molstar 2.3.6 → 2.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1610) hide show
  1. package/build/viewer/molstar.css +1 -2
  2. package/build/viewer/molstar.js +1 -1
  3. package/lib/apps/docking-viewer/index.js +1 -1
  4. package/lib/apps/docking-viewer/index.js.map +1 -1
  5. package/lib/apps/viewer/index.d.ts +1 -1
  6. package/lib/apps/viewer/index.js +3 -3
  7. package/lib/apps/viewer/index.js.map +1 -1
  8. package/lib/cli/chem-comp-dict/create-ions.js +1 -1
  9. package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
  10. package/lib/cli/chem-comp-dict/create-table.js +3 -3
  11. package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
  12. package/lib/cli/chem-comp-dict/util.js +2 -2
  13. package/lib/cli/chem-comp-dict/util.js.map +1 -1
  14. package/lib/cli/cif2bcif/converter.js +2 -2
  15. package/lib/cli/cif2bcif/converter.js.map +1 -1
  16. package/lib/cli/cifschema/index.js +12 -12
  17. package/lib/cli/cifschema/index.js.map +1 -1
  18. package/lib/cli/cifschema/util/cif-dic.js +20 -19
  19. package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
  20. package/lib/cli/cifschema/util/generate.js +21 -21
  21. package/lib/cli/cifschema/util/generate.js.map +1 -1
  22. package/lib/cli/cifschema/util/schema.js +1 -1
  23. package/lib/cli/cifschema/util/schema.js.map +1 -1
  24. package/lib/cli/lipid-params/index.js +3 -3
  25. package/lib/cli/lipid-params/index.js.map +1 -1
  26. package/lib/cli/state-docs/index.js +4 -4
  27. package/lib/cli/state-docs/index.js.map +1 -1
  28. package/lib/cli/state-docs/pd-to-md.js +10 -10
  29. package/lib/cli/state-docs/pd-to-md.js.map +1 -1
  30. package/lib/cli/structure-info/model.js +18 -18
  31. package/lib/cli/structure-info/model.js.map +1 -1
  32. package/lib/cli/structure-info/volume.js +1 -1
  33. package/lib/cli/structure-info/volume.js.map +1 -1
  34. package/lib/commonjs/apps/docking-viewer/index.js +1 -1
  35. package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
  36. package/lib/commonjs/apps/viewer/index.d.ts +8 -8
  37. package/lib/commonjs/apps/viewer/index.js +3 -3
  38. package/lib/commonjs/apps/viewer/index.js.map +1 -1
  39. package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
  40. package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
  41. package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
  42. package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
  43. package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
  44. package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
  45. package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
  46. package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
  47. package/lib/commonjs/cli/cifschema/index.js +12 -12
  48. package/lib/commonjs/cli/cifschema/index.js.map +1 -1
  49. package/lib/commonjs/cli/cifschema/util/cif-dic.js +20 -19
  50. package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
  51. package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
  52. package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
  53. package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
  54. package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
  55. package/lib/commonjs/cli/lipid-params/index.js +3 -3
  56. package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
  57. package/lib/commonjs/cli/state-docs/index.js +4 -4
  58. package/lib/commonjs/cli/state-docs/index.js.map +1 -1
  59. package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
  60. package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
  61. package/lib/commonjs/cli/structure-info/model.js +18 -18
  62. package/lib/commonjs/cli/structure-info/model.js.map +1 -1
  63. package/lib/commonjs/cli/structure-info/volume.js +1 -1
  64. package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
  65. package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
  66. package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
  67. package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
  68. package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
  69. package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
  70. package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
  71. package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
  72. package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
  73. package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
  74. package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
  75. package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
  76. package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
  77. package/lib/commonjs/examples/task.js +6 -6
  78. package/lib/commonjs/examples/task.js.map +1 -1
  79. package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +1 -1
  80. package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
  81. package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
  82. package/lib/commonjs/extensions/anvil/representation.js +1 -1
  83. package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
  84. package/lib/commonjs/extensions/cellpack/model.js +15 -15
  85. package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
  86. package/lib/commonjs/extensions/cellpack/state.js +5 -5
  87. package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
  88. package/lib/commonjs/extensions/cellpack/util.js +4 -4
  89. package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
  90. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
  91. package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
  92. package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
  93. package/lib/commonjs/extensions/g3d/data.js +2 -2
  94. package/lib/commonjs/extensions/g3d/data.js.map +1 -1
  95. package/lib/commonjs/extensions/g3d/model.js +2 -2
  96. package/lib/commonjs/extensions/g3d/model.js.map +1 -1
  97. package/lib/commonjs/extensions/geo-export/controls.js +3 -3
  98. package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
  99. package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +1 -0
  100. package/lib/commonjs/extensions/geo-export/glb-exporter.js +28 -18
  101. package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
  102. package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +31 -2
  103. package/lib/commonjs/extensions/geo-export/mesh-exporter.js +87 -15
  104. package/lib/commonjs/extensions/geo-export/mesh-exporter.js.map +1 -1
  105. package/lib/commonjs/extensions/geo-export/obj-exporter.d.ts +1 -0
  106. package/lib/commonjs/extensions/geo-export/obj-exporter.js +27 -18
  107. package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
  108. package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
  109. package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
  110. package/lib/commonjs/extensions/geo-export/ui.js +24 -20
  111. package/lib/commonjs/extensions/geo-export/ui.js.map +1 -1
  112. package/lib/commonjs/extensions/geo-export/usdz-exporter.d.ts +1 -0
  113. package/lib/commonjs/extensions/geo-export/usdz-exporter.js +31 -21
  114. package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
  115. package/lib/commonjs/extensions/mp4-export/controls.js +2 -2
  116. package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
  117. package/lib/commonjs/extensions/mp4-export/ui.js +7 -6
  118. package/lib/commonjs/extensions/mp4-export/ui.js.map +1 -1
  119. package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
  120. package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
  121. package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
  122. package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
  123. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
  124. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
  125. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
  126. package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
  127. package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
  128. package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
  129. package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
  130. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
  131. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
  132. package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +22 -21
  133. package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
  134. package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
  135. package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
  136. package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
  137. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -5
  138. package/lib/commonjs/extensions/rcsb/validation-report/representation.js +2 -2
  139. package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
  140. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
  141. package/lib/commonjs/mol-canvas3d/canvas3d.js +3 -3
  142. package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
  143. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +2 -2
  144. package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
  145. package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
  146. package/lib/commonjs/mol-canvas3d/passes/draw.js +3 -11
  147. package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
  148. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
  149. package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
  150. package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
  151. package/lib/commonjs/mol-canvas3d/util.js +1 -1
  152. package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
  153. package/lib/commonjs/mol-data/db/table.js +1 -1
  154. package/lib/commonjs/mol-data/db/table.js.map +1 -1
  155. package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
  156. package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
  157. package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
  158. package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
  159. package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
  160. package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
  161. package/lib/commonjs/mol-data/int/tuple.js +1 -1
  162. package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
  163. package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
  164. package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
  165. package/lib/commonjs/mol-geo/geometry/base.d.ts +13 -1
  166. package/lib/commonjs/mol-geo/geometry/base.js +37 -2
  167. package/lib/commonjs/mol-geo/geometry/base.js.map +1 -1
  168. package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -2
  169. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +9 -2
  170. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +154 -35
  171. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
  172. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
  173. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
  174. package/lib/commonjs/mol-geo/geometry/overpaint-data.d.ts +7 -2
  175. package/lib/commonjs/mol-geo/geometry/overpaint-data.js +10 -1
  176. package/lib/commonjs/mol-geo/geometry/overpaint-data.js.map +1 -1
  177. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +0 -1
  178. package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
  179. package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
  180. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +7 -3
  181. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +162 -27
  182. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
  183. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
  184. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -1
  185. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
  186. package/lib/commonjs/mol-geo/geometry/transparency-data.d.ts +7 -2
  187. package/lib/commonjs/mol-geo/geometry/transparency-data.js +10 -1
  188. package/lib/commonjs/mol-geo/geometry/transparency-data.js.map +1 -1
  189. package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
  190. package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
  191. package/lib/commonjs/mol-gl/_spec/gl.shim.js +4 -4
  192. package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
  193. package/lib/commonjs/mol-gl/_spec/renderer.spec.js +1 -1
  194. package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
  195. package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
  196. package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
  197. package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
  198. package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
  199. package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -3
  200. package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js.map +1 -1
  201. package/lib/commonjs/mol-gl/compute/util.d.ts +25 -6
  202. package/lib/commonjs/mol-gl/compute/util.js +76 -21
  203. package/lib/commonjs/mol-gl/compute/util.js.map +1 -1
  204. package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +8 -0
  205. package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +8 -0
  206. package/lib/commonjs/mol-gl/renderable/image.d.ts +8 -0
