molstar 2.3.6 → 2.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/index.d.ts +1 -1
- package/lib/apps/viewer/index.js +3 -3
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +20 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/viewer/index.d.ts +8 -8
- package/lib/commonjs/apps/viewer/index.js +3 -3
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +20 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/model.js +15 -15
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/state.js +5 -5
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.js +4 -4
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +3 -3
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +28 -18
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +31 -2
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js +87 -15
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +27 -18
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/ui.js +24 -20
- package/lib/commonjs/extensions/geo-export/ui.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.d.ts +1 -0
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +31 -21
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +2 -2
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/ui.js +7 -6
- package/lib/commonjs/extensions/mp4-export/ui.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +22 -21
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -5
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
- package/lib/commonjs/mol-canvas3d/canvas3d.js +3 -3
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/draw.js +3 -11
- package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +13 -1
- package/lib/commonjs/mol-geo/geometry/base.js +37 -2
- package/lib/commonjs/mol-geo/geometry/base.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +9 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +154 -35
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +0 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +7 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +162 -27
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +3 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.d.ts +7 -2
- package/lib/commonjs/mol-geo/geometry/transparency-data.js +10 -1
- package/lib/commonjs/mol-geo/geometry/transparency-data.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +4 -4
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +1 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -3
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/util.d.ts +25 -6
- package/lib/commonjs/mol-gl/compute/util.js +76 -21
- package/lib/commonjs/mol-gl/compute/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/image.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/lines.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/mesh.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/points.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/schema.d.ts +16 -0
- package/lib/commonjs/mol-gl/renderable/schema.js +8 -0
- package/lib/commonjs/mol-gl/renderable/schema.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/spheres.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/text.d.ts +8 -0
- package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +22 -13
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js +1 -1
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
- package/lib/commonjs/mol-gl/renderer.js +3 -0
- package/lib/commonjs/mol-gl/renderer.js.map +1 -1
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-color-varying.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/accumulate.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/compute/color-smoothing/normalize.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
- package/lib/commonjs/mol-gl/shader/direct-volume.frag.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/mesh.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +2 -2
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +2 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +2 -2
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/shader.js +3 -3
- package/lib/commonjs/mol-gl/webgl/shader.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/state.d.ts +4 -1
- package/lib/commonjs/mol-gl/webgl/state.js +25 -1
- package/lib/commonjs/mol-gl/webgl/state.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/texture.js +2 -2
- package/lib/commonjs/mol-gl/webgl/texture.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/uniform.js +2 -2
- package/lib/commonjs/mol-gl/webgl/uniform.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/vertex-array.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js +9 -2
- package/lib/commonjs/mol-gl/webgl/vertex-array.js.map +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js +1 -1
- package/lib/commonjs/mol-io/common/file-handle.js.map +1 -1
- package/lib/commonjs/mol-io/common/typed-array.d.ts +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js +1 -1
- package/lib/commonjs/mol-io/common/typed-array.js.map +1 -1
- package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js +51 -0
- package/lib/commonjs/mol-io/reader/_spec/sdf.spec.js.map +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/ccp4/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/data-model.js +7 -7
- package/lib/commonjs/mol-io/reader/cif/data-model.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.d.ts +8 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js +15 -5
- package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js.map +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +4 -4
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema.js +7 -7
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- package/lib/servers/model/server/structure-wrapper.js +6 -6
- package/lib/servers/model/server/structure-wrapper.js.map +1 -1
- package/lib/servers/model/server.js +3 -3
- package/lib/servers/model/server.js.map +1 -1
- package/lib/servers/model/utils/fetch-props-pdbe.js +4 -4
- package/lib/servers/model/utils/fetch-props-pdbe.js.map +1 -1
- package/lib/servers/model/utils/writer.js +2 -2
- package/lib/servers/model/utils/writer.js.map +1 -1
- package/lib/servers/plugin-state/api-schema.js +2 -2
- package/lib/servers/plugin-state/api-schema.js.map +1 -1
- package/lib/servers/plugin-state/index.js +1 -1
- package/lib/servers/plugin-state/index.js.map +1 -1
- package/lib/servers/volume/pack/format/dsn6.js +1 -1
- package/lib/servers/volume/pack/format/dsn6.js.map +1 -1
- package/lib/servers/volume/pack/main.js +4 -4
- package/lib/servers/volume/pack/main.js.map +1 -1
- package/lib/servers/volume/pack/writer.js +1 -1
- package/lib/servers/volume/pack/writer.js.map +1 -1
- package/lib/servers/volume/pack.js +1 -1
- package/lib/servers/volume/pack.js.map +1 -1
- package/lib/servers/volume/server/api.js +7 -7
- package/lib/servers/volume/server/api.js.map +1 -1
- package/lib/servers/volume/server/local-api.js +1 -1
- package/lib/servers/volume/server/local-api.js.map +1 -1
- package/lib/servers/volume/server/query/encode.js +3 -3
- package/lib/servers/volume/server/query/encode.js.map +1 -1
