAY,CAAC,EAAA;;oBAAvE,SAAuE,CAAC;;;;;;CAE/E;AAED,SAAS,eAAe,CAAC,IAAY;IACjC,QAAQ,IAAI,EAAE;QACV,KAAK,CAAC,CAAC,CAAC,OAAO,mBAAmB,CAAC,IAAI,CAAC;QACxC,KAAK,CAAC,CAAC,CAAC,OAAO,mBAAmB,CAAC,KAAK,CAAC;QACzC,KAAK,CAAC,CAAC,CAAC,OAAO,mBAAmB,CAAC,OAAO,CAAC;QAC3C,KAAK,CAAC,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;QACvE,KAAK,CAAC,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,0CAA0C,CAAC,CAAC;QACpE,KAAK,CAAC,CAAC,CAAC,mBAAmB,CAAC,MAAM,CAAC;QACnC,KAAK,EAAE,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,qEAAqE,CAAC,CAAC;KACnG;IACD,MAAM,IAAI,KAAK,CAAC,~~mBAAiB~~,IAAI,MAAG,CAAC,CAAC;AAC9C,CAAC;AAED,6FAA6F;AAC7F,SAAS,aAAa,CAAC,MAAkB;IACrC,OAAO,MAAM,CAAC,SAAS,KAAK,CAAC,GAAG,IAAI,MAAM,CAAC,SAAS,KAAK,GAAG,CAAC;AACjE,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,MAAkB;IAC/C,OAAO,aAAa,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,mBAAmB,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;AAC9F,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,MAAkB;IAChD,OAAO,GAAG,GAAG,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC;AACnC,CAAC;AAED,SAAe,aAAa,CAAC,IAAgB,EAAE,IAAY,EAAE,GAAmB;;;;;wBAC5E,qBAAM,GAAG,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,8BAA8B,EAAE,CAAC,EAAA;;oBAA7D,SAA6D,CAAC;oBAE7B,qBAAM,cAAc,CAAC,IAAI,CAAC,EAAA;;oBAArD,KAA2B,SAA0B,EAAnD,MAAM,YAAA,EAAE,YAAY,kBAAA;oBACtB,MAAM,GAAG,iBAAiB,CAAC,MAAM,CAAC,CAAC;oBACnC,QAAQ,GAAG,eAAe,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;oBACxC,SAAS,GAAG,gBAAgB,CAAC,MAAM,CAAC,CAAC;oBAErC,KAAK,GAAG,MAAM,CAAC,EAAE,GAAG,MAAM,CAAC,EAAE,GAAG,MAAM,CAAC,EAAE,CAAC;oBAC1C,eAAe,GAAG,kBAAkB,CAAC,QAAQ,CAAC,CAAC;oBAC/C,SAAS,GAAG,KAAK,GAAG,eAAe,CAAC;oBAEpC,MAAM,GAAG,6BAA6B,CAAC,KAAK,EAAE,SAAS,CAAC,CAAC;oBAC/D,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,SAAS,EAAE,YAAY,CAAC,CAAC;oBAEhE,MAAM,GAAa,EAAE,MAAM,QAAA,EAAE,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,CAAC;oBAC5E,sBAAO,MAAM,EAAC;;;;CACjB;AAED,MAAM,UAAU,SAAS,CAAC,IAAgB,EAAE,IAAY;IAAxD,iBAQC;IAPG,OAAO,IAAI,CAAC,MAAM,CAAmB,oBAAoB,EAAE,UAAM,GAAG;;;;;;oBAErD,KAAA,CAAA,KAAA,MAAM,CAAA,CAAC,OAAO,CAAA;oBAAC,qBAAM,aAAa,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,EAAA;wBAA1D,sBAAO,cAAe,SAAoC,EAAC,EAAC;;;oBAE5D,sBAAO,MAAM,CAAC,KAAK,CAAC,GAAC,CAAC,EAAC;;;;SAE9B,CAAC,CAAC;AACP,CAAC;AAED,MAAM,UAAU,KAAK,CAAC,MAAkB,EAAE,IAAY;IAClD,OAAO,SAAS,CAAC,UAAU,CAAC,UAAU,CAAC,YAAY,CAAC,cAAc,CAAC,MAAM,CAAC,EAAE,IAAI,CAAC,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;AACtG,CAAC"}
1	+ {"version":3,"file":"parser.js","sourceRoot":"","sources":["../../../../src/mol-io/reader/ccp4/parser.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,IAAI,EAAkB,MAAM,mBAAmB,CAAC;AAEzD,OAAO,EAAE,YAAY,IAAI,MAAM,EAAE,MAAM,WAAW,CAAC;AACnD,OAAO,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AACtD,OAAO,EAAE,YAAY,EAAE,MAAM,sCAAsC,CAAC;AACpE,OAAO,EAAE,mBAAmB,EAAE,kBAAkB,EAA2B,cAAc,EAAE,6BAA6B,EAAE,MAAM,oCAAoC,CAAC;AAErK,MAAM,UAAgB,cAAc,CAAC,IAAgB;;;;;;oBAC3C,UAAU,GAAG,IAAI,CAAC;oBACL,qBAAM,IAAI,CAAC,UAAU,CAAC,CAAC,EAAE,UAAU,CAAC,EAAA;;oBAA/C,MAAM,GAAK,CAAA,SAAoC,CAAA,OAAzC;oBAGR,GAAG,GAAG,MAAM,CAAC,YAAY,CAC3B,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,EACtD,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,CAC7D,CAAC;oBACF,IAAI,GAAG,KAAK,MAAM,EAAE;wBAChB,MAAM,IAAI,KAAK,CAAC,0CAA0C,CAAC,CAAC;qBAC/D;oBAIK,MAAM,GAAG,CAAC,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,CAAC,EAAE,MAAM,CAAC,SAAS,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;oBACpE,YAAY,GAAG,KAAK,CAAC;oBACzB,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,EAAE;wBACtC,YAAY,GAAG,IAAI,CAAC;qBACvB;yBAAM,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,IAAI,MAAM,CAAC,CAAC,CAAC,KAAK,EAAE,EAAE;wBAC7C,YAAY,GAAG,KAAK,CAAC;qBACxB;yBAAM;wBACG,MAAM,GAAG,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;wBACzC,IAAI,MAAM,IAAI,EAAE;4BAAE,YAAY,GAAG,IAAI,CAAC;qBACzC;oBAEK,OAAO,GAAG,YAAY,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC;oBAC7G,SAAS,GAAG,YAAY,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,MAAM,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,EAAzB,CAAyB,CAAC;oBAE/G,MAAM,GAAe;wBACvB,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEd,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEhB,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;wBACnB,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;wBACnB,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEnB,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBACd,EAAE,EAAE,OAAO,CAAC,CAAC,CAAC;wBAEd,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEtB,KAAK,EAAE,SAAS,CAAC,EAAE,CAAC;wBACpB,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBACnB,KAAK,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEpB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBACjB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBACjB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEjB,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBACnB,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBACnB,KAAK,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEpB,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEjB,MAAM,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEnB,MAAM,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEnB,MAAM,EAAE,EAAE;wBACV,MAAM,EAAE,EAAE;wBAEV,SAAS,EAAE,OAAO,CAAC,EAAE,CAAC;wBACtB,SAAS,EAAE,OAAO,CAAC,EAAE,CAAC;wBAEtB,kDAAkD;wBAClD,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBACtB,OAAO,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEtB,GAAG,KAAA;wBACH,MAAM,QAAA;wBAEN,IAAI,EAAE,SAAS,CAAC,EAAE,CAAC;wBAEnB,sBAAsB;wBACtB,0BAA0B;qBAC7B,CAAC;oBAEF,sBAAO,EAAE,MAAM,QAAA,EAAE,YAAY,cAAA,EAAE,EAAC;;;;CACnC;AAED,MAAM,UAAgB,cAAc,CAAC,MAAkB,EAAE,MAA+B,EAAE,IAAgB,EAAE,UAAkB,EAAE,MAAc,EAAE,YAAqB;;;;;;yBAC7J,aAAa,CAAC,MAAM,CAAC,EAArB,wBAAqB;oBAEf,eAAe,GAAG,CAAC,GAAG,MAAM,CAAC;oBACnC,oDAAoD;oBACpD,qBAAM,IAAI,CAAC,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,UAAU,EAAE,MAAM,EAAE,eAAe,CAAC,EAAA;;oBAD7E,oDAAoD;oBACpD,SAA6E,CAAC;oBAExE,IAAI,GAAG,IAAI,SAAS,CAAC,MAAM,CAAC,YAAY,CAAC,MAAM,EAAE,eAAe,CAAC,CAAC;oBAElE,EAAE,GAAG,CAAC,MAAM,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,GAAG,KAAK,CAAC;oBACzC,EAAE,GAAG,GAAG,GAAG,CAAC,MAAM,CAAC,IAAI,GAAG,MAAM,CAAC,IAAI,GAAG,EAAE,CAAC,CAAC;oBAClD,KAAS,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;wBACtC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,EAAE,GAAG,IAAI,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC;qBACxC;;wBAED,qBAAM,cAAc,CAAC,MAAM,EAAE,IAAI,EAAE,UAAU,EAAE,MAAM,EAAE,CAAC,EAAE,YAAY,CAAC,EAAA;;oBAAvE,SAAuE,CAAC;;;;;;CAE/E;AAED,SAAS,eAAe,CAAC,IAAY;IACjC,QAAQ,IAAI,EAAE;QACV,KAAK,CAAC,CAAC,CAAC,OAAO,mBAAmB,CAAC,IAAI,CAAC;QACxC,KAAK,CAAC,CAAC,CAAC,OAAO,mBAAmB,CAAC,KAAK,CAAC;QACzC,KAAK,CAAC,CAAC,CAAC,OAAO,mBAAmB,CAAC,OAAO,CAAC;QAC3C,KAAK,CAAC,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;QACvE,KAAK,CAAC,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,0CAA0C,CAAC,CAAC;QACpE,KAAK,CAAC,CAAC,CAAC,mBAAmB,CAAC,MAAM,CAAC;QACnC,KAAK,EAAE,CAAC,CAAC,MAAM,IAAI,KAAK,CAAC,qEAAqE,CAAC,CAAC;KACnG;IACD,MAAM,IAAI,KAAK,CAAC,wBAAiB,IAAI,MAAG,CAAC,CAAC;AAC9C,CAAC;AAED,6FAA6F;AAC7F,SAAS,aAAa,CAAC,MAAkB;IACrC,OAAO,MAAM,CAAC,SAAS,KAAK,CAAC,GAAG,IAAI,MAAM,CAAC,SAAS,KAAK,GAAG,CAAC;AACjE,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,MAAkB;IAC/C,OAAO,aAAa,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,mBAAmB,CAAC,OAAO,CAAC,CAAC,CAAC,eAAe,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;AAC9F,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,MAAkB;IAChD,OAAO,GAAG,GAAG,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC;AACnC,CAAC;AAED,SAAe,aAAa,CAAC,IAAgB,EAAE,IAAY,EAAE,GAAmB;;;;;wBAC5E,qBAAM,GAAG,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,8BAA8B,EAAE,CAAC,EAAA;;oBAA7D,SAA6D,CAAC;oBAE7B,qBAAM,cAAc,CAAC,IAAI,CAAC,EAAA;;oBAArD,KAA2B,SAA0B,EAAnD,MAAM,YAAA,EAAE,YAAY,kBAAA;oBACtB,MAAM,GAAG,iBAAiB,CAAC,MAAM,CAAC,CAAC;oBACnC,QAAQ,GAAG,eAAe,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;oBACxC,SAAS,GAAG,gBAAgB,CAAC,MAAM,CAAC,CAAC;oBAErC,KAAK,GAAG,MAAM,CAAC,EAAE,GAAG,MAAM,CAAC,EAAE,GAAG,MAAM,CAAC,EAAE,CAAC;oBAC1C,eAAe,GAAG,kBAAkB,CAAC,QAAQ,CAAC,CAAC;oBAC/C,SAAS,GAAG,KAAK,GAAG,eAAe,CAAC;oBAEpC,MAAM,GAAG,6BAA6B,CAAC,KAAK,EAAE,SAAS,CAAC,CAAC;oBAC/D,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,SAAS,EAAE,YAAY,CAAC,CAAC;oBAEhE,MAAM,GAAa,EAAE,MAAM,QAAA,EAAE,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,CAAC;oBAC5E,sBAAO,MAAM,EAAC;;;;CACjB;AAED,MAAM,UAAU,SAAS,CAAC,IAAgB,EAAE,IAAY;IAAxD,iBAQC;IAPG,OAAO,IAAI,CAAC,MAAM,CAAmB,oBAAoB,EAAE,UAAM,GAAG;;;;;;oBAErD,KAAA,CAAA,KAAA,MAAM,CAAA,CAAC,OAAO,CAAA;oBAAC,qBAAM,aAAa,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,CAAC,EAAA;wBAA1D,sBAAO,cAAe,SAAoC,EAAC,EAAC;;;oBAE5D,sBAAO,MAAM,CAAC,KAAK,CAAC,GAAC,CAAC,EAAC;;;;SAE9B,CAAC,CAAC;AACP,CAAC;AAED,MAAM,UAAU,KAAK,CAAC,MAAkB,EAAE,IAAY;IAClD,OAAO,SAAS,CAAC,UAAU,CAAC,UAAU,CAAC,YAAY,CAAC,cAAc,CAAC,MAAM,CAAC,EAAE,IAAI,CAAC,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;AACtG,CAAC"}