  207. package/lib/commonjs/mol-gl/renderable/lines.d.ts +8 -0
  208. package/lib/commonjs/mol-gl/renderable/mesh.d.ts +8 -0
  209. package/lib/commonjs/mol-gl/renderable/points.d.ts +8 -0
  210. package/lib/commonjs/mol-gl/renderable/schema.d.ts +16 -0
  211. package/lib/commonjs/mol-gl/renderable/schema.js +8 -0
  212. package/lib/commonjs/mol-gl/renderable/schema.js.map +1 -1
  213. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +8 -0
  214. package/lib/commonjs/mol-gl/renderable/text.d.ts +8 -0
  215. package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +22 -13
  216. package/lib/commonjs/mol-gl/renderable/texture-mesh.js +1 -1
  217. package/lib/commonjs/mol-gl/renderable/texture-mesh.js.map +1 -1
  218. package/lib/commonjs/mol-gl/renderable/util.js +1 -1
  219. package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
  220. package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
  221. package/lib/commonjs/mol-gl/renderer.js +3 -0
  222. package/lib/commonjs/mol-gl/renderer.js.map +1 -1
  223. package/lib/commonjs/mol-gl/scene.js +1 -1
  224. package/lib/commonjs/mol-gl/scene.js.map +1 -1
  225. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  226. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
  227. package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
  228. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  229. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  230. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
  231. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  232. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  233. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
  234. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.d.ts +1 -1
  235. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +1 -1
  236. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js.map +1 -1
  237. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
  238. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
  239. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js.map +1 -1
  240. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.d.ts +1 -1
  241. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js +1 -1
  242. package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js.map +1 -1
  243. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  244. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  245. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js.map +1 -1
  246. package/lib/commonjs/mol-gl/shader/mesh.vert.d.ts +1 -1
  247. package/lib/commonjs/mol-gl/shader/mesh.vert.js +1 -1
  248. package/lib/commonjs/mol-gl/shader/mesh.vert.js.map +1 -1
  249. package/lib/commonjs/mol-gl/shader-code.js +8 -8
  250. package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
  251. package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
  252. package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
  253. package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
  254. package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
  255. package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
  256. package/lib/commonjs/mol-gl/webgl/context.js +2 -2
  257. package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
  258. package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
  259. package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
  260. package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
  261. package/lib/commonjs/mol-gl/webgl/program.js +14 -12
  262. package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
  263. package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
  264. package/lib/commonjs/mol-gl/webgl/render-item.js +2 -2
  265. package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
  266. package/lib/commonjs/mol-gl/webgl/resources.js +2 -2
  267. package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
  268. package/lib/commonjs/mol-gl/webgl/shader.js +3 -3
  269. package/lib/commonjs/mol-gl/webgl/shader.js.map +1 -1
  270. package/lib/commonjs/mol-gl/webgl/state.d.ts +4 -1
  271. package/lib/commonjs/mol-gl/webgl/state.js +25 -1
  272. package/lib/commonjs/mol-gl/webgl/state.js.map +1 -1
  273. package/lib/commonjs/mol-gl/webgl/texture.js +2 -2
  274. package/lib/commonjs/mol-gl/webgl/texture.js.map +1 -1
  275. package/lib/commonjs/mol-gl/webgl/uniform.js +2 -2
  276. package/lib/commonjs/mol-gl/webgl/uniform.js.map +1 -1
  277. package/lib/commonjs/mol-gl/webgl/vertex-array.d.ts +3 -2
  278. package/lib/commonjs/mol-gl/webgl/vertex-array.js +9 -2
  279. package/lib/commonjs/mol-gl/webgl/vertex-array.js.map +1 -1
  280. package/lib/commonjs/mol-io/common/file-handle.js +1 -1
  281. package/lib/commonjs/mol-io/common/file-handle.js.map +1 -1
  282. package/lib/commonjs/mol-io/common/typed-array.d.ts +1 -1
  283. package/lib/commonjs/mol-io/common/typed-array.js +1 -1
  284. package/lib/commonjs/mol-io/common/typed-array.js.map +1 -1
  285. package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js +51 -0
  286. package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js.map +1 -1
  287. package/lib/commonjs/mol-io/reader/ccp4/parser.js +1 -1
  288. package/lib/commonjs/mol-io/reader/ccp4/parser.js.map +1 -1
  289. package/lib/commonjs/mol-io/reader/cif/binary/parser.js +1 -1
  290. package/lib/commonjs/mol-io/reader/cif/binary/parser.js.map +1 -1
  291. package/lib/commonjs/mol-io/reader/cif/data-model.js +7 -7
  292. package/lib/commonjs/mol-io/reader/cif/data-model.js.map +1 -1
  293. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +2 -2
  294. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
  295. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  296. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
  297. package/lib/commonjs/mol-io/reader/cif/schema/cif-core.d.ts +8 -5
  298. package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js +15 -5
  299. package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js.map +1 -1
  300. package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
  301. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +4 -4
  302. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
  303. package/lib/commonjs/mol-io/reader/cif/schema.js +7 -7
  304. package/lib/commonjs/mol-io/reader/cif/schema.js.map +1 -1
  305. package/lib/commonjs/mol-io/reader/cif/text/parser.js +2 -2
  306. package/lib/commonjs/mol-io/reader/cif/text/parser.js.map +1 -1
  307. package/lib/commonjs/mol-io/reader/dcd/parser.js +2 -2
  308. package/lib/commonjs/mol-io/reader/dcd/parser.js.map +1 -1
  309. package/lib/commonjs/mol-io/reader/ply/schema.d.ts +1 -1
  310. package/lib/commonjs/mol-io/reader/ply/schema.js +1 -1
  311. package/lib/commonjs/mol-io/reader/ply/schema.js.map +1 -1
  312. package/lib/commonjs/mol-io/reader/result.js +1 -1
  313. package/lib/commonjs/mol-io/reader/result.js.map +1 -1
  314. package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.d.ts +9 -0
  315. package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.js +91 -0
  316. package/lib/commonjs/mol-io/reader/sdf/parser-v3-util.js.map +1 -0
  317. package/lib/commonjs/mol-io/reader/sdf/parser.d.ts +1 -1
  318. package/lib/commonjs/mol-io/reader/sdf/parser.js +12 -4
  319. package/lib/commonjs/mol-io/reader/sdf/parser.js.map +1 -1
  320. package/lib/commonjs/mol-io/writer/cif/encoder/text.js +3 -3
  321. package/lib/commonjs/mol-io/writer/cif/encoder/text.js.map +1 -1
  322. package/lib/commonjs/mol-io/writer/cif/encoder.js +5 -5
  323. package/lib/commonjs/mol-io/writer/cif/encoder.js.map +1 -1
  324. package/lib/commonjs/mol-io/writer/mol/encoder.js +4 -4
  325. package/lib/commonjs/mol-io/writer/mol/encoder.js.map +1 -1
  326. package/lib/commonjs/mol-io/writer/mol2/encoder.js +6 -6
  327. package/lib/commonjs/mol-io/writer/mol2/encoder.js.map +1 -1
  328. package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js +1 -1
  329. package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js.map +1 -1
  330. package/lib/commonjs/mol-math/geometry/spacegroup/construction.js +8 -8
  331. package/lib/commonjs/mol-math/geometry/spacegroup/construction.js.map +1 -1
  332. package/lib/commonjs/mol-math/geometry/spacegroup/tables.js +1 -1
  333. package/lib/commonjs/mol-math/geometry/spacegroup/tables.js.map +1 -1
  334. package/lib/commonjs/mol-math/geometry/symmetry-operator.js +4 -4
  335. package/lib/commonjs/mol-math/geometry/symmetry-operator.js.map +1 -1
  336. package/lib/commonjs/mol-math/graph/inter-unit-graph.js +2 -2
  337. package/lib/commonjs/mol-math/graph/inter-unit-graph.js.map +1 -1
  338. package/lib/commonjs/mol-math/linear-algebra/3d/quat.js +1 -1
  339. package/lib/commonjs/mol-math/linear-algebra/3d/quat.js.map +1 -1
  340. package/lib/commonjs/mol-math/linear-algebra/3d/vec2.js +1 -1
  341. package/lib/commonjs/mol-math/linear-algebra/3d/vec2.js.map +1 -1
  342. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js +1 -1
  343. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js.map +1 -1
  344. package/lib/commonjs/mol-math/linear-algebra/3d/vec4.js +1 -1
  345. package/lib/commonjs/mol-math/linear-algebra/3d/vec4.js.map +1 -1
  346. package/lib/commonjs/mol-model/loci.d.ts +2 -2
  347. package/lib/commonjs/mol-model/sequence/sequence.js +2 -2
  348. package/lib/commonjs/mol-model/sequence/sequence.js.map +1 -1
  349. package/lib/commonjs/mol-model/shape/shape.d.ts +1 -1
  350. package/lib/commonjs/mol-model/structure/export/categories/atom_site.js +2 -2
  351. package/lib/commonjs/mol-model/structure/export/categories/atom_site.js.map +1 -1
  352. package/lib/commonjs/mol-model/structure/export/categories/atom_site_operator_mapping.js +1 -1
  353. package/lib/commonjs/mol-model/structure/export/categories/atom_site_operator_mapping.js.map +1 -1
  354. package/lib/commonjs/mol-model/structure/export/categories/secondary-structure.js +1 -1
  355. package/lib/commonjs/mol-model/structure/export/categories/secondary-structure.js.map +1 -1
  356. package/lib/commonjs/mol-model/structure/export/mmcif.js +1 -1
  357. package/lib/commonjs/mol-model/structure/export/mmcif.js.map +1 -1
  358. package/lib/commonjs/mol-model/structure/model/properties/atomic/bonds.js +2 -2
  359. package/lib/commonjs/mol-model/structure/model/properties/atomic/bonds.js.map +1 -1
  360. package/lib/commonjs/mol-model/structure/model/properties/symmetry.js +3 -3
  361. package/lib/commonjs/mol-model/structure/model/properties/symmetry.js.map +1 -1
  362. package/lib/commonjs/mol-model/structure/model/properties/utils/atomic-index.js +2 -2
  363. package/lib/commonjs/mol-model/structure/model/properties/utils/atomic-index.js.map +1 -1
  364. package/lib/commonjs/mol-model/structure/model/properties/utils/coarse-keys.js +1 -1
  365. package/lib/commonjs/mol-model/structure/model/properties/utils/coarse-keys.js.map +1 -1
  366. package/lib/commonjs/mol-model/structure/model/properties/utils/residue-set.js +1 -1
  367. package/lib/commonjs/mol-model/structure/model/properties/utils/residue-set.js.map +1 -1
  368. package/lib/commonjs/mol-model/structure/query/context.js +1 -1
  369. package/lib/commonjs/mol-model/structure/query/context.js.map +1 -1
  370. package/lib/commonjs/mol-model/structure/query/utils/structure-distance.d.ts +5 -54
  371. package/lib/commonjs/mol-model/structure/structure/carbohydrates/compute.js +1 -1
  372. package/lib/commonjs/mol-model/structure/structure/carbohydrates/compute.js.map +1 -1
  373. package/lib/commonjs/mol-model/structure/structure/element/loci.js +2 -2
  374. package/lib/commonjs/mol-model/structure/structure/element/loci.js.map +1 -1
  375. package/lib/commonjs/mol-model/structure/structure/element/util.js +1 -1
  376. package/lib/commonjs/mol-model/structure/structure/element/util.js.map +1 -1
  377. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +1 -1
  378. package/lib/commonjs/mol-model/structure/structure/properties.js +6 -6
  379. package/lib/commonjs/mol-model/structure/structure/properties.js.map +1 -1
  380. package/lib/commonjs/mol-model/structure/structure/structure.js +1 -1
  381. package/lib/commonjs/mol-model/structure/structure/structure.js.map +1 -1
  382. package/lib/commonjs/mol-model/structure/structure/symmetry.js +3 -3
  383. package/lib/commonjs/mol-model/structure/structure/symmetry.js.map +1 -1
  384. package/lib/commonjs/mol-model/structure/structure/unit.d.ts +2 -2
  385. package/lib/commonjs/mol-model/structure/structure/util/superposition-db-mapping.js +1 -1
  386. package/lib/commonjs/mol-model/structure/structure/util/superposition-db-mapping.js.map +1 -1
  387. package/lib/commonjs/mol-model/volume/volume.js +2 -2
  388. package/lib/commonjs/mol-model/volume/volume.js.map +1 -1
  389. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +4 -4
  390. package/lib/commonjs/mol-model-formats/shape/ply.js +1 -1
  391. package/lib/commonjs/mol-model-formats/shape/ply.js.map +1 -1
  392. package/lib/commonjs/mol-model-formats/structure/basic/atomic.js +2 -2
  393. package/lib/commonjs/mol-model-formats/structure/basic/atomic.js.map +1 -1
  394. package/lib/commonjs/mol-model-formats/structure/basic/properties.js +2 -2