- package/lib/servers/volume/server/query/execute.js +5 -5
- package/lib/servers/volume/server/query/execute.js.map +1 -1
- package/lib/servers/volume/server/version.js +1 -1
- package/lib/servers/volume/server/version.js.map +1 -1
- package/lib/servers/volume/server/web-api.js +7 -7
- package/lib/servers/volume/server/web-api.js.map +1 -1
- package/lib/servers/volume/server/web-schema.js +6 -6
- package/lib/servers/volume/server/web-schema.js.map +1 -1
- package/lib/servers/volume/server.js +2 -2
- package/lib/servers/volume/server.js.map +1 -1
- package/lib/tests/browser/font-atlas.js +1 -1
- package/lib/tests/browser/font-atlas.js.map +1 -1
- package/lib/tests/browser/render-shape.js +1 -1
- package/lib/tests/browser/render-shape.js.map +1 -1
- package/lib/tests/browser/render-structure.js +1 -1
- package/lib/tests/browser/render-structure.js.map +1 -1
- package/lib/tsconfig.commonjs.tsbuildinfo +1 -1
- package/package.json +29 -30
- package/CHANGELOG.md +0 -191
|
@@ -82,8 +82,8 @@ function hydrophobicRefiner(structure, interactions) {
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82
82
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var elementB = infoB.members[infoB.offsets[infoB.feature]];
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|
83
83
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var residueA = infoA.unit.getResidueIndex(elementA);
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84
84
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var residueB = infoB.unit.getResidueIndex(elementB);
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|
85
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-
var keyA = elementA
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|
86
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-
var keyB = elementB
|
|
85
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+
var keyA = "".concat(elementA, "|").concat(infoA.unit.id, "|").concat(residueB, "|").concat(infoB.unit.id, "|A");
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86
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+
var keyB = "".concat(elementB, "|").concat(infoB.unit.id, "|").concat(residueA, "|").concat(infoA.unit.id, "|B");
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87
87
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var dist = Features.distance(infoA, infoB);
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88
88
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handleResidueContact(dist, edge, keyA, map, set);
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89
89
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handleResidueContact(dist, edge, keyB, map, set);
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@@ -1 +1 @@
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1
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-
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1
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+
{"version":3,"file":"refine.js","sourceRoot":"","sources":["../../../../src/mol-model-props/computed/interactions/refine.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAIH,OAAO,EAAE,IAAI,EAAa,MAAM,8BAA8B,CAAC;AAC/D,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AAStC,MAAM,UAAU,kBAAkB,CAAC,SAAoB,EAAE,YAA0B;IACvE,IAAA,QAAQ,GAAmC,YAAY,SAA/C,EAAE,aAAa,GAAoB,YAAY,cAAhC,EAAE,aAAa,GAAK,YAAY,cAAjB,CAAkB;IAEhE,IAAM,eAAe,GAAqB;QACtC,kBAAkB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC3C,wBAAwB,CAAC,SAAS,EAAE,YAAY,CAAC;QACjD,iBAAiB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC1C,iBAAiB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC1C,wBAAwB,CAAC,SAAS,EAAE,YAAY,CAAC;KACpD,CAAC;IAEF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,QAAQ,CAAC,SAAS,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;QAClD,IAAM,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;QACzD,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;QAEzD,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,EAAE,EAAE,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;QACvE,KAAK,CAAC,OAAO,GAAG,CAAC,CAAC,MAAM,CAAC;QACzB,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,EAAE,EAAE,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;QACvE,KAAK,CAAC,OAAO,GAAG,CAAC,CAAC,MAAM,CAAC;QAEzB,KAAsB,UAAe,EAAf,mCAAe,EAAf,6BAAe,EAAf,IAAe,EAAE;YAAlC,IAAM,OAAO,wBAAA;YACd,IAAI,OAAO,CAAC,YAAY,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC;gBAAE,OAAO,CAAC,kBAAkB,CAAC,CAAC,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;SACvF;KACJ;IAED,EAAE;IAEF,IAAM,MAAM,GAAG,aAAa,CAAC,IAAI,EAAE,CAAC;IAEpC,OAAO,IAAI,EAAE;QACH,IAAA,KAAkB,MAAM,CAAC,IAAI,EAAE,EAA7B,IAAI,UAAA,EAAE,KAAK,WAAkB,CAAC;QACtC,IAAI,IAAI;YAAE,MAAM;QAEhB,IAAM,UAAQ,GAAG,aAAa,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAM,QAAQ,GAAG,aAAa,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAM,IAAI,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;YAAE,SAAS;QAEnC,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,QAAQ,CAAC,CAAC;QACvD,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,QAAQ,CAAC,CAAC;QAEvD,KAAsB,UAAe,EAAf,mCAAe,EAAf,6BAAe,EAAf,IAAe;YAAhC,IAAM,OAAO,wBAAA;YAAqB,OAAO,CAAC,SAAS,CAAC,IAAI,EAAE,UAAQ,EAAE,QAAQ,CAAC,CAAC;SAAA;QAEnF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,UAAQ,CAAC,SAAS,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;YACtD,KAAK,CAAC,OAAO,GAAG,UAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YAC9B,KAAK,CAAC,OAAO,GAAG,UAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YAC9B,+CAA+C;YAE/C,KAAsB,UAAe,EAAf,mCAAe,EAAf,6BAAe,EAAf,IAAe,EAAE;gBAAlC,IAAM,OAAO,wBAAA;gBACd,IAAI,OAAO,CAAC,YAAY,CAAC,UAAQ,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAAE,OAAO,CAAC,kBAAkB,CAAC,CAAC,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;aACrG;SACJ;KACJ;AACL,CAAC;AAED;;;GAGG;AACH,SAAS,kBAAkB,CAAC,SAAoB,EAAE,YAA0B;IAChE,IAAA,QAAQ,GAAK,YAAY,SAAjB,CAAkB;IAElC,gDAAgD;IAChD,IAAM,oBAAoB,GAAG,UAAU,IAAY,EAAE,IAAY,EAAE,GAAW,EAAE,GAAkC,EAAE,GAAwB;QAClI,IAAA,KAAsB,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC,EAAnD,OAAO,QAAA,EAAE,QAAQ,QAAkC,CAAC;QAC3D,IAAI,IAAI,GAAG,OAAO,EAAE;YAChB,IAAI,QAAQ,KAAK,CAAC,CAAC;gBAAE,GAAG,CAAC,QAAQ,CAAC,CAAC;YACnC,GAAG,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;SAC9B;aAAM;YACH,GAAG,CAAC,IAAI,CAAC,CAAC;SACb;IACL,CAAC,CAAC;IAEF,SAAS,UAAU,CAAC,IAAY,EAAE,KAAoB,EAAE,KAAoB,EAAE,GAAkC,EAAE,GAAwB;QACtI,IAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC7D,IAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC7D,IAAM,QAAQ,GAAG,KAAK,CAAC,IAAI,CAAC,eAAe,CAAC,QAAQ,CAAC,CAAC;QACtD,IAAM,QAAQ,GAAG,KAAK,CAAC,IAAI,CAAC,eAAe,CAAC,QAAQ,CAAC,CAAC;QAEtD,IAAM,IAAI,GAAG,UAAG,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,cAAI,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,OAAI,CAAC;QAC3E,IAAM,IAAI,GAAG,UAAG,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,cAAI,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,OAAI,CAAC;QAE3E,IAAM,IAAI,GAAG,QAAQ,CAAC,QAAQ,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;QAE7C,oBAAoB,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC;QACjD,oBAAoB,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC;IACrD,CAAC;IAED,IAAM,eAAe,GAAG,IAAI,GAAG,EAA4B,CAAC;IAC5D,IAAM,gBAAgB,GAAG,UAAC,CAAS,IAAK,OAAA,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,mBAA2B,EAAvD,CAAuD,CAAC;IAEhG,IAAI,eAA8C,CAAC;IACnD,IAAI,gBAAqC,CAAC;IAE1C,OAAO;QACH,YAAY,EAAE,UAAC,IAAqB,IAAK,OAAA,IAAI,wBAAgC,EAApC,CAAoC;QAC7E,kBAAkB,EAAE,UAAC,KAAa,EAAE,KAAoB,EAAE,KAAoB;YAC1E,UAAU,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,eAAe,EAAE,gBAAgB,CAAC,CAAC;QACvE,CAAC;QACD,SAAS,EAAE,UAAC,IAAiB,EAAE,QAAmC,EAAE,QAAkB;YAClF,eAAe,GAAG,IAAI,GAAG,EAA4B,CAAC;YACtD,gBAAgB,GAAG,UAAC,CAAS,IAAK,OAAA,QAAQ,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,mBAA2B,EAArD,CAAqD,CAAC;QAC5F,CAAC;QACD,kBAAkB,EAAE,UAAC,KAAa,EAAE,KAAoB,EAAE,KAAoB;YAC1E,UAAU,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,eAAe,EAAE,gBAAgB,CAAC,CAAC;QACvE,CAAC;KACJ,CAAC;AACN,CAAC;AAED;;;GAGG;AACH,SAAS,wBAAwB,CAAC,SAAoB,EAAE,YAA0B;IACtE,IAAA,QAAQ,GAAK,YAAY,SAAjB,CAAkB;IAElC,IAAM,eAAe,GAAG,UAAC,KAAoB,EAAE,KAAoB;QAC/D,IAAM,GAAG,GAAG,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC,8BAAkC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC;QAEzF,cAAc;QACd,IAAM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@@ -19,7 +19,7 @@ export declare const InteractionsInterUnitParams: {
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19
19
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dashCap: PD.BooleanParam;
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20
20
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stubCap: PD.BooleanParam;
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21
21
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radialSegments: PD.Numeric;
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22
|
-
unitKinds: PD.MultiSelect<"
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22
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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23
23
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doubleSided: PD.BooleanParam;
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24
24
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flipSided: PD.BooleanParam;
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25
25
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flatShaded: PD.BooleanParam;
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@@ -19,7 +19,7 @@ export declare const InteractionsIntraUnitParams: {
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19
19
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dashCap: PD.BooleanParam;
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20
20
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stubCap: PD.BooleanParam;
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21
21
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radialSegments: PD.Numeric;
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22
|
-
unitKinds: PD.MultiSelect<"
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22
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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23
23
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doubleSided: PD.BooleanParam;
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24
24
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flipSided: PD.BooleanParam;
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25
25
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flatShaded: PD.BooleanParam;
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@@ -9,7 +9,7 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
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9
9
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import { Structure } from '../../../mol-model/structure';
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10
10
|
import { StructureRepresentation, StructureRepresentationProvider } from '../../../mol-repr/structure/representation';
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11
11
|
export declare const InteractionsParams: {
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|
12
|
-
unitKinds: PD.MultiSelect<"
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12
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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13
13
|
sizeFactor: PD.Numeric;
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14
14
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visuals: PD.MultiSelect<"intra-unit" | "inter-unit">;
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15
15
|
dashCount: PD.Numeric;
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@@ -34,7 +34,7 @@ export declare const InteractionsParams: {
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|
34
34
|
};
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35
35
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export declare type InteractionsParams = typeof InteractionsParams;
|
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36
36
|
export declare function getInteractionParams(ctx: ThemeRegistryContext, structure: Structure): {
|
|
37
|
-
unitKinds: PD.MultiSelect<"
|
|
37
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
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38
38
|
sizeFactor: PD.Numeric;
|
|
39
39
|
visuals: PD.MultiSelect<"intra-unit" | "inter-unit">;
|
|
40
40
|
dashCount: PD.Numeric;
|
|
@@ -60,7 +60,7 @@ export declare function getInteractionParams(ctx: ThemeRegistryContext, structur
|
|
|
60
60
|
export declare type InteractionRepresentation = StructureRepresentation<InteractionsParams>;
|
|
61
61
|
export declare function InteractionRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, InteractionsParams>): InteractionRepresentation;
|
|
62
62
|
export declare const InteractionsRepresentationProvider: StructureRepresentationProvider<{
|
|
63
|
-
unitKinds: PD.MultiSelect<"
|
|
63
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
64
64
|
sizeFactor: PD.Numeric;
|
|
65
65
|
visuals: PD.MultiSelect<"intra-unit" | "inter-unit">;
|
|
66
66
|
dashCount: PD.Numeric;
|
|
@@ -64,7 +64,7 @@ var CrossLinkRestraint;
|
|
|
64
64
|
CrossLinkRestraint.areLocationsEqual = areLocationsEqual;
|
|
65
65
|
function _label(crossLinkRestraints, element) {
|
|
66
66
|
var p = crossLinkRestraints.pairs[element];
|
|
67
|
-
return "Cross Link Restraint | Type: "
|
|
67
|
+
return "Cross Link Restraint | Type: ".concat(p.restraintType, " | Threshold: ").concat(p.distanceThreshold, " \u212B | Psi: ").concat(p.psi, " | Sigma 1: ").concat(p.sigma1, " | Sigma 2: ").concat(p.sigma2, " | Distance: ").concat(distance(p).toFixed(2), " \u212B");
|
|
68
68
|
}
|
|
69
69
|
function locationLabel(location) {
|
|
70
70
|
