molstar 2.3.6 → 2.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/index.d.ts +1 -1
- package/lib/apps/viewer/index.js +3 -3
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +20 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/viewer/index.d.ts +8 -8
- package/lib/commonjs/apps/viewer/index.js +3 -3
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +20 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/model.js +15 -15
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/state.js +5 -5
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.js +4 -4
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +3 -3
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +28 -18
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +31 -2
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js +87 -15
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +27 -18
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/ui.js +24 -20
- package/lib/commonjs/extensions/geo-export/ui.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +31 -21
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +2 -2
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/ui.js +7 -6
- package/lib/commonjs/extensions/mp4-export/ui.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +22 -21
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -5
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
- package/lib/commonjs/mol-canvas3d/canvas3d.js +3 -3
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/draw.js +3 -11
- package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +13 -1
- package/lib/commonjs/mol-geo/geometry/base.js +37 -2
- package/lib/commonjs/mol-geo/geometry/base.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +9 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +154 -35
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +0 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +7 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +162 -27
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/transparency-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +4 -4
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +1 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -3
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/util.d.ts +25 -6
- package/lib/commonjs/mol-gl/compute/util.js +76 -21
- package/lib/commonjs/mol-gl/compute/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/image.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/lines.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/mesh.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/points.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/schema.d.ts +16 -0
- package/lib/commonjs/mol-gl/renderable/schema.js +8 -0
- package/lib/commonjs/mol-gl/renderable/schema.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/spheres.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/text.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +22 -13
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js +1 -1
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
- package/lib/commonjs/mol-gl/renderer.js +3 -0
- package/lib/commonjs/mol-gl/renderer.js.map +1 -1
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +2 -2
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +2 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +2 -2
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/shader.js +3 -3
- package/lib/commonjs/mol-gl/webgl/shader.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/state.d.ts +4 -1
- package/lib/commonjs/mol-gl/webgl/state.js +25 -1
- package/lib/commonjs/mol-gl/webgl/state.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/texture.js +2 -2
- package/lib/commonjs/mol-gl/webgl/texture.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/uniform.js +2 -2
- package/lib/commonjs/mol-gl/webgl/uniform.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/vertex-array.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js +9 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js.map +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js.map +1 -1
- package/lib/commonjs/mol-io/common/typed-array.d.ts +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js.map +1 -1
- package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js +51 -0
- package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js.map +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/data-model.js +7 -7
- package/lib/commonjs/mol-io/reader/cif/data-model.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.d.ts +8 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js +15 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +4 -4
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema.js +7 -7
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- package/lib/servers/volume/server/query/execute.js +5 -5
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- package/lib/servers/volume/server/version.js +1 -1
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- package/lib/servers/volume/server/web-schema.js +6 -6
- package/lib/servers/volume/server/web-schema.js.map +1 -1
- package/lib/servers/volume/server.js +2 -2
- package/lib/servers/volume/server.js.map +1 -1
- package/lib/tests/browser/font-atlas.js +1 -1
- package/lib/tests/browser/font-atlas.js.map +1 -1
- package/lib/tests/browser/render-shape.js +1 -1
- package/lib/tests/browser/render-shape.js.map +1 -1
- package/lib/tests/browser/render-structure.js +1 -1