  395. package/lib/commonjs/mol-model-formats/structure/basic/properties.js.map +1 -1
  396. package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +1 -1
  397. package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +2 -2
  398. package/lib/commonjs/mol-model-formats/structure/common/entity.js +6 -6
  399. package/lib/commonjs/mol-model-formats/structure/common/entity.js.map +1 -1
  400. package/lib/commonjs/mol-model-formats/structure/pdb/assembly.js +10 -10
  401. package/lib/commonjs/mol-model-formats/structure/pdb/assembly.js.map +1 -1
  402. package/lib/commonjs/mol-model-formats/structure/pdb/conect.js +1 -1
  403. package/lib/commonjs/mol-model-formats/structure/pdb/conect.js.map +1 -1
  404. package/lib/commonjs/mol-model-formats/structure/pdb/entity.js +1 -1
  405. package/lib/commonjs/mol-model-formats/structure/pdb/entity.js.map +1 -1
  406. package/lib/commonjs/mol-model-formats/structure/property/assembly.js +1 -1
  407. package/lib/commonjs/mol-model-formats/structure/property/assembly.js.map +1 -1
  408. package/lib/commonjs/mol-model-formats/structure/property/symmetry.js +1 -1
  409. package/lib/commonjs/mol-model-formats/structure/property/symmetry.js.map +1 -1
  410. package/lib/commonjs/mol-model-formats/volume/ccp4.js +1 -1
  411. package/lib/commonjs/mol-model-formats/volume/ccp4.js.map +1 -1
  412. package/lib/commonjs/mol-model-props/common/custom-element-property.js +1 -1
  413. package/lib/commonjs/mol-model-props/common/custom-element-property.js.map +1 -1
  414. package/lib/commonjs/mol-model-props/common/custom-property.js +1 -1
  415. package/lib/commonjs/mol-model-props/common/custom-property.js.map +1 -1
  416. package/lib/commonjs/mol-model-props/computed/interactions/common.js +1 -1
  417. package/lib/commonjs/mol-model-props/computed/interactions/common.js.map +1 -1
  418. package/lib/commonjs/mol-model-props/computed/interactions/refine.js +2 -2
  419. package/lib/commonjs/mol-model-props/computed/interactions/refine.js.map +1 -1
  420. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -1
  421. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -1
  422. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -3
  423. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/property.js +1 -1
  424. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/property.js.map +1 -1
  425. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -4
  426. package/lib/commonjs/mol-model-props/integrative/pair-restraints.js +1 -1
  427. package/lib/commonjs/mol-model-props/integrative/pair-restraints.js.map +1 -1
  428. package/lib/commonjs/mol-model-props/sequence/best-database-mapping.js +1 -1
  429. package/lib/commonjs/mol-model-props/sequence/best-database-mapping.js.map +1 -1
  430. package/lib/commonjs/mol-model-props/sequence/themes/best-database-mapping.js +1 -1
  431. package/lib/commonjs/mol-model-props/sequence/themes/best-database-mapping.js.map +1 -1
  432. package/lib/commonjs/mol-plugin/behavior/behavior.d.ts +1 -1
  433. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js +3 -3
  434. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js.map +1 -1
  435. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/interactions.js +3 -3
  436. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/interactions.js.map +1 -1
  437. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js +1 -1
  438. package/lib/commonjs/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js.map +1 -1
  439. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
  440. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +1 -1
  441. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js.map +1 -1
  442. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.js +6 -6
  443. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.js.map +1 -1
  444. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +2 -2
  445. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.js +5 -5
  446. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.js.map +1 -1
  447. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/util.js +6 -6
  448. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/util.js.map +1 -1
  449. package/lib/commonjs/mol-plugin/behavior/static/state.js +4 -4
  450. package/lib/commonjs/mol-plugin/behavior/static/state.js.map +1 -1
  451. package/lib/commonjs/mol-plugin/commands.d.ts +2 -2
  452. package/lib/commonjs/mol-plugin/config.d.ts +1 -1
  453. package/lib/commonjs/mol-plugin/context.js +2 -3
  454. package/lib/commonjs/mol-plugin/context.js.map +1 -1
  455. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +6 -6
  456. package/lib/commonjs/mol-plugin/util/viewport-screenshot.js +1 -1
  457. package/lib/commonjs/mol-plugin/util/viewport-screenshot.js.map +1 -1
  458. package/lib/commonjs/mol-plugin-state/actions/file.js +7 -5
  459. package/lib/commonjs/mol-plugin-state/actions/file.js.map +1 -1
  460. package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +1 -1
  461. package/lib/commonjs/mol-plugin-state/actions/structure.js +12 -12
  462. package/lib/commonjs/mol-plugin-state/actions/structure.js.map +1 -1
  463. package/lib/commonjs/mol-plugin-state/actions/volume.js +16 -16
  464. package/lib/commonjs/mol-plugin-state/actions/volume.js.map +1 -1
  465. package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts +4 -4
  466. package/lib/commonjs/mol-plugin-state/animation/helpers.d.ts +5 -5
  467. package/lib/commonjs/mol-plugin-state/builder/data.d.ts +3 -3
  468. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +12 -12
  469. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +4 -4
  470. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.js +2 -2
  471. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.js.map +1 -1
  472. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +4 -4
  473. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js +1 -1
  474. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js.map +1 -1
  475. package/lib/commonjs/mol-plugin-state/builder/structure/representation.js +2 -2
  476. package/lib/commonjs/mol-plugin-state/builder/structure/representation.js.map +1 -1
  477. package/lib/commonjs/mol-plugin-state/builder/structure.js +3 -3
  478. package/lib/commonjs/mol-plugin-state/builder/structure.js.map +1 -1
  479. package/lib/commonjs/mol-plugin-state/formats/registry.js +1 -1
  480. package/lib/commonjs/mol-plugin-state/formats/registry.js.map +1 -1
  481. package/lib/commonjs/mol-plugin-state/formats/shape.d.ts +2 -2
  482. package/lib/commonjs/mol-plugin-state/formats/structure.d.ts +6 -6
  483. package/lib/commonjs/mol-plugin-state/formats/volume.d.ts +14 -14
  484. package/lib/commonjs/mol-plugin-state/formats/volume.js +1 -0
  485. package/lib/commonjs/mol-plugin-state/formats/volume.js.map +1 -1
  486. package/lib/commonjs/mol-plugin-state/helpers/root-structure.d.ts +2 -2
  487. package/lib/commonjs/mol-plugin-state/helpers/root-structure.js +10 -10
  488. package/lib/commonjs/mol-plugin-state/helpers/root-structure.js.map +1 -1
  489. package/lib/commonjs/mol-plugin-state/helpers/structure-component.d.ts +1 -1
  490. package/lib/commonjs/mol-plugin-state/helpers/structure-component.js +3 -3
  491. package/lib/commonjs/mol-plugin-state/helpers/structure-component.js.map +1 -1
  492. package/lib/commonjs/mol-plugin-state/helpers/structure-query.js +1 -1
  493. package/lib/commonjs/mol-plugin-state/helpers/structure-query.js.map +1 -1
  494. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  495. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.js +19 -8
  496. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.js.map +1 -1
  497. package/lib/commonjs/mol-plugin-state/manager/animation.js +1 -1
  498. package/lib/commonjs/mol-plugin-state/manager/animation.js.map +1 -1
  499. package/lib/commonjs/mol-plugin-state/manager/interactivity.d.ts +1 -1
  500. package/lib/commonjs/mol-plugin-state/manager/loci-label.js +1 -1
  501. package/lib/commonjs/mol-plugin-state/manager/loci-label.js.map +1 -1
  502. package/lib/commonjs/mol-plugin-state/manager/snapshots.js +3 -2
  503. package/lib/commonjs/mol-plugin-state/manager/snapshots.js.map +1 -1
  504. package/lib/commonjs/mol-plugin-state/manager/structure/hierarchy.js +2 -2
  505. package/lib/commonjs/mol-plugin-state/manager/structure/hierarchy.js.map +1 -1
  506. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.js +3 -3
  507. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.js.map +1 -1
  508. package/lib/commonjs/mol-plugin-state/transforms/data.d.ts +6 -6
  509. package/lib/commonjs/mol-plugin-state/transforms/data.js +8 -8
  510. package/lib/commonjs/mol-plugin-state/transforms/data.js.map +1 -1
  511. package/lib/commonjs/mol-plugin-state/transforms/model.d.ts +3 -3
  512. package/lib/commonjs/mol-plugin-state/transforms/model.js +18 -18
  513. package/lib/commonjs/mol-plugin-state/transforms/model.js.map +1 -1
  514. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +6 -6
  515. package/lib/commonjs/mol-plugin-state/transforms/representation.js +64 -38
  516. package/lib/commonjs/mol-plugin-state/transforms/representation.js.map +1 -1
  517. package/lib/commonjs/mol-plugin-state/transforms/volume.js +7 -7
  518. package/lib/commonjs/mol-plugin-state/transforms/volume.js.map +1 -1
  519. package/lib/commonjs/mol-plugin-ui/base.js +1 -1
  520. package/lib/commonjs/mol-plugin-ui/base.js.map +1 -1
  521. package/lib/commonjs/mol-plugin-ui/controls/action-menu.js +3 -3
  522. package/lib/commonjs/mol-plugin-ui/controls/action-menu.js.map +1 -1
  523. package/lib/commonjs/mol-plugin-ui/controls/color.js +2 -2
  524. package/lib/commonjs/mol-plugin-ui/controls/color.js.map +1 -1
  525. package/lib/commonjs/mol-plugin-ui/controls/common.js +9 -9
  526. package/lib/commonjs/mol-plugin-ui/controls/common.js.map +1 -1
  527. package/lib/commonjs/mol-plugin-ui/controls/icons.js +1 -1
  528. package/lib/commonjs/mol-plugin-ui/controls/icons.js.map +1 -1
  529. package/lib/commonjs/mol-plugin-ui/controls/legend.js +3 -3
  530. package/lib/commonjs/mol-plugin-ui/controls/legend.js.map +1 -1
  531. package/lib/commonjs/mol-plugin-ui/controls/line-graph/line-graph-component.js +6 -6
  532. package/lib/commonjs/mol-plugin-ui/controls/line-graph/line-graph-component.js.map +1 -1
  533. package/lib/commonjs/mol-plugin-ui/controls/line-graph/point-component.js +1 -1
  534. package/lib/commonjs/mol-plugin-ui/controls/line-graph/point-component.js.map +1 -1
  535. package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts +2 -2
  536. package/lib/commonjs/mol-plugin-ui/controls/parameters.js +29 -29
  537. package/lib/commonjs/mol-plugin-ui/controls/parameters.js.map +1 -1
  538. package/lib/commonjs/mol-plugin-ui/controls/screenshot.js +1 -1
  539. package/lib/commonjs/mol-plugin-ui/controls/screenshot.js.map +1 -1
  540. package/lib/commonjs/mol-plugin-ui/controls/slider.js +9 -9
  541. package/lib/commonjs/mol-plugin-ui/controls/slider.js.map +1 -1
  542. package/lib/commonjs/mol-plugin-ui/controls.js +2 -2
  543. package/lib/commonjs/mol-plugin-ui/controls.js.map +1 -1
  544. package/lib/commonjs/mol-plugin-ui/plugin.js +3 -3
  545. package/lib/commonjs/mol-plugin-ui/plugin.js.map +1 -1
  546. package/lib/commonjs/mol-plugin-ui/sequence/chain.js +3 -3
  547. package/lib/commonjs/mol-plugin-ui/sequence/chain.js.map +1 -1
  548. package/lib/commonjs/mol-plugin-ui/sequence/polymer.d.ts +1 -1
  549. package/lib/commonjs/mol-plugin-ui/sequence/sequence.js +4 -4
  550. package/lib/commonjs/mol-plugin-ui/sequence/sequence.js.map +1 -1
  551. package/lib/commonjs/mol-plugin-ui/sequence.js +8 -8
  552. package/lib/commonjs/mol-plugin-ui/sequence.js.map +1 -1
  553. package/lib/commonjs/mol-plugin-ui/state/actions.js +1 -1
  554. package/lib/commonjs/mol-plugin-ui/state/actions.js.map +1 -1
  555. package/lib/commonjs/mol-plugin-ui/state/common.js +12 -11
  556. package/lib/commonjs/mol-plugin-ui/state/common.js.map +1 -1
  557. package/lib/commonjs/mol-plugin-ui/state/snapshots.js +14 -12
  558. package/lib/commonjs/mol-plugin-ui/state/snapshots.js.map +1 -1
  559. package/lib/commonjs/mol-plugin-ui/state/tree.js +8 -8
  560. package/lib/commonjs/mol-plugin-ui/state/tree.js.map +1 -1
  561. package/lib/commonjs/mol-plugin-ui/structure/components.js +4 -4
  562. package/lib/commonjs/mol-plugin-ui/structure/components.js.map +1 -1
  563. package/lib/commonjs/mol-plugin-ui/structure/focus.js +4 -4
  564. package/lib/commonjs/mol-plugin-ui/structure/focus.js.map +1 -1
  565. package/lib/commonjs/mol-plugin-ui/structure/generic.js +2 -2
  566. package/lib/commonjs/mol-plugin-ui/structure/generic.js.map +1 -1
  567. package/lib/commonjs/mol-plugin-ui/structure/measurements.d.ts +1 -1
  568. package/lib/commonjs/mol-plugin-ui/structure/measurements.js +6 -6
  569. package/lib/commonjs/mol-plugin-ui/structure/measurements.js.map +1 -1
  570. package/lib/commonjs/mol-plugin-ui/structure/selection.d.ts +1 -1
  571. package/lib/commonjs/mol-plugin-ui/structure/selection.js +5 -4
  572. package/lib/commonjs/mol-plugin-ui/structure/selection.js.map +1 -1
  573. package/lib/commonjs/mol-plugin-ui/structure/source.js +12 -12
  574. package/lib/commonjs/mol-plugin-ui/structure/source.js.map +1 -1