package/lib/mol-io/reader/cif/binary/parser.js CHANGED Viewed

@@ -47,7 +47,7 @@ export function parseCifBinary(data) {
             try {
                 unpacked = decodeMsgPack(data);
                 if (!checkVersions(minVersion, unpacked.version.match(/(\d)\.(\d)\.\d/).slice(1).map(function (v) { return +v; }))) {
-                    return [2 /*return*/, Result.error("Unsupported format version. Current " + unpacked.version + ", required " + minVersion.join('.') + ".")];
+                    return [2 /*return*/, Result.error("Unsupported format version. Current ".concat(unpacked.version, ", required ").concat(minVersion.join('.'), "."))];
                 }
                 file = Data.CifFile(unpacked.dataBlocks.map(function (block) {
                     var cats = Object.create(null);

package/lib/mol-io/reader/cif/binary/parser.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"parser.js","sourceRoot":"","sources":["../../../../../src/mol-io/reader/cif/binary/parser.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,KAAK,IAAI,MAAM,eAAe,CAAC;AAEtC,OAAO,EAAE,KAAK,EAAE,MAAM,SAAS,CAAC;AAChC,OAAO,EAAE,YAAY,IAAI,MAAM,EAAE,MAAM,cAAc,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,gCAAgC,CAAC;AAC/D,OAAO,EAAE,IAAI,EAAE,MAAM,sBAAsB,CAAC;AAE5C,SAAS,aAAa,CAAC,GAAa,EAAE,OAAiB;IACnD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QACxB,IAAI,GAAG,CAAC,CAAC,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC;YAAE,OAAO,KAAK,CAAC;KACzC;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,QAAQ,CAAC,IAAqB;IACnC,IAAM,GAAG,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAChC,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAkB,UAAY,EAAZ,KAAA,IAAI,CAAC,OAAO,EAAZ,cAAY,EAAZ,IAAY;QAAzB,IAAM,GAAG,SAAA;QAAkB,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,GAAG,CAAC;KAAA;IACpD,OAAO;QACH,QAAQ,EAAE,IAAI,CAAC,QAAQ;QACvB,IAAI,EAAE,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC;QACzB,UAAU,EAAE,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC;QACzC,QAAQ,YAAC,IAAI;YACT,IAAM,GAAG,GAAG,GAAG,CAAC,IAAI,CAAC,CAAC;YACtB,IAAI,CAAC,GAAG;gBAAE,OAAO,KAAK,CAAC,CAAC;YACxB,IAAI,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC;gBAAE,OAAO,KAAK,CAAC,IAAI,CAAC,CAAC;YACtC,KAAK,CAAC,IAAI,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC;YACzB,OAAO,KAAK,CAAC,IAAI,CAAC,CAAC;QACvB,CAAC;KACJ,CAAC;AACN,CAAC;AAED,MAAM,UAAU,cAAc,CAAC,IAAgB;IAA/C,iBAmBC;IAlBG,OAAO,IAAI,CAAC,MAAM,CAAuB,iBAAiB,EAAE,UAAM,GAAG;;;YAC3D,UAAU,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;YAE1B,IAAI;gBACM,QAAQ,GAAG,aAAa,CAAC,IAAI,CAAgB,CAAC;gBACpD,IAAI,CAAC,aAAa,CAAC,UAAU,EAAE,QAAQ,CAAC,OAAO,CAAC,KAAK,CAAC,gBAAgB,CAAE,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,EAAF,CAAE,CAAC,CAAC,EAAE;oBAC7F,sBAAO,MAAM,CAAC,KAAK,CAAe,~~yCAAuC~~,QAAQ,CAAC,OAAO,~~mBAAc~~,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,MAAG,CAAC,EAAC;iBACnI;gBACK,IAAI,GAAG,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,GAAG,CAAC,UAAA,KAAK;oBACnD,IAAM,IAAI,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;oBACjC,KAAkB,UAAgB,EAAhB,KAAA,KAAK,CAAC,UAAU,EAAhB,cAAgB,EAAhB,IAAgB;wBAA7B,IAAM,GAAG,SAAA;wBAAsB,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC;qBAAA;oBAC7E,OAAO,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,UAAU,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,EAAhB,CAAgB,CAAC,EAAE,IAAI,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC;gBAC1F,CAAC,CAAC,CAAC,CAAC;gBACJ,sBAAO,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,EAAC;aAC/B;YAAC,OAAO,CAAC,EAAE;gBACR,sBAAO,MAAM,CAAC,KAAK,CAAe,EAAE,GAAG,CAAC,CAAC,EAAC;aAC7C;;;SACJ,CAAC,CAAC;AACP,CAAC"}
1	+ {"version":3,"file":"parser.js","sourceRoot":"","sources":["../../../../../src/mol-io/reader/cif/binary/parser.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,KAAK,IAAI,MAAM,eAAe,CAAC;AAEtC,OAAO,EAAE,KAAK,EAAE,MAAM,SAAS,CAAC;AAChC,OAAO,EAAE,YAAY,IAAI,MAAM,EAAE,MAAM,cAAc,CAAC;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,gCAAgC,CAAC;AAC/D,OAAO,EAAE,IAAI,EAAE,MAAM,sBAAsB,CAAC;AAE5C,SAAS,aAAa,CAAC,GAAa,EAAE,OAAiB;IACnD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QACxB,IAAI,GAAG,CAAC,CAAC,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC;YAAE,OAAO,KAAK,CAAC;KACzC;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,QAAQ,CAAC,IAAqB;IACnC,IAAM,GAAG,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAChC,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAkB,UAAY,EAAZ,KAAA,IAAI,CAAC,OAAO,EAAZ,cAAY,EAAZ,IAAY;QAAzB,IAAM,GAAG,SAAA;QAAkB,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,GAAG,CAAC;KAAA;IACpD,OAAO;QACH,QAAQ,EAAE,IAAI,CAAC,QAAQ;QACvB,IAAI,EAAE,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC;QACzB,UAAU,EAAE,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC;QACzC,QAAQ,YAAC,IAAI;YACT,IAAM,GAAG,GAAG,GAAG,CAAC,IAAI,CAAC,CAAC;YACtB,IAAI,CAAC,GAAG;gBAAE,OAAO,KAAK,CAAC,CAAC;YACxB,IAAI,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC;gBAAE,OAAO,KAAK,CAAC,IAAI,CAAC,CAAC;YACtC,KAAK,CAAC,IAAI,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC;YACzB,OAAO,KAAK,CAAC,IAAI,CAAC,CAAC;QACvB,CAAC;KACJ,CAAC;AACN,CAAC;AAED,MAAM,UAAU,cAAc,CAAC,IAAgB;IAA/C,iBAmBC;IAlBG,OAAO,IAAI,CAAC,MAAM,CAAuB,iBAAiB,EAAE,UAAM,GAAG;;;YAC3D,UAAU,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;YAE1B,IAAI;gBACM,QAAQ,GAAG,aAAa,CAAC,IAAI,CAAgB,CAAC;gBACpD,IAAI,CAAC,aAAa,CAAC,UAAU,EAAE,QAAQ,CAAC,OAAO,CAAC,KAAK,CAAC,gBAAgB,CAAE,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,EAAF,CAAE,CAAC,CAAC,EAAE;oBAC7F,sBAAO,MAAM,CAAC,KAAK,CAAe,8CAAuC,QAAQ,CAAC,OAAO,wBAAc,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,MAAG,CAAC,EAAC;iBACnI;gBACK,IAAI,GAAG,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,GAAG,CAAC,UAAA,KAAK;oBACnD,IAAM,IAAI,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;oBACjC,KAAkB,UAAgB,EAAhB,KAAA,KAAK,CAAC,UAAU,EAAhB,cAAgB,EAAhB,IAAgB;wBAA7B,IAAM,GAAG,SAAA;wBAAsB,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC;qBAAA;oBAC7E,OAAO,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,UAAU,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,EAAhB,CAAgB,CAAC,EAAE,IAAI,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC;gBAC1F,CAAC,CAAC,CAAC,CAAC;gBACJ,sBAAO,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,EAAC;aAC/B;YAAC,OAAO,CAAC,EAAE;gBACR,sBAAO,MAAM,CAAC,KAAK,CAAe,EAAE,GAAG,CAAC,CAAC,EAAC;aAC7C;;;SACJ,CAAC,CAAC;AACP,CAAC"}