- package/lib/tests/browser/render-structure.js.map +1 -1
- package/lib/tsconfig.commonjs.tsbuildinfo +1 -1
- package/package.json +29 -30
- package/CHANGELOG.md +0 -191
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1
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+
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YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,UAAU,GAAG,IAAI,CAAC;YACnF,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACjF,IAAI,QAAQ,CAAC,gBAAgB,KAAK,YAAY,CAAC,gBAAgB;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAC7F,IAAI,QAAQ,CAAC,MAAM,KAAK,YAAY,CAAC,MAAM;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACzE,IAAI,QAAQ,CAAC,YAAY,KAAK,YAAY,CAAC,YAAY;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACrF,IAAI,QAAQ,CAAC,eAAe,KAAK,YAAY,CAAC,eAAe;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAC3F,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAEjF,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACjF,IAAI,QAAQ,CAAC,WAAW,KAAK,YAAY,CAAC,WAAW;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACnF,IAAI,QAAQ,CAAC,SAAS,KAAK,YAAY,CAAC,SAAS;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YAC/E,IAAI,QAAQ,CAAC,WAAW,KAAK,YAAY,CAAC,WAAW;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;YACnF,IAAI,QAAQ,CAAC,UAAU,KAAK,YAAY,CAAC,UAAU;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;QACrF,CAAC,EACD,aAAa,EAAE,WAAI,CAAC,KAAK,KAC1B,UAAU,CAAC,CAAC;AACnB,CAAC;AArBD,8CAqBC;AAED,gBAAgB;AAEH,QAAA,yBAAyB,mDAAQ,oCAA2B,GAAK,wBAAe,EAAG;AAKhG,SAAgB,yBAAyB,CAAsC,OAA4C,EAAE,UAAkB;IAC3I,OAAO,aAAa,iDACb,OAAO,KACV,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAsB,EAAE,YAA0B,EAAE,QAAe,EAAE,YAAmB,EAAE,YAAuB,EAAE,gBAA2B;YACrL,OAAO,CAAC,cAAc,CAAC,KAAK,EAAE,QAAQ,EAAE,YAAY,EAAE,QAAQ,EAAE,YAAY,EAAE,YAAY,EAAE,gBAAgB,CAAC,CAAC;YAC9G,IAAI,CAAC,gBAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;QAC3F,CAAC,EACD,aAAa,EAAE,4BAAY,CAAC,KAAK,KAClC,UAAU,CAAC,CAAC;AACnB,CAAC;AATD,8DASC;AAED,eAAe;AAEF,QAAA,wBAAwB,mDAAQ,mCAA0B,GAAK,wBAAe,EAAG;AAK9F,SAAgB,wBAAwB,CAAqC,OAA2C,EAAE,UAAkB;IACxI,OAAO,aAAa,iDACb,OAAO,KACV,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAsB,EAAE,YAA0B,EAAE,QAAe,EAAE,YAAmB,EAAE,YAAuB,EAAE,gBAA2B;YACrL,OAAO,CAAC,cAAc,CAAC,KAAK,EAAE,QAAQ,EAAE,YAAY,EAAE,QAAQ,EAAE,YAAY,EAAE,YAAY,EAAE,gBAAgB,CAAC,CAAC;YAC9G,IAAI,CAAC,gBAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;gBAAE,KAAK,CAAC,cAAc,GAAG,IAAI,CAAC;QAC3F,CAAC,EACD,aAAa,EAAE,0BAAW,CAAC,KAAK,KACjC,UAAU,CAAC,CAAC;AACnB,CAAC;AATD,4DASC"}
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@@ -6,9 +6,9 @@
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6
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*/
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7
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import { ParamDefinition as PD } from '../../mol-util/param-definition';
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8
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import { UnitKind } from './visual/util/common';
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9
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-
export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"
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+
export declare function getUnitKindsParam(defaultValue: UnitKind[]): PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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export declare const StructureParams: {
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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};
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export declare type StructureParams = typeof StructureParams;
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@@ -14,7 +14,7 @@ export declare namespace StructureRepresentationRegistry {
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cartoon: import("./representation").StructureRepresentationProvider<{
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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17
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-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -28,7 +28,7 @@ export declare namespace StructureRepresentationRegistry {
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aspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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arrowFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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tubularHelices: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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-
helixProfile: import("../../mol-util/param-definition").ParamDefinition.Select<"
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+
helixProfile: import("../../mol-util/param-definition").ParamDefinition.Select<"elliptical" | "rounded" | "square">;
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linearSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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}, "cartoon">;
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backbone: import("./representation").StructureRepresentationProvider<{
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@@ -36,7 +36,7 @@ export declare namespace StructureRepresentationRegistry {
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36
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
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37