  575. package/lib/commonjs/mol-plugin-ui/structure/superposition.js +4 -4
  576. package/lib/commonjs/mol-plugin-ui/structure/superposition.js.map +1 -1
  577. package/lib/commonjs/mol-plugin-ui/structure/volume.js +2 -2
  578. package/lib/commonjs/mol-plugin-ui/structure/volume.js.map +1 -1
  579. package/lib/commonjs/mol-repr/representation.d.ts +9 -0
  580. package/lib/commonjs/mol-repr/representation.js +47 -8
  581. package/lib/commonjs/mol-repr/representation.js.map +1 -1
  582. package/lib/commonjs/mol-repr/shape/loci/angle.js +2 -2
  583. package/lib/commonjs/mol-repr/shape/loci/angle.js.map +1 -1
  584. package/lib/commonjs/mol-repr/shape/loci/dihedral.js +2 -2
  585. package/lib/commonjs/mol-repr/shape/loci/dihedral.js.map +1 -1
  586. package/lib/commonjs/mol-repr/shape/loci/distance.js +2 -2
  587. package/lib/commonjs/mol-repr/shape/loci/distance.js.map +1 -1
  588. package/lib/commonjs/mol-repr/shape/loci/label.js +1 -1
  589. package/lib/commonjs/mol-repr/shape/loci/label.js.map +1 -1
  590. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -1
  591. package/lib/commonjs/mol-repr/shape/loci/orientation.js +3 -3
  592. package/lib/commonjs/mol-repr/shape/loci/orientation.js.map +1 -1
  593. package/lib/commonjs/mol-repr/shape/loci/plane.js +1 -1
  594. package/lib/commonjs/mol-repr/shape/loci/plane.js.map +1 -1
  595. package/lib/commonjs/mol-repr/shape/representation.js +5 -0
  596. package/lib/commonjs/mol-repr/shape/representation.js.map +1 -1
  597. package/lib/commonjs/mol-repr/structure/complex-representation.js +11 -4
  598. package/lib/commonjs/mol-repr/structure/complex-representation.js.map +1 -1
  599. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +6 -6
  600. package/lib/commonjs/mol-repr/structure/complex-visual.js +11 -5
  601. package/lib/commonjs/mol-repr/structure/complex-visual.js.map +1 -1
  602. package/lib/commonjs/mol-repr/structure/params.d.ts +2 -2
  603. package/lib/commonjs/mol-repr/structure/registry.d.ts +19 -19
  604. package/lib/commonjs/mol-repr/structure/registry.js +1 -1
  605. package/lib/commonjs/mol-repr/structure/registry.js.map +1 -1
  606. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -3
  607. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -3
  608. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -3
  609. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +6 -6
  610. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -3
  611. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +9 -9
  612. package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +3 -3
  613. package/lib/commonjs/mol-repr/structure/representation/label.d.ts +3 -3
  614. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +3 -3
  615. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +9 -9
  616. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -3
  617. package/lib/commonjs/mol-repr/structure/representation/point.d.ts +3 -3
  618. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -3
  619. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -3
  620. package/lib/commonjs/mol-repr/structure/units-representation.js +16 -16
  621. package/lib/commonjs/mol-repr/structure/units-representation.js.map +1 -1
  622. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +8 -8
  623. package/lib/commonjs/mol-repr/structure/units-visual.js +11 -5
  624. package/lib/commonjs/mol-repr/structure/units-visual.js.map +1 -1
  625. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -2
  626. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -1
  627. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -2
  628. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -1
  629. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -1
  630. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -1
  631. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -1
  632. package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +1 -1
  633. package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +1 -1
  634. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +2 -2
  635. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -1
  636. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -2
  637. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +12 -12
  638. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.js +14 -12
  639. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.js.map +1 -1
  640. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -1
  641. package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +1 -1
  642. package/lib/commonjs/mol-repr/structure/visual/label-text.js +3 -3
  643. package/lib/commonjs/mol-repr/structure/visual/label-text.js.map +1 -1
  644. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +3 -3
  645. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.js +5 -4
  646. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.js.map +1 -1
  647. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -1
  648. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -1
  649. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -1
  650. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -1
  651. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -2
  652. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -2
  653. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -1
  654. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -1
  655. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +4 -4
  656. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -1
  657. package/lib/commonjs/mol-repr/structure/visual/util/color.d.ts +2 -2
  658. package/lib/commonjs/mol-repr/structure/visual/util/common.d.ts +1 -1
  659. package/lib/commonjs/mol-repr/visual.d.ts +21 -13
  660. package/lib/commonjs/mol-repr/visual.js +53 -6
  661. package/lib/commonjs/mol-repr/visual.js.map +1 -1
  662. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +3 -3
  663. package/lib/commonjs/mol-repr/volume/registry.d.ts +2 -2
  664. package/lib/commonjs/mol-repr/volume/registry.js +1 -1
  665. package/lib/commonjs/mol-repr/volume/registry.js.map +1 -1
  666. package/lib/commonjs/mol-repr/volume/representation.d.ts +1 -1
  667. package/lib/commonjs/mol-repr/volume/representation.js +12 -3
  668. package/lib/commonjs/mol-repr/volume/representation.js.map +1 -1
  669. package/lib/commonjs/mol-repr/volume/slice.d.ts +3 -3
  670. package/lib/commonjs/mol-script/language/expression-formatter.js +6 -6
  671. package/lib/commonjs/mol-script/language/expression-formatter.js.map +1 -1
  672. package/lib/commonjs/mol-script/language/helpers.js +4 -4
  673. package/lib/commonjs/mol-script/language/helpers.js.map +1 -1
  674. package/lib/commonjs/mol-script/language/parser.js +1 -1
  675. package/lib/commonjs/mol-script/language/parser.js.map +1 -1
  676. package/lib/commonjs/mol-script/language/symbol-table/structure-query.js +3 -3
  677. package/lib/commonjs/mol-script/language/symbol-table/structure-query.js.map +1 -1
  678. package/lib/commonjs/mol-script/language/symbol.js +1 -1
  679. package/lib/commonjs/mol-script/language/symbol.js.map +1 -1
  680. package/lib/commonjs/mol-script/runtime/query/base.js +2 -2
  681. package/lib/commonjs/mol-script/runtime/query/base.js.map +1 -1
  682. package/lib/commonjs/mol-script/script/mol-script/symbols.js +3 -3
  683. package/lib/commonjs/mol-script/script/mol-script/symbols.js.map +1 -1
  684. package/lib/commonjs/mol-state/state/builder.js +1 -1
  685. package/lib/commonjs/mol-state/state/builder.js.map +1 -1
  686. package/lib/commonjs/mol-state/state.js +14 -12
  687. package/lib/commonjs/mol-state/state.js.map +1 -1
  688. package/lib/commonjs/mol-state/transformer.js +3 -3
  689. package/lib/commonjs/mol-state/transformer.js.map +1 -1
  690. package/lib/commonjs/mol-state/tree/transient.js +3 -3
  691. package/lib/commonjs/mol-state/tree/transient.js.map +1 -1
  692. package/lib/commonjs/mol-task/execution/observable.js +1 -5
  693. package/lib/commonjs/mol-task/execution/observable.js.map +1 -1
  694. package/lib/commonjs/mol-task/execution/progress.js +4 -4
  695. package/lib/commonjs/mol-task/execution/progress.js.map +1 -1
  696. package/lib/commonjs/mol-task/task.js +1 -1
  697. package/lib/commonjs/mol-task/task.js.map +1 -1
  698. package/lib/commonjs/mol-task/util/multistep.js +1 -1
  699. package/lib/commonjs/mol-task/util/multistep.js.map +1 -1
  700. package/lib/commonjs/mol-task/util/user-timing.js +3 -3
  701. package/lib/commonjs/mol-task/util/user-timing.js.map +1 -1
  702. package/lib/commonjs/mol-theme/color/chain-id.js +1 -1
  703. package/lib/commonjs/mol-theme/color/chain-id.js.map +1 -1
  704. package/lib/commonjs/mol-theme/color/entity-id.js +1 -1
  705. package/lib/commonjs/mol-theme/color/entity-id.js.map +1 -1
  706. package/lib/commonjs/mol-theme/color/entity-source.js +4 -4
  707. package/lib/commonjs/mol-theme/color/entity-source.js.map +1 -1
  708. package/lib/commonjs/mol-theme/color/operator-hkl.js +2 -2
  709. package/lib/commonjs/mol-theme/color/operator-hkl.js.map +1 -1
  710. package/lib/commonjs/mol-theme/label.js +27 -27
  711. package/lib/commonjs/mol-theme/label.js.map +1 -1
  712. package/lib/commonjs/mol-theme/theme.js +3 -3
  713. package/lib/commonjs/mol-theme/theme.js.map +1 -1
  714. package/lib/commonjs/mol-util/assets.js +3 -3
  715. package/lib/commonjs/mol-util/assets.js.map +1 -1
  716. package/lib/commonjs/mol-util/color/color.js +2 -2
  717. package/lib/commonjs/mol-util/color/color.js.map +1 -1
  718. package/lib/commonjs/mol-util/color/lists.js +1 -1
  719. package/lib/commonjs/mol-util/color/lists.js.map +1 -1
  720. package/lib/commonjs/mol-util/color/palette.js +2 -2
  721. package/lib/commonjs/mol-util/color/palette.js.map +1 -1
  722. package/lib/commonjs/mol-util/console-logger.js +9 -9
  723. package/lib/commonjs/mol-util/console-logger.js.map +1 -1
  724. package/lib/commonjs/mol-util/data-source.js +5 -5
  725. package/lib/commonjs/mol-util/data-source.js.map +1 -1
  726. package/lib/commonjs/mol-util/download.js +1 -1
  727. package/lib/commonjs/mol-util/download.js.map +1 -1
  728. package/lib/commonjs/mol-util/graphql-client.js +2 -2
  729. package/lib/commonjs/mol-util/graphql-client.js.map +1 -1
  730. package/lib/commonjs/mol-util/index.js +2 -2
  731. package/lib/commonjs/mol-util/index.js.map +1 -1
  732. package/lib/commonjs/mol-util/monadic-parser.js +4 -4
  733. package/lib/commonjs/mol-util/monadic-parser.js.map +1 -1
  734. package/lib/commonjs/mol-util/now.js +4 -4
  735. package/lib/commonjs/mol-util/now.js.map +1 -1
  736. package/lib/commonjs/mol-util/object.js +1 -1
  737. package/lib/commonjs/mol-util/object.js.map +1 -1
  738. package/lib/commonjs/mol-util/performance-monitor.js +4 -4
  739. package/lib/commonjs/mol-util/performance-monitor.js.map +1 -1
  740. package/lib/commonjs/mol-util/string.js +3 -3
  741. package/lib/commonjs/mol-util/string.js.map +1 -1
  742. package/lib/commonjs/mol-util/url.js +2 -2
  743. package/lib/commonjs/mol-util/url.js.map +1 -1
  744. package/lib/commonjs/mol-util/zip/deflate.js +1 -1
  745. package/lib/commonjs/mol-util/zip/deflate.js.map +1 -1
  746. package/lib/commonjs/mol-util/zip/inflate.js +1 -1
  747. package/lib/commonjs/mol-util/zip/inflate.js.map +1 -1
  748. package/lib/commonjs/mol-util/zip/zip.js +1 -1
  749. package/lib/commonjs/mol-util/zip/zip.js.map +1 -1
  750. package/lib/commonjs/perf-tests/mol-script.js +1 -1
  751. package/lib/commonjs/perf-tests/mol-script.js.map +1 -1
  752. package/lib/commonjs/perf-tests/sets.js +1 -1
  753. package/lib/commonjs/perf-tests/sets.js.map +1 -1
  754. package/lib/commonjs/perf-tests/sort.js +1 -1
  755. package/lib/commonjs/perf-tests/sort.js.map +1 -1
  756. package/lib/commonjs/perf-tests/string-builder.js +2 -2
  757. package/lib/commonjs/perf-tests/string-builder.js.map +1 -1
  758. package/lib/commonjs/perf-tests/structure.js +7 -7
  759. package/lib/commonjs/perf-tests/structure.js.map +1 -1
  760. package/lib/commonjs/perf-tests/test-xtc.js +1 -1
  761. package/lib/commonjs/perf-tests/test-xtc.js.map +1 -1
  762. package/lib/commonjs/servers/common/file-handle.js +1 -1
  763. package/lib/commonjs/servers/common/file-handle.js.map +1 -1
  764. package/lib/commonjs/servers/common/util.js +1 -1
  765. package/lib/commonjs/servers/common/util.js.map +1 -1
  766. package/lib/commonjs/servers/model/config.d.ts +2 -2
  767. package/lib/commonjs/servers/model/config.js +4 -4
  768. package/lib/commonjs/servers/model/config.js.map +1 -1
  769. package/lib/commonjs/servers/model/preprocess/master.js +1 -1
  770. package/lib/commonjs/servers/model/preprocess/master.js.map +1 -1
  771. package/lib/commonjs/servers/model/preprocess/parallel.js +2 -2
  772. package/lib/commonjs/servers/model/preprocess/parallel.js.map +1 -1
  773. package/lib/commonjs/servers/model/preprocess/util.js +3 -3
  774. package/lib/commonjs/servers/model/preprocess/util.js.map +1 -1
  775. package/lib/commonjs/servers/model/properties/providers/pdbe.js +5 -5
  776. package/lib/commonjs/servers/model/properties/providers/pdbe.js.map +1 -1
  777. package/lib/commonjs/servers/model/property-provider.js +2 -2
  778. package/lib/commonjs/servers/model/property-provider.js.map +1 -1