package/lib/mol-io/reader/cif/data-model.js CHANGED Viewed

@@ -193,7 +193,7 @@ export var CifField;
                 float = function (row) { return NaN; };
                 break;
             default:
-                throw new Error("unsupported valueType '" + column.schema.valueType + "'");
+                throw new Error("unsupported valueType '".concat(column.schema.valueType, "'"));
         }
         return {
             __array: void 0,
@@ -221,16 +221,16 @@ export function tensorFieldNameGetter(field, rank, zeroIndexed, namingVariant) {
     switch (rank) {
         case 1:
             return namingVariant === 'brackets'
-                ? function (i) { return field + "[" + (i + offset) + "]"; }
-                : function (i) { return field + "_" + (i + offset); };
+                ? function (i) { return "".concat(field, "[").concat(i + offset, "]"); }
+                : function (i) { return "".concat(field, "_").concat(i + offset); };
         case 2:
             return namingVariant === 'brackets'
-                ? function (i, j) { return field + "[" + (i + offset) + "][" + (j + offset) + "]"; }
-                : function (i, j) { return field + "_" + (i + offset) + (j + offset); };
+                ? function (i, j) { return "".concat(field, "[").concat(i + offset, "][").concat(j + offset, "]"); }
+                : function (i, j) { return "".concat(field, "_").concat(i + offset).concat(j + offset); };
         case 3:
             return namingVariant === 'brackets'
-                ? function (i, j, k) { return field + "[" + (i + offset) + "][" + (j + offset) + "][" + (k + offset) + "]"; }
-                : function (i, j, k) { return field + "_" + (i + offset) + (j + offset) + (k + offset); };
+                ? function (i, j, k) { return "".concat(field, "[").concat(i + offset, "][").concat(j + offset, "][").concat(k + offset, "]"); }
+                : function (i, j, k) { return "".concat(field, "_").concat(i + offset).concat(j + offset).concat(k + offset); };
         default:
             throw new Error('Tensors with rank > 3 or rank 0 are currently not supported.');
     }