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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39
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-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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39
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+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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40
40
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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41
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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42
42
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -50,7 +50,7 @@ export declare namespace StructureRepresentationRegistry {
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50
50
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}, "backbone">;
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51
51
|
'ball-and-stick': import("./representation").StructureRepresentationProvider<{
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52
52
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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53
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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53
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+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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54
54
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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55
55
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sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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56
56
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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@@ -96,7 +96,7 @@ export declare namespace StructureRepresentationRegistry {
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96
96
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dashCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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97
97
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stubCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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98
98
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radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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|
99
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
|
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99
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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100
100
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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101
101
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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102
102
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -112,7 +112,7 @@ export declare namespace StructureRepresentationRegistry {
|
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|
112
112
|
ellipsoid: import("./representation").StructureRepresentationProvider<{
|
|
113
113
|
includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
114
114
|
adjustCylinderLength: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
115
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
|
|
115
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
116
116
|
sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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117
117
|
sizeAspectRatio: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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118
118
|
linkCap: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
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@@ -152,14 +152,14 @@ export declare namespace StructureRepresentationRegistry {
|
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|
152
152
|
resolution: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
153
153
|
radiusOffset: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
154
154
|
smoothness: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
155
|
-
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
|
|
155
|
+
unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
156
156
|
alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
|
|
157
157
|
quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
158
158
|
tryUseGpu: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
159
|
-
smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "
|
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159
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+
smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
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}>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "
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}>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off">>;
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@@ -263,14 +263,14 @@ export declare namespace StructureRepresentationRegistry {
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alpha: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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quality: import("../../mol-util/param-definition").ParamDefinition.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
