npm - molstar - Versions diffs - 2.3.6 → 2.4.0 - Mend

molstar 2.3.6 → 2.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1610) hide show

package/lib/commonjs/mol-repr/shape/loci/angle.js.map CHANGED Viewed

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1	- 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1	+ 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package/lib/commonjs/mol-repr/shape/loci/dihedral.js CHANGED Viewed

@@ -119,7 +119,7 @@ function getCircle(state, segmentLength) {
 }
 var tmpState = getDihedralState();
 function getDihedralName(data) {
-    return data.quads.length === 1 ? "Dihedral " + (0, label_1.dihedralLabel)(data.quads[0], { measureOnly: true }) : data.quads.length + " Dihedrals";
+    return data.quads.length === 1 ? "Dihedral ".concat((0, label_1.dihedralLabel)(data.quads[0], { measureOnly: true })) : "".concat(data.quads.length, " Dihedrals");
 }
 //
 function buildVectorsLines(data, props, lines) {
@@ -237,7 +237,7 @@ function buildText(data, props, text) {
         var angle = (0, misc_1.radToDeg)(tmpState.angle).toFixed(2);
         if (angle === '-0.00')
             angle = '0.00';
-        var label = props.customText || angle + "\u00B0";
+        var label = props.customText || "".concat(angle, "\u00B0");
         var radius = Math.max(2, tmpState.sphereA.radius, tmpState.sphereB.radius, tmpState.sphereC.radius, tmpState.sphereD.radius);
         var scale = radius / 2;
         builder.add(label, tmpVec[0], tmpVec[1], tmpVec[2], 0.1, scale, i);

package/lib/commonjs/mol-repr/shape/loci/dihedral.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/commonjs/mol-repr/shape/loci/distance.js CHANGED Viewed

@@ -53,7 +53,7 @@ function setDistanceState(pair, state) {
 }
 var tmpState = getDistanceState();
 function getDistanceName(data, unitLabel) {
-    return data.pairs.length === 1 ? "Distance " + (0, label_1.distanceLabel)(data.pairs[0], { unitLabel: unitLabel, measureOnly: true }) : data.pairs.length + " Distances";
+    return data.pairs.length === 1 ? "Distance ".concat((0, label_1.distanceLabel)(data.pairs[0], { unitLabel: unitLabel, measureOnly: true })) : "".concat(data.pairs.length, " Distances");
 }
 //
 function buildLines(data, props, lines) {
@@ -76,7 +76,7 @@ function buildText(data, props, text) {
     for (var i = 0, il = data.pairs.length; i < il; ++i) {
         setDistanceState(data.pairs[i], tmpState);
         var center = tmpState.center, distance = tmpState.distance, sphereA = tmpState.sphereA, sphereB = tmpState.sphereB;
-        var label = props.customText || distance.toFixed(2) + " " + props.unitLabel;
+        var label = props.customText || "".concat(distance.toFixed(2), " ").concat(props.unitLabel);
         var radius = Math.max(2, sphereA.radius, sphereB.radius);
         var scale = radius / 2;
         builder.add(label, center[0], center[1], center[2], 1, scale, i);

package/lib/commonjs/mol-repr/shape/loci/distance.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/commonjs/mol-repr/shape/loci/label.js CHANGED Viewed

@@ -29,7 +29,7 @@ function label(info, condensed) {
     return info.label || (0, label_1.lociLabel)(info.loci, { hidePrefix: true, htmlStyling: false, condensed: condensed });
 }
 function getLabelName(data) {
-    return data.infos.length === 1 ? label(data.infos[0]) : data.infos.length + " Labels";
+    return data.infos.length === 1 ? label(data.infos[0]) : "".concat(data.infos.length, " Labels");
 }
 //
 function buildText(data, props, text) {

package/lib/commonjs/mol-repr/shape/loci/label.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts CHANGED Viewed