package/lib/mol-io/reader/cif/data-model.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"data-model.js","sourceRoot":"","sources":["../../../../src/mol-io/reader/cif/data-model.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAE,MAAM,EAAE,aAAa,EAAS,MAAM,sBAAsB,CAAC;AAEpE,OAAO,EAAE,aAAa,EAAc,QAAQ,IAAI,YAAY,EAAE,UAAU,IAAI,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAGjI,OAAO,EAAE,sBAAsB,EAAE,MAAM,6BAA6B,CAAC;AAOrE,MAAM,UAAU,OAAO,CAAC,MAA2B,EAAE,IAAa;IAC9D,OAAO,EAAE,IAAI,MAAA,EAAE,MAAM,EAAE,MAAa,EAAE,CAAC;AAC3C,CAAC;AAcD,MAAM,UAAU,QAAQ,CAAC,aAAuB,EAAE,UAAyB,EAAE,MAAc,EAAE,UAA2B;IAA3B,2BAAA,EAAA,eAA2B;IACpH,OAAO;QACH,aAAa,eAAA;QAAE,MAAM,QAAA;QAAE,UAAU,YAAA;QAAE,UAAU,YAAA;QAC7C,QAAQ,EAAR,UAAS,IAAY;YACX,IAAA,KAAoB,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAAlC,QAAQ,QAAA,EAAE,KAAK,QAAmB,CAAC;YAC1C,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,QAAQ,CAAC,KAAK,IAAI,EAAE,CAAC,CAAC;QACtD,CAAC;KACJ,CAAC;AACN,CAAC;AAED,MAAM,UAAU,YAAY,CAAC,aAAuB,EAAE,UAAyB,EAAE,MAAc;IAC3F,OAAO,EAAE,aAAa,eAAA,EAAE,MAAM,QAAA,EAAE,UAAU,YAAA,EAAE,CAAC;AACjD,CAAC;AAYD,MAAM,UAAU,WAAW,CAAC,IAAY,EAAE,QAAgB,EAAE,UAAoB,EAAE,MAAoC;IAClH,OAAO,EAAE,QAAQ,UAAA,EAAE,IAAI,MAAA,EAAE,UAAU,oBAAM,UAAU,OAAC,EAAE,QAAQ,YAAC,IAAI,IAAI,OAAO,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;AACpG,CAAC;AAED,WAAiB,WAAW;IACxB,SAAgB,KAAK,CAAC,IAAY;QAC9B,OAAO,EAAE,QAAQ,EAAE,CAAC,EAAE,IAAI,MAAA,EAAE,UAAU,EAAE,EAAE,EAAE,QAAQ,EAAR,UAAS,IAAY,IAAI,OAAO,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IAC5F,CAAC;IAFe,iBAAK,QAEpB,CAAA;IAAA,CAAC;IAKF,SAAgB,QAAQ,CAAC,IAAY,EAAE,MAAgD;QACnF,IAAM,UAAU,GAAG,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;QACvC,OAAO;YACH,QAAQ,EAAE,UAAU,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC,CAAC,CAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;YACrE,IAAI,MAAA;YACJ,UAAU,YAAA;YACV,QAAQ,YAAC,IAAI,IAAI,OAAO,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;SAC1C,CAAC;IACN,CAAC;IARe,oBAAQ,WAQvB,CAAA;IAED,SAAgB,OAAO,CAAC,IAAY,EAAE,KAAiB;QACnD,IAAM,MAAM,GAA6C,EAAE,CAAC;QAC5D,KAAmB,UAAc,EAAd,KAAA,KAAK,CAAC,QAAQ,EAAd,cAAc,EAAd,IAAc,EAAE;YAA9B,IAAM,MAAI,SAAA;YACX,MAAM,CAAC,MAAI,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAI,CAAC,CAAC,CAAC;SACjD;QACD,OAAO,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC;IAClC,CAAC;IANe,mBAAO,UAMtB,CAAA;AACL,CAAC,EAzBgB,WAAW,KAAX,WAAW,QAyB3B;AA0BD,MAAM,KAAW,QAAQ,CA6JxB;AA7JD,WAAiB,QAAQ;IACrB,SAAgB,QAAQ,CAAC,KAAa;QAClC,OAAO,SAAS,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;IAC9B,CAAC;IAFe,iBAAQ,WAEvB,CAAA;IAED,SAAgB,SAAS,CAAC,MAAyB;QAC/C,IAAM,QAAQ,GAAG,MAAM,CAAC,MAAM,CAAC;QAC/B,IAAM,GAAG,GAAoB,UAAA,GAAG,IAAM,IAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,IAAI,GAAG,KAAK,GAAG,IAAI,GAAG,KAAK,GAAG;YAAE,OAAO,EAAE,CAAC,CAAC,OAAO,GAAG,CAAC,CAAC,CAAC,CAAC;QAChI,IAAM,GAAG,GAAoB,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,YAAY,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;QACzG,IAAM,KAAK,GAAsB,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,cAAc,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;QAC/G,IAAM,SAAS,GAA0B,UAAA,GAAG;YACxC,IAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,CAAC;YACpC,IAAI,CAAC,GAAG,CAAC;gBAAE,uBAAgC;YAC3C,IAAI,CAAC,KAAK,CAAC;gBAAE,0BAAmC;YAChD,IAAM,CAAC,GAAG,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;YAC1B,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,0BAAmC;YACzD,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,uBAAgC;YACtD,uBAAgC;QACpC,CAAC,CAAC;QAEF,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,EAAE,IAAI;YACf,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,KAAA;YACH,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,EAAE,UAAC,IAAI,EAAE,IAAI,IAAK,OAAA,MAAM,CAAC,IAAI,CAAC,KAAK,MAAM,CAAC,IAAI,CAAC,EAA7B,CAA6B;YAC7D,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,MAAM,CAAC,CAAC,CAAC,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,CAAC,CAAC,CAAC,MAAkB,EAArF,CAAqF;YAC9G,UAAU,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAC7E,YAAY,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,EAAzD,CAAyD;SACpF,CAAC;IACN,CAAC;IA7Be,kBAAS,YA6BxB,CAAA;IAED,SAAgB,SAAS,CAAC,MAAyB;QAC/C,IAAM,QAAQ,GAAG,MAAM,CAAC,MAAM,CAAC;QAC/B,IAAM,GAAG,GAAoB,UAAA,GAAG,IAAM,OAAO,EAAE,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QACjE,IAAM,KAAK,GAAsB,UAAA,GAAG,IAAI,OAAA,MAAM,CAAC,GAAG,CAAC,EAAX,CAAW,CAAC;QACpD,IAAM,SAAS,GAA0B,UAAA,GAAG,IAAI,wBAAA,CAAwB,CAAC;QAEzE,IAAM,YAAY,GAAG,UAAC,MAAoC;YACtD,IAAI,CAAC,MAAM,IAAI,MAAM,CAAC,KAAK,IAAI,MAAM,YAAY,MAAM,CAAC,KAAK,EAAE;gBAC3D,OAAO,MAAkB,CAAC;aAC7B;iBAAM;gBACH,OAAO,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,CAAC;aACpE;QACL,CAAC,CAAC;QAEF,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,EAAE,IAAI;YACf,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,EAAE,KAAK;YACV,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,EAAE,UAAC,IAAI,EAAE,IAAI,IAAK,OAAA,MAAM,CAAC,IAAI,CAAC,KAAK,MAAM,CAAC,IAAI,CAAC,EAA7B,CAA6B;YAC7D,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAChF,UAAU,EAAE,YAAY;YACxB,YAAY,cAAA;SACf,CAAC;IACN,CAAC;IA5Be,kBAAS,YA4BxB,CAAA;IAED,SAAgB,QAAQ,CAAC,MAAc;QAC3B,IAAA,IAAI,GAA+B,MAAM,KAArC,EAAE,OAAO,GAAsB,MAAM,QAA5B,EAAS,QAAQ,GAAK,MAAM,MAAX,CAAY;QAElD,IAAM,GAAG,GAAoB,UAAA,GAAG;YAC5B,IAAM,GAAG,GAAG,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC;YACnE,IAAI,GAAG,KAAK,GAAG,IAAI,GAAG,KAAK,GAAG;gBAAE,OAAO,EAAE,CAAC;YAC1C,OAAO,GAAG,CAAC;QACf,CAAC,CAAC;QAEF,IAAM,GAAG,GAAoB,UAAA,GAAG;YAC5B,OAAO,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;QAC3E,CAAC,CAAC;QAEF,IAAM,KAAK,GAAsB,UAAA,GAAG;YAChC,OAAO,cAAc,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;QAC7E,CAAC,CAAC;QAEF,IAAM,SAAS,GAA0B,UAAA,GAAG;YACxC,IAAM,CAAC,GAAG,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;YACzD,IAAI,CAAC,GAAG,CAAC;gBAAE,uBAAgC;YAC3C,IAAI,CAAC,KAAK,CAAC;gBAAE,0BAAmC;YAChD,IAAM,CAAC,GAAG,IAAI,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;YAC7B,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,0BAAmC;YACzD,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,uBAAgC;YACtD,uBAAgC;QACpC,CAAC,CAAC;QAEF,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,EAAE,IAAI;YACf,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,KAAA;YACH,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,EAAE,sBAAsB,CAAC,MAAM,CAAC;YAC9C,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAChF,UAAU,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAC7E,YAAY,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,EAAzD,CAAyD;SACpF,CAAC;IACN,CAAC;IAzCe,iBAAQ,WAyCvB,CAAA;IAED,SAAgB,QAAQ,CAAC,MAAmB;QAChC,IAAA,QAAQ,GAA2C,MAAM,SAAjD,EAAE,SAAS,GAAgC,MAAM,UAAtC,EAAE,cAAc,GAAgB,MAAM,eAAtB,EAAE,SAAS,GAAK,MAAM,UAAX,CAAY;QAElE,IAAI,GAAoB,CAAC;QACzB,IAAI,GAAoB,CAAC;QACzB,IAAI,KAAwB,CAAC;QAE7B,QAAQ,MAAM,CAAC,MAAM,CAAC,SAAS,EAAE;YAC7B,KAAK,OAAO,CAAC;YACb,KAAK,KAAK;gBACN,GAAG,GAAG,UAAA,GAAG,IAAM,OAAO,EAAE,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBAChD,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC;gBACnB,KAAK,GAAG,MAAM,CAAC,KAAK,CAAC;gBACrB,MAAM;YACV,KAAK,KAAK;gBACN,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC;gBACnB,GAAG,GAAG,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,YAAY,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;gBACxF,KAAK,GAAG,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,cAAc,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;gBAC5F,MAAM;YACV,KAAK,MAAM;gBACC,IAAA,WAAS,GAAK,MAAM,CAAC,MAAM,UAAlB,CAAmB;gBACpC,GAAG,GAAG,UAAA,GAAG,IAAI,OAAA,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,WAAS,CAAC,EAAjC,CAAiC,CAAC;gBAC/C,GAAG,GAAG,UAAA,GAAG,IAAI,OAAA,GAAG,EAAH,CAAG,CAAC;gBACjB,KAAK,GAAG,UAAA,GAAG,IAAI,OAAA,GAAG,EAAH,CAAG,CAAC;gBACnB,MAAM;YACV;gBACI,MAAM,IAAI,KAAK,CAAC,4BAA0B,MAAM,CAAC,MAAM,CAAC,SAAS,MAAG,CAAC,CAAC;SAC7E;QAED,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,WAAA;YACT,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,KAAA;YACH,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,gBAAA;YACd,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAChF,UAAU,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAC7E,YAAY,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,EAAzD,CAAyD;SACpF,CAAC;IACN,CAAC;IA3Ce,iBAAQ,WA2CvB,CAAA;IAED,SAAgB,WAAW,CAAC,QAAgB,EAAE,MAAqB;QAC/D,OAAO,QAAQ,CAAC,MAAM,CAAC,SAAS,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC,CAAC;IACxD,CAAC;IAFe,oBAAW,cAE1B,CAAA;AACL,CAAC,EA7JgB,QAAQ,KAAR,QAAQ,QA6JxB;AAED,MAAM,UAAU,qBAAqB,CAAC,KAAa,EAAE,IAAY,EAAE,WAAoB,EAAE,aAAwC;IAC7H,IAAM,MAAM,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IACnC,QAAQ,IAAI,EAAE;QACV,KAAK,CAAC;YACF,OAAO,aAAa,KAAK,UAAU;gBAC/B,CAAC,CAAC,UAAC,CAAS,IAAK,OAAG,KAAK,UAAI,CAAC,GAAG,MAAM,OAAG,EAAzB,CAAyB;gBAC1C,CAAC,CAAC,UAAC,CAAS,IAAK,OAAG,KAAK,UAAI,CAAC,GAAG,MAAM,CAAE,EAAxB,CAAwB,CAAC;QAClD,KAAK,CAAC;YACF,OAAO,aAAa,KAAK,UAAU;gBAC/B,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,IAAK,OAAG,KAAK,UAAI,CAAC,GAAG,MAAM,YAAK,CAAC,GAAG,MAAM,OAAG,EAAxC,CAAwC;gBACpE,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,IAAK,OAAG,KAAK,UAAI,CAAC,GAAG,MAAM,KAAG,CAAC,GAAG,MAAM,CAAE,EAArC,CAAqC,CAAC;QAC1E,KAAK,CAAC;YACF,OAAO,aAAa,KAAK,UAAU;gBAC/B,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,EAAE,CAAS,IAAK,OAAG,KAAK,UAAI,CAAC,GAAG,MAAM,YAAK,CAAC,GAAG,MAAM,YAAK,CAAC,GAAG,MAAM,OAAG,EAAvD,CAAuD;gBAC9F,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,EAAE,CAAS,IAAK,OAAG,KAAK,UAAI,CAAC,GAAG,MAAM,KAAG,CAAC,GAAG,MAAM,KAAG,CAAC,GAAG,MAAM,CAAE,EAAlD,CAAkD,CAAC;QAClG;YACI,MAAM,IAAI,KAAK,CAAC,8DAA8D,CAAC,CAAC;KACvF;AACL,CAAC;AAED,MAAM,UAAU,SAAS,CAAC,QAAqB,EAAE,KAAmB,EAAE,GAAW,EAAE,OAAsC;IACrH,IAAM,GAAG,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC;IAE3B,IAAI,KAAK,CAAC,IAAI,KAAK,CAAC,EAAE;QAClB,IAAM,IAAI,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QACjC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,EAAE,CAAC,EAAE,EAAE;YAC3B,IAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;YACxC,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;SAC/C;KACJ;SAAM,IAAI,KAAK,CAAC,IAAI,KAAK,CAAC,EAAE;QACzB,IAAM,IAAI,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,IAAI,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QAC7D,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,EAAE,CAAC,EAAE,EAAE;YAC3B,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,EAAE,CAAC,EAAE,EAAE;gBAC3B,IAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;gBAC3C,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;aAClD;SACJ;KACJ;SAAM,IAAI,KAAK,CAAC,IAAI,KAAK,CAAC,EAAE;QACzB,IAAM,EAAE,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QACnF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;YACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;gBACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;oBACzB,IAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;oBAC9C,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;iBACrD;aACJ;SACJ;KACJ;SAAM;QACH,MAAM,IAAI,KAAK,CAAC,8DAA8D,CAAC,CAAC;KACnF;IACD,OAAO,GAAG,CAAC;AACf,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,KAAe;IAC3C,IAAI,UAAU,GAAG,CAAC,EAAE,qBAAqB,GAAG,KAAK,EAAE,cAAc,GAAG,CAAC,CAAC;IACtE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,QAAQ,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;QAC9C,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;QAC7B,IAAI,CAAC,oBAA6B,EAAE;YAChC,cAAc,EAAE,CAAC;YACjB,SAAS;SACZ;QACD,IAAM,IAAI,GAAG,aAAa,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QACzC,IAAI,IAAI,gBAAmB;YAAE,SAAS;aACjC,IAAI,IAAI,kBAAqB;YAAE,UAAU,EAAE,CAAC;aAC5C;YAAE,qBAAqB,GAAG,IAAI,CAAC;YAAC,MAAM;SAAE;KAChD;IAED,wEAAwE;IACxE,IAAI,qBAAqB,IAAI,cAAc,KAAK,KAAK,CAAC,QAAQ;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,GAAG,CAAC;IACzF,IAAI,UAAU,GAAG,CAAC;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC;IAC/C,OAAO,MAAM,CAAC,MAAM,CAAC,GAAG,CAAC;AAC7B,CAAC"}