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smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "
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smoothColors: import("../../mol-util/param-definition").ParamDefinition.Mapped<import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "auto"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<{
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}>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "
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}>, "on"> | import("../../mol-util/param-definition").ParamDefinition.NamedParams<import("../../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off">>;
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@@ -281,7 +281,7 @@ export declare namespace StructureRepresentationRegistry {
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"orientation-ellipsoid-mesh">;
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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detail: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -295,7 +295,7 @@ export declare namespace StructureRepresentationRegistry {
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pointSizeAttenuation: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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pointStyle: import("../../mol-util/param-definition").ParamDefinition.Select<"square" | "circle" | "fuzzy">;
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@@ -306,7 +306,7 @@ export declare namespace StructureRepresentationRegistry {
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sizeFactor: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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visuals: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"polymer-gap" | "polymer-tube">;
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radialSegments: import("../../mol-util/param-definition").ParamDefinition.Numeric;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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doubleSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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flipSided: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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@@ -324,7 +324,7 @@ export declare namespace StructureRepresentationRegistry {
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ignoreHydrogens: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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traceOnly: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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tryUseImpostor: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
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unitKinds: import("../../mol-util/param-definition").ParamDefinition.MultiSelect<"
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ignoreLight: import("../../mol-util/param-definition").ParamDefinition.BooleanParam;
|
|
@@ -29,7 +29,7 @@ var StructureRepresentationRegistry = /** @class */ (function (_super) {
|
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var _this = _super.call(this) || this;
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(0, object_1.objectForEach)(StructureRepresentationRegistry.BuiltIn, function (p, k) {
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if (p.name !== k)
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throw new Error("Fix BuiltInStructureRepresentations to have matching names. "
|
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+
throw new Error("Fix BuiltInStructureRepresentations to have matching names. ".concat(p.name, " ").concat(k));
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|
_this.add(p);
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});
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|
return _this;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"registry.js","sourceRoot":"","sources":["../../../../src/mol-repr/structure/registry.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAGH,gDAAsD;AACtD,oDAAmF;AAEnF,kEAAqF;AACrF,8DAAmF;AACnF,oDAAyE;AACzE,wDAA6E;AAC7E,sEAA0F;AAC1F,gDAAqE;AACrE,wEAA4F;AAC5F,4DAAiF;AACjF,gDAAqE;AACrE,gDAAqE;AACrE,wDAA6E;AAC7E,8CAAmE;AACnE,oEAAwF;AACxF,sDAA2E;AAE3E;IAAqD,gEAA+D;IAChH;QAAA,YACI,iBAAO,SAKV;QAJG,IAAA,sBAAa,EAAC,+BAA+B,CAAC,OAAO,EAAE,UAAC,CAAC,EAAE,CAAC;YACxD,IAAI,CAAC,CAAC,IAAI,KAAK,CAAC;gBAAE,MAAM,IAAI,KAAK,CAAC,
|
|
1
|
+
{"version":3,"file":"registry.js","sourceRoot":"","sources":["../../../../src/mol-repr/structure/registry.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAGH,gDAAsD;AACtD,oDAAmF;AAEnF,kEAAqF;AACrF,8DAAmF;AACnF,oDAAyE;AACzE,wDAA6E;AAC7E,sEAA0F;AAC1F,gDAAqE;AACrE,wEAA4F;AAC5F,4DAAiF;AACjF,gDAAqE;AACrE,gDAAqE;AACrE,wDAA6E;AAC7E,8CAAmE;AACnE,oEAAwF;AACxF,sDAA2E;AAE3E;IAAqD,gEAA+D;IAChH;QAAA,YACI,iBAAO,SAKV;QAJG,IAAA,sBAAa,EAAC,+BAA+B,CAAC,OAAO,EAAE,UAAC,CAAC,EAAE,CAAC;YACxD,IAAI,CAAC,CAAC,IAAI,KAAK,CAAC;gBAAE,MAAM,IAAI,KAAK,CAAC,sEAA+D,CAAC,CAAC,IAAI,cAAI,CAAC,CAAE,CAAC,CAAC;YAChH,KAAI,CAAC,GAAG,CAAC,CAAQ,CAAC,CAAC;QACvB,CAAC,CAAC,CAAC;;IACP,CAAC;IACL,sCAAC;AAAD,CAAC,AARD,CAAqD,uCAAsB,GAQ1E;AARY,0EAA+B;AAU5C,WAAiB,+BAA+B;IAC/B,uCAAO,GAAG;QACnB,SAAS,EAAE,uCAA6B;QACxC,UAAU,EAAE,yCAA8B;QAC1C,gBAAgB,EAAE,mDAAkC;QACpD,cAAc,EAAE,iDAAkC;QAClD,WAAW,EAAE,2CAA+B;QAC5C,kBAAkB,EAAE,wDAAqC;QACzD,iBAAiB,EAAE,sDAAoC;QACvD,OAAO,EAAE,mCAA2B;QACpC,MAAM,EAAE,iCAA0B;QAClC,mBAAmB,EAAE,0DAAsC;QAC3D,aAAa,EAAE,+CAAiC;QAChD,OAAO,EAAE,mCAA2B;QACpC,OAAO,EAAE,mCAA2B;QACpC,WAAW,EAAE,2CAA+B;KAC/C,CAAC;AAKN,CAAC,EArBgB,+BAA+B,GAA/B,uCAA+B,KAA/B,uCAA+B,QAqB/C;AA/BY,0EAA+B"}