@@ -10,7 +10,7 @@ export interface OrientationData {
     locis: StructureElement.Loci[];
 }
 export declare const OrientationParams: {
-    visuals: PD.MultiSelect<"axes" | "ellipsoid" | "box">;
+    visuals: PD.MultiSelect<"ellipsoid" | "axes" | "box">;
     color: PD.Color;
     scaleFactor: PD.Numeric;
     radiusScale: PD.Numeric;

package/lib/commonjs/mol-repr/shape/loci/orientation.js CHANGED Viewed

@@ -39,7 +39,7 @@ exports.OrientationParams = (0, tslib_1.__assign)((0, tslib_1.__assign)((0, tsli
 //
 function getAxesName(locis) {
     var label = (0, label_1.structureElementLociLabelMany)(locis, { countsOnly: true });
-    return "Principal Axes of " + label;
+    return "Principal Axes of ".concat(label);
 }
 function buildAxesMesh(data, props, mesh) {
     var state = mesh_builder_1.MeshBuilder.createState(256, 128, mesh);
@@ -57,7 +57,7 @@ function getAxesShape(ctx, data, props, shape) {
 //
 function getBoxName(locis) {
     var label = (0, label_1.structureElementLociLabelMany)(locis, { countsOnly: true });
-    return "Oriented Box of " + label;
+    return "Oriented Box of ".concat(label);
 }
 function buildBoxMesh(data, props, mesh) {
     var state = mesh_builder_1.MeshBuilder.createState(256, 128, mesh);
@@ -75,7 +75,7 @@ function getBoxShape(ctx, data, props, shape) {
 //
 function getEllipsoidName(locis) {
     var label = (0, label_1.structureElementLociLabelMany)(locis, { countsOnly: true });
-    return "Oriented Ellipsoid of " + label;
+    return "Oriented Ellipsoid of ".concat(label);
 }
 function buildEllipsoidMesh(data, props, mesh) {
     var state = mesh_builder_1.MeshBuilder.createState(256, 128, mesh);