1	+ {"version":3,"file":"data-model.js","sourceRoot":"","sources":["../../../../src/mol-io/reader/cif/data-model.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAE,MAAM,EAAE,aAAa,EAAS,MAAM,sBAAsB,CAAC;AAEpE,OAAO,EAAE,aAAa,EAAc,QAAQ,IAAI,YAAY,EAAE,UAAU,IAAI,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAGjI,OAAO,EAAE,sBAAsB,EAAE,MAAM,6BAA6B,CAAC;AAOrE,MAAM,UAAU,OAAO,CAAC,MAA2B,EAAE,IAAa;IAC9D,OAAO,EAAE,IAAI,MAAA,EAAE,MAAM,EAAE,MAAa,EAAE,CAAC;AAC3C,CAAC;AAcD,MAAM,UAAU,QAAQ,CAAC,aAAuB,EAAE,UAAyB,EAAE,MAAc,EAAE,UAA2B;IAA3B,2BAAA,EAAA,eAA2B;IACpH,OAAO;QACH,aAAa,eAAA;QAAE,MAAM,QAAA;QAAE,UAAU,YAAA;QAAE,UAAU,YAAA;QAC7C,QAAQ,EAAR,UAAS,IAAY;YACX,IAAA,KAAoB,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAAlC,QAAQ,QAAA,EAAE,KAAK,QAAmB,CAAC;YAC1C,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,QAAQ,CAAC,KAAK,IAAI,EAAE,CAAC,CAAC;QACtD,CAAC;KACJ,CAAC;AACN,CAAC;AAED,MAAM,UAAU,YAAY,CAAC,aAAuB,EAAE,UAAyB,EAAE,MAAc;IAC3F,OAAO,EAAE,aAAa,eAAA,EAAE,MAAM,QAAA,EAAE,UAAU,YAAA,EAAE,CAAC;AACjD,CAAC;AAYD,MAAM,UAAU,WAAW,CAAC,IAAY,EAAE,QAAgB,EAAE,UAAoB,EAAE,MAAoC;IAClH,OAAO,EAAE,QAAQ,UAAA,EAAE,IAAI,MAAA,EAAE,UAAU,oBAAM,UAAU,OAAC,EAAE,QAAQ,YAAC,IAAI,IAAI,OAAO,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;AACpG,CAAC;AAED,WAAiB,WAAW;IACxB,SAAgB,KAAK,CAAC,IAAY;QAC9B,OAAO,EAAE,QAAQ,EAAE,CAAC,EAAE,IAAI,MAAA,EAAE,UAAU,EAAE,EAAE,EAAE,QAAQ,EAAR,UAAS,IAAY,IAAI,OAAO,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IAC5F,CAAC;IAFe,iBAAK,QAEpB,CAAA;IAAA,CAAC;IAKF,SAAgB,QAAQ,CAAC,IAAY,EAAE,MAAgD;QACnF,IAAM,UAAU,GAAG,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;QACvC,OAAO;YACH,QAAQ,EAAE,UAAU,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC,CAAC,CAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;YACrE,IAAI,MAAA;YACJ,UAAU,YAAA;YACV,QAAQ,YAAC,IAAI,IAAI,OAAO,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;SAC1C,CAAC;IACN,CAAC;IARe,oBAAQ,WAQvB,CAAA;IAED,SAAgB,OAAO,CAAC,IAAY,EAAE,KAAiB;QACnD,IAAM,MAAM,GAA6C,EAAE,CAAC;QAC5D,KAAmB,UAAc,EAAd,KAAA,KAAK,CAAC,QAAQ,EAAd,cAAc,EAAd,IAAc,EAAE;YAA9B,IAAM,MAAI,SAAA;YACX,MAAM,CAAC,MAAI,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAI,CAAC,CAAC,CAAC;SACjD;QACD,OAAO,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC;IAClC,CAAC;IANe,mBAAO,UAMtB,CAAA;AACL,CAAC,EAzBgB,WAAW,KAAX,WAAW,QAyB3B;AA0BD,MAAM,KAAW,QAAQ,CA6JxB;AA7JD,WAAiB,QAAQ;IACrB,SAAgB,QAAQ,CAAC,KAAa;QAClC,OAAO,SAAS,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;IAC9B,CAAC;IAFe,iBAAQ,WAEvB,CAAA;IAED,SAAgB,SAAS,CAAC,MAAyB;QAC/C,IAAM,QAAQ,GAAG,MAAM,CAAC,MAAM,CAAC;QAC/B,IAAM,GAAG,GAAoB,UAAA,GAAG,IAAM,IAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,IAAI,GAAG,KAAK,GAAG,IAAI,GAAG,KAAK,GAAG;YAAE,OAAO,EAAE,CAAC,CAAC,OAAO,GAAG,CAAC,CAAC,CAAC,CAAC;QAChI,IAAM,GAAG,GAAoB,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,YAAY,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;QACzG,IAAM,KAAK,GAAsB,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,cAAc,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;QAC/G,IAAM,SAAS,GAA0B,UAAA,GAAG;YACxC,IAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,CAAC;YACpC,IAAI,CAAC,GAAG,CAAC;gBAAE,uBAAgC;YAC3C,IAAI,CAAC,KAAK,CAAC;gBAAE,0BAAmC;YAChD,IAAM,CAAC,GAAG,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;YAC1B,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,0BAAmC;YACzD,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,uBAAgC;YACtD,uBAAgC;QACpC,CAAC,CAAC;QAEF,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,EAAE,IAAI;YACf,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,KAAA;YACH,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,EAAE,UAAC,IAAI,EAAE,IAAI,IAAK,OAAA,MAAM,CAAC,IAAI,CAAC,KAAK,MAAM,CAAC,IAAI,CAAC,EAA7B,CAA6B;YAC7D,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,MAAM,CAAC,CAAC,CAAC,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,CAAC,CAAC,CAAC,MAAkB,EAArF,CAAqF;YAC9G,UAAU,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAC7E,YAAY,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,EAAzD,CAAyD;SACpF,CAAC;IACN,CAAC;IA7Be,kBAAS,YA6BxB,CAAA;IAED,SAAgB,SAAS,CAAC,MAAyB;QAC/C,IAAM,QAAQ,GAAG,MAAM,CAAC,MAAM,CAAC;QAC/B,IAAM,GAAG,GAAoB,UAAA,GAAG,IAAM,OAAO,EAAE,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QACjE,IAAM,KAAK,GAAsB,UAAA,GAAG,IAAI,OAAA,MAAM,CAAC,GAAG,CAAC,EAAX,CAAW,CAAC;QACpD,IAAM,SAAS,GAA0B,UAAA,GAAG,IAAI,wBAAA,CAAwB,CAAC;QAEzE,IAAM,YAAY,GAAG,UAAC,MAAoC;YACtD,IAAI,CAAC,MAAM,IAAI,MAAM,CAAC,KAAK,IAAI,MAAM,YAAY,MAAM,CAAC,KAAK,EAAE;gBAC3D,OAAO,MAAkB,CAAC;aAC7B;iBAAM;gBACH,OAAO,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,CAAC;aACpE;QACL,CAAC,CAAC;QAEF,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,EAAE,IAAI;YACf,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,EAAE,KAAK;YACV,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,EAAE,UAAC,IAAI,EAAE,IAAI,IAAK,OAAA,MAAM,CAAC,IAAI,CAAC,KAAK,MAAM,CAAC,IAAI,CAAC,EAA7B,CAA6B;YAC7D,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAChF,UAAU,EAAE,YAAY;YACxB,YAAY,cAAA;SACf,CAAC;IACN,CAAC;IA5Be,kBAAS,YA4BxB,CAAA;IAED,SAAgB,QAAQ,CAAC,MAAc;QAC3B,IAAA,IAAI,GAA+B,MAAM,KAArC,EAAE,OAAO,GAAsB,MAAM,QAA5B,EAAS,QAAQ,GAAK,MAAM,MAAX,CAAY;QAElD,IAAM,GAAG,GAAoB,UAAA,GAAG;YAC5B,IAAM,GAAG,GAAG,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC;YACnE,IAAI,GAAG,KAAK,GAAG,IAAI,GAAG,KAAK,GAAG;gBAAE,OAAO,EAAE,CAAC;YAC1C,OAAO,GAAG,CAAC;QACf,CAAC,CAAC;QAEF,IAAM,GAAG,GAAoB,UAAA,GAAG;YAC5B,OAAO,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;QAC3E,CAAC,CAAC;QAEF,IAAM,KAAK,GAAsB,UAAA,GAAG;YAChC,OAAO,cAAc,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;QAC7E,CAAC,CAAC;QAEF,IAAM,SAAS,GAA0B,UAAA,GAAG;YACxC,IAAM,CAAC,GAAG,OAAO,CAAC,CAAC,GAAG,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;YACzD,IAAI,CAAC,GAAG,CAAC;gBAAE,uBAAgC;YAC3C,IAAI,CAAC,KAAK,CAAC;gBAAE,0BAAmC;YAChD,IAAM,CAAC,GAAG,IAAI,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;YAC7B,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,0BAAmC;YACzD,IAAI,CAAC,KAAK,EAAE,CAAC,OAAO;gBAAE,uBAAgC;YACtD,uBAAgC;QACpC,CAAC,CAAC;QAEF,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,EAAE,IAAI;YACf,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,KAAA;YACH,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,EAAE,sBAAsB,CAAC,MAAM,CAAC;YAC9C,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAChF,UAAU,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAC7E,YAAY,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,EAAzD,CAAyD;SACpF,CAAC;IACN,CAAC;IAzCe,iBAAQ,WAyCvB,CAAA;IAED,SAAgB,QAAQ,CAAC,MAAmB;QAChC,IAAA,QAAQ,GAA2C,MAAM,SAAjD,EAAE,SAAS,GAAgC,MAAM,UAAtC,EAAE,cAAc,GAAgB,MAAM,eAAtB,EAAE,SAAS,GAAK,MAAM,UAAX,CAAY;QAElE,IAAI,GAAoB,CAAC;QACzB,IAAI,GAAoB,CAAC;QACzB,IAAI,KAAwB,CAAC;QAE7B,QAAQ,MAAM,CAAC,MAAM,CAAC,SAAS,EAAE;YAC7B,KAAK,OAAO,CAAC;YACb,KAAK,KAAK;gBACN,GAAG,GAAG,UAAA,GAAG,IAAM,OAAO,EAAE,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;gBAChD,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC;gBACnB,KAAK,GAAG,MAAM,CAAC,KAAK,CAAC;gBACrB,MAAM;YACV,KAAK,KAAK;gBACN,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC;gBACnB,GAAG,GAAG,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,YAAY,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;gBACxF,KAAK,GAAG,UAAA,GAAG,IAAM,IAAM,CAAC,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,cAAc,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;gBAC5F,MAAM;YACV,KAAK,MAAM;gBACC,IAAA,WAAS,GAAK,MAAM,CAAC,MAAM,UAAlB,CAAmB;gBACpC,GAAG,GAAG,UAAA,GAAG,IAAI,OAAA,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,WAAS,CAAC,EAAjC,CAAiC,CAAC;gBAC/C,GAAG,GAAG,UAAA,GAAG,IAAI,OAAA,GAAG,EAAH,CAAG,CAAC;gBACjB,KAAK,GAAG,UAAA,GAAG,IAAI,OAAA,GAAG,EAAH,CAAG,CAAC;gBACnB,MAAM;YACV;gBACI,MAAM,IAAI,KAAK,CAAC,iCAA0B,MAAM,CAAC,MAAM,CAAC,SAAS,MAAG,CAAC,CAAC;SAC7E;QAED,OAAO;YACH,OAAO,EAAE,KAAK,CAAC;YACf,cAAc,EAAE,KAAK,CAAC;YACtB,SAAS,WAAA;YACT,QAAQ,UAAA;YACR,GAAG,KAAA;YACH,GAAG,KAAA;YACH,KAAK,OAAA;YACL,SAAS,WAAA;YACT,cAAc,gBAAA;YACd,aAAa,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAChF,UAAU,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,CAAC,EAAvD,CAAuD;YAC7E,YAAY,EAAE,UAAA,MAAM,IAAI,OAAA,aAAa,CAAC,kBAAkB,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,CAAC,EAAzD,CAAyD;SACpF,CAAC;IACN,CAAC;IA3Ce,iBAAQ,WA2CvB,CAAA;IAED,SAAgB,WAAW,CAAC,QAAgB,EAAE,MAAqB;QAC/D,OAAO,QAAQ,CAAC,MAAM,CAAC,SAAS,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC,CAAC;IACxD,CAAC;IAFe,oBAAW,cAE1B,CAAA;AACL,CAAC,EA7JgB,QAAQ,KAAR,QAAQ,QA6JxB;AAED,MAAM,UAAU,qBAAqB,CAAC,KAAa,EAAE,IAAY,EAAE,WAAoB,EAAE,aAAwC;IAC7H,IAAM,MAAM,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IACnC,QAAQ,IAAI,EAAE;QACV,KAAK,CAAC;YACF,OAAO,aAAa,KAAK,UAAU;gBAC/B,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,UAAG,KAAK,cAAI,CAAC,GAAG,MAAM,MAAG,EAAzB,CAAyB;gBAC1C,CAAC,CAAC,UAAC,CAAS,IAAK,OAAA,UAAG,KAAK,cAAI,CAAC,GAAG,MAAM,CAAE,EAAxB,CAAwB,CAAC;QAClD,KAAK,CAAC;YACF,OAAO,aAAa,KAAK,UAAU;gBAC/B,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,IAAK,OAAA,UAAG,KAAK,cAAI,CAAC,GAAG,MAAM,eAAK,CAAC,GAAG,MAAM,MAAG,EAAxC,CAAwC;gBACpE,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,IAAK,OAAA,UAAG,KAAK,cAAI,CAAC,GAAG,MAAM,SAAG,CAAC,GAAG,MAAM,CAAE,EAArC,CAAqC,CAAC;QAC1E,KAAK,CAAC;YACF,OAAO,aAAa,KAAK,UAAU;gBAC/B,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,EAAE,CAAS,IAAK,OAAA,UAAG,KAAK,cAAI,CAAC,GAAG,MAAM,eAAK,CAAC,GAAG,MAAM,eAAK,CAAC,GAAG,MAAM,MAAG,EAAvD,CAAuD;gBAC9F,CAAC,CAAC,UAAC,CAAS,EAAE,CAAS,EAAE,CAAS,IAAK,OAAA,UAAG,KAAK,cAAI,CAAC,GAAG,MAAM,SAAG,CAAC,GAAG,MAAM,SAAG,CAAC,GAAG,MAAM,CAAE,EAAlD,CAAkD,CAAC;QAClG;YACI,MAAM,IAAI,KAAK,CAAC,8DAA8D,CAAC,CAAC;KACvF;AACL,CAAC;AAED,MAAM,UAAU,SAAS,CAAC,QAAqB,EAAE,KAAmB,EAAE,GAAW,EAAE,OAAsC;IACrH,IAAM,GAAG,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC;IAE3B,IAAI,KAAK,CAAC,IAAI,KAAK,CAAC,EAAE;QAClB,IAAM,IAAI,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QACjC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,EAAE,CAAC,EAAE,EAAE;YAC3B,IAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;YACxC,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;SAC/C;KACJ;SAAM,IAAI,KAAK,CAAC,IAAI,KAAK,CAAC,EAAE;QACzB,IAAM,IAAI,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,IAAI,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QAC7D,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,EAAE,CAAC,EAAE,EAAE;YAC3B,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,EAAE,CAAC,EAAE,EAAE;gBAC3B,IAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;gBAC3C,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;aAClD;SACJ;KACJ;SAAM,IAAI,KAAK,CAAC,IAAI,KAAK,CAAC,EAAE;QACzB,IAAM,EAAE,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QACnF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;YACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;gBACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;oBACzB,IAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;oBAC9C,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;iBACrD;aACJ;SACJ;KACJ;SAAM;QACH,MAAM,IAAI,KAAK,CAAC,8DAA8D,CAAC,CAAC;KACnF;IACD,OAAO,GAAG,CAAC;AACf,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,KAAe;IAC3C,IAAI,UAAU,GAAG,CAAC,EAAE,qBAAqB,GAAG,KAAK,EAAE,cAAc,GAAG,CAAC,CAAC;IACtE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,QAAQ,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;QAC9C,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;QAC7B,IAAI,CAAC,oBAA6B,EAAE;YAChC,cAAc,EAAE,CAAC;YACjB,SAAS;SACZ;QACD,IAAM,IAAI,GAAG,aAAa,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QACzC,IAAI,IAAI,gBAAmB;YAAE,SAAS;aACjC,IAAI,IAAI,kBAAqB;YAAE,UAAU,EAAE,CAAC;aAC5C;YAAE,qBAAqB,GAAG,IAAI,CAAC;YAAC,MAAM;SAAE;KAChD;IAED,wEAAwE;IACxE,IAAI,qBAAqB,IAAI,cAAc,KAAK,KAAK,CAAC,QAAQ;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,GAAG,CAAC;IACzF,IAAI,UAAU,GAAG,CAAC;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC;IAC/C,OAAO,MAAM,CAAC,MAAM,CAAC,GAAG,CAAC;AAC7B,CAAC"}