|
|
@@ -13,7 +13,7 @@ export declare const BackboneParams: {
|
|
|
13
13
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
|
|
14
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|
sizeFactor: PD.Numeric;
|
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15
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|
|
16
|
-
unitKinds: PD.MultiSelect<"
|
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16
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
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18
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|
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19
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flipSided: PD.BooleanParam;
|
|
@@ -31,7 +31,7 @@ export declare function getBackboneParams(ctx: ThemeRegistryContext, structure:
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31
31
|
visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
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|
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unitKinds: PD.MultiSelect<"
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|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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36
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|
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|
@@ -50,7 +50,7 @@ export declare const BackboneRepresentationProvider: StructureRepresentationProv
|
|
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50
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visuals: PD.MultiSelect<"polymer-gap" | "polymer-backbone-cylinder" | "polymer-backbone-sphere">;
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53
|
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unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
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54
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|
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55
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|
doubleSided: PD.BooleanParam;
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|
56
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|
flipSided: PD.BooleanParam;
|
|
@@ -10,7 +10,7 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
|
|
|
10
10
|
import { Structure } from '../../../mol-model/structure';
|
|
11
11
|
export declare const BallAndStickParams: {
|
|
12
12
|
includeParent: PD.BooleanParam;
|
|
13
|
-
unitKinds: PD.MultiSelect<"
|
|
13
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
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14
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|
sizeFactor: PD.Numeric;
|
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15
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|
sizeAspectRatio: PD.Numeric;
|
|
16
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|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -45,7 +45,7 @@ export declare const BallAndStickParams: {
|
|
|
45
45
|
export declare type BallAndStickParams = typeof BallAndStickParams;
|
|
46
46
|
export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structure: Structure): {
|
|
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|
includeParent: PD.BooleanParam;
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|
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unitKinds: PD.MultiSelect<"
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48
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
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|
sizeFactor: PD.Numeric;
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|
50
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sizeAspectRatio: PD.Numeric;
|
|
51
51
|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -81,7 +81,7 @@ export declare type BallAndStickRepresentation = StructureRepresentation<BallAnd
|
|
|
81
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|
export declare function BallAndStickRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, BallAndStickParams>): BallAndStickRepresentation;
|
|
82
82
|
export declare const BallAndStickRepresentationProvider: StructureRepresentationProvider<{
|
|
83
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|
84
|
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unitKinds: PD.MultiSelect<"
|
|
84
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
85
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|
sizeFactor: PD.Numeric;
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|
86
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|
sizeAspectRatio: PD.Numeric;
|
|
87
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|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
@@ -22,7 +22,7 @@ export declare const CarbohydrateParams: {
|
|
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22
22
|
dashCap: PD.BooleanParam;
|
|
23
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|
stubCap: PD.BooleanParam;
|
|
24
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|
radialSegments: PD.Numeric;
|
|
25
|
-
unitKinds: PD.MultiSelect<"
|
|
25
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
26
26
|
includeParent: PD.BooleanParam;
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|
27
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|