package/lib/commonjs/mol-repr/shape/loci/orientation.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ {"version":3,"file":"orientation.js","sourceRoot":"","sources":["../../../../../src/mol-repr/shape/loci/orientation.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAGH,uEAA2E;AAC3E,uDAA2D;AAC3D,oDAAwD;AACxD,uDAAyG;AACzG,kDAAiD;AACjD,4DAA2D;AAC3D,4EAA0E;AAC1E,kDAAyE;AACzE,oEAAsE;AACtE,kEAA4E;AAC5E,8EAAgF;AAChF,uDAAoD;AACpD,mEAAwD;AACxD,iEAAgE;AAChE,0DAAgE;AAMhE,IAAM,YAAY,GAAG;IACjB,KAAK,EAAE,kCAAE,CAAC,KAAK,CAAC,kBAAU,CAAC,MAAM,CAAC;IAClC,WAAW,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC;IAC5D,WAAW,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC;CAC/D,CAAC;AAEF,IAAM,UAAU,mDACT,WAAI,CAAC,MAAM,GACX,YAAY,CAClB,CAAC;AAGF,IAAM,SAAS,mDACR,WAAI,CAAC,MAAM,GACX,YAAY,CAClB,CAAC;AAGF,IAAM,eAAe,mDACd,WAAI,CAAC,MAAM,GACX,YAAY,CAClB,CAAC;AAGF,IAAM,kBAAkB,GAAG;IACvB,MAAM,EAAE,UAAC,GAA0B,EAAE,SAAkE,IAAK,OAAA,IAAA,oCAAmB,EAAC,YAAY,EAAE,WAAI,CAAC,KAAK,CAAC,EAA7C,CAA6C;IACzJ,KAAK,EAAE,UAAC,GAA0B,EAAE,SAAiE,IAAK,OAAA,IAAA,oCAAmB,EAAC,WAAW,EAAE,WAAI,CAAC,KAAK,CAAC,EAA5C,CAA4C;IACtJ,WAAW,EAAE,UAAC,GAA0B,EAAE,SAAuE,IAAK,OAAA,IAAA,oCAAmB,EAAC,iBAAiB,EAAE,WAAI,CAAC,KAAK,CAAC,EAAlD,CAAkD;CAC3K,CAAC;AAEW,QAAA,iBAAiB,+FACvB,UAAU,GACV,SAAS,GACT,eAAe,KAClB,OAAO,EAAE,kCAAE,CAAC,WAAW,CAAC,CAAC,KAAK,CAAC,EAAE,kCAAE,CAAC,eAAe,CAAC,kBAAkB,CAAC,CAAC,IAC1E;AAIF,EAAE;AAEF,SAAS,WAAW,CAAC,KAA8B;IAC/C,IAAM,KAAK,GAAG,IAAA,qCAA6B,EAAC,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC,CAAC;IACzE,OAAO,4BAAqB,KAAK,CAAE,CAAC;AACxC,CAAC;AAED,SAAS,aAAa,CAAC,IAAqB,EAAE,KAAuB,EAAE,IAAW;IAC9E,IAAM,KAAK,GAAG,0BAAW,CAAC,WAAW,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC;IACtD,IAAM,aAAa,GAAG,4BAAgB,CAAC,IAAI,CAAC,oBAAoB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC7E,iBAAM,CAAC,KAAK,CAAC,aAAa,CAAC,WAAW,EAAE,aAAa,CAAC,WAAW,EAAE,KAAK,CAAC,WAAW,CAAC,CAAC;IAEtF,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;IACvB,IAAA,cAAO,EAAC,KAAK,EAAE,aAAa,CAAC,WAAW,EAAE,KAAK,CAAC,WAAW,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC;IACpE,OAAO,0BAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AACtC,CAAC;AAED,SAAS,YAAY,CAAC,GAAmB,EAAE,IAAqB,EAAE,KAAuB,EAAE,KAAmB;IAC1G,IAAM,IAAI,GAAG,aAAa,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IACjE,IAAM,IAAI,GAAG,WAAW,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACrC,OAAO,aAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,KAAK,EAAX,CAAW,EAAE,cAAM,OAAA,CAAC,EAAD,CAAC,EAAE,cAAM,OAAA,IAAI,EAAJ,CAAI,CAAC,CAAC;AAClF,CAAC;AAED,EAAE;AAEF,SAAS,UAAU,CAAC,KAA8B;IAC9C,IAAM,KAAK,GAAG,IAAA,qCAA6B,EAAC,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC,CAAC;IACzE,OAAO,0BAAmB,KAAK,CAAE,CAAC;AACtC,CAAC;AAED,SAAS,YAAY,CAAC,IAAqB,EAAE,KAAuB,EAAE,IAAW;IAC7E,IAAM,KAAK,GAAG,0BAAW,CAAC,WAAW,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC;IACtD,IAAM,aAAa,GAAG,4BAAgB,CAAC,IAAI,CAAC,oBAAoB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC7E,iBAAM,CAAC,KAAK,CAAC,aAAa,CAAC,OAAO,EAAE,aAAa,CAAC,OAAO,EAAE,KAAK,CAAC,WAAW,CAAC,CAAC;IAE9E,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;IACvB,IAAA,oBAAc,EAAC,KAAK,EAAE,aAAa,CAAC,OAAO,EAAE,KAAK,CAAC,WAAW,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC;IACvE,OAAO,0BAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AACtC,CAAC;AAED,SAAS,WAAW,CAAC,GAAmB,EAAE,IAAqB,EAAE,KAAuB,EAAE,KAAmB;IACzG,IAAM,IAAI,GAAG,YAAY,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IAChE,IAAM,IAAI,GAAG,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACpC,OAAO,aAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,KAAK,EAAX,CAAW,EAAE,cAAM,OAAA,CAAC,EAAD,CAAC,EAAE,cAAM,OAAA,IAAI,EAAJ,CAAI,CAAC,CAAC;AAClF,CAAC;AAED,EAAE;AAEF,SAAS,gBAAgB,CAAC,KAA8B;IACpD,IAAM,KAAK,GAAG,IAAA,qCAA6B,EAAC,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC,CAAC;IACzE,OAAO,gCAAyB,KAAK,CAAE,CAAC;AAC5C,CAAC;AAED,SAAS,kBAAkB,CAAC,IAAqB,EAAE,KAAuB,EAAE,IAAW;IACnF,IAAM,KAAK,GAAG,0BAAW,CAAC,WAAW,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC;IACtD,IAAM,aAAa,GAAG,4BAAgB,CAAC,IAAI,CAAC,oBAAoB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAE7E,IAAM,IAAI,GAAG,aAAa,CAAC,OAAO,CAAC;IAC3B,IAAA,MAAM,GAAiB,IAAI,OAArB,EAAE,IAAI,GAAW,IAAI,KAAf,EAAE,IAAI,GAAK,IAAI,KAAT,CAAU;IACpC,IAAM,IAAI,GAAG,iBAAM,CAAC,IAAI,CAAC,IAAA,qBAAI,GAAE,EAAE,IAAI,CAAC,CAAC;IACvC,qBAAI,CAAC,KAAK,CAAC,IAAI,EAAE,IAAI,EAAE,GAAG,GAAG,KAAK,CAAC,WAAW,CAAC,CAAC;IAChD,IAAM,WAAW,GAAG,qBAAI,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE3D,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;IACvB,IAAA,wBAAY,EAAC,KAAK,EAAE,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,WAAW,EAAE,CAAC,CAAC,CAAC;IACxD,OAAO,0BAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AACtC,CAAC;AAED,SAAS,iBAAiB,CAAC,GAAmB,EAAE,IAAqB,EAAE,KAAuB,EAAE,KAAmB;IAC/G,IAAM,IAAI,GAAG,kBAAkB,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IACtE,IAAM,IAAI,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC1C,OAAO,aAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,KAAK,EAAX,CAAW,EAAE,cAAM,OAAA,CAAC,EAAD,CAAC,EAAE,cAAM,OAAA,IAAI,EAAJ,CAAI,CAAC,CAAC;AAClF,CAAC;AAKD,SAAgB,yBAAyB,CAAC,GAA0B,EAAE,SAAyE;IAC3I,IAAM,IAAI,GAAG,+BAAc,CAAC,WAAW,CAAC,aAAa,EAAE,GAAG,EAAE,SAAS,EAAE,+BAAc,CAAC,YAAY,EAAE,kBAAuF,CAAC,CAAC;IAC7L,IAAI,CAAC,QAAQ,CAAC,EAAE,aAAa,EAAE,6BAAa,CAAC,YAAY,EAAE,CAAC,CAAC;IAC7D,OAAO,IAAI,CAAC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package/lib/commonjs/mol-repr/shape/loci/plane.js CHANGED Viewed