  779. package/lib/commonjs/servers/model/query.js +1 -1
  780. package/lib/commonjs/servers/model/query.js.map +1 -1
  781. package/lib/commonjs/servers/model/server/api-local.js +2 -2
  782. package/lib/commonjs/servers/model/server/api-local.js.map +1 -1
  783. package/lib/commonjs/servers/model/server/api-schema.js +2 -2
  784. package/lib/commonjs/servers/model/server/api-schema.js.map +1 -1
  785. package/lib/commonjs/servers/model/server/api-web-multiple.js +1 -1
  786. package/lib/commonjs/servers/model/server/api-web-multiple.js.map +1 -1
  787. package/lib/commonjs/servers/model/server/api-web.js +4 -4
  788. package/lib/commonjs/servers/model/server/api-web.js.map +1 -1
  789. package/lib/commonjs/servers/model/server/api.js +1 -1
  790. package/lib/commonjs/servers/model/server/api.js.map +1 -1
  791. package/lib/commonjs/servers/model/server/cache.js +3 -3
  792. package/lib/commonjs/servers/model/server/cache.js.map +1 -1
  793. package/lib/commonjs/servers/model/server/jobs.js +3 -3
  794. package/lib/commonjs/servers/model/server/jobs.js.map +1 -1
  795. package/lib/commonjs/servers/model/server/query.js +10 -10
  796. package/lib/commonjs/servers/model/server/query.js.map +1 -1
  797. package/lib/commonjs/servers/model/server/structure-wrapper.js +6 -6
  798. package/lib/commonjs/servers/model/server/structure-wrapper.js.map +1 -1
  799. package/lib/commonjs/servers/model/server.js +3 -3
  800. package/lib/commonjs/servers/model/server.js.map +1 -1
  801. package/lib/commonjs/servers/model/utils/fetch-props-pdbe.js +4 -4
  802. package/lib/commonjs/servers/model/utils/fetch-props-pdbe.js.map +1 -1
  803. package/lib/commonjs/servers/model/utils/writer.js +2 -2
  804. package/lib/commonjs/servers/model/utils/writer.js.map +1 -1
  805. package/lib/commonjs/servers/plugin-state/api-schema.js +2 -2
  806. package/lib/commonjs/servers/plugin-state/api-schema.js.map +1 -1
  807. package/lib/commonjs/servers/plugin-state/index.js +1 -1
  808. package/lib/commonjs/servers/plugin-state/index.js.map +1 -1
  809. package/lib/commonjs/servers/volume/pack/format/dsn6.js +1 -1
  810. package/lib/commonjs/servers/volume/pack/format/dsn6.js.map +1 -1
  811. package/lib/commonjs/servers/volume/pack/main.js +4 -4
  812. package/lib/commonjs/servers/volume/pack/main.js.map +1 -1
  813. package/lib/commonjs/servers/volume/pack/writer.js +1 -1
  814. package/lib/commonjs/servers/volume/pack/writer.js.map +1 -1
  815. package/lib/commonjs/servers/volume/pack.js +1 -1
  816. package/lib/commonjs/servers/volume/pack.js.map +1 -1
  817. package/lib/commonjs/servers/volume/server/api.js +7 -7
  818. package/lib/commonjs/servers/volume/server/api.js.map +1 -1
  819. package/lib/commonjs/servers/volume/server/local-api.js +1 -1
  820. package/lib/commonjs/servers/volume/server/local-api.js.map +1 -1
  821. package/lib/commonjs/servers/volume/server/query/encode.js +3 -3
  822. package/lib/commonjs/servers/volume/server/query/encode.js.map +1 -1
  823. package/lib/commonjs/servers/volume/server/query/execute.js +5 -5
  824. package/lib/commonjs/servers/volume/server/query/execute.js.map +1 -1
  825. package/lib/commonjs/servers/volume/server/version.js +1 -1
  826. package/lib/commonjs/servers/volume/server/version.js.map +1 -1
  827. package/lib/commonjs/servers/volume/server/web-api.js +7 -7
  828. package/lib/commonjs/servers/volume/server/web-api.js.map +1 -1
  829. package/lib/commonjs/servers/volume/server/web-schema.js +6 -6
  830. package/lib/commonjs/servers/volume/server/web-schema.js.map +1 -1
  831. package/lib/commonjs/servers/volume/server.js +2 -2
  832. package/lib/commonjs/servers/volume/server.js.map +1 -1
  833. package/lib/commonjs/tests/browser/font-atlas.js +1 -1
  834. package/lib/commonjs/tests/browser/font-atlas.js.map +1 -1
  835. package/lib/commonjs/tests/browser/render-shape.js +1 -1
  836. package/lib/commonjs/tests/browser/render-shape.js.map +1 -1
  837. package/lib/commonjs/tests/browser/render-structure.js +1 -1
  838. package/lib/commonjs/tests/browser/render-structure.js.map +1 -1
  839. package/lib/examples/basic-wrapper/superposition.js +3 -3
  840. package/lib/examples/basic-wrapper/superposition.js.map +1 -1
  841. package/lib/examples/domain-annotation-server/mapping.js +2 -2
  842. package/lib/examples/domain-annotation-server/mapping.js.map +1 -1
  843. package/lib/examples/domain-annotation-server/server.js +3 -3
  844. package/lib/examples/domain-annotation-server/server.js.map +1 -1
  845. package/lib/examples/proteopedia-wrapper/annotation.js +3 -3
  846. package/lib/examples/proteopedia-wrapper/annotation.js.map +1 -1
  847. package/lib/examples/proteopedia-wrapper/helpers.js +1 -1
  848. package/lib/examples/proteopedia-wrapper/helpers.js.map +1 -1
  849. package/lib/examples/proteopedia-wrapper/index.js +2 -2
  850. package/lib/examples/proteopedia-wrapper/index.js.map +1 -1
  851. package/lib/examples/task.js +6 -6
  852. package/lib/examples/task.js.map +1 -1
  853. package/lib/extensions/alpha-orbitals/transforms.js +2 -2
  854. package/lib/extensions/alpha-orbitals/transforms.js.map +1 -1
  855. package/lib/extensions/anvil/representation.js +1 -1
  856. package/lib/extensions/anvil/representation.js.map +1 -1
  857. package/lib/extensions/cellpack/model.js +15 -15
  858. package/lib/extensions/cellpack/model.js.map +1 -1
  859. package/lib/extensions/cellpack/state.js +5 -5
  860. package/lib/extensions/cellpack/state.js.map +1 -1
  861. package/lib/extensions/cellpack/util.js +4 -4
  862. package/lib/extensions/cellpack/util.js.map +1 -1
  863. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
  864. package/lib/extensions/dnatco/confal-pyramids/util.js +7 -7
  865. package/lib/extensions/dnatco/confal-pyramids/util.js.map +1 -1
  866. package/lib/extensions/g3d/data.js +2 -2
  867. package/lib/extensions/g3d/data.js.map +1 -1
  868. package/lib/extensions/g3d/model.js +2 -2
  869. package/lib/extensions/g3d/model.js.map +1 -1
  870. package/lib/extensions/geo-export/controls.js +3 -3
  871. package/lib/extensions/geo-export/controls.js.map +1 -1
  872. package/lib/extensions/geo-export/glb-exporter.d.ts +1 -0
  873. package/lib/extensions/geo-export/glb-exporter.js +28 -18
  874. package/lib/extensions/geo-export/glb-exporter.js.map +1 -1
  875. package/lib/extensions/geo-export/mesh-exporter.d.ts +31 -2
  876. package/lib/extensions/geo-export/mesh-exporter.js +87 -15
  877. package/lib/extensions/geo-export/mesh-exporter.js.map +1 -1
  878. package/lib/extensions/geo-export/obj-exporter.d.ts +1 -0
  879. package/lib/extensions/geo-export/obj-exporter.js +27 -18
  880. package/lib/extensions/geo-export/obj-exporter.js.map +1 -1
  881. package/lib/extensions/geo-export/stl-exporter.js +1 -1
  882. package/lib/extensions/geo-export/stl-exporter.js.map +1 -1
  883. package/lib/extensions/geo-export/ui.js +24 -20
  884. package/lib/extensions/geo-export/ui.js.map +1 -1
  885. package/lib/extensions/geo-export/usdz-exporter.d.ts +1 -0
  886. package/lib/extensions/geo-export/usdz-exporter.js +31 -21
  887. package/lib/extensions/geo-export/usdz-exporter.js.map +1 -1
  888. package/lib/extensions/mp4-export/controls.js +2 -2
  889. package/lib/extensions/mp4-export/controls.js.map +1 -1
  890. package/lib/extensions/mp4-export/ui.js +7 -6
  891. package/lib/extensions/mp4-export/ui.js.map +1 -1
  892. package/lib/extensions/pdbe/structure-quality-report/behavior.js +1 -1
  893. package/lib/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
  894. package/lib/extensions/pdbe/structure-quality-report/prop.js +1 -1
  895. package/lib/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
  896. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +4 -4
  897. package/lib/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
  898. package/lib/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
  899. package/lib/extensions/rcsb/assembly-symmetry/color.js +1 -1
  900. package/lib/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
  901. package/lib/extensions/rcsb/assembly-symmetry/prop.js +2 -2
  902. package/lib/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
  903. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +2 -2
  904. package/lib/extensions/rcsb/assembly-symmetry/representation.js +7 -7
  905. package/lib/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
  906. package/lib/extensions/rcsb/graphql/types.d.ts +22 -21
  907. package/lib/extensions/rcsb/validation-report/behavior.js +11 -11
  908. package/lib/extensions/rcsb/validation-report/behavior.js.map +1 -1
  909. package/lib/extensions/rcsb/validation-report/prop.js +2 -2
  910. package/lib/extensions/rcsb/validation-report/prop.js.map +1 -1
  911. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -5
  912. package/lib/extensions/rcsb/validation-report/representation.js +2 -2
  913. package/lib/extensions/rcsb/validation-report/representation.js.map +1 -1
  914. package/lib/mol-canvas3d/canvas3d.d.ts +4 -4
  915. package/lib/mol-canvas3d/canvas3d.js +3 -3
  916. package/lib/mol-canvas3d/canvas3d.js.map +1 -1
  917. package/lib/mol-canvas3d/helper/handle-helper.js +1 -1
  918. package/lib/mol-canvas3d/helper/handle-helper.js.map +1 -1
  919. package/lib/mol-canvas3d/passes/draw.js +3 -11
  920. package/lib/mol-canvas3d/passes/draw.js.map +1 -1
  921. package/lib/mol-canvas3d/passes/wboit.js +1 -1
  922. package/lib/mol-canvas3d/passes/wboit.js.map +1 -1
  923. package/lib/mol-canvas3d/util.js +1 -1
  924. package/lib/mol-canvas3d/util.js.map +1 -1
  925. package/lib/mol-data/db/table.js +1 -1
  926. package/lib/mol-data/db/table.js.map +1 -1
  927. package/lib/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
  928. package/lib/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
  929. package/lib/mol-data/int/impl/sorted-array.d.ts +1 -1
  930. package/lib/mol-data/int/impl/sorted-array.js +2 -2
  931. package/lib/mol-data/int/impl/sorted-array.js.map +1 -1
  932. package/lib/mol-data/int/tuple.js +1 -1
  933. package/lib/mol-data/int/tuple.js.map +1 -1
  934. package/lib/mol-data/util/_spec/interval-iterator.spec.js +1 -1
  935. package/lib/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
  936. package/lib/mol-geo/geometry/base.d.ts +13 -1
  937. package/lib/mol-geo/geometry/base.js +34 -1
  938. package/lib/mol-geo/geometry/base.js.map +1 -1
  939. package/lib/mol-geo/geometry/mesh/color-smoothing.d.ts +9 -2
  940. package/lib/mol-geo/geometry/mesh/color-smoothing.js +150 -34
  941. package/lib/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
  942. package/lib/mol-geo/geometry/mesh/mesh.js +1 -1
  943. package/lib/mol-geo/geometry/mesh/mesh.js.map +1 -1
  944. package/lib/mol-geo/geometry/overpaint-data.d.ts +7 -2
  945. package/lib/mol-geo/geometry/overpaint-data.js +11 -2
  946. package/lib/mol-geo/geometry/overpaint-data.js.map +1 -1
  947. package/lib/mol-geo/geometry/spheres/spheres.d.ts +0 -1
  948. package/lib/mol-geo/geometry/text/font-atlas.js +1 -1
  949. package/lib/mol-geo/geometry/text/font-atlas.js.map +1 -1
  950. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +7 -3
  951. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +158 -26
  952. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
  953. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
  954. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -1
  955. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
  956. package/lib/mol-geo/geometry/transparency-data.d.ts +7 -2
  957. package/lib/mol-geo/geometry/transparency-data.js +11 -2
  958. package/lib/mol-geo/geometry/transparency-data.js.map +1 -1
  959. package/lib/mol-geo/primitive/polyhedron.js +1 -1
  960. package/lib/mol-geo/primitive/polyhedron.js.map +1 -1
  961. package/lib/mol-gl/_spec/gl.shim.js +4 -4
  962. package/lib/mol-gl/_spec/gl.shim.js.map +1 -1
  963. package/lib/mol-gl/_spec/renderer.spec.js +1 -1
  964. package/lib/mol-gl/_spec/renderer.spec.js.map +1 -1
  965. package/lib/mol-gl/compute/copy.d.ts +20 -0
  966. package/lib/mol-gl/compute/copy.js +24 -0
  967. package/lib/mol-gl/compute/copy.js.map +1 -0
  968. package/lib/mol-gl/compute/grid3d.js +3 -3
  969. package/lib/mol-gl/compute/grid3d.js.map +1 -1
  970. package/lib/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
  971. package/lib/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
  972. package/lib/mol-gl/compute/marching-cubes/isosurface.js +3 -3
  973. package/lib/mol-gl/compute/marching-cubes/isosurface.js.map +1 -1
  974. package/lib/mol-gl/compute/util.d.ts +25 -6
  975. package/lib/mol-gl/compute/util.js +74 -21
  976. package/lib/mol-gl/compute/util.js.map +1 -1
  977. package/lib/mol-gl/renderable/cylinders.d.ts +8 -0
  978. package/lib/mol-gl/renderable/direct-volume.d.ts +8 -0
  979. package/lib/mol-gl/renderable/image.d.ts +8 -0
  980. package/lib/mol-gl/renderable/lines.d.ts +8 -0
  981. package/lib/mol-gl/renderable/mesh.d.ts +8 -0
  982. package/lib/mol-gl/renderable/points.d.ts +8 -0
  983. package/lib/mol-gl/renderable/schema.d.ts +16 -0
  984. package/lib/mol-gl/renderable/schema.js +8 -0
  985. package/lib/mol-gl/renderable/schema.js.map +1 -1
  986. package/lib/mol-gl/renderable/spheres.d.ts +8 -0