doubleSided: PD.BooleanParam;
|
|
28
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|
flipSided: PD.BooleanParam;
|
|
@@ -50,7 +50,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
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|
|
50
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|
dashCap: PD.BooleanParam;
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|
51
51
|
stubCap: PD.BooleanParam;
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|
52
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|
radialSegments: PD.Numeric;
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|
53
|
-
unitKinds: PD.MultiSelect<"
|
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53
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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|
54
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|
includeParent: PD.BooleanParam;
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|
55
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|
doubleSided: PD.BooleanParam;
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|
56
56
|
flipSided: PD.BooleanParam;
|
|
@@ -79,7 +79,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
|
|
|
79
79
|
dashCap: PD.BooleanParam;
|
|
80
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|
stubCap: PD.BooleanParam;
|
|
81
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|
radialSegments: PD.Numeric;
|
|
82
|
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unitKinds: PD.MultiSelect<"
|
|
82
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
83
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|
includeParent: PD.BooleanParam;
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84
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|
doubleSided: PD.BooleanParam;
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|
85
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|
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|
|
@@ -11,7 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../rep
|
|
|
11
11
|
export declare const CartoonParams: {
|
|
12
12
|
sizeFactor: PD.Numeric;
|
|
13
13
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
14
|
-
unitKinds: PD.MultiSelect<"
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|
14
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
15
15
|
includeParent: PD.BooleanParam;
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16
16
|
doubleSided: PD.BooleanParam;
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17
17
|
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|
|
@@ -25,14 +25,14 @@ export declare const CartoonParams: {
|
|
|
25
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|
aspectRatio: PD.Numeric;
|
|
26
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|
arrowFactor: PD.Numeric;
|
|
27
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|
tubularHelices: PD.BooleanParam;
|
|
28
|
-
helixProfile: PD.Select<"
|
|
28
|
+
helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
|
|
29
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linearSegments: PD.Numeric;
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};
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export declare type CartoonParams = typeof CartoonParams;
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export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: Structure): {
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sizeFactor: PD.Numeric;
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visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -46,7 +46,7 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
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aspectRatio: PD.Numeric;
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arrowFactor: PD.Numeric;
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tubularHelices: PD.BooleanParam;
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-
helixProfile: PD.Select<"
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+
helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
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linearSegments: PD.Numeric;
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};
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export declare type CartoonRepresentation = StructureRepresentation<CartoonParams>;
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@@ -54,7 +54,7 @@ export declare function CartoonRepresentation(ctx: RepresentationContext, getPar
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export declare const CartoonRepresentationProvider: StructureRepresentationProvider<{
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sizeFactor: PD.Numeric;
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visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -68,6 +68,6 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
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aspectRatio: PD.Numeric;
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arrowFactor: PD.Numeric;
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tubularHelices: PD.BooleanParam;
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-
helixProfile: PD.Select<"
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+
helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
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linearSegments: PD.Numeric;
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}, "cartoon">;