@@ -28,7 +28,7 @@ exports.PlaneParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, _PlanePara
 //
 function getPlaneName(locis) {
     var label = (0, label_1.structureElementLociLabelMany)(locis, { countsOnly: true });
-    return "Best Fit Plane of " + label;
+    return "Best Fit Plane of ".concat(label);
 }
 var tmpMat = (0, linear_algebra_1.Mat4)();
 var tmpV = (0, linear_algebra_1.Vec3)();

package/lib/commonjs/mol-repr/shape/loci/plane.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"plane.js","sourceRoot":"","sources":["../../../../../src/mol-repr/shape/loci/plane.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAGH,uEAA2E;AAC3E,uDAA2D;AAC3D,oDAAwD;AACxD,uDAAyG;AACzG,kDAAiD;AACjD,4DAA2D;AAC3D,4EAA0E;AAC1E,kDAAyE;AACzE,mEAA8D;AAC9D,iEAAgE;AAChE,0DAAyD;AACzD,0DAAgE;AAChE,uDAAoD;AAMpD,IAAM,YAAY,mDACX,WAAI,CAAC,MAAM,KACd,KAAK,EAAE,kCAAE,CAAC,KAAK,CAAC,kBAAU,CAAC,MAAM,CAAC,EAClC,WAAW,EAAE,kCAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,GAC/D,CAAC;AAGF,IAAM,YAAY,GAAG;IACjB,OAAO,EAAE,UAAC,GAA0B,EAAE,SAA8D,IAAK,OAAA,IAAA,oCAAmB,EAAC,aAAa,EAAE,WAAI,CAAC,KAAK,CAAC,EAA9C,CAA8C;CAC1J,CAAC;AAEW,QAAA,WAAW,mDACjB,YAAY,KACf,OAAO,EAAE,kCAAE,CAAC,WAAW,CAAC,CAAC,OAAO,CAAC,EAAE,kCAAE,CAAC,eAAe,CAAC,YAAY,CAAC,CAAC,IACtE;AAIF,EAAE;AAEF,SAAS,YAAY,CAAC,KAA8B;IAChD,IAAM,KAAK,GAAG,IAAA,qCAA6B,EAAC,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC,CAAC;IACzE,OAAO,4BAAqB,KAAK,CAAE,CAAC;AACxC,CAAC;AAED,IAAM,MAAM,GAAG,IAAA,qBAAI,GAAE,CAAC;AACtB,IAAM,IAAI,GAAG,IAAA,qBAAI,GAAE,CAAC;AACpB,SAAS,cAAc,CAAC,IAAe,EAAE,KAAiB,EAAE,IAAW;IACnE,IAAM,KAAK,GAAG,0BAAW,CAAC,WAAW,CAAC,GAAG,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC;IACtD,IAAM,aAAa,GAAG,4BAAgB,CAAC,IAAI,CAAC,oBAAoB,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC7E,IAAM,IAAI,GAAG,aAAa,CAAC,OAAO,CAAC;IACnC,IAAM,KAAK,GAAG,IAAA,aAAK,GAAE,CAAC;IAEtB,qBAAI,CAAC,GAAG,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;IACvC,qBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;IACpD,qBAAI,CAAC,KAAK,CAAC,MAAM,EAAE,MAAM,EAAE,iBAAM,CAAC,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;IACpD,qBAAI,CAAC,cAAc,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,WAAW,CAAC,CAAC;IACvD,qBAAI,CAAC,cAAc,CAAC,MAAM,EAAE,IAAI,CAAC,MAAM,CAAC,CAAC;IAEzC,KAAK,CAAC,YAAY,GAAG,CAAC,CAAC;IACvB,0BAAW,CAAC,YAAY,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IAC/C,0BAAW,CAAC,mBAAmB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IACtD,OAAO,0BAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AACtC,CAAC;AAED,SAAS,aAAa,CAAC,GAAmB,EAAE,IAAe,EAAE,KAAiB,EAAE,KAAmB;IAC/F,IAAM,IAAI,GAAG,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,CAAC;IAClE,IAAM,IAAI,GAAG,YAAY,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACtC,OAAO,aAAK,CAAC,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,cAAM,OAAA,KAAK,CAAC,KAAK,EAAX,CAAW,EAAE,cAAM,OAAA,CAAC,EAAD,CAAC,EAAE,cAAM,OAAA,IAAI,EAAJ,CAAI,CAAC,CAAC;AAClF,CAAC;AAKD,SAAgB,mBAAmB,CAAC,GAA0B,EAAE,SAA6D;IACzH,IAAM,IAAI,GAAG,+BAAc,CAAC,WAAW,CAAC,OAAO,EAAE,GAAG,EAAE,SAAS,EAAE,+BAAc,CAAC,YAAY,EAAE,YAAqE,CAAC,CAAC;IACrK,IAAI,CAAC,QAAQ,CAAC,EAAE,aAAa,EAAE,6BAAa,CAAC,YAAY,EAAE,CAAC,CAAC;IAC7D,OAAO,IAAI,CAAC;AAChB,CAAC;AAJD,kDAIC"}