  987. package/lib/mol-gl/renderable/text.d.ts +8 -0
  988. package/lib/mol-gl/renderable/texture-mesh.d.ts +22 -13
  989. package/lib/mol-gl/renderable/texture-mesh.js +2 -2
  990. package/lib/mol-gl/renderable/texture-mesh.js.map +1 -1
  991. package/lib/mol-gl/renderable/util.js +1 -1
  992. package/lib/mol-gl/renderable/util.js.map +1 -1
  993. package/lib/mol-gl/renderer.d.ts +2 -2
  994. package/lib/mol-gl/renderer.js +3 -0
  995. package/lib/mol-gl/renderer.js.map +1 -1
  996. package/lib/mol-gl/scene.js +1 -1
  997. package/lib/mol-gl/scene.js.map +1 -1
  998. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
  999. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
  1000. package/lib/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
  1001. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  1002. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  1003. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
  1004. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  1005. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  1006. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
  1007. package/lib/mol-gl/shader/compute/color-smoothing/accumulate.frag.d.ts +1 -1
  1008. package/lib/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +1 -1
  1009. package/lib/mol-gl/shader/compute/color-smoothing/accumulate.frag.js.map +1 -1
  1010. package/lib/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
  1011. package/lib/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
  1012. package/lib/mol-gl/shader/compute/color-smoothing/accumulate.vert.js.map +1 -1
  1013. package/lib/mol-gl/shader/compute/color-smoothing/normalize.frag.d.ts +1 -1
  1014. package/lib/mol-gl/shader/compute/color-smoothing/normalize.frag.js +1 -1
  1015. package/lib/mol-gl/shader/compute/color-smoothing/normalize.frag.js.map +1 -1
  1016. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  1017. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  1018. package/lib/mol-gl/shader/direct-volume.frag.js.map +1 -1
  1019. package/lib/mol-gl/shader/mesh.vert.d.ts +1 -1
  1020. package/lib/mol-gl/shader/mesh.vert.js +1 -1
  1021. package/lib/mol-gl/shader/mesh.vert.js.map +1 -1
  1022. package/lib/mol-gl/shader-code.js +8 -8
  1023. package/lib/mol-gl/shader-code.js.map +1 -1
  1024. package/lib/mol-gl/webgl/buffer.d.ts +3 -2
  1025. package/lib/mol-gl/webgl/buffer.js +5 -5
  1026. package/lib/mol-gl/webgl/buffer.js.map +1 -1
  1027. package/lib/mol-gl/webgl/compat.js +3 -3
  1028. package/lib/mol-gl/webgl/compat.js.map +1 -1
  1029. package/lib/mol-gl/webgl/context.d.ts +1 -1
  1030. package/lib/mol-gl/webgl/context.js +2 -2
  1031. package/lib/mol-gl/webgl/context.js.map +1 -1
  1032. package/lib/mol-gl/webgl/extensions.js +1 -1
  1033. package/lib/mol-gl/webgl/extensions.js.map +1 -1
  1034. package/lib/mol-gl/webgl/framebuffer.js +1 -1
  1035. package/lib/mol-gl/webgl/framebuffer.js.map +1 -1
  1036. package/lib/mol-gl/webgl/program.d.ts +1 -1
  1037. package/lib/mol-gl/webgl/program.js +14 -12
  1038. package/lib/mol-gl/webgl/program.js.map +1 -1
  1039. package/lib/mol-gl/webgl/render-item.d.ts +3 -2
  1040. package/lib/mol-gl/webgl/render-item.js +2 -2
  1041. package/lib/mol-gl/webgl/render-item.js.map +1 -1
  1042. package/lib/mol-gl/webgl/resources.js +2 -2
  1043. package/lib/mol-gl/webgl/resources.js.map +1 -1
  1044. package/lib/mol-gl/webgl/shader.js +3 -3
  1045. package/lib/mol-gl/webgl/shader.js.map +1 -1
  1046. package/lib/mol-gl/webgl/state.d.ts +4 -1
  1047. package/lib/mol-gl/webgl/state.js +25 -1
  1048. package/lib/mol-gl/webgl/state.js.map +1 -1
  1049. package/lib/mol-gl/webgl/texture.js +2 -2
  1050. package/lib/mol-gl/webgl/texture.js.map +1 -1
  1051. package/lib/mol-gl/webgl/uniform.js +2 -2
  1052. package/lib/mol-gl/webgl/uniform.js.map +1 -1
  1053. package/lib/mol-gl/webgl/vertex-array.d.ts +3 -2
  1054. package/lib/mol-gl/webgl/vertex-array.js +9 -2
  1055. package/lib/mol-gl/webgl/vertex-array.js.map +1 -1
  1056. package/lib/mol-io/common/file-handle.js +1 -1
  1057. package/lib/mol-io/common/file-handle.js.map +1 -1
  1058. package/lib/mol-io/common/typed-array.d.ts +1 -1
  1059. package/lib/mol-io/common/typed-array.js +1 -1
  1060. package/lib/mol-io/common/typed-array.js.map +1 -1
  1061. package/lib/mol-io/reader/_spec/sdf.spec.js +51 -0
  1062. package/lib/mol-io/reader/_spec/sdf.spec.js.map +1 -1
  1063. package/lib/mol-io/reader/ccp4/parser.js +1 -1
  1064. package/lib/mol-io/reader/ccp4/parser.js.map +1 -1
  1065. package/lib/mol-io/reader/cif/binary/parser.js +1 -1
  1066. package/lib/mol-io/reader/cif/binary/parser.js.map +1 -1
  1067. package/lib/mol-io/reader/cif/data-model.js +7 -7
  1068. package/lib/mol-io/reader/cif/data-model.js.map +1 -1
  1069. package/lib/mol-io/reader/cif/schema/bird.d.ts +2 -2
  1070. package/lib/mol-io/reader/cif/schema/bird.js +1 -1
  1071. package/lib/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  1072. package/lib/mol-io/reader/cif/schema/ccd.js +1 -1
  1073. package/lib/mol-io/reader/cif/schema/cif-core.d.ts +8 -5
  1074. package/lib/mol-io/reader/cif/schema/cif-core.js +15 -5
  1075. package/lib/mol-io/reader/cif/schema/cif-core.js.map +1 -1
  1076. package/lib/mol-io/reader/cif/schema/density-server.d.ts +4 -4
  1077. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +4 -4
  1078. package/lib/mol-io/reader/cif/schema/mmcif.js +1 -1
  1079. package/lib/mol-io/reader/cif/schema.js +7 -7
  1080. package/lib/mol-io/reader/cif/schema.js.map +1 -1
  1081. package/lib/mol-io/reader/cif/text/parser.js +2 -2
  1082. package/lib/mol-io/reader/cif/text/parser.js.map +1 -1
  1083. package/lib/mol-io/reader/dcd/parser.js +2 -2
  1084. package/lib/mol-io/reader/dcd/parser.js.map +1 -1
  1085. package/lib/mol-io/reader/ply/schema.d.ts +1 -1
  1086. package/lib/mol-io/reader/ply/schema.js +1 -1
  1087. package/lib/mol-io/reader/ply/schema.js.map +1 -1
  1088. package/lib/mol-io/reader/result.js +1 -1
  1089. package/lib/mol-io/reader/result.js.map +1 -1
  1090. package/lib/mol-io/reader/sdf/parser-v3-util.d.ts +9 -0
  1091. package/lib/mol-io/reader/sdf/parser-v3-util.js +84 -0
  1092. package/lib/mol-io/reader/sdf/parser-v3-util.js.map +1 -0
  1093. package/lib/mol-io/reader/sdf/parser.d.ts +1 -1
  1094. package/lib/mol-io/reader/sdf/parser.js +12 -4
  1095. package/lib/mol-io/reader/sdf/parser.js.map +1 -1
  1096. package/lib/mol-io/writer/cif/encoder/text.js +3 -3
  1097. package/lib/mol-io/writer/cif/encoder/text.js.map +1 -1
  1098. package/lib/mol-io/writer/cif/encoder.js +5 -5
  1099. package/lib/mol-io/writer/cif/encoder.js.map +1 -1
  1100. package/lib/mol-io/writer/mol/encoder.js +4 -4
  1101. package/lib/mol-io/writer/mol/encoder.js.map +1 -1
  1102. package/lib/mol-io/writer/mol2/encoder.js +6 -6
  1103. package/lib/mol-io/writer/mol2/encoder.js.map +1 -1
  1104. package/lib/mol-math/geometry/gaussian-density/gpu.js +1 -1
  1105. package/lib/mol-math/geometry/gaussian-density/gpu.js.map +1 -1
  1106. package/lib/mol-math/geometry/spacegroup/construction.js +8 -8
  1107. package/lib/mol-math/geometry/spacegroup/construction.js.map +1 -1
  1108. package/lib/mol-math/geometry/spacegroup/tables.js +1 -1
  1109. package/lib/mol-math/geometry/spacegroup/tables.js.map +1 -1
  1110. package/lib/mol-math/geometry/symmetry-operator.js +4 -4
  1111. package/lib/mol-math/geometry/symmetry-operator.js.map +1 -1
  1112. package/lib/mol-math/graph/inter-unit-graph.js +2 -2
  1113. package/lib/mol-math/graph/inter-unit-graph.js.map +1 -1
  1114. package/lib/mol-math/linear-algebra/3d/quat.js +1 -1
  1115. package/lib/mol-math/linear-algebra/3d/quat.js.map +1 -1
  1116. package/lib/mol-math/linear-algebra/3d/vec2.js +1 -1
  1117. package/lib/mol-math/linear-algebra/3d/vec2.js.map +1 -1
  1118. package/lib/mol-math/linear-algebra/3d/vec3.js +1 -1
  1119. package/lib/mol-math/linear-algebra/3d/vec3.js.map +1 -1
  1120. package/lib/mol-math/linear-algebra/3d/vec4.js +1 -1
  1121. package/lib/mol-math/linear-algebra/3d/vec4.js.map +1 -1
  1122. package/lib/mol-model/loci.d.ts +2 -2
  1123. package/lib/mol-model/sequence/sequence.js +2 -2
  1124. package/lib/mol-model/sequence/sequence.js.map +1 -1
  1125. package/lib/mol-model/shape/shape.d.ts +1 -1
  1126. package/lib/mol-model/structure/export/categories/atom_site.js +2 -2
  1127. package/lib/mol-model/structure/export/categories/atom_site.js.map +1 -1
  1128. package/lib/mol-model/structure/export/categories/atom_site_operator_mapping.js +1 -1
  1129. package/lib/mol-model/structure/export/categories/atom_site_operator_mapping.js.map +1 -1
  1130. package/lib/mol-model/structure/export/categories/secondary-structure.js +1 -1
  1131. package/lib/mol-model/structure/export/categories/secondary-structure.js.map +1 -1
  1132. package/lib/mol-model/structure/export/mmcif.js +1 -1
  1133. package/lib/mol-model/structure/export/mmcif.js.map +1 -1
  1134. package/lib/mol-model/structure/model/properties/atomic/bonds.js +2 -2
  1135. package/lib/mol-model/structure/model/properties/atomic/bonds.js.map +1 -1
  1136. package/lib/mol-model/structure/model/properties/symmetry.js +3 -3
  1137. package/lib/mol-model/structure/model/properties/symmetry.js.map +1 -1
  1138. package/lib/mol-model/structure/model/properties/utils/atomic-index.js +2 -2
  1139. package/lib/mol-model/structure/model/properties/utils/atomic-index.js.map +1 -1
  1140. package/lib/mol-model/structure/model/properties/utils/coarse-keys.js +1 -1
  1141. package/lib/mol-model/structure/model/properties/utils/coarse-keys.js.map +1 -1
  1142. package/lib/mol-model/structure/model/properties/utils/residue-set.js +1 -1
  1143. package/lib/mol-model/structure/model/properties/utils/residue-set.js.map +1 -1
  1144. package/lib/mol-model/structure/query/context.js +1 -1
  1145. package/lib/mol-model/structure/query/context.js.map +1 -1
  1146. package/lib/mol-model/structure/query/utils/structure-distance.d.ts +54 -5
  1147. package/lib/mol-model/structure/structure/carbohydrates/compute.js +1 -1
  1148. package/lib/mol-model/structure/structure/carbohydrates/compute.js.map +1 -1
  1149. package/lib/mol-model/structure/structure/element/loci.js +2 -2
  1150. package/lib/mol-model/structure/structure/element/loci.js.map +1 -1
  1151. package/lib/mol-model/structure/structure/element/util.js +1 -1
  1152. package/lib/mol-model/structure/structure/element/util.js.map +1 -1
  1153. package/lib/mol-model/structure/structure/properties.d.ts +1 -1
  1154. package/lib/mol-model/structure/structure/properties.js +6 -6
  1155. package/lib/mol-model/structure/structure/properties.js.map +1 -1
  1156. package/lib/mol-model/structure/structure/structure.js +1 -1
  1157. package/lib/mol-model/structure/structure/structure.js.map +1 -1
  1158. package/lib/mol-model/structure/structure/symmetry.js +3 -3
  1159. package/lib/mol-model/structure/structure/symmetry.js.map +1 -1
  1160. package/lib/mol-model/structure/structure/util/superposition-db-mapping.js +1 -1
  1161. package/lib/mol-model/structure/structure/util/superposition-db-mapping.js.map +1 -1
  1162. package/lib/mol-model/volume/volume.js +2 -2
  1163. package/lib/mol-model/volume/volume.js.map +1 -1
  1164. package/lib/mol-model-formats/shape/ply.js +1 -1
  1165. package/lib/mol-model-formats/shape/ply.js.map +1 -1
  1166. package/lib/mol-model-formats/structure/basic/atomic.js +2 -2
  1167. package/lib/mol-model-formats/structure/basic/atomic.js.map +1 -1
  1168. package/lib/mol-model-formats/structure/basic/properties.js +2 -2
  1169. package/lib/mol-model-formats/structure/basic/properties.js.map +1 -1
  1170. package/lib/mol-model-formats/structure/basic/schema.d.ts +1 -1
  1171. package/lib/mol-model-formats/structure/common/component.d.ts +2 -2
  1172. package/lib/mol-model-formats/structure/common/entity.js +6 -6
  1173. package/lib/mol-model-formats/structure/common/entity.js.map +1 -1
  1174. package/lib/mol-model-formats/structure/pdb/assembly.js +10 -10
  1175. package/lib/mol-model-formats/structure/pdb/assembly.js.map +1 -1
  1176. package/lib/mol-model-formats/structure/pdb/conect.js +1 -1
  1177. package/lib/mol-model-formats/structure/pdb/conect.js.map +1 -1
  1178. package/lib/mol-model-formats/structure/pdb/entity.js +1 -1
  1179. package/lib/mol-model-formats/structure/pdb/entity.js.map +1 -1
  1180. package/lib/mol-model-formats/structure/property/assembly.js +1 -1
  1181. package/lib/mol-model-formats/structure/property/assembly.js.map +1 -1
  1182. package/lib/mol-model-formats/structure/property/symmetry.js +1 -1
  1183. package/lib/mol-model-formats/structure/property/symmetry.js.map +1 -1
  1184. package/lib/mol-model-formats/volume/ccp4.js +1 -1
  1185. package/lib/mol-model-formats/volume/ccp4.js.map +1 -1
  1186. package/lib/mol-model-props/common/custom-element-property.js +1 -1
  1187. package/lib/mol-model-props/common/custom-element-property.js.map +1 -1
  1188. package/lib/mol-model-props/common/custom-property.js +1 -1
  1189. package/lib/mol-model-props/common/custom-property.js.map +1 -1
  1190. package/lib/mol-model-props/computed/interactions/common.js +1 -1
  1191. package/lib/mol-model-props/computed/interactions/common.js.map +1 -1