return _label(location.data.crossLinkRestraints, location.element);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"property.js","sourceRoot":"","sources":["../../../../src/mol-model-props/integrative/cross-link-restraint/property.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,uBAAuB,EAAE,MAAM,UAAU,CAAC;AACnD,OAAO,EAAqC,IAAI,EAAE,MAAM,8BAA8B,CAAC;AACvF,OAAO,EAAE,cAAc,EAAiB,MAAM,oBAAoB,CAAC;AACnE,OAAO,EAAE,uBAAuB,EAAE,MAAM,wCAAwC,CAAC;AAEjF,OAAO,EAAE,YAAY,EAAE,MAAM,6BAA6B,CAAC;AAC3D,OAAO,EAAE,QAAQ,EAAE,MAAM,yBAAyB,CAAC;AAEnD,OAAO,EAAE,cAAc,EAAE,MAAM,4CAA4C,CAAC;AAC5E,OAAO,EAAE,SAAS,EAAE,MAAM,0BAA0B,CAAC;AACrD,OAAO,EAAE,IAAI,EAAE,MAAM,kCAAkC,CAAC;AACxD,OAAO,EAAE,wBAAwB,EAAE,MAAM,oCAAoC,CAAC;AAI9E,MAAM,CAAC,IAAM,0BAA0B,GAAkE,uBAAuB,CAAC,cAAc,CAAC;IAC5I,KAAK,EAAE,sBAAsB;IAC7B,UAAU,EAAE,wBAAwB,CAAC;QACjC,IAAI,EAAE,kCAAkC;QACxC,gCAAgC;KACnC,CAAC;IACF,IAAI,EAAE,OAAO;IACb,aAAa,EAAE,EAAE;IACjB,SAAS,EAAE,UAAC,IAAe,IAAK,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;IACpC,YAAY,EAAE,UAAC,IAAe,IAAK,OAAA,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAzC,CAAyC,CAAC,EAAhE,CAAgE;IACnG,MAAM,EAAE,UAAO,GAA2B,EAAE,IAAe,EAAE,KAAkB;;YAC3E,sBAAO,EAAE,KAAK,EAAE,0BAA0B,CAAC,IAAI,CAAC,EAAE,EAAC;;SACtD;CACJ,CAAC,CAAC;AAEH,OAAO,EAAE,kBAAkB,EAAE,CAAC;AAU9B,IAAU,kBAAkB,CA2E3B;AA3ED,WAAU,kBAAkB;IACxB,IAAY,GAEX;IAFD,WAAY,GAAG;QACX,kDAA2C,CAAA;IAC/C,CAAC,EAFW,GAAG,GAAH,sBAAG,KAAH,sBAAG,QAEd;IAED,SAAgB,YAAY,CAAC,SAAoB;QAC7C,OAAO,SAAS,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAzC,CAAyC,CAAC,CAAC;IACjF,CAAC;IAFe,+BAAY,eAE3B,CAAA;IAED,IAAM,QAAQ,GAAG,IAAI,EAAE,EAAE,QAAQ,GAAG,IAAI,EAAE,CAAC;IAC3C,SAAgB,QAAQ,CAAC,IAAwB;QAC7C,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,QAAQ,CAAC,CAAC;QAC7E,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,QAAQ,CAAC,CAAC;QAC7E,OAAO,IAAI,CAAC,QAAQ,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;IAC7C,CAAC;IAJe,2BAAQ,WAIvB,CAAA;IAOD,SAAgB,QAAQ,CAAC,mBAA4C,EAAE,SAAoB,EAAE,KAAc;QACvG,OAAO,YAAY,CAAC,uBAAuB,EAAE,EAAE,SAAS,WAAA,EAAE,mBAAmB,qBAAA,EAAE,EAAE,KAAY,CAAC,CAAC;IACnG,CAAC;IAFe,2BAAQ,WAEvB,CAAA;IAED,SAAgB,UAAU,CAAC,CAAM;QAC7B,OAAO,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,KAAK,eAAe,IAAI,CAAC,CAAC,GAAG,KAAK,uBAAuB,CAAC;IAClF,CAAC;IAFe,6BAAU,aAEzB,CAAA;IAED,SAAgB,iBAAiB,CAAC,IAAc,EAAE,IAAc;QAC5D,OAAO,CACH,IAAI,CAAC,IAAI,CAAC,SAAS,KAAK,IAAI,CAAC,IAAI,CAAC,SAAS;YAC3C,IAAI,CAAC,IAAI,CAAC,mBAAmB,KAAK,IAAI,CAAC,IAAI,CAAC,mBAAmB;YAC/D,IAAI,CAAC,OAAO,KAAK,IAAI,CAAC,OAAO,CAChC,CAAC;IACN,CAAC;IANe,oCAAiB,oBAMhC,CAAA;IAED,SAAS,MAAM,CAAC,mBAA4C,EAAE,OAAgB;QAC1E,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC7C,OAAO,
|
|
1
|
+
{"version":3,"file":"property.js","sourceRoot":"","sources":["../../../../src/mol-model-props/integrative/cross-link-restraint/property.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,uBAAuB,EAAE,MAAM,UAAU,CAAC;AACnD,OAAO,EAAqC,IAAI,EAAE,MAAM,8BAA8B,CAAC;AACvF,OAAO,EAAE,cAAc,EAAiB,MAAM,oBAAoB,CAAC;AACnE,OAAO,EAAE,uBAAuB,EAAE,MAAM,wCAAwC,CAAC;AAEjF,OAAO,EAAE,YAAY,EAAE,MAAM,6BAA6B,CAAC;AAC3D,OAAO,EAAE,QAAQ,EAAE,MAAM,yBAAyB,CAAC;AAEnD,OAAO,EAAE,cAAc,EAAE,MAAM,4CAA4C,CAAC;AAC5E,OAAO,EAAE,SAAS,EAAE,MAAM,0BAA0B,CAAC;AACrD,OAAO,EAAE,IAAI,EAAE,MAAM,kCAAkC,CAAC;AACxD,OAAO,EAAE,wBAAwB,EAAE,MAAM,oCAAoC,CAAC;AAI9E,MAAM,CAAC,IAAM,0BAA0B,GAAkE,uBAAuB,CAAC,cAAc,CAAC;IAC5I,KAAK,EAAE,sBAAsB;IAC7B,UAAU,EAAE,wBAAwB,CAAC;QACjC,IAAI,EAAE,kCAAkC;QACxC,gCAAgC;KACnC,CAAC;IACF,IAAI,EAAE,OAAO;IACb,aAAa,EAAE,EAAE;IACjB,SAAS,EAAE,UAAC,IAAe,IAAK,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;IACpC,YAAY,EAAE,UAAC,IAAe,IAAK,OAAA,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAzC,CAAyC,CAAC,EAAhE,CAAgE;IACnG,MAAM,EAAE,UAAO,GAA2B,EAAE,IAAe,EAAE,KAAkB;;YAC3E,sBAAO,EAAE,KAAK,EAAE,0BAA0B,CAAC,IAAI,CAAC,EAAE,EAAC;;SACtD;CACJ,CAAC,CAAC;AAEH,OAAO,EAAE,kBAAkB,EAAE,CAAC;AAU9B,IAAU,kBAAkB,CA2E3B;AA3ED,WAAU,kBAAkB;IACxB,IAAY,GAEX;IAFD,WAAY,GAAG;QACX,kDAA2C,CAAA;IAC/C,CAAC,EAFW,GAAG,GAAH,sBAAG,KAAH,sBAAG,QAEd;IAED,SAAgB,YAAY,CAAC,SAAoB;QAC7C,OAAO,SAAS,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAzC,CAAyC,CAAC,CAAC;IACjF,CAAC;IAFe,+BAAY,eAE3B,CAAA;IAED,IAAM,QAAQ,GAAG,IAAI,EAAE,EAAE,QAAQ,GAAG,IAAI,EAAE,CAAC;IAC3C,SAAgB,QAAQ,CAAC,IAAwB;QAC7C,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,QAAQ,CAAC,CAAC;QAC7E,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,QAAQ,CAAC,CAAC;QAC7E,OAAO,IAAI,CAAC,QAAQ,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;IAC7C,CAAC;IAJe,2BAAQ,WAIvB,CAAA;IAOD,SAAgB,QAAQ,CAAC,mBAA4C,EAAE,SAAoB,EAAE,KAAc;QACvG,OAAO,YAAY,CAAC,uBAAuB,EAAE,EAAE,SAAS,WAAA,EAAE,mBAAmB,qBAAA,EAAE,EAAE,KAAY,CAAC,CAAC;IACnG,CAAC;IAFe,2BAAQ,WAEvB,CAAA;IAED,SAAgB,UAAU,CAAC,CAAM;QAC7B,OAAO,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,KAAK,eAAe,IAAI,CAAC,CAAC,GAAG,KAAK,uBAAuB,CAAC;IAClF,CAAC;IAFe,6BAAU,aAEzB,CAAA;IAED,SAAgB,iBAAiB,CAAC,IAAc,EAAE,IAAc;QAC5D,OAAO,CACH,IAAI,CAAC,IAAI,CAAC,SAAS,KAAK,IAAI,CAAC,IAAI,CAAC,SAAS;YAC3C,IAAI,CAAC,IAAI,CAAC,mBAAmB,KAAK,IAAI,CAAC,IAAI,CAAC,mBAAmB;YAC/D,IAAI,CAAC,OAAO,KAAK,IAAI,CAAC,OAAO,CAChC,CAAC;IACN,CAAC;IANe,oCAAiB,oBAMhC,CAAA;IAED,SAAS,MAAM,CAAC,mBAA4C,EAAE,OAAgB;QAC1E,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC7C,OAAO,uCAAgC,CAAC,CAAC,aAAa,2BAAiB,CAAC,CAAC,iBAAiB,4BAAkB,CAAC,CAAC,GAAG,yBAAe,CAAC,CAAC,MAAM,yBAAe,CAAC,CAAC,MAAM,0BAAgB,QAAQ,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,YAAS,CAAC;IACnN,CAAC;IAED,SAAgB,aAAa,CAAC,QAAkB;QAC5C,OAAO,MAAM,CAAC,QAAQ,CAAC,IAAI,CAAC,mBAAmB,EAAE,QAAQ,CAAC,OAAO,CAAC,CAAC;IACvE,CAAC;IAFe,gCAAa,gBAE5B,CAAA;IAID,SAAgB,IAAI,CAAC,SAAoB,EAAE,mBAA4C,EAAE,QAAgC;QACrH,OAAO,QAAQ,CAAC,uBAAuB,EAAE,EAAE,SAAS,WAAA,EAAE,mBAAmB,qBAAA,EAAE,EAAE,QAAQ,EACjF,UAAC,cAAc,IAAK,OAAA,iBAAiB,CAAC,mBAAmB,EAAE,QAAQ,EAAE,cAAc,CAAC,EAAhE,CAAgE,EACpF,cAAM,OAAA,QAAQ,CAAC,SAAS,EAAE,mBAAmB,EAAE,QAAQ,CAAC,EAAlD,CAAkD,CAAC,CAAC;IAClE,CAAC;IAJe,uBAAI,OAInB,CAAA;IAED,SAAgB,MAAM,CAAC,CAAM;QACzB,OAAO,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,KAAK,WAAW,IAAI,CAAC,CAAC,GAAG,KAAK,cAAc,CAAC;IACrE,CAAC;IAFe,yBAAM,SAErB,CAAA;IAED,SAAgB,iBAAiB,CAAC,mBAA4C,EAAE,QAAgC,EAAE,cAAwB;QACtI,OAAO,cAAc,CAAC,gBAAgB,CAAC,QAAQ,CAAC,MAAM,EAAE,UAAC,CAAC,EAAE,EAAE,EAAE,EAAE;YAC9D,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;YACjD,CAAC,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC,CAAC;YAC9D,CAAC,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC,CAAC;QAClE,CAAC,EAAE,cAAc,CAAC,CAAC;IACvB,CAAC;IANe,oCAAiB,oBAMhC,CAAA;IAED,SAAgB,QAAQ,CAAC,SAAoB,EAAE,mBAA4C,EAAE,QAAgC;QACzH,IAAM,OAAO,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAI,OAAO,KAAK,SAAS;YAAE,OAAO,EAAE,CAAC;QACrC,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC7C,OAAO;YACH,MAAM,CAAC,mBAAmB,EAAE,OAAO,CAAC;YACpC,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,SAAS,EAAE,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC;SACvF,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IACpB,CAAC;IARe,2BAAQ,WAQvB,CAAA;AACL,CAAC,EA3ES,kBAAkB,KAAlB,kBAAkB,QA2E3B;AAED,EAAE;AAEF,SAAS,cAAc,CAAC,GAAwB,EAAE,IAAU,EAAE,UAAmC;IACrF,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;IAC1B,IAAM,YAAY,GAAG,QAAQ,CAAC,MAAM,CAAC;IACrC,IAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC;4BAEd,CAAC;QACN,IAAM,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QACtB,UAAU,CAAC,mBAAmB,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,OAAO,CAAC,UAAA,EAAE,IAAI,OAAA,GAAG,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAAC,EAAd,CAAc,CAAC,CAAC;;IAF1E,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