package/lib/commonjs/mol-repr/shape/representation.js CHANGED Viewed

@@ -34,6 +34,7 @@ function ShapeRepresentation(getShape, geometryUtils, builder) {
     var renderObjects = [];
     var _renderObject;
     var _shape;
+    var geometryVersion = -1;
     var _theme = theme_1.Theme.createEmpty();
     var currentProps = param_definition_1.ParamDefinition.getDefaultValues(geometryUtils.Params); // TODO avoid casting
     var currentParams;
@@ -154,6 +155,9 @@ function ShapeRepresentation(getShape, geometryUtils, builder) {
                             geometryUtils.updateRenderableState(_renderObject.state, newProps);
                         }
                         currentProps = newProps;
+                        if (updateState.createGeometry || updateState.createNew) {
+                            geometryVersion += 1;
+                        }
                         // increment version
                         updated.next(version++);
                         return [2 /*return*/];
@@ -177,6 +181,7 @@ function ShapeRepresentation(getShape, geometryUtils, builder) {
         get state() { return _state; },
         get theme() { return _theme; },
         renderObjects: renderObjects,
+        get geometryVersion() { return geometryVersion; },
         updated: updated,
         createOrUpdate: createOrUpdate,
         getLoci: function (pickingId) {

package/lib/commonjs/mol-repr/shape/representation.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/commonjs/mol-repr/structure/complex-representation.js CHANGED Viewed

@@ -10,6 +10,7 @@ exports.ComplexRepresentation = void 0;
 var tslib_1 = require("tslib");
 var param_definition_1 = require("../../mol-util/param-definition");
 var representation_1 = require("./representation");
+var representation_2 = require("../representation");
 var structure_1 = require("../../mol-model/structure");
 var rxjs_1 = require("rxjs");
 var render_object_1 = require("../../mol-gl/render-object");
@@ -24,6 +25,7 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
     var version = 0;
     var webgl = ctx.webgl;
     var updated = new rxjs_1.Subject();
+    var geometryState = new representation_2.Representation.GeometryState();
     var materialId = (0, render_object_1.getNextMaterialId)();
     var renderObjects = [];
     var _state = representation_1.StructureRepresentationStateBuilder.create();
@@ -69,10 +71,14 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
                             setState(_state); // current state for new visual
                         // update list of renderObjects
                         renderObjects.length = 0;
-                        if (visual && visual.renderObject)
+                        if (visual && visual.renderObject) {
                             renderObjects.push(visual.renderObject);
+                            geometryState.add(visual.renderObject.id, visual.geometryVersion);
+                        }
+                        geometryState.snapshot();
                         // increment version
-                        updated.next(version++);
+                        version += 1;
+                        updated.next(version);
                         return [2 /*return*/];
                 }
             });
@@ -118,12 +124,12 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
         if (state.overpaint !== undefined && visual) {
             // Remap loci from equivalent structure to the current structure
             var remappedOverpaint = overpaint_1.Overpaint.remap(state.overpaint, _structure);
-            visual.setOverpaint(remappedOverpaint);
+            visual.setOverpaint(remappedOverpaint, webgl);
         }
         if (state.transparency !== undefined && visual) {
             // Remap loci from equivalent structure to the current structure
             var remappedTransparency = transparency_1.Transparency.remap(state.transparency, _structure);
-            visual.setTransparency(remappedTransparency);
+            visual.setTransparency(remappedTransparency, webgl);
         }
         if (state.clipping !== undefined && visual) {
             // Remap loci from equivalent structure to the current structure
@@ -155,6 +161,7 @@ function ComplexRepresentation(label, ctx, getParams, visualCtor) {
         get params() { return _params; },
         get state() { return _state; },
         get theme() { return _theme; },
+        get geometryVersion() { return geometryState.version; },
         renderObjects: renderObjects,
         updated: updated,
         createOrUpdate: createOrUpdate,

package/lib/commonjs/mol-repr/structure/complex-representation.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/commonjs/mol-repr/structure/complex-visual.d.ts CHANGED Viewed