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@@ -11,7 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../../
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export declare const EllipsoidParams: {
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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@@ -45,7 +45,7 @@ export declare type EllipsoidParams = typeof EllipsoidParams;
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export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure: Structure): {
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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-
unitKinds: PD.MultiSelect<"
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48
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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|
@@ -80,7 +80,7 @@ export declare function EllipsoidRepresentation(ctx: RepresentationContext, getP
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80
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export declare const EllipsoidRepresentationProvider: StructureRepresentationProvider<{
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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|
83
|
-
unitKinds: PD.MultiSelect<"
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83
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
|
|
@@ -18,14 +18,14 @@ export declare const GaussianSurfaceParams: {
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18
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resolution: PD.Numeric;
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19
19
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radiusOffset: PD.Numeric;
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20
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smoothness: PD.Numeric;
|
|
21
|
-
unitKinds: PD.MultiSelect<"
|
|
21
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
22
22
|
alpha: PD.Numeric;
|
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23
23
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
24
24
|
tryUseGpu: PD.BooleanParam;
|
|
25
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
25
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
26
26
|
resolutionFactor: number;
|
|
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27
|
sampleStride: number;
|
|
28
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
28
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
|
|
29
29
|
doubleSided: PD.BooleanParam;
|
|
30
30
|
flipSided: PD.BooleanParam;
|
|
31
31
|
flatShaded: PD.BooleanParam;
|
|
@@ -43,14 +43,14 @@ export declare function getGaussianSurfaceParams(ctx: ThemeRegistryContext, stru
|
|
|
43
43
|
resolution: PD.Numeric;
|
|
44
44
|
radiusOffset: PD.Numeric;
|
|
45
45
|
smoothness: PD.Numeric;
|
|
46
|
-
unitKinds: PD.MultiSelect<"
|
|
46
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
47
47
|
alpha: PD.Numeric;
|
|
48
48
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
49
49
|
tryUseGpu: PD.BooleanParam;
|
|
50
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
50
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
51
51
|
resolutionFactor: number;
|
|
52
52
|
sampleStride: number;
|
|
53
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
53
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
|
|
54
54
|
doubleSided: PD.BooleanParam;
|
|
55
55
|
flipSided: PD.BooleanParam;
|
|
56
56
|
flatShaded: PD.BooleanParam;
|
|
@@ -69,14 +69,14 @@ export declare const GaussianSurfaceRepresentationProvider: StructureRepresentat
|
|
|
69
69
|
resolution: PD.Numeric;
|
|
70
70
|
radiusOffset: PD.Numeric;
|
|
71
71
|
smoothness: PD.Numeric;
|
|
72
|
-
unitKinds: PD.MultiSelect<"
|
|
72
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
73
73
|
alpha: PD.Numeric;
|
|
74
74
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
75
75
|
tryUseGpu: PD.BooleanParam;
|
|
76
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
76
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
77
77
|
resolutionFactor: number;
|
|
78
78
|
sampleStride: number;
|
|
79
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
79
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
|
|
80
80
|
doubleSided: PD.BooleanParam;
|
|
81
81
|
flipSided: PD.BooleanParam;
|
|
82
82
|
flatShaded: PD.BooleanParam;
|
|
@@ -16,7 +16,7 @@ export declare const GaussianVolumeParams: {
|
|
|
16
16
|
resolution: PD.Numeric;
|
|
17
17
|
radiusOffset: PD.Numeric;
|
|
18
18
|
smoothness: PD.Numeric;
|
|
19
|
-
unitKinds: PD.MultiSelect<"
|
|
19
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
20
20
|
doubleSided: PD.BooleanParam;
|
|
21
21
|
flipSided: PD.BooleanParam;
|
|
22
22
|
flatShaded: PD.BooleanParam;
|
|
@@ -52,7 +52,7 @@ export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, struc
|
|
|
52
52
|
resolution: PD.Numeric;
|
|
53
53
|
radiusOffset: PD.Numeric;
|
|
54
54
|
smoothness: PD.Numeric;
|
|
55
|
-
unitKinds: PD.MultiSelect<"
|
|
55
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
56
56
|
doubleSided: PD.BooleanParam;
|
|
57
57
|
flipSided: PD.BooleanParam;
|
|
58
58
|
flatShaded: PD.BooleanParam;
|
|
@@ -89,7 +89,7 @@ export declare const GaussianVolumeRepresentationProvider: StructureRepresentati
|
|
|
89
89
|
resolution: PD.Numeric;
|
|
90
90
|
radiusOffset: PD.Numeric;
|
|
91
91
|
smoothness: PD.Numeric;
|
|
92
|
-
unitKinds: PD.MultiSelect<"
|
|
92
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
93
93