,EAAE,CAAC,EAAE;gBAA5B,CAAC;KAGT;AACL,CAAC;AAED,SAAS,YAAY,CAAC,KAA2B,EAAE,KAAW,EAAE,KAAW;IACvE,IAAI,KAAK,CAAC,KAAK,KAAK,KAAK,CAAC,KAAK;QAAE,OAAO;IACxC,IAAI,KAAK,CAAC,KAAK,CAAC,UAAU,CAAC,IAAI,KAAK,OAAO;QAAE,OAAO;IAEpD,IAAM,UAAU,GAAG,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;IACrE,IAAI,CAAC,UAAU;QAAE,OAAO;IAExB,IAAM,EAAE,GAAG,IAAI,GAAG,EAAsC,CAAC;IACzD,IAAM,EAAE,GAAG,IAAI,GAAG,EAAsC,CAAC;IACzD,cAAc,CAAC,EAAE,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC;IACtC,cAAc,CAAC,EAAE,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC;IAEtC,EAAE,CAAC,OAAO,CAAC,UAAC,MAAM,EAAE,EAAE;QAClB,IAAM,MAAM,GAAG,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;QAC1B,IAAI,MAAM,KAAK,SAAS,EAAE;YACtB,KAAK,CAAC,IAAI,CACN,wBAAwB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,EACtE,wBAAwB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,CACzE,CAAC;SACL;IACL,CAAC,CAAC,CAAC;AACP,CAAC;AAED,SAAS,YAAY,CAAC,KAA2B,EAAE,IAAU;IACzD,IAAI,IAAI,CAAC,KAAK,CAAC,UAAU,CAAC,IAAI,KAAK,OAAO;QAAE,OAAO;IAEnD,IAAM,UAAU,GAAG,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACpE,IAAI,CAAC,UAAU;QAAE,OAAO;IAEhB,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;IAC1B,IAAM,YAAY,GAAG,QAAQ,CAAC,MAAM,CAAC;IACrC,IAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC;IAEvB,IAAM,CAAC,GAAG,IAAI,GAAG,EAAwC,CAAC;4BAEjD,CAAC;QACN,IAAM,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QACtB,UAAU,CAAC,mBAAmB,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,OAAO,CAAC,UAAA,EAAE;YAC9C,IAAM,EAAE,GAAG,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;YACrB,IAAI,EAAE;gBAAE,EAAE,CAAC,IAAI,CAAC,CAA+B,CAAC,CAAC;;gBAC5C,CAAC,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAA+B,CAAC,CAAC,CAAC;QACtD,CAAC,CAAC,CAAC;;IANP,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,EAAE,CAAC,EAAE;gBAA5B,CAAC;KAOT;IAED,CAAC,CAAC,OAAO,CAAC,UAAC,EAAE,EAAE,EAAE;QACb,IAAI,EAAE,CAAC,MAAM,GAAG,CAAC;YAAE,OAAO;QACnB,IAAA,MAAM,GAAY,EAAE,GAAd,EAAE,MAAM,GAAI,EAAE,GAAN,CAAO;QAC5B,KAAK,CAAC,IAAI,CACN,wBAAwB,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,EACpE,wBAAwB,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,CACvE,CAAC;IACN,CAAC,CAAC,CAAC;AACP,CAAC;AAED,SAAS,wBAAwB,CAAC,KAAW,EAAE,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,UAAmC,EAAE,GAAW;IAChL,OAAO;QACH,KAAK,OAAA;QAAE,MAAM,QAAA;QAAE,KAAK,OAAA;QAAE,MAAM,QAAA;QAE5B,aAAa,EAAE,UAAU,CAAC,IAAI,CAAC,cAAc,CAAC,KAAK,CAAC,GAAG,CAAC;QACxD,iBAAiB,EAAE,UAAU,CAAC,IAAI,CAAC,kBAAkB,CAAC,KAAK,CAAC,GAAG,CAAC;QAChE,GAAG,EAAE,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC;QACnC,MAAM,EAAE,UAAU,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC;QAC1C,MAAM,EAAE,UAAU,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC;KAC7C,CAAC;AACN,CAAC;AAED,SAAS,0BAA0B,CAAC,SAAoB;IACpD,IAAM,KAAK,GAAyB,EAAE,CAAC;IACvC,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAvC,CAAuC,CAAC,EAAE;QACtE,OAAO,IAAI,cAAc,CAAC,KAAK,CAAC,CAAC;KACpC;IAED,IAAM,CAAC,GAAG,SAAS,CAAC,KAAK,CAAC,MAAM,CAAC;IACjC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,EAAE;QACxB,IAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QACjC,YAAY,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;QAC3B,KAAK,IAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,EAAE;YAC5B,IAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;YACjC,IAAI,KAAK,CAAC,KAAK,KAAK,KAAK,CAAC,KAAK,EAAE;gBAC7B,YAAY,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;aACrC;SACJ;KACJ;IAED,OAAO,IAAI,cAAc,CAAC,KAAK,CAAC,CAAC;AACrC,CAAC"}
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@@ -23,7 +23,7 @@ export declare const CrossLinkRestraintCylinderParams: {
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23
23
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dashCap: PD.BooleanParam;
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24
24
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stubCap: PD.BooleanParam;
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25
25
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radialSegments: PD.Numeric;
|
|
26
|
-
unitKinds: PD.MultiSelect<"
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26
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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|
27
27
|
includeParent: PD.BooleanParam;
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28
28
|
doubleSided: PD.BooleanParam;
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|
29
29
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flipSided: PD.BooleanParam;
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@@ -48,7 +48,7 @@ export declare const CrossLinkRestraintParams: {
|
|
|
48
48
|
dashCap: PD.BooleanParam;
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|
49
49
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stubCap: PD.BooleanParam;
|
|
50
50
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radialSegments: PD.Numeric;
|
|
51
|
-
unitKinds: PD.MultiSelect<"
|
|
51
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+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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52
52
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includeParent: PD.BooleanParam;
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53
53
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doubleSided: PD.BooleanParam;
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54
54
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flipSided: PD.BooleanParam;
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@@ -72,7 +72,7 @@ export declare function getCrossLinkRestraintParams(ctx: ThemeRegistryContext, s
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72
72
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dashCap: PD.BooleanParam;
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73
73
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stubCap: PD.BooleanParam;
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74
74
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radialSegments: PD.Numeric;
|
|
75
|
-
unitKinds: PD.MultiSelect<"
|
|
75
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
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|
76
76
|
includeParent: PD.BooleanParam;
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|
77
77
|
doubleSided: PD.BooleanParam;
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|
78
78
|
flipSided: PD.BooleanParam;
|
|
@@ -97,7 +97,7 @@ export declare const CrossLinkRestraintRepresentationProvider: StructureRepresen
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97
97
|
dashCap: PD.BooleanParam;
|
|
98
98
|
stubCap: PD.BooleanParam;
|
|
99
99
|
radialSegments: PD.Numeric;
|
|
100
|
-
unitKinds: PD.MultiSelect<"
|
|
100
|
+
unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
|
|
101
101
|
includeParent: PD.BooleanParam;
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102
102
|
doubleSided: PD.BooleanParam;
|
|
103
103
|
flipSided: PD.BooleanParam;
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|
@@ -5,7 +5,7 @@
|
|
|
5
5
|
*/
|
|
6
6
|
var emptyArray = [];
|
|
7
7
|