@@ -40,7 +40,7 @@ interface ComplexVisualGeometryBuilder<P extends StructureParams, G extends Geom
 }
 export declare function ComplexVisual<G extends Geometry, P extends StructureParams & Geometry.Params<G>>(builder: ComplexVisualGeometryBuilder<P, G>, materialId: number): ComplexVisual<P>;
 export declare const ComplexMeshParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -55,7 +55,7 @@ export interface ComplexMeshVisualBuilder<P extends ComplexMeshParams> extends C
 }
 export declare function ComplexMeshVisual<P extends ComplexMeshParams>(builder: ComplexMeshVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexCylindersParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     sizeAspectRatio: PD.Numeric;
@@ -70,7 +70,7 @@ export interface ComplexCylindersVisualBuilder<P extends ComplexCylindersParams>
 }
 export declare function ComplexCylindersVisual<P extends ComplexCylindersParams>(builder: ComplexCylindersVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexLinesParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     lineSizeAttenuation: PD.BooleanParam;
@@ -82,7 +82,7 @@ export interface ComplexLinesVisualBuilder<P extends ComplexLinesParams> extends
 }
 export declare function ComplexLinesVisual<P extends ComplexLinesParams>(builder: ComplexLinesVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexTextParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     sizeFactor: PD.Numeric;
     borderWidth: PD.Numeric;
@@ -111,7 +111,7 @@ export interface ComplexTextVisualBuilder<P extends ComplexTextParams> extends C
 }
 export declare function ComplexTextVisual<P extends ComplexTextParams>(builder: ComplexTextVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexDirectVolumeParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;
@@ -144,7 +144,7 @@ export interface ComplexDirectVolumeVisualBuilder<P extends ComplexDirectVolumeP
 }
 export declare function ComplexDirectVolumeVisual<P extends ComplexDirectVolumeParams>(builder: ComplexDirectVolumeVisualBuilder<P>, materialId: number): ComplexVisual<P>;
 export declare const ComplexTextureMeshParams: {
-    unitKinds: PD.MultiSelect<"spheres" | "atomic" | "gaussians">;
+    unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
     includeParent: PD.BooleanParam;
     doubleSided: PD.BooleanParam;
     flipSided: PD.BooleanParam;

package/lib/commonjs/mol-repr/structure/complex-visual.js CHANGED Viewed

@@ -51,6 +51,7 @@ function ComplexVisual(builder, materialId) {
     var currentTheme = theme_1.Theme.createEmpty();
     var currentStructure;
     var geometry;
+    var geometryVersion = -1;
     var locationIt;
     var positionIt;
     function prepareUpdate(theme, props, structure) {
@@ -141,8 +142,10 @@ function ComplexVisual(builder, materialId) {
         currentProps = newProps;
         currentTheme = newTheme;
         currentStructure = newStructure;
-        if (newGeometry)
+        if (newGeometry) {
             geometry = newGeometry;
+            geometryVersion += 1;
+        }
     }
     function lociIsSuperset(loci) {
         if ((0, loci_1.isEveryLoci)(loci))
@@ -171,6 +174,7 @@ function ComplexVisual(builder, materialId) {
     return {
         get groupCount() { return locationIt ? locationIt.count : 0; },
         get renderObject() { return locationIt && locationIt.count ? renderObject : undefined; },
+        get geometryVersion() { return geometryVersion; },
         createOrUpdate: function (ctx, theme, props, structure) {
             if (props === void 0) { props = {}; }
             prepareUpdate(theme, props, structure || currentStructure);
@@ -210,11 +214,13 @@ function ComplexVisual(builder, materialId) {
         setTransform: function (matrix, instanceMatrices) {
             visual_1.Visual.setTransform(renderObject, matrix, instanceMatrices);
         },
-        setOverpaint: function (overpaint) {
-            visual_1.Visual.setOverpaint(renderObject, overpaint, lociApply, true);
+        setOverpaint: function (overpaint, webgl) {
+            var smoothing = { geometry: geometry, props: currentProps, webgl: webgl };
+            visual_1.Visual.setOverpaint(renderObject, overpaint, lociApply, true, smoothing);
         },
-        setTransparency: function (transparency) {
-            visual_1.Visual.setTransparency(renderObject, transparency, lociApply, true);
+        setTransparency: function (transparency, webgl) {
+            var smoothing = { geometry: geometry, props: currentProps, webgl: webgl };
+            visual_1.Visual.setTransparency(renderObject, transparency, lociApply, true, smoothing);
         },
         setClipping: function (clipping) {
             visual_1.Visual.setClipping(renderObject, clipping, lociApply, true);