|
doubleSided: PD.BooleanParam;
|
|
94
94
|
flipSided: PD.BooleanParam;
|
|
95
95
|
flatShaded: PD.BooleanParam;
|
|
@@ -18,7 +18,7 @@ export declare const LabelParams: {
|
|
|
18
18
|
chainScale: PD.Numeric;
|
|
19
19
|
residueScale: PD.Numeric;
|
|
20
20
|
elementScale: PD.Numeric;
|
|
21
|
-
unitKinds: PD.MultiSelect<"
|
|
21
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
22
22
|
includeParent: PD.BooleanParam;
|
|
23
23
|
sizeFactor: PD.Numeric;
|
|
24
24
|
borderWidth: PD.Numeric;
|
|
@@ -49,7 +49,7 @@ export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Str
|
|
|
49
49
|
chainScale: PD.Numeric;
|
|
50
50
|
residueScale: PD.Numeric;
|
|
51
51
|
elementScale: PD.Numeric;
|
|
52
|
-
unitKinds: PD.MultiSelect<"
|
|
52
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
53
53
|
includeParent: PD.BooleanParam;
|
|
54
54
|
sizeFactor: PD.Numeric;
|
|
55
55
|
borderWidth: PD.Numeric;
|
|
@@ -81,7 +81,7 @@ export declare const LabelRepresentationProvider: StructureRepresentationProvide
|
|
|
81
81
|
chainScale: PD.Numeric;
|
|
82
82
|
residueScale: PD.Numeric;
|
|
83
83
|
elementScale: PD.Numeric;
|
|
84
|
-
unitKinds: PD.MultiSelect<"
|
|
84
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
85
85
|
includeParent: PD.BooleanParam;
|
|
86
86
|
sizeFactor: PD.Numeric;
|
|
87
87
|
borderWidth: PD.Numeric;
|
|
@@ -12,7 +12,7 @@ export declare const LineParams: {
|
|
|
12
12
|
multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
|
|
13
13
|
includeParent: PD.BooleanParam;
|
|
14
14
|
sizeFactor: PD.Numeric;
|
|
15
|
-
unitKinds: PD.MultiSelect<"
|
|
15
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
16
16
|
visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
|
|
17
17
|
lineSizeAttenuation: PD.BooleanParam;
|
|
18
18
|
ignoreHydrogens: PD.BooleanParam;
|
|
@@ -36,7 +36,7 @@ export declare function getLineParams(ctx: ThemeRegistryContext, structure: Stru
|
|
|
36
36
|
multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
|
|
37
37
|
includeParent: PD.BooleanParam;
|
|
38
38
|
sizeFactor: PD.Numeric;
|
|
39
|
-
unitKinds: PD.MultiSelect<"
|
|
39
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
40
40
|
visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
|
|
41
41
|
lineSizeAttenuation: PD.BooleanParam;
|
|
42
42
|
ignoreHydrogens: PD.BooleanParam;
|
|
@@ -61,7 +61,7 @@ export declare const LineRepresentationProvider: StructureRepresentationProvider
|
|
|
61
61
|
multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
|
|
62
62
|
includeParent: PD.BooleanParam;
|
|
63
63
|
sizeFactor: PD.Numeric;
|
|
64
|
-
unitKinds: PD.MultiSelect<"
|
|
64
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
65
65
|
visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
|
|
66
66
|
lineSizeAttenuation: PD.BooleanParam;
|
|
67
67
|
ignoreHydrogens: PD.BooleanParam;
|
|
@@ -17,14 +17,14 @@ export declare const MolecularSurfaceParams: {
|
|
|
17
17
|
probeRadius: PD.Numeric;
|
|
18
18
|
resolution: PD.Numeric;
|
|
19
19
|
probePositions: PD.Numeric;
|
|
20
|
-
unitKinds: PD.MultiSelect<"
|
|
20
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
21
21
|
lineSizeAttenuation: PD.BooleanParam;
|
|
22
22
|
alpha: PD.Numeric;
|
|
23
23
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
24
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
24
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
25
25
|
resolutionFactor: number;
|
|
26
26
|
sampleStride: number;
|
|
27
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
27
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
|
|
28
28
|
doubleSided: PD.BooleanParam;
|
|
29
29
|
flipSided: PD.BooleanParam;
|
|
30
30
|
flatShaded: PD.BooleanParam;
|
|
@@ -41,14 +41,14 @@ export declare function getMolecularSurfaceParams(ctx: ThemeRegistryContext, str
|
|
|
41
41
|
probeRadius: PD.Numeric;
|
|
42
42
|
resolution: PD.Numeric;
|
|
43
43
|
probePositions: PD.Numeric;
|
|
44
|
-
unitKinds: PD.MultiSelect<"
|
|
44
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
45
45
|
lineSizeAttenuation: PD.BooleanParam;
|
|
46
46
|
alpha: PD.Numeric;
|
|
47
47
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
48
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
48
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
49
49
|
resolutionFactor: number;
|
|
50
50
|
sampleStride: number;
|
|
51
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
51
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
|
|
52
52
|
doubleSided: PD.BooleanParam;
|
|
53
53
|
flipSided: PD.BooleanParam;
|
|
54
54
|
flatShaded: PD.BooleanParam;
|
|
@@ -66,14 +66,14 @@ export declare const MolecularSurfaceRepresentationProvider: StructureRepresenta
|
|
|
66
66
|
probeRadius: PD.Numeric;
|
|
67
67
|
resolution: PD.Numeric;
|
|
68
68
|
probePositions: PD.Numeric;
|
|
69
|
-
unitKinds: PD.MultiSelect<"
|
|
69
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
70
70
|
lineSizeAttenuation: PD.BooleanParam;
|
|
71
71
|
alpha: PD.Numeric;
|
|
72
72
|
quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
|
|
73
|
-
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "
|
|
73
|
+
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
74
74
|
resolutionFactor: number;
|
|
75
75
|
sampleStride: number;
|
|
76
|
-
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "
|
|
76
|
+
}>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
|
|
77
77
|
doubleSided: PD.BooleanParam;
|
|
78
78
|
flipSided: PD.BooleanParam;
|
|
79
79
|
flatShaded: PD.BooleanParam;
|