function getPairKey(indexA, unitA, indexB, unitB) {
|
|
8
|
-
return indexA
|
|
8
|
+
return "".concat(indexA, "|").concat(unitA.id, "|").concat(indexB, "|").concat(unitB.id);
|
|
9
9
|
}
|
|
10
10
|
var PairRestraints = /** @class */ (function () {
|
|
11
11
|
function PairRestraints(pairs) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"pair-restraints.js","sourceRoot":"","sources":["../../../src/mol-model-props/integrative/pair-restraints.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,IAAM,UAAU,GAAa,EAAE,CAAC;AAShC,SAAS,UAAU,CAAC,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;IAChH,
|
|
1
|
+
{"version":3,"file":"pair-restraints.js","sourceRoot":"","sources":["../../../src/mol-model-props/integrative/pair-restraints.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,IAAM,UAAU,GAAa,EAAE,CAAC;AAShC,SAAS,UAAU,CAAC,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;IAChH,OAAO,UAAG,MAAM,cAAI,KAAK,CAAC,EAAE,cAAI,MAAM,cAAI,KAAK,CAAC,EAAE,CAAE,CAAC;AACzD,CAAC;AAED;IAeI,wBAAmB,KAAuB;QAAvB,UAAK,GAAL,KAAK,CAAkB;QACtC,IAAM,cAAc,GAAG,IAAI,GAAG,EAAoB,CAAC;QACnD,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,UAAC,CAAC,EAAE,CAAC;YACpB,IAAM,GAAG,GAAG,UAAU,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;YAC7D,IAAM,OAAO,GAAG,cAAc,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YACxC,IAAI,OAAO;gBAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;;gBACxB,cAAc,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACtC,CAAC,CAAC,CAAC;QAEH,IAAI,CAAC,KAAK,GAAG,KAAK,CAAC,MAAM,CAAC;QAC1B,IAAI,CAAC,cAAc,GAAG,cAAc,CAAC;IACzC,CAAC;IAtBD,8BAA8B;IAC9B,uCAAc,GAAd,UAAe,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;QAC3G,IAAM,GAAG,GAAG,UAAU,CAAC,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;QACrD,OAAO,IAAI,CAAC,cAAc,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,UAAU,CAAC;IACtD,CAAC;IAED,iCAAQ,GAAR,UAAS,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;QAAzG,iBAGC;QAFG,IAAM,OAAO,GAAG,IAAI,CAAC,cAAc,CAAC,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;QAClE,OAAO,OAAO,CAAC,GAAG,CAAC,UAAA,GAAG,IAAI,OAAA,KAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAAf,CAAe,CAAC,CAAC;IAC/C,CAAC;IAcL,qBAAC;AAAD,CAAC,AA3BD,IA2BC"}
|
|
@@ -46,7 +46,7 @@ var BestDatabaseSequenceMapping;
|
|
|
46
46
|
var dbName = data.dbName[rI];
|
|
47
47
|
if (!dbName)
|
|
48
48
|
return;
|
|
49
|
-
return dbName
|
|
49
|
+
return "".concat(dbName, " ").concat(data.accession[rI], " ").concat(data.num[rI], " ").concat(data.residue[rI]);
|
|
50
50
|
}
|
|
51
51
|
BestDatabaseSequenceMapping.getLabel = getLabel;
|
|
52
52
|
function fromCif(model) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../src/mol-model-props/sequence/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,WAAW,EAAE,MAAM,yCAAyC,CAAC;AACtE,OAAO,EAAE,wBAAwB,EAAE,MAAM,iCAAiC,CAAC;AAG3E,OAAO,EAAE,mBAAmB,EAAE,MAAM,iCAAiC,CAAC;AAEtE,OAAO,EAAE,2BAA2B,EAAE,CAAC;AASvC,IAAU,2BAA2B,CAwEpC;AAxED,WAAU,2BAA2B;;IACpB,oCAAQ,GAAkE,mBAAmB,CAAC,cAAc,CAAC;QACtH,KAAK,EAAE,gCAAgC;QACvC,UAAU,EAAE,wBAAwB,CAAC;YACjC,IAAI,EAAE,wCAAwC;SACjD,CAAC;QACF,IAAI,EAAE,QAAQ;QACd,aAAa,EAAE,EAAE;QACjB,SAAS,EAAE,cAAM,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;QACrB,YAAY,EAAE,UAAC,IAAW,gBAAK,OAAA,WAAW,CAAC,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAA,MAAA,MAAA,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,0CAAE,SAAS,0CAAE,UAAU,CAAC,OAAO,CAAC,SAAS,CAAC,KAAI,CAAC,CAAA,EAAA;QACtJ,MAAM,EAAE,UAAO,GAAG,EAAE,IAAI;;gBACpB,sBAAO,EAAE,KAAK,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,EAAC;;aACnC;KACJ,CAAC,CAAC;IAEH,SAAgB,MAAM,CAAC,GAA8B;QACjD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO,EAAE,CAAC;QACrB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,OAAO,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC;IAC9B,CAAC;IAPe,kCAAM,SAOrB,CAAA;IAED,SAAgB,QAAQ,CAAC,GAA8B;QACnD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO;QAClB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,IAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;QAC/B,IAAI,CAAC,MAAM;YAAE,OAAO;QACpB,
|
|
1
|
+
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../src/mol-model-props/sequence/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,WAAW,EAAE,MAAM,yCAAyC,CAAC;AACtE,OAAO,EAAE,wBAAwB,EAAE,MAAM,iCAAiC,CAAC;AAG3E,OAAO,EAAE,mBAAmB,EAAE,MAAM,iCAAiC,CAAC;AAEtE,OAAO,EAAE,2BAA2B,EAAE,CAAC;AASvC,IAAU,2BAA2B,CAwEpC;AAxED,WAAU,2BAA2B;;IACpB,oCAAQ,GAAkE,mBAAmB,CAAC,cAAc,CAAC;QACtH,KAAK,EAAE,gCAAgC;QACvC,UAAU,EAAE,wBAAwB,CAAC;YACjC,IAAI,EAAE,wCAAwC;SACjD,CAAC;QACF,IAAI,EAAE,QAAQ;QACd,aAAa,EAAE,EAAE;QACjB,SAAS,EAAE,cAAM,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;QACrB,YAAY,EAAE,UAAC,IAAW,gBAAK,OAAA,WAAW,CAAC,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAA,MAAA,MAAA,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,0CAAE,SAAS,0CAAE,UAAU,CAAC,OAAO,CAAC,SAAS,CAAC,KAAI,CAAC,CAAA,EAAA;QACtJ,MAAM,EAAE,UAAO,GAAG,EAAE,IAAI;;gBACpB,sBAAO,EAAE,KAAK,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,EAAC;;aACnC;KACJ,CAAC,CAAC;IAEH,SAAgB,MAAM,CAAC,GAA8B;QACjD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO,EAAE,CAAC;QACrB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,OAAO,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC;IAC9B,CAAC;IAPe,kCAAM,SAOrB,CAAA;IAED,SAAgB,QAAQ,CAAC,GAA8B;QACnD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO;QAClB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,IAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;QAC/B,IAAI,CAAC,MAAM;YAAE,OAAO;QACpB,OAAO,UAAG,MAAM,cAAI,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,cAAI,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,cAAI,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC,CAAE,CAAC;IACjF,CAAC;IATe,oCAAQ,WASvB,CAAA;IAED,SAAS,OAAO,CAAC,KAAY;QACzB,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC;YAAE,OAAO;QAEtC,IAAA,SAAS,GAAK,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,UAA3C,CAA4C;QAC7D,IAAM,OAAO,GAAG,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;QAC9C,IAAM,MAAM,GAAG,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC;QAC5C,IAAM,MAAM,GAAG,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC;QAC5C,IAAM,MAAM,GAAG,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC;QAE5C,IAAI,CAAC,OAAO,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM;YAAE,OAAO;QAE9C,IAAA,eAAe,GAAK,KAAK,CAAC,eAAe,gBAA1B,CAA2B;QAC5C,IAAA,KAAqC,KAAK,CAAC,eAAe,CAAC,mBAAmB,EAA5E,KAAK,WAAA,EAAW,cAAc,aAA8C,CAAC;QACrF,IAAM,MAAM,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QACxC,IAAM,SAAS,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QAC3C,IAAM,GAAG,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QACrC,IAAM,OAAO,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QAEzC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,EAAE,CAAC,EAAE,EAAE;YAC5B,IAAM,GAAG,GAAG,eAAe,CAAC,KAAK,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC;YAErD,IAAI,OAAO,CAAC,SAAS,CAAC,GAAG,CAAC,oBAA6B,EAAE;gBACrD,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;gBACjB,SAAS,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;gBACpB,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;gBACb,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;gBAClB,SAAS;aACZ;YAED,MAAM,CAAC,GAAG,CAAC,GAAG,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YAC/B,SAAS,CAAC,GAAG,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YACjC,GAAG,CAAC,GAAG,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YAC3B,OAAO,CAAC,GAAG,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;SAClC;QAED,OAAO,EAAE,MAAM,QAAA,EAAE,SAAS,WAAA,EAAE,GAAG,KAAA,EAAE,OAAO,SAAA,EAAE,CAAC;IAC/C,CAAC;AACL,CAAC,EAxES,2BAA2B,KAA3B,2BAA2B,QAwEpC"}