package/lib/mol-io/reader/cif/schema/bird.d.ts CHANGED Viewed

@@ -1,7 +1,7 @@
 /**
  * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
- * Code-generated 'BIRD' schema file. Dictionary versions: mmCIF 5.350, IHM 1.17, CARB draft.
+ * Code-generated 'BIRD' schema file. Dictionary versions: mmCIF 5.352, IHM 1.17, CARB draft.
  *
  * @author molstar/ciftools package
  */
@@ -479,7 +479,7 @@ export declare const BIRD_Schema: {
         /**
          * An identifier for the wwPDB site creating or modifying the molecule.
          */
-        processing_site: Schema.Aliased<"RCSB" | "BMRB" | "PDBJ" | "PDBC" | "PDBe">;
+        processing_site: Schema.Aliased<"RCSB" | "PDBE" | "BMRB" | "PDBJ" | "PDBC">;
         /**
          * The action associated with this audit record.
          */

package/lib/mol-io/reader/cif/schema/bird.js CHANGED Viewed

@@ -1,7 +1,7 @@
 /**
  * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
- * Code-generated 'BIRD' schema file. Dictionary versions: mmCIF 5.350, IHM 1.17, CARB draft.
+ * Code-generated 'BIRD' schema file. Dictionary versions: mmCIF 5.352, IHM 1.17, CARB draft.
  *
  * @author molstar/ciftools package
  */

package/lib/mol-io/reader/cif/schema/ccd.d.ts CHANGED Viewed

@@ -1,7 +1,7 @@
 /**
  * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
- * Code-generated 'CCD' schema file. Dictionary versions: mmCIF 5.350, IHM 1.17, CARB draft.
+ * Code-generated 'CCD' schema file. Dictionary versions: mmCIF 5.352, IHM 1.17, CARB draft.
  *
  * @author molstar/ciftools package
  */

package/lib/mol-io/reader/cif/schema/ccd.js CHANGED Viewed

@@ -1,7 +1,7 @@
 /**
  * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
- * Code-generated 'CCD' schema file. Dictionary versions: mmCIF 5.350, IHM 1.17, CARB draft.
+ * Code-generated 'CCD' schema file. Dictionary versions: mmCIF 5.352, IHM 1.17, CARB draft.
  *
  * @author molstar/ciftools package
  */

package/lib/mol-io/reader/cif/schema/cif-core.d.ts CHANGED Viewed

@@ -106,7 +106,7 @@ export declare const CifCore_Schema: {
      * Abstracts. This ordering is used in _chemical_formula.moiety
      * and _chemical_formula.sum.
      *
-     * _chemical_formula.iupac      '[Mo (C O)4 (C18 H33 P)2]'
+     * _chemical_formula.IUPAC      '[Mo (C O)4 (C18 H33 P)2]'
      * _chemical_formula.moiety     'C40 H66 Mo O4 P2'
      * _chemical_formula.structural '((C O)4 (P (C6 H11)3)2)Mo'
      * _chemical_formula.sum         'C40 H66 Mo O4 P2'
@@ -138,7 +138,7 @@ export declare const CifCore_Schema: {
         sum: Schema.Str;
         /**
          * Mass corresponding to the formulae _chemical_formula.structural,
-         * *_iupac, *_moiety or *_sum and, together with the Z value and cell
+         * *_IUPAC, *_moiety or *_sum and, together with the Z value and cell
          * parameters yield the density given as _exptl_crystal.density_diffrn.
          */
         weight: Schema.Float;
@@ -470,7 +470,7 @@ export declare const CifCore_Schema: {
          * A concatenated series of single-letter codes which indicate the
          * refinement restraints or constraints applied to this site. This
          * item should not be used. It has been replaced by
-         * _atom_site.refinement_flags_posn, _adp and _occupancy. It is
+         * _atom_site.refinement_flags_posn, _ADP and _occupancy. It is
          * retained in this dictionary only to provide compatibility with
          * legacy CIFs.
          */
@@ -497,9 +497,9 @@ export declare const CifCore_Schema: {
          * atomic  displacement parameter, U(equiv), in angstroms squared,
          * calculated from anisotropic atomic displacement  parameters.
          *
-         * U(equiv) = (1/3) sum~i~[sum~j~(U^ij^ a*~i~ a*~j~ a~i~ a~j~)]
+         * U(equiv) = (1/3) sum~i~[sum~j~(U^ij^ a*~i~ a*~j~ a~i~.a~j~)]
          *
-         * a  = the real-space cell lengths
+         * a  = the real-space cell vectors
          * a* = the reciprocal-space cell lengths
          * Ref: Fischer, R. X. & Tillmanns, E. (1988). Acta Cryst. C44, 775-776.
          */
@@ -659,8 +659,11 @@ export declare const CifCore_Aliases: {
     'geom_bond.atom_site_label_1': string[];
     'geom_bond.atom_site_label_2': string[];
     'geom_bond.distance': string[];
+    'audit.block_doi': string[];
     'database_code.cod': string[];
     'database_code.csd': string[];
+    'database_code.depnum_ccdc_archive': string[];
+    'database_code.depnum_ccdc_fiz': string[];
     'database_code.icsd': string[];
     'database_code.mdf': string[];
     'database_code.nbs': string[];

package/lib/mol-io/reader/cif/schema/cif-core.js CHANGED Viewed

@@ -110,7 +110,7 @@ export var CifCore_Schema = {
      * Abstracts. This ordering is used in _chemical_formula.moiety
      * and _chemical_formula.sum.
      *
-     * _chemical_formula.iupac      '[Mo (C O)4 (C18 H33 P)2]'
+     * _chemical_formula.IUPAC      '[Mo (C O)4 (C18 H33 P)2]'
      * _chemical_formula.moiety     'C40 H66 Mo O4 P2'
      * _chemical_formula.structural '((C O)4 (P (C6 H11)3)2)Mo'
      * _chemical_formula.sum         'C40 H66 Mo O4 P2'
@@ -142,7 +142,7 @@ export var CifCore_Schema = {
         sum: str,
         /**
          * Mass corresponding to the formulae _chemical_formula.structural,
-         * *_iupac, *_moiety or *_sum and, together with the Z value and cell
+         * *_IUPAC, *_moiety or *_sum and, together with the Z value and cell
          * parameters yield the density given as _exptl_crystal.density_diffrn.
          */
         weight: float,
@@ -474,7 +474,7 @@ export var CifCore_Schema = {
          * A concatenated series of single-letter codes which indicate the
          * refinement restraints or constraints applied to this site. This
          * item should not be used. It has been replaced by
-         * _atom_site.refinement_flags_posn, _adp and _occupancy. It is
+         * _atom_site.refinement_flags_posn, _ADP and _occupancy. It is
          * retained in this dictionary only to provide compatibility with
          * legacy CIFs.
          */
@@ -501,9 +501,9 @@ export var CifCore_Schema = {
          * atomic  displacement parameter, U(equiv), in angstroms squared,
          * calculated from anisotropic atomic displacement  parameters.
          *
-         * U(equiv) = (1/3) sum~i~[sum~j~(U^ij^ a*~i~ a*~j~ a~i~ a~j~)]
+         * U(equiv) = (1/3) sum~i~[sum~j~(U^ij^ a*~i~ a*~j~ a~i~.a~j~)]
          *
-         * a  = the real-space cell lengths
+         * a  = the real-space cell vectors
          * a* = the reciprocal-space cell lengths
          * Ref: Fischer, R. X. & Tillmanns, E. (1988). Acta Cryst. C44, 775-776.
          */
@@ -678,12 +678,21 @@ export var CifCore_Aliases = {
     'geom_bond.distance': [
         'geom_bond_dist',
     ],
+    'audit.block_doi': [
+        'audit_block_DOI',
+    ],
     'database_code.cod': [
         'database_code_COD',
     ],
     'database_code.csd': [
         'database_code_CSD',
     ],
+    'database_code.depnum_ccdc_archive': [
+        'database_code_depnum_CCDC_archive',
+    ],
+    'database_code.depnum_ccdc_fiz': [
+        'database_code_depnum_CCDC_fiz',
+    ],
     'database_code.icsd': [
         'database_code_ICSD',
     ],
@@ -694,6 +703,7 @@ export var CifCore_Aliases = {
         'database_code_NBS',
     ],
     'atom_site.adp_type': [
+        'atom_site_ADP_type',
         'atom_site_thermal_displace_type',
     ],
     'atom_site.label': [