  1192. package/lib/mol-model-props/computed/interactions/refine.js +2 -2
  1193. package/lib/mol-model-props/computed/interactions/refine.js.map +1 -1
  1194. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -1
  1195. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -1
  1196. package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -3
  1197. package/lib/mol-model-props/integrative/cross-link-restraint/property.js +1 -1
  1198. package/lib/mol-model-props/integrative/cross-link-restraint/property.js.map +1 -1
  1199. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -4
  1200. package/lib/mol-model-props/integrative/pair-restraints.js +1 -1
  1201. package/lib/mol-model-props/integrative/pair-restraints.js.map +1 -1
  1202. package/lib/mol-model-props/sequence/best-database-mapping.js +1 -1
  1203. package/lib/mol-model-props/sequence/best-database-mapping.js.map +1 -1
  1204. package/lib/mol-model-props/sequence/themes/best-database-mapping.js +1 -1
  1205. package/lib/mol-model-props/sequence/themes/best-database-mapping.js.map +1 -1
  1206. package/lib/mol-plugin/behavior/behavior.d.ts +1 -1
  1207. package/lib/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js +3 -3
  1208. package/lib/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js.map +1 -1
  1209. package/lib/mol-plugin/behavior/dynamic/custom-props/computed/interactions.js +3 -3
  1210. package/lib/mol-plugin/behavior/dynamic/custom-props/computed/interactions.js.map +1 -1
  1211. package/lib/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js +1 -1
  1212. package/lib/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js.map +1 -1
  1213. package/lib/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
  1214. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +1 -1
  1215. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js.map +1 -1
  1216. package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.js +6 -6
  1217. package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.js.map +1 -1
  1218. package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.js +5 -5
  1219. package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.js.map +1 -1
  1220. package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js +6 -6
  1221. package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js.map +1 -1
  1222. package/lib/mol-plugin/behavior/static/state.js +4 -4
  1223. package/lib/mol-plugin/behavior/static/state.js.map +1 -1
  1224. package/lib/mol-plugin/commands.d.ts +2 -2
  1225. package/lib/mol-plugin/context.js +2 -3
  1226. package/lib/mol-plugin/context.js.map +1 -1
  1227. package/lib/mol-plugin/util/viewport-screenshot.js +1 -1
  1228. package/lib/mol-plugin/util/viewport-screenshot.js.map +1 -1
  1229. package/lib/mol-plugin/version.js +2 -2
  1230. package/lib/mol-plugin-state/actions/file.js +7 -5
  1231. package/lib/mol-plugin-state/actions/file.js.map +1 -1
  1232. package/lib/mol-plugin-state/actions/structure.d.ts +2 -2
  1233. package/lib/mol-plugin-state/actions/structure.js +12 -12
  1234. package/lib/mol-plugin-state/actions/structure.js.map +1 -1
  1235. package/lib/mol-plugin-state/actions/volume.js +16 -16
  1236. package/lib/mol-plugin-state/actions/volume.js.map +1 -1
  1237. package/lib/mol-plugin-state/animation/built-in/model-index.d.ts +3 -3
  1238. package/lib/mol-plugin-state/animation/helpers.d.ts +5 -5
  1239. package/lib/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +2 -2
  1240. package/lib/mol-plugin-state/builder/structure/hierarchy.d.ts +2 -2
  1241. package/lib/mol-plugin-state/builder/structure/hierarchy.js +2 -2
  1242. package/lib/mol-plugin-state/builder/structure/hierarchy.js.map +1 -1
  1243. package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +4 -4
  1244. package/lib/mol-plugin-state/builder/structure/representation-preset.js +1 -1
  1245. package/lib/mol-plugin-state/builder/structure/representation-preset.js.map +1 -1
  1246. package/lib/mol-plugin-state/builder/structure/representation.js +2 -2
  1247. package/lib/mol-plugin-state/builder/structure/representation.js.map +1 -1
  1248. package/lib/mol-plugin-state/builder/structure.js +3 -3
  1249. package/lib/mol-plugin-state/builder/structure.js.map +1 -1
  1250. package/lib/mol-plugin-state/formats/registry.js +1 -1
  1251. package/lib/mol-plugin-state/formats/registry.js.map +1 -1
  1252. package/lib/mol-plugin-state/formats/volume.d.ts +4 -4
  1253. package/lib/mol-plugin-state/formats/volume.js +1 -0
  1254. package/lib/mol-plugin-state/formats/volume.js.map +1 -1
  1255. package/lib/mol-plugin-state/helpers/root-structure.d.ts +2 -2
  1256. package/lib/mol-plugin-state/helpers/root-structure.js +10 -10
  1257. package/lib/mol-plugin-state/helpers/root-structure.js.map +1 -1
  1258. package/lib/mol-plugin-state/helpers/structure-component.d.ts +1 -1
  1259. package/lib/mol-plugin-state/helpers/structure-component.js +3 -3
  1260. package/lib/mol-plugin-state/helpers/structure-component.js.map +1 -1
  1261. package/lib/mol-plugin-state/helpers/structure-query.js +1 -1
  1262. package/lib/mol-plugin-state/helpers/structure-query.js.map +1 -1
  1263. package/lib/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  1264. package/lib/mol-plugin-state/helpers/structure-selection-query.js +19 -8
  1265. package/lib/mol-plugin-state/helpers/structure-selection-query.js.map +1 -1
  1266. package/lib/mol-plugin-state/manager/animation.js +1 -1
  1267. package/lib/mol-plugin-state/manager/animation.js.map +1 -1
  1268. package/lib/mol-plugin-state/manager/interactivity.d.ts +1 -1
  1269. package/lib/mol-plugin-state/manager/loci-label.js +1 -1
  1270. package/lib/mol-plugin-state/manager/loci-label.js.map +1 -1
  1271. package/lib/mol-plugin-state/manager/snapshots.js +3 -2
  1272. package/lib/mol-plugin-state/manager/snapshots.js.map +1 -1
  1273. package/lib/mol-plugin-state/manager/structure/hierarchy.js +2 -2
  1274. package/lib/mol-plugin-state/manager/structure/hierarchy.js.map +1 -1
  1275. package/lib/mol-plugin-state/manager/structure/measurement.js +3 -3
  1276. package/lib/mol-plugin-state/manager/structure/measurement.js.map +1 -1
  1277. package/lib/mol-plugin-state/transforms/data.d.ts +1 -1
  1278. package/lib/mol-plugin-state/transforms/data.js +8 -8
  1279. package/lib/mol-plugin-state/transforms/data.js.map +1 -1
  1280. package/lib/mol-plugin-state/transforms/model.d.ts +3 -3
  1281. package/lib/mol-plugin-state/transforms/model.js +18 -18
  1282. package/lib/mol-plugin-state/transforms/model.js.map +1 -1
  1283. package/lib/mol-plugin-state/transforms/representation.d.ts +6 -6
  1284. package/lib/mol-plugin-state/transforms/representation.js +65 -39
  1285. package/lib/mol-plugin-state/transforms/representation.js.map +1 -1
  1286. package/lib/mol-plugin-state/transforms/volume.js +7 -7
  1287. package/lib/mol-plugin-state/transforms/volume.js.map +1 -1
  1288. package/lib/mol-plugin-ui/base.js +1 -1
  1289. package/lib/mol-plugin-ui/base.js.map +1 -1
  1290. package/lib/mol-plugin-ui/controls/action-menu.js +3 -3
  1291. package/lib/mol-plugin-ui/controls/action-menu.js.map +1 -1
  1292. package/lib/mol-plugin-ui/controls/color.js +2 -2
  1293. package/lib/mol-plugin-ui/controls/color.js.map +1 -1
  1294. package/lib/mol-plugin-ui/controls/common.js +9 -9
  1295. package/lib/mol-plugin-ui/controls/common.js.map +1 -1
  1296. package/lib/mol-plugin-ui/controls/icons.js +1 -1
  1297. package/lib/mol-plugin-ui/controls/icons.js.map +1 -1
  1298. package/lib/mol-plugin-ui/controls/legend.js +3 -3
  1299. package/lib/mol-plugin-ui/controls/legend.js.map +1 -1
  1300. package/lib/mol-plugin-ui/controls/line-graph/line-graph-component.js +6 -6
  1301. package/lib/mol-plugin-ui/controls/line-graph/line-graph-component.js.map +1 -1
  1302. package/lib/mol-plugin-ui/controls/line-graph/point-component.js +1 -1
  1303. package/lib/mol-plugin-ui/controls/line-graph/point-component.js.map +1 -1
  1304. package/lib/mol-plugin-ui/controls/parameters.d.ts +2 -2
  1305. package/lib/mol-plugin-ui/controls/parameters.js +29 -29
  1306. package/lib/mol-plugin-ui/controls/parameters.js.map +1 -1
  1307. package/lib/mol-plugin-ui/controls/screenshot.js +1 -1
  1308. package/lib/mol-plugin-ui/controls/screenshot.js.map +1 -1
  1309. package/lib/mol-plugin-ui/controls/slider.js +9 -9
  1310. package/lib/mol-plugin-ui/controls/slider.js.map +1 -1
  1311. package/lib/mol-plugin-ui/controls.js +2 -2
  1312. package/lib/mol-plugin-ui/controls.js.map +1 -1
  1313. package/lib/mol-plugin-ui/plugin.js +3 -3
  1314. package/lib/mol-plugin-ui/plugin.js.map +1 -1
  1315. package/lib/mol-plugin-ui/sequence/chain.js +3 -3
  1316. package/lib/mol-plugin-ui/sequence/chain.js.map +1 -1
  1317. package/lib/mol-plugin-ui/sequence/polymer.d.ts +1 -1
  1318. package/lib/mol-plugin-ui/sequence/sequence.js +4 -4
  1319. package/lib/mol-plugin-ui/sequence/sequence.js.map +1 -1
  1320. package/lib/mol-plugin-ui/sequence.js +8 -8
  1321. package/lib/mol-plugin-ui/sequence.js.map +1 -1
  1322. package/lib/mol-plugin-ui/skin/base/components/controls.scss +16 -18
  1323. package/lib/mol-plugin-ui/skin/base/components/toast.scss +3 -1
  1324. package/lib/mol-plugin-ui/state/actions.js +1 -1
  1325. package/lib/mol-plugin-ui/state/actions.js.map +1 -1
  1326. package/lib/mol-plugin-ui/state/common.js +12 -11
  1327. package/lib/mol-plugin-ui/state/common.js.map +1 -1
  1328. package/lib/mol-plugin-ui/state/snapshots.js +14 -12
  1329. package/lib/mol-plugin-ui/state/snapshots.js.map +1 -1
  1330. package/lib/mol-plugin-ui/state/tree.js +8 -8
  1331. package/lib/mol-plugin-ui/state/tree.js.map +1 -1
  1332. package/lib/mol-plugin-ui/structure/components.js +4 -4
  1333. package/lib/mol-plugin-ui/structure/components.js.map +1 -1
  1334. package/lib/mol-plugin-ui/structure/focus.js +4 -4
  1335. package/lib/mol-plugin-ui/structure/focus.js.map +1 -1
  1336. package/lib/mol-plugin-ui/structure/generic.js +2 -2
  1337. package/lib/mol-plugin-ui/structure/generic.js.map +1 -1
  1338. package/lib/mol-plugin-ui/structure/measurements.js +6 -6
  1339. package/lib/mol-plugin-ui/structure/measurements.js.map +1 -1
  1340. package/lib/mol-plugin-ui/structure/selection.d.ts +1 -1
  1341. package/lib/mol-plugin-ui/structure/selection.js +5 -4
  1342. package/lib/mol-plugin-ui/structure/selection.js.map +1 -1
  1343. package/lib/mol-plugin-ui/structure/source.js +12 -12
  1344. package/lib/mol-plugin-ui/structure/source.js.map +1 -1
  1345. package/lib/mol-plugin-ui/structure/superposition.js +4 -4
  1346. package/lib/mol-plugin-ui/structure/superposition.js.map +1 -1
  1347. package/lib/mol-plugin-ui/structure/volume.js +2 -2
  1348. package/lib/mol-plugin-ui/structure/volume.js.map +1 -1
  1349. package/lib/mol-repr/representation.d.ts +9 -0
  1350. package/lib/mol-repr/representation.js +47 -8
  1351. package/lib/mol-repr/representation.js.map +1 -1
  1352. package/lib/mol-repr/shape/loci/angle.js +2 -2
  1353. package/lib/mol-repr/shape/loci/angle.js.map +1 -1
  1354. package/lib/mol-repr/shape/loci/dihedral.js +2 -2
  1355. package/lib/mol-repr/shape/loci/dihedral.js.map +1 -1
  1356. package/lib/mol-repr/shape/loci/distance.js +2 -2
  1357. package/lib/mol-repr/shape/loci/distance.js.map +1 -1
  1358. package/lib/mol-repr/shape/loci/label.js +1 -1
  1359. package/lib/mol-repr/shape/loci/label.js.map +1 -1
  1360. package/lib/mol-repr/shape/loci/orientation.d.ts +1 -1
  1361. package/lib/mol-repr/shape/loci/orientation.js +3 -3
  1362. package/lib/mol-repr/shape/loci/orientation.js.map +1 -1
  1363. package/lib/mol-repr/shape/loci/plane.js +1 -1
  1364. package/lib/mol-repr/shape/loci/plane.js.map +1 -1
  1365. package/lib/mol-repr/shape/representation.js +5 -0
  1366. package/lib/mol-repr/shape/representation.js.map +1 -1
  1367. package/lib/mol-repr/structure/complex-representation.js +11 -4
  1368. package/lib/mol-repr/structure/complex-representation.js.map +1 -1
  1369. package/lib/mol-repr/structure/complex-visual.d.ts +6 -6
  1370. package/lib/mol-repr/structure/complex-visual.js +11 -5
  1371. package/lib/mol-repr/structure/complex-visual.js.map +1 -1
  1372. package/lib/mol-repr/structure/params.d.ts +2 -2
  1373. package/lib/mol-repr/structure/registry.d.ts +15 -15
  1374. package/lib/mol-repr/structure/registry.js +1 -1
  1375. package/lib/mol-repr/structure/registry.js.map +1 -1
  1376. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -3
  1377. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -3
  1378. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -3
  1379. package/lib/mol-repr/structure/representation/cartoon.d.ts +6 -6
  1380. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -3
  1381. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -3
  1382. package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +3 -3
  1383. package/lib/mol-repr/structure/representation/label.d.ts +3 -3
  1384. package/lib/mol-repr/structure/representation/line.d.ts +3 -3
  1385. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -3
  1386. package/lib/mol-repr/structure/representation/orientation.d.ts +3 -3
  1387. package/lib/mol-repr/structure/representation/point.d.ts +3 -3