|
|
@@ -33,7 +33,7 @@ export function BestDatabaseSequenceMappingColorTheme(ctx, props) {
|
|
|
33
33
|
}
|
|
34
34
|
}
|
|
35
35
|
var l_1 = StructureElement.Location.create(ctx.structure);
|
|
36
|
-
var palette_1 = getPalette(globalAccessionMap.size + 1, props, { valueLabel: function (i) { return ""
|
|
36
|
+
var palette_1 = getPalette(globalAccessionMap.size + 1, props, { valueLabel: function (i) { return "".concat(i); } });
|
|
37
37
|
var colorMap_1 = new Map();
|
|
38
38
|
var getColor_1 = function (location) {
|
|
39
39
|
var key = BestDatabaseSequenceMapping.getKey(location);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../../src/mol-model-props/sequence/themes/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,MAAM,8BAA8B,CAAC;AAG5E,OAAO,EAAE,KAAK,EAAE,MAAM,yBAAyB,CAAC;AAChD,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AAC/E,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAE3E,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AAEvE,IAAM,YAAY,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC;AACrC,IAAM,WAAW,GAAG,0DAA0D,CAAC;AAE/E,kCAAkC;AAClC,IAAM,kBAAkB,GAAG,IAAI,GAAG,EAAkB,CAAC;AAErD,MAAM,CAAC,IAAM,2CAA2C,gBACjD,gBAAgB,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,CAAC,CAC9D,CAAC;AAEF,MAAM,UAAU,8CAA8C,CAAC,GAAqB;IAChF,OAAO,2CAA2C,CAAC,CAAC,mBAAmB;AAC3E,CAAC;AACD,MAAM,UAAU,qCAAqC,CAAC,GAAqB,EAAE,KAA6D;IACtI,IAAI,KAAoB,CAAC;IAEzB,IAAI,GAAG,CAAC,SAAS,EAAE;QACf,KAAgB,UAAoB,EAApB,KAAA,GAAG,CAAC,SAAS,CAAC,MAAM,EAApB,cAAoB,EAApB,IAAoB,EAAE;YAAjC,IAAM,CAAC,SAAA;YACR,IAAM,OAAO,GAAG,2BAA2B,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;YAClE,IAAI,CAAC,OAAO;gBAAE,SAAS;YACvB,KAAkB,UAAiB,EAAjB,KAAA,OAAO,CAAC,SAAS,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;gBAAhC,IAAM,GAAG,SAAA;gBACV,IAAI,CAAC,GAAG,IAAI,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAC;oBAAE,SAAS;gBAClD,kBAAkB,CAAC,GAAG,CAAC,GAAG,EAAE,kBAAkB,CAAC,IAAI,CAAC,CAAC;aACxD;SACJ;QAED,IAAM,GAAC,GAAG,gBAAgB,CAAC,QAAQ,CAAC,MAAM,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;QAC1D,IAAM,SAAO,GAAG,UAAU,CAAC,kBAAkB,CAAC,IAAI,GAAG,CAAC,EAAE,KAAK,EAAE,EAAE,UAAU,EAAE,UAAA,CAAC,IAAI,OAAA,
|
|
1
|
+
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../../src/mol-model-props/sequence/themes/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,MAAM,8BAA8B,CAAC;AAG5E,OAAO,EAAE,KAAK,EAAE,MAAM,yBAAyB,CAAC;AAChD,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AAC/E,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAE3E,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AAEvE,IAAM,YAAY,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC;AACrC,IAAM,WAAW,GAAG,0DAA0D,CAAC;AAE/E,kCAAkC;AAClC,IAAM,kBAAkB,GAAG,IAAI,GAAG,EAAkB,CAAC;AAErD,MAAM,CAAC,IAAM,2CAA2C,gBACjD,gBAAgB,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,CAAC,CAC9D,CAAC;AAEF,MAAM,UAAU,8CAA8C,CAAC,GAAqB;IAChF,OAAO,2CAA2C,CAAC,CAAC,mBAAmB;AAC3E,CAAC;AACD,MAAM,UAAU,qCAAqC,CAAC,GAAqB,EAAE,KAA6D;IACtI,IAAI,KAAoB,CAAC;IAEzB,IAAI,GAAG,CAAC,SAAS,EAAE;QACf,KAAgB,UAAoB,EAApB,KAAA,GAAG,CAAC,SAAS,CAAC,MAAM,EAApB,cAAoB,EAApB,IAAoB,EAAE;YAAjC,IAAM,CAAC,SAAA;YACR,IAAM,OAAO,GAAG,2BAA2B,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;YAClE,IAAI,CAAC,OAAO;gBAAE,SAAS;YACvB,KAAkB,UAAiB,EAAjB,KAAA,OAAO,CAAC,SAAS,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;gBAAhC,IAAM,GAAG,SAAA;gBACV,IAAI,CAAC,GAAG,IAAI,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAC;oBAAE,SAAS;gBAClD,kBAAkB,CAAC,GAAG,CAAC,GAAG,EAAE,kBAAkB,CAAC,IAAI,CAAC,CAAC;aACxD;SACJ;QAED,IAAM,GAAC,GAAG,gBAAgB,CAAC,QAAQ,CAAC,MAAM,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;QAC1D,IAAM,SAAO,GAAG,UAAU,CAAC,kBAAkB,CAAC,IAAI,GAAG,CAAC,EAAE,KAAK,EAAE,EAAE,UAAU,EAAE,UAAA,CAAC,IAAI,OAAA,UAAG,CAAC,CAAE,EAAN,CAAM,EAAE,CAAC,CAAC;QAC5F,IAAM,UAAQ,GAAG,IAAI,GAAG,EAAiB,CAAC;QAE1C,IAAM,UAAQ,GAAG,UAAC,QAAmC;YACjD,IAAM,GAAG,GAAG,2BAA2B,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC;YACzD,IAAI,CAAC,GAAG;gBAAE,OAAO,YAAY,CAAC;YAE9B,IAAI,UAAQ,CAAC,GAAG,CAAC,GAAG,CAAC;gBAAE,OAAO,UAAQ,CAAC,GAAG,CAAC,GAAG,CAAE,CAAC;YAEjD,IAAM,KAAK,GAAG,SAAO,CAAC,KAAK,CAAC,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAE,CAAC,CAAC;YAC1D,UAAQ,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,CAAC;YACzB,OAAO,KAAK,CAAC;QACjB,CAAC,CAAC;QAEF,KAAK,GAAG,UAAC,QAAkB;YACvB,IAAI,gBAAgB,CAAC,QAAQ,CAAC,EAAE,CAAC,QAAQ,CAAC,IAAI,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;gBACxE,OAAO,UAAQ,CAAC,QAAQ,CAAC,CAAC;aAC7B;iBAAM,IAAI,IAAI,CAAC,UAAU,CAAC,QAAQ,CAAC,EAAE;gBAClC,GAAC,CAAC,IAAI,GAAG,QAAQ,CAAC,KAAK,CAAC;gBACxB,GAAC,CAAC,OAAO,GAAG,QAAQ,CAAC,KAAK,CAAC,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;gBACrD,OAAO,UAAQ,CAAC,GAAC,CAAC,CAAC;aACtB;YACD,OAAO,YAAY,CAAC;QACxB,CAAC,CAAC;KACL;SAAM;QACH,KAAK,GAAG,cAAM,OAAA,YAAY,EAAZ,CAAY,CAAC;KAC9B;IAED,OAAO;QACH,OAAO,EAAE,qCAAqC;QAC9C,WAAW,EAAE,OAAO;QACpB,eAAe,EAAE,IAAI;QACrB,KAAK,OAAA;QACL,KAAK,OAAA;QACL,WAAW,EAAE,WAAW;KAC3B,CAAC;AACN,CAAC;AAED,MAAM,CAAC,IAAM,6CAA6C,GAAuG;IAC7J,IAAI,EAAE,gCAAgC;IACtC,KAAK,EAAE,gCAAgC;IACvC,QAAQ,kCAA6B;IACrC,OAAO,EAAE,qCAAqC;IAC9C,SAAS,EAAE,8CAA8C;IACzD,aAAa,EAAE,EAAE,CAAC,gBAAgB,CAAC,2CAA2C,CAAC;IAC/E,YAAY,EAAE,UAAC,GAAqB,YAAK,OAAA,CAAC,CAAC,CAAA,MAAA,GAAG,CAAC,SAAS,0CAAE,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,2BAA2B,CAAC,QAAQ,CAAC,YAAY,CAAC,CAAC,CAAC,EAApD,CAAoD,CAAC,CAAA,CAAA,EAAA;IAChI,sBAAsB,EAAE;QACpB,MAAM,EAAE,UAAO,GAA2B,EAAE,IAAsB;;;;;wBAC9D,IAAI,CAAC,IAAI,CAAC,SAAS;4BAAE,sBAAO;8BAES,EAArB,KAAA,IAAI,CAAC,SAAS,CAAC,MAAM;;;6BAArB,CAAA,cAAqB,CAAA;wBAA1B,CAAC;wBACR,qBAAM,2BAA2B,CAAC,QAAQ,CAAC,MAAM,CAAC,GAAG,EAAE,CAAC,EAAE,KAAK,CAAC,EAAE,IAAI,CAAC,EAAA;;wBAAvE,SAAuE,CAAC;;;wBAD5D,IAAqB,CAAA;;;;;aAGxC;QACD,MAAM,EAAE,UAAC,IAAI;YACT,IAAI,CAAC,IAAI,CAAC,SAAS;gBAAE,OAAO;YAC5B,KAAgB,UAAqB,EAArB,KAAA,IAAI,CAAC,SAAS,CAAC,MAAM,EAArB,cAAqB,EAArB,IAAqB,EAAE;gBAAlC,IAAM,CAAC,SAAA;gBACR,2BAA2B,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC;aACtD;QACL,CAAC;KACJ;CACJ,CAAC"}
|
|
@@ -114,7 +114,7 @@ declare namespace PluginBehavior {
|
|
|
114
114
|
export const CreateCategory: StateTransformer<Root, Category, ParamDefinition.Normalize<{
|
|
115
115
|
label: string;
|
|
116
116
|
}>>;
|
|
117
|
-
export function getCategoryId(t: StateTransformer): "representation" | "
|
|
117
|
+
export function getCategoryId(t: StateTransformer): "representation" | "interaction" | "common" | "custom-props" | "misc";
|
|
118
118
|
export function create<P>(params: CreateParams<P>): StateTransformer<Category, Behavior, P>;
|
|
119
119
|
export function simpleCommandHandler<T>(cmd: PluginCommand<T>, action: (data: T, ctx: PluginContext) => void | Promise<void>): {
|