package/lib/mol-io/reader/cif/schema/cif-core.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"cif-core.js","sourceRoot":"","sources":["../../../../../src/mol-io/reader/cif/schema/cif-core.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,EAAY,MAAM,EAAE,MAAM,yBAAyB,CAAC;AAE3D,IAAO,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;AAE9B,IAAM,KAAK,GAAG,MAAM,CAAC,KAAK,CAAC;AAC3B,IAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC;AACvB,IAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC;AACvB,IAAM,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;AAE7B,MAAM,CAAC,IAAM,cAAc,GAAG;IAC1B;;;OAGG;IACH,IAAI,EAAE;QACF;;WAEG;QACH,WAAW,EAAE,KAAK;QAClB;;WAEG;QACH,UAAU,EAAE,KAAK;QACjB;;WAEG;QACH,WAAW,EAAE,KAAK;QAClB;;;;WAIG;QACH,eAAe,EAAE,GAAG;QACpB;;WAEG;QACH,QAAQ,EAAE,KAAK;QACf;;WAEG;QACH,QAAQ,EAAE,KAAK;QACf;;WAEG;QACH,QAAQ,EAAE,KAAK;QACf;;WAEG;QACH,MAAM,EAAE,KAAK;KAChB;IACD;;;;OAIG;IACH,QAAQ,EAAE;QACN;;WAEG;QACH,aAAa,EAAE,KAAK;QACpB;;WAEG;QACH,WAAW,EAAE,GAAG;QAChB;;WAEG;QACH,eAAe,EAAE,GAAG;KACvB;IACD;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;OA4CG;IACH,gBAAgB,EAAE;QACd;;;;;;;;;;;;;;;WAeG;QACH,MAAM,EAAE,GAAG;QACX;;;;WAIG;QACH,GAAG,EAAE,GAAG;QACR;;;;WAIG;QACH,MAAM,EAAE,KAAK;KAChB;IACD;;;;;;;;;;;;;;;;;;;;;;OAsBG;IACH,WAAW,EAAE;QACT;;;;;WAKG;QACH,cAAc,EAAE,GAAG;QACnB;;;;;;WAMG;QACH,SAAS,EAAE,GAAG;QACd;;;;;;;;;;;;;;;;;;;;;;;;;;;;;WA6BG;QACH,eAAe,EAAE,GAAG;KACvB;IACD;;;OAGG;IACH,iBAAiB,EAAE;QACf;;;;;;;;;;;;;;;;;;;;;;;;;;WA0BG;QACH,aAAa,EAAE,GAAG;KACrB;IACD;;;OAGG;IACH,SAAS,EAAE;QACP;;;WAGG;QACH,iBAAiB,EAAE,GAAG;QACtB;;;WAGG;QACH,iBAAiB,EAAE,GAAG;QACtB;;;WAGG;QACH,QAAQ,EAAE,KAAK;QACf;;;WAGG;QACH,SAAS,EAAE,GAAG;QACd;;;;;;;;;;;;;;;;;;;;;WAqBG;QACH,eAAe,EAAE,GAAG;QACpB;;;;;;;;;;;;;;;;;;;;;WAqBG;QACH,eAAe,EAAE,GAAG;QACpB;;WAEG;QACH,OAAO,EAAE,KAAK;KACjB;IACD;;;OAGG;IACH,KAAK,EAAE;QACH;;;;;;;;;;;;;;;;;;;WAmBG;QACH,SAAS,EAAE,GAAG;KACjB;IACD;;;;OAIG;IACH,aAAa,EAAE;QACX;;WAEG;QACH,GAAG,EAAE,GAAG;QACR;;WAEG;QACH,GAAG,EAAE,GAAG;QACR;;;;WAIG;QACH,mBAAmB,EAAE,GAAG;QACxB;;;;WAIG;QACH,eAAe,EAAE,GAAG;QACpB;;WAEG;QACH,IAAI,EAAE,GAAG;QACT;;WAEG;QACH,GAAG,EAAE,GAAG;QACR;;WAEG;QACH,GAAG,EAAE,GAAG;KACX;IACD;;;OAGG;IACH,SAAS,EAAE;QACP;;WAEG;QACH,QAAQ,EAAE,GAAG;QACb;;;;WAIG;QACH,SAAS,EAAE,GAAG;QACd;;;;;;;WAOG;QACH,iBAAiB,EAAE,GAAG;QACtB;;;;;;;;;WASG;QACH,cAAc,EAAE,GAAG;QACnB;;WAEG;QACH,OAAO,EAAE,KAAK;QACd;;WAEG;QACH,OAAO,EAAE,KAAK;QACd;;WAEG;QACH,OAAO,EAAE,KAAK;QACd;;;;;;;;;;;;;;;;;;WAkBG;QACH,KAAK,EAAE,GAAG;QACV;;;;;;;WAOG;QACH,SAAS,EAAE,KAAK;QAChB;;;;;;;WAOG;QACH,gBAAgB,EAAE,GAAG;QACrB;;;;;;;;WAQG;QACH,0BAA0B,EAAE,GAAG;QAC/B;;;;;WAKG;QACH,WAAW,EAAE,GAAG;QAChB;;;;;;;;;;WAUG;QACH,cAAc,EAAE,KAAK;KACxB;IACD;;;OAGG;IACH,eAAe,EAAE;QACb;;;;;WAKG;QACH,KAAK,EAAE,GAAG;QACV;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,CAAC,EAAE,MAAM,CAAC,CAAC,EAAE,CAAC,CAAC;QACf;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;KACd;IACD;;;OAGG;IACH,SAAS,EAAE;QACP;;;;;WAKG;QACH,WAAW,EAAE,GAAG;QAChB;;;;;;WAMG;QACH,MAAM,EAAE,GAAG;KACd;IACD;;;OAGG;IACH,cAAc,EAAE;QACZ;;;WAGG;QACH,eAAe,EAAE,KAAK;QACtB;;;WAGG;QACH,eAAe,EAAE,KAAK;QACtB;;WAEG;QACH,MAAM,EAAE,GAAG;KACd;CACJ,CAAC;AAEF,MAAM,CAAC,IAAM,eAAe,GAAG;IAC3B,sBAAsB,EAAE;QACpB,sBAAsB;KACzB;IACD,uBAAuB,EAAE;QACrB,uBAAuB;QACvB,4BAA4B;KAC/B;IACD,2BAA2B,EAAE;QACzB,+BAA+B;KAClC;IACD,iCAAiC,EAAE;QAC/B,2BAA2B;KAC9B;IACD,6BAA6B,EAAE;QAC3B,0BAA0B;KAC7B;IACD,6BAA6B,EAAE;QAC3B,0BAA0B;KAC7B;IACD,oBAAoB,EAAE;QAClB,gBAAgB;KACnB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,oBAAoB,EAAE;QAClB,oBAAoB;KACvB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,oBAAoB,EAAE;QAClB,iCAAiC;KACpC;IACD,iBAAiB,EAAE;QACf,cAAc;KACjB;IACD,sCAAsC,EAAE;QACpC,iCAAiC;KACpC;IACD,0BAA0B,EAAE;QACxB,0BAA0B;KAC7B;IACD,uBAAuB,EAAE;QACrB,wBAAwB;KAC3B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;CACJ,CAAC;AAGmE,CAAC"}
1	+ {"version":3,"file":"cif-core.js","sourceRoot":"","sources":["../../../../../src/mol-io/reader/cif/schema/cif-core.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,EAAY,MAAM,EAAE,MAAM,yBAAyB,CAAC;AAE3D,IAAO,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;AAE9B,IAAM,KAAK,GAAG,MAAM,CAAC,KAAK,CAAC;AAC3B,IAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC;AACvB,IAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC;AACvB,IAAM,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;AAE7B,MAAM,CAAC,IAAM,cAAc,GAAG;IAC1B;;;OAGG;IACH,IAAI,EAAE;QACF;;WAEG;QACH,WAAW,EAAE,KAAK;QAClB;;WAEG;QACH,UAAU,EAAE,KAAK;QACjB;;WAEG;QACH,WAAW,EAAE,KAAK;QAClB;;;;WAIG;QACH,eAAe,EAAE,GAAG;QACpB;;WAEG;QACH,QAAQ,EAAE,KAAK;QACf;;WAEG;QACH,QAAQ,EAAE,KAAK;QACf;;WAEG;QACH,QAAQ,EAAE,KAAK;QACf;;WAEG;QACH,MAAM,EAAE,KAAK;KAChB;IACD;;;;OAIG;IACH,QAAQ,EAAE;QACN;;WAEG;QACH,aAAa,EAAE,KAAK;QACpB;;WAEG;QACH,WAAW,EAAE,GAAG;QAChB;;WAEG;QACH,eAAe,EAAE,GAAG;KACvB;IACD;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;OA4CG;IACH,gBAAgB,EAAE;QACd;;;;;;;;;;;;;;;WAeG;QACH,MAAM,EAAE,GAAG;QACX;;;;WAIG;QACH,GAAG,EAAE,GAAG;QACR;;;;WAIG;QACH,MAAM,EAAE,KAAK;KAChB;IACD;;;;;;;;;;;;;;;;;;;;;;OAsBG;IACH,WAAW,EAAE;QACT;;;;;WAKG;QACH,cAAc,EAAE,GAAG;QACnB;;;;;;WAMG;QACH,SAAS,EAAE,GAAG;QACd;;;;;;;;;;;;;;;;;;;;;;;;;;;;;WA6BG;QACH,eAAe,EAAE,GAAG;KACvB;IACD;;;OAGG;IACH,iBAAiB,EAAE;QACf;;;;;;;;;;;;;;;;;;;;;;;;;;WA0BG;QACH,aAAa,EAAE,GAAG;KACrB;IACD;;;OAGG;IACH,SAAS,EAAE;QACP;;;WAGG;QACH,iBAAiB,EAAE,GAAG;QACtB;;;WAGG;QACH,iBAAiB,EAAE,GAAG;QACtB;;;WAGG;QACH,QAAQ,EAAE,KAAK;QACf;;;WAGG;QACH,SAAS,EAAE,GAAG;QACd;;;;;;;;;;;;;;;;;;;;;WAqBG;QACH,eAAe,EAAE,GAAG;QACpB;;;;;;;;;;;;;;;;;;;;;WAqBG;QACH,eAAe,EAAE,GAAG;QACpB;;WAEG;QACH,OAAO,EAAE,KAAK;KACjB;IACD;;;OAGG;IACH,KAAK,EAAE;QACH;;;;;;;;;;;;;;;;;;;WAmBG;QACH,SAAS,EAAE,GAAG;KACjB;IACD;;;;OAIG;IACH,aAAa,EAAE;QACX;;WAEG;QACH,GAAG,EAAE,GAAG;QACR;;WAEG;QACH,GAAG,EAAE,GAAG;QACR;;;;WAIG;QACH,mBAAmB,EAAE,GAAG;QACxB;;;;WAIG;QACH,eAAe,EAAE,GAAG;QACpB;;WAEG;QACH,IAAI,EAAE,GAAG;QACT;;WAEG;QACH,GAAG,EAAE,GAAG;QACR;;WAEG;QACH,GAAG,EAAE,GAAG;KACX;IACD;;;OAGG;IACH,SAAS,EAAE;QACP;;WAEG;QACH,QAAQ,EAAE,GAAG;QACb;;;;WAIG;QACH,SAAS,EAAE,GAAG;QACd;;;;;;;WAOG;QACH,iBAAiB,EAAE,GAAG;QACtB;;;;;;;;;WASG;QACH,cAAc,EAAE,GAAG;QACnB;;WAEG;QACH,OAAO,EAAE,KAAK;QACd;;WAEG;QACH,OAAO,EAAE,KAAK;QACd;;WAEG;QACH,OAAO,EAAE,KAAK;QACd;;;;;;;;;;;;;;;;;;WAkBG;QACH,KAAK,EAAE,GAAG;QACV;;;;;;;WAOG;QACH,SAAS,EAAE,KAAK;QAChB;;;;;;;WAOG;QACH,gBAAgB,EAAE,GAAG;QACrB;;;;;;;;WAQG;QACH,0BAA0B,EAAE,GAAG;QAC/B;;;;;WAKG;QACH,WAAW,EAAE,GAAG;QAChB;;;;;;;;;;WAUG;QACH,cAAc,EAAE,KAAK;KACxB;IACD;;;OAGG;IACH,eAAe,EAAE;QACb;;;;;WAKG;QACH,KAAK,EAAE,GAAG;QACV;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,CAAC,EAAE,MAAM,CAAC,CAAC,EAAE,CAAC,CAAC;QACf;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;QACX;;;;;;;;;;;WAWG;QACH,IAAI,EAAE,KAAK;KACd;IACD;;;OAGG;IACH,SAAS,EAAE;QACP;;;;;WAKG;QACH,WAAW,EAAE,GAAG;QAChB;;;;;;WAMG;QACH,MAAM,EAAE,GAAG;KACd;IACD;;;OAGG;IACH,cAAc,EAAE;QACZ;;;WAGG;QACH,eAAe,EAAE,KAAK;QACtB;;;WAGG;QACH,eAAe,EAAE,KAAK;QACtB;;WAEG;QACH,MAAM,EAAE,GAAG;KACd;CACJ,CAAC;AAEF,MAAM,CAAC,IAAM,eAAe,GAAG;IAC3B,sBAAsB,EAAE;QACpB,sBAAsB;KACzB;IACD,uBAAuB,EAAE;QACrB,uBAAuB;QACvB,4BAA4B;KAC/B;IACD,2BAA2B,EAAE;QACzB,+BAA+B;KAClC;IACD,iCAAiC,EAAE;QAC/B,2BAA2B;KAC9B;IACD,6BAA6B,EAAE;QAC3B,0BAA0B;KAC7B;IACD,6BAA6B,EAAE;QAC3B,0BAA0B;KAC7B;IACD,oBAAoB,EAAE;QAClB,gBAAgB;KACnB;IACD,iBAAiB,EAAE;QACf,iBAAiB;KACpB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,mCAAmC,EAAE;QACjC,mCAAmC;KACtC;IACD,+BAA+B,EAAE;QAC7B,+BAA+B;KAClC;IACD,oBAAoB,EAAE;QAClB,oBAAoB;KACvB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,mBAAmB,EAAE;QACjB,mBAAmB;KACtB;IACD,oBAAoB,EAAE;QAClB,oBAAoB;QACpB,iCAAiC;KACpC;IACD,iBAAiB,EAAE;QACf,cAAc;KACjB;IACD,sCAAsC,EAAE;QACpC,iCAAiC;KACpC;IACD,0BAA0B,EAAE;QACxB,0BAA0B;KAC7B;IACD,uBAAuB,EAAE;QACrB,wBAAwB;KAC3B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;IACD,sBAAsB,EAAE;QACpB,sBAAsB;QACtB,0BAA0B;KAC7B;CACJ,CAAC;AAGmE,CAAC"}