  1388. package/lib/mol-repr/structure/representation/putty.d.ts +3 -3
  1389. package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -3
  1390. package/lib/mol-repr/structure/units-representation.js +16 -16
  1391. package/lib/mol-repr/structure/units-representation.js.map +1 -1
  1392. package/lib/mol-repr/structure/units-visual.d.ts +8 -8
  1393. package/lib/mol-repr/structure/units-visual.js +11 -5
  1394. package/lib/mol-repr/structure/units-visual.js.map +1 -1
  1395. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -2
  1396. package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +1 -1
  1397. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -2
  1398. package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +1 -1
  1399. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -1
  1400. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -1
  1401. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -1
  1402. package/lib/mol-repr/structure/visual/element-cross.d.ts +1 -1
  1403. package/lib/mol-repr/structure/visual/element-point.d.ts +1 -1
  1404. package/lib/mol-repr/structure/visual/element-sphere.d.ts +2 -2
  1405. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -1
  1406. package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -2
  1407. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -4
  1408. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.js +9 -7
  1409. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.js.map +1 -1
  1410. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -1
  1411. package/lib/mol-repr/structure/visual/label-text.d.ts +1 -1
  1412. package/lib/mol-repr/structure/visual/label-text.js +3 -3
  1413. package/lib/mol-repr/structure/visual/label-text.js.map +1 -1
  1414. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -1
  1415. package/lib/mol-repr/structure/visual/molecular-surface-mesh.js +3 -2
  1416. package/lib/mol-repr/structure/visual/molecular-surface-mesh.js.map +1 -1
  1417. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -1
  1418. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -1
  1419. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -1
  1420. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -1
  1421. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -2
  1422. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -2
  1423. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -1
  1424. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -1
  1425. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +4 -4
  1426. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -1
  1427. package/lib/mol-repr/structure/visual/util/color.d.ts +2 -2
  1428. package/lib/mol-repr/structure/visual/util/common.d.ts +1 -1
  1429. package/lib/mol-repr/visual.d.ts +21 -13
  1430. package/lib/mol-repr/visual.js +53 -6
  1431. package/lib/mol-repr/visual.js.map +1 -1
  1432. package/lib/mol-repr/volume/registry.js +1 -1
  1433. package/lib/mol-repr/volume/registry.js.map +1 -1
  1434. package/lib/mol-repr/volume/representation.d.ts +1 -1
  1435. package/lib/mol-repr/volume/representation.js +12 -3
  1436. package/lib/mol-repr/volume/representation.js.map +1 -1
  1437. package/lib/mol-script/language/expression-formatter.js +6 -6
  1438. package/lib/mol-script/language/expression-formatter.js.map +1 -1
  1439. package/lib/mol-script/language/helpers.js +4 -4
  1440. package/lib/mol-script/language/helpers.js.map +1 -1
  1441. package/lib/mol-script/language/parser.js +1 -1
  1442. package/lib/mol-script/language/parser.js.map +1 -1
  1443. package/lib/mol-script/language/symbol-table/structure-query.js +3 -3
  1444. package/lib/mol-script/language/symbol-table/structure-query.js.map +1 -1
  1445. package/lib/mol-script/language/symbol.js +1 -1
  1446. package/lib/mol-script/language/symbol.js.map +1 -1
  1447. package/lib/mol-script/runtime/query/base.js +2 -2
  1448. package/lib/mol-script/runtime/query/base.js.map +1 -1
  1449. package/lib/mol-script/script/mol-script/symbols.js +3 -3
  1450. package/lib/mol-script/script/mol-script/symbols.js.map +1 -1
  1451. package/lib/mol-state/state/builder.js +1 -1
  1452. package/lib/mol-state/state/builder.js.map +1 -1
  1453. package/lib/mol-state/state.js +14 -12
  1454. package/lib/mol-state/state.js.map +1 -1
  1455. package/lib/mol-state/transformer.js +3 -3
  1456. package/lib/mol-state/transformer.js.map +1 -1
  1457. package/lib/mol-state/tree/transient.js +3 -3
  1458. package/lib/mol-state/tree/transient.js.map +1 -1
  1459. package/lib/mol-task/execution/observable.js +1 -5
  1460. package/lib/mol-task/execution/observable.js.map +1 -1
  1461. package/lib/mol-task/execution/progress.js +4 -4
  1462. package/lib/mol-task/execution/progress.js.map +1 -1
  1463. package/lib/mol-task/task.js +1 -1
  1464. package/lib/mol-task/task.js.map +1 -1
  1465. package/lib/mol-task/util/multistep.js +1 -1
  1466. package/lib/mol-task/util/multistep.js.map +1 -1
  1467. package/lib/mol-task/util/scheduler.d.ts +1 -0
  1468. package/lib/mol-task/util/user-timing.js +3 -3
  1469. package/lib/mol-task/util/user-timing.js.map +1 -1
  1470. package/lib/mol-theme/color/chain-id.js +1 -1
  1471. package/lib/mol-theme/color/chain-id.js.map +1 -1
  1472. package/lib/mol-theme/color/entity-id.js +1 -1
  1473. package/lib/mol-theme/color/entity-id.js.map +1 -1
  1474. package/lib/mol-theme/color/entity-source.js +4 -4
  1475. package/lib/mol-theme/color/entity-source.js.map +1 -1
  1476. package/lib/mol-theme/color/operator-hkl.js +2 -2
  1477. package/lib/mol-theme/color/operator-hkl.js.map +1 -1
  1478. package/lib/mol-theme/label.js +27 -27
  1479. package/lib/mol-theme/label.js.map +1 -1
  1480. package/lib/mol-theme/theme.js +3 -3
  1481. package/lib/mol-theme/theme.js.map +1 -1
  1482. package/lib/mol-util/assets.js +3 -3
  1483. package/lib/mol-util/assets.js.map +1 -1
  1484. package/lib/mol-util/color/color.js +2 -2
  1485. package/lib/mol-util/color/color.js.map +1 -1
  1486. package/lib/mol-util/color/lists.js +1 -1
  1487. package/lib/mol-util/color/lists.js.map +1 -1
  1488. package/lib/mol-util/color/palette.d.ts +1 -1
  1489. package/lib/mol-util/color/palette.js +2 -2
  1490. package/lib/mol-util/color/palette.js.map +1 -1
  1491. package/lib/mol-util/console-logger.js +9 -9
  1492. package/lib/mol-util/console-logger.js.map +1 -1
  1493. package/lib/mol-util/data-source.js +5 -5
  1494. package/lib/mol-util/data-source.js.map +1 -1
  1495. package/lib/mol-util/download.js +1 -1
  1496. package/lib/mol-util/download.js.map +1 -1
  1497. package/lib/mol-util/graphql-client.js +2 -2
  1498. package/lib/mol-util/graphql-client.js.map +1 -1
  1499. package/lib/mol-util/index.js +2 -2
  1500. package/lib/mol-util/index.js.map +1 -1
  1501. package/lib/mol-util/monadic-parser.js +4 -4
  1502. package/lib/mol-util/monadic-parser.js.map +1 -1
  1503. package/lib/mol-util/now.js +4 -4
  1504. package/lib/mol-util/now.js.map +1 -1
  1505. package/lib/mol-util/object.js +1 -1
  1506. package/lib/mol-util/object.js.map +1 -1
  1507. package/lib/mol-util/performance-monitor.js +4 -4
  1508. package/lib/mol-util/performance-monitor.js.map +1 -1
  1509. package/lib/mol-util/string.js +3 -3
  1510. package/lib/mol-util/string.js.map +1 -1
  1511. package/lib/mol-util/url.js +2 -2
  1512. package/lib/mol-util/url.js.map +1 -1
  1513. package/lib/mol-util/zip/deflate.js +1 -1
  1514. package/lib/mol-util/zip/deflate.js.map +1 -1
  1515. package/lib/mol-util/zip/inflate.js +1 -1
  1516. package/lib/mol-util/zip/inflate.js.map +1 -1
  1517. package/lib/mol-util/zip/zip.js +1 -1
  1518. package/lib/mol-util/zip/zip.js.map +1 -1
  1519. package/lib/perf-tests/mol-script.js +1 -1
  1520. package/lib/perf-tests/mol-script.js.map +1 -1
  1521. package/lib/perf-tests/sets.js +1 -1
  1522. package/lib/perf-tests/sets.js.map +1 -1
  1523. package/lib/perf-tests/sort.js +1 -1
  1524. package/lib/perf-tests/sort.js.map +1 -1
  1525. package/lib/perf-tests/string-builder.js +2 -2
  1526. package/lib/perf-tests/string-builder.js.map +1 -1
  1527. package/lib/perf-tests/structure.js +7 -7
  1528. package/lib/perf-tests/structure.js.map +1 -1
  1529. package/lib/perf-tests/test-xtc.js +1 -1
  1530. package/lib/perf-tests/test-xtc.js.map +1 -1
  1531. package/lib/servers/common/file-handle.js +1 -1
  1532. package/lib/servers/common/file-handle.js.map +1 -1
  1533. package/lib/servers/common/util.js +1 -1
  1534. package/lib/servers/common/util.js.map +1 -1
  1535. package/lib/servers/model/config.d.ts +2 -2
  1536. package/lib/servers/model/config.js +4 -4
  1537. package/lib/servers/model/config.js.map +1 -1
  1538. package/lib/servers/model/preprocess/master.js +1 -1
  1539. package/lib/servers/model/preprocess/master.js.map +1 -1
  1540. package/lib/servers/model/preprocess/parallel.js +2 -2
  1541. package/lib/servers/model/preprocess/parallel.js.map +1 -1
  1542. package/lib/servers/model/preprocess/util.js +3 -3
  1543. package/lib/servers/model/preprocess/util.js.map +1 -1
  1544. package/lib/servers/model/properties/providers/pdbe.js +5 -5
  1545. package/lib/servers/model/properties/providers/pdbe.js.map +1 -1
  1546. package/lib/servers/model/property-provider.js +2 -2
  1547. package/lib/servers/model/property-provider.js.map +1 -1
  1548. package/lib/servers/model/query.js +1 -1
  1549. package/lib/servers/model/query.js.map +1 -1
  1550. package/lib/servers/model/server/api-local.js +2 -2
  1551. package/lib/servers/model/server/api-local.js.map +1 -1
  1552. package/lib/servers/model/server/api-schema.js +2 -2
  1553. package/lib/servers/model/server/api-schema.js.map +1 -1
  1554. package/lib/servers/model/server/api-web-multiple.js +1 -1
  1555. package/lib/servers/model/server/api-web-multiple.js.map +1 -1
  1556. package/lib/servers/model/server/api-web.js +4 -4
  1557. package/lib/servers/model/server/api-web.js.map +1 -1
  1558. package/lib/servers/model/server/api.js +1 -1
  1559. package/lib/servers/model/server/api.js.map +1 -1
  1560. package/lib/servers/model/server/cache.js +3 -3
  1561. package/lib/servers/model/server/cache.js.map +1 -1
  1562. package/lib/servers/model/server/jobs.js +3 -3
  1563. package/lib/servers/model/server/jobs.js.map +1 -1
  1564. package/lib/servers/model/server/query.js +10 -10
  1565. package/lib/servers/model/server/query.js.map +1 -1
  1566. package/lib/servers/model/server/structure-wrapper.js +6 -6
  1567. package/lib/servers/model/server/structure-wrapper.js.map +1 -1
  1568. package/lib/servers/model/server.js +3 -3
  1569. package/lib/servers/model/server.js.map +1 -1
  1570. package/lib/servers/model/utils/fetch-props-pdbe.js +4 -4
  1571. package/lib/servers/model/utils/fetch-props-pdbe.js.map +1 -1
  1572. package/lib/servers/model/utils/writer.js +2 -2
  1573. package/lib/servers/model/utils/writer.js.map +1 -1
  1574. package/lib/servers/plugin-state/api-schema.js +2 -2
  1575. package/lib/servers/plugin-state/api-schema.js.map +1 -1
  1576. package/lib/servers/plugin-state/index.js +1 -1
  1577. package/lib/servers/plugin-state/index.js.map +1 -1
  1578. package/lib/servers/volume/pack/format/dsn6.js +1 -1
  1579. package/lib/servers/volume/pack/format/dsn6.js.map +1 -1
  1580. package/lib/servers/volume/pack/main.js +4 -4
  1581. package/lib/servers/volume/pack/main.js.map +1 -1
  1582. package/lib/servers/volume/pack/writer.js +1 -1
  1583. package/lib/servers/volume/pack/writer.js.map +1 -1
  1584. package/lib/servers/volume/pack.js +1 -1
  1585. package/lib/servers/volume/pack.js.map +1 -1
  1586. package/lib/servers/volume/server/api.js +7 -7
  1587. package/lib/servers/volume/server/api.js.map +1 -1
  1588. package/lib/servers/volume/server/local-api.js +1 -1
  1589. package/lib/servers/volume/server/local-api.js.map +1 -1
  1590. package/lib/servers/volume/server/query/encode.js +3 -3
  1591. package/lib/servers/volume/server/query/encode.js.map +1 -1
  1592. package/lib/servers/volume/server/query/execute.js +5 -5
  1593. package/lib/servers/volume/server/query/execute.js.map +1 -1
  1594. package/lib/servers/volume/server/version.js +1 -1
  1595. package/lib/servers/volume/server/version.js.map +1 -1
  1596. package/lib/servers/volume/server/web-api.js +7 -7
  1597. package/lib/servers/volume/server/web-api.js.map +1 -1
  1598. package/lib/servers/volume/server/web-schema.js +6 -6
  1599. package/lib/servers/volume/server/web-schema.js.map +1 -1
  1600. package/lib/servers/volume/server.js +2 -2
  1601. package/lib/servers/volume/server.js.map +1 -1
  1602. package/lib/tests/browser/font-atlas.js +1 -1
  1603. package/lib/tests/browser/font-atlas.js.map +1 -1
  1604. package/lib/tests/browser/render-shape.js +1 -1
  1605. package/lib/tests/browser/render-shape.js.map +1 -1
  1606. package/lib/tests/browser/render-structure.js +1 -1
  1607. package/lib/tests/browser/render-structure.js.map +1 -1
  1608. package/lib/tsconfig.commonjs.tsbuildinfo +1 -1
  1609. package/package.json +29 -30
  1610. package/CHANGELOG.md +0 -191

There are too many changes on this page to be displayed.


The amount of changes on this page would crash your brower.

You can still verify the content by downloading the package file manually.