package/lib/mol-io/reader/cif/schema/density-server.d.ts CHANGED Viewed

@@ -10,12 +10,12 @@ export declare const DensityServer_Header_Schema: {
         server_version: Schema.Str;
         datetime_utc: Schema.Str;
         guid: Schema.Str;
-        is_empty: Schema.Aliased<"no" | "n" | "yes" | "y">;
-        has_error: Schema.Aliased<"no" | "n" | "yes" | "y">;
+        is_empty: Schema.Aliased<"y" | "no" | "n" | "yes">;
+        has_error: Schema.Aliased<"y" | "no" | "n" | "yes">;
         error: Schema.Str;
         query_source_id: Schema.Str;
-        query_type: Schema.Aliased<"cell" | "box">;
-        query_box_type: Schema.Aliased<"fractional" | "cartesian">;
+        query_type: Schema.Aliased<"box" | "cell">;
+        query_box_type: Schema.Aliased<"cartesian" | "fractional">;
         query_box_a: Schema.Tensor;
         query_box_b: Schema.Tensor;
     };

package/lib/mol-io/reader/cif/schema/mmcif.d.ts CHANGED Viewed

@@ -1,7 +1,7 @@
 /**
  * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
- * Code-generated 'mmCIF' schema file. Dictionary versions: mmCIF 5.350, IHM 1.17, CARB draft.
+ * Code-generated 'mmCIF' schema file. Dictionary versions: mmCIF 5.352, IHM 1.17, CARB draft.
  *
  * @author molstar/ciftools package
  */
@@ -1974,7 +1974,7 @@ export declare const mmCIF_Schema: {
          * The value of occupancy flag indicates whether the residue
          * is unobserved (= 1) or the coordinates have an occupancy of zero (=0)
          */
-        occupancy_flag: Schema.Aliased<"0" | "1">;
+        occupancy_flag: Schema.Aliased<"1" | "0">;
         /**
          * Part of the identifier for the unobserved or zero occupancy residue.
          *
@@ -3343,7 +3343,7 @@ export declare const mmCIF_Schema: {
         /**
          * The type of post modeling analysis being carried out.
          */
-        type: Schema.Aliased<"filter" | "other" | "cluster" | "rescore" | "validation" | "none">;
+        type: Schema.Aliased<"other" | "filter" | "cluster" | "rescore" | "validation" | "none">;
         /**
          * The parameter/feature used in the post modeling analysis.
          */
@@ -3566,7 +3566,7 @@ export declare const mmCIF_Schema: {
         /**
          * The application / utilization of the dataset group in modeling.
          */
-        application: Schema.Aliased<"filter" | "other" | "validation" | "restraint" | "representation" | "sampling">;
+        application: Schema.Aliased<"other" | "filter" | "validation" | "restraint" | "representation" | "sampling">;
         /**
          * Additional details regarding the dataset group.
          */

package/lib/mol-io/reader/cif/schema/mmcif.js CHANGED Viewed

@@ -1,7 +1,7 @@
 /**
  * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
- * Code-generated 'mmCIF' schema file. Dictionary versions: mmCIF 5.350, IHM 1.17, CARB draft.
+ * Code-generated 'mmCIF' schema file. Dictionary versions: mmCIF 5.352, IHM 1.17, CARB draft.
  *
  * @author molstar/ciftools package
  */

package/lib/mol-io/reader/cif/schema.js CHANGED Viewed

@@ -21,7 +21,7 @@ export var FieldPath;
     FieldPath.equal = equal;
     function create(category, field, asCanonical) {
         if (asCanonical === void 0) { asCanonical = false; }
-        var p = "" + category + (field ? "." + field : '');
+        var p = "".concat(category).concat(field ? ".".concat(field) : '');
         return asCanonical ? canonical(p) : p;
     }
     FieldPath.create = create;
@@ -80,13 +80,13 @@ function createListColumn(schema, category, key) {
 }
 function createTensorColumn(schema, category, key) {
     var space = schema.space;
-    var zeroOffset = (category.fieldNames.includes(key + "[0]") ||
-        category.fieldNames.includes(key + "[0][0]") ||
-        category.fieldNames.includes(key + "[0][0][0]"));
+    var zeroOffset = (category.fieldNames.includes("".concat(key, "[0]")) ||
+        category.fieldNames.includes("".concat(key, "[0][0]")) ||
+        category.fieldNames.includes("".concat(key, "[0][0][0]")));
     var fst = zeroOffset ? 0 : 1;
-    var namingVariant = (category.fieldNames.includes(key + "_1") ||
-        category.fieldNames.includes(key + "_11") ||
-        category.fieldNames.includes(key + "_111")) ? 'underscore' : 'brackets';
+    var namingVariant = (category.fieldNames.includes("".concat(key, "_1")) ||
+        category.fieldNames.includes("".concat(key, "_11")) ||
+        category.fieldNames.includes("".concat(key, "_111"))) ? 'underscore' : 'brackets';
     var getName = Data.tensorFieldNameGetter(key, space.rank, zeroOffset, namingVariant);
     var first = category.getField(getName(fst, fst, fst)) || Column.Undefined(category.rowCount, schema);
     var value = function (row) { return Data.getTensor(category, space, row, getName); };