|
120
120
|
new (ctx: PluginContext): {
|
|
@@ -90,14 +90,14 @@ function accessibleSurfaceAreaLabel(loci) {
|
|
|
90
90
|
}
|
|
91
91
|
if (seen_1.size === 0)
|
|
92
92
|
return;
|
|
93
|
-
var residueCount = "<small>("
|
|
94
|
-
return "Accessible Surface Area "
|
|
93
|
+
var residueCount = "<small>(".concat(seen_1.size, " ").concat(seen_1.size > 1 ? 'Residues sum' : 'Residue', ")</small>");
|
|
94
|
+
return "Accessible Surface Area ".concat(residueCount, ": ").concat(cummulativeArea_1.toFixed(2), " \u212B<sup>2</sup>");
|
|
95
95
|
}
|
|
96
96
|
else if (loci.kind === 'structure-loci') {
|
|
97
97
|
var accessibleSurfaceArea = AccessibleSurfaceAreaProvider.get(loci.structure).value;
|
|
98
98
|
if (!accessibleSurfaceArea || loci.structure.customPropertyDescriptors.hasReference(AccessibleSurfaceAreaProvider.descriptor))
|
|
99
99
|
return;
|
|
100
|
-
return "Accessible Surface Area <small>(Whole Structure)</small>: "
|
|
100
|
+
return "Accessible Surface Area <small>(Whole Structure)</small>: ".concat(arraySum(accessibleSurfaceArea.area).toFixed(2), " \u212B<sup>2</sup>");
|
|
101
101
|
}
|
|
102
102
|
}
|
|
103
103
|
//
|
package/lib/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"accessible-surface-area.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,6BAA6B,EAAE,4BAA4B,EAAE,MAAM,iEAAiE,CAAC;AAE9I,OAAO,EAAE,uCAAuC,EAAE,MAAM,wEAAwE,CAAC;AACjI,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,QAAQ,EAAE,MAAM,+BAA+B,CAAC;AACzD,OAAO,EAAE,wBAAwB,EAAE,MAAM,kDAAkD,CAAC;AAC5F,OAAO,EAAE,uBAAuB,EAAE,0BAA0B,EAAE,MAAM,mEAAmE,CAAC;AACxI,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,4CAA4C,CAAC;AAEpF,MAAM,CAAC,IAAM,qBAAqB,GAAG,cAAc,CAAC,MAAM,CAAgD;IACtG,IAAI,EAAE,uCAAuC;IAC7C,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,yBAAyB,EAAE;IAC5C,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEAwCL;YAvCW,cAAQ,GAAG,6BAA6B,CAAA;YAExC,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO;oBACrC,OAAO,0BAA0B,CAAC,IAAI,CAAC,CAAC;gBAC5C,CAAC;aACJ,CAAA;;QAgCL,CAAC;QA9BG,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,wBAAwB,CAAC,aAAa,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;YAEjE,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,GAAG,CAAC,uCAAuC,CAAC,CAAC;YACzG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;YAChD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;QACxD,CAAC;QAED,4BAAU,GAAV;YACI,wBAAwB,CAAC,gBAAgB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;YAEpE,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,MAAM,CAAC,uCAAuC,CAAC,CAAC;YAC5G,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAChE,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC;YACnD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QAC3D,CAAC;QACL,cAAC;IAAD,CAAC,AAxCK,CAAc,cAAc,CAAC,OAAO,EAwCzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC;AAEH,EAAE;AAEF,SAAS,0BAA0B,CAAC,IAAU;IAC1C,IAAI,IAAI,CAAC,IAAI,KAAK,cAAc,EAAE;QAC9B,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO;QAEvC,IAAM,qBAAqB,GAAG,6BAA6B,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;QACtF,IAAI,CAAC,qBAAqB,IAAI,IAAI,CAAC,SAAS,CAAC,yBAAyB,CAAC,YAAY,CAAC,6BAA6B,CAAC,UAAU,CAAC;YAAE,OAAO;QAE9H,IAAA,gBAAc,GAAK,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,aAAa,eAAtC,CAAuC;QACrD,IAAA,MAAI,GAAyB,qBAAqB,KAA9C,EAAE,oBAAkB,GAAK,qBAAqB,mBAA1B,CAA2B;QAC3D,IAAM,MAAI,GAAG,IAAI,GAAG,EAAU,CAAC;QAC/B,IAAI,iBAAe,GAAG,CAAC,CAAC;gCAEX,OAAO,EAAE,IAAI;YACd,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;YAE1B,UAAU,CAAC,OAAO,CAAC,OAAO,EAAE,UAAA,GAAG;gBAC3B,IAAM,GAAG,GAAG,oBAAkB,CAAC,gBAAc,CAAC,IAAI,EAAE,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;gBACpE,IAAI,GAAG,KAAK,CAAC,CAAC,IAAI,CAAC,MAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE;oBAC9B,iBAAe,IAAI,MAAI,CAAC,GAAG,CAAC,CAAC;oBAC7B,MAAI,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;iBACjB;YACL,CAAC,CAAC,CAAC;;QATP,KAAgC,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAlC,IAAA,WAAiB,EAAf,OAAO,aAAA,EAAE,IAAI,UAAA;oBAAb,OAAO,EAAE,IAAI;SAUzB;QACD,IAAI,MAAI,CAAC,IAAI,KAAK,CAAC;YAAE,OAAO;QAC5B,IAAM,YAAY,GAAG,
|
|
1
|
+
{"version":3,"file":"accessible-surface-area.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,6BAA6B,EAAE,4BAA4B,EAAE,MAAM,iEAAiE,CAAC;AAE9I,OAAO,EAAE,uCAAuC,EAAE,MAAM,wEAAwE,CAAC;AACjI,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,QAAQ,EAAE,MAAM,+BAA+B,CAAC;AACzD,OAAO,EAAE,wBAAwB,EAAE,MAAM,kDAAkD,CAAC;AAC5F,OAAO,EAAE,uBAAuB,EAAE,0BAA0B,EAAE,MAAM,mEAAmE,CAAC;AACxI,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,4CAA4C,CAAC;AAEpF,MAAM,CAAC,IAAM,qBAAqB,GAAG,cAAc,CAAC,MAAM,CAAgD;IACtG,IAAI,EAAE,uCAAuC;IAC7C,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,yBAAyB,EAAE;IAC5C,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEAwCL;YAvCW,cAAQ,GAAG,6BAA6B,CAAA;YAExC,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO;oBACrC,OAAO,0BAA0B,CAAC,IAAI,CAAC,CAAC;gBAC5C,CAAC;aACJ,CAAA;;QAgCL,CAAC;QA9BG,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,wBAAwB,CAAC,aAAa,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;YAEjE,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,GAAG,CAAC,uCAAuC,CAAC,CAAC;YACzG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;YAChD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;QACxD,CAAC;QAED,4BAAU,GAAV;YACI,wBAAwB,CAAC,gBAAgB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;YAEpE,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,MAAM,CAAC,uCAAuC,CAAC,CAAC;YAC5G,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAChE,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC;YACnD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QAC3D,CAAC;QACL,cAAC;IAAD,CAAC,AAxCK,CAAc,cAAc,CAAC,OAAO,EAwCzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC;AAEH,EAAE;AAEF,SAAS,0BAA0B,CAAC,IAAU;IAC1C,IAAI,IAAI,CAAC,IAAI,KAAK,cAAc,EAAE;QAC9B,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO;QAEvC,IAAM,qBAAqB,GAAG,6BAA6B,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;QACtF,IAAI,CAAC,qBAAqB,IAAI,IAAI,CAAC,SAAS,CAAC,yBAAyB,CAAC,YAAY,CAAC,6BAA6B,CAAC,UAAU,CAAC;YAAE,OAAO;QAE9H,IAAA,gBAAc,GAAK,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,aAAa,eAAtC,CAAuC;QACrD,IAAA,MAAI,GAAyB,qBAAqB,KAA9C,EAAE,oBAAkB,GAAK,qBAAqB,mBAA1B,CAA2B;QAC3D,IAAM,MAAI,GAAG,IAAI,GAAG,EAAU,CAAC;QAC/B,IAAI,iBAAe,GAAG,CAAC,CAAC;gCAEX,OAAO,EAAE,IAAI;YACd,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;YAE1B,UAAU,CAAC,OAAO,CAAC,OAAO,EAAE,UAAA,GAAG;gBAC3B,IAAM,GAAG,GAAG,oBAAkB,CAAC,gBAAc,CAAC,IAAI,EAAE,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;gBACpE,IAAI,GAAG,KAAK,CAAC,CAAC,IAAI,CAAC,MAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE;oBAC9B,iBAAe,IAAI,MAAI,CAAC,GAAG,CAAC,CAAC;oBAC7B,MAAI,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;iBACjB;YACL,CAAC,CAAC,CAAC;;QATP,KAAgC,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAlC,IAAA,WAAiB,EAAf,OAAO,aAAA,EAAE,IAAI,UAAA;oBAAb,OAAO,EAAE,IAAI;SAUzB;QACD,IAAI,MAAI,CAAC,IAAI,KAAK,CAAC;YAAE,OAAO;QAC5B,IAAM,YAAY,GAAG,kBAAW,MAAI,CAAC,IAAI,cAAI,MAAI,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,cAAc,CAAC,CAAC,CAAC,SAAS,cAAW,CAAC;QAEnG,OAAO,kCAA2B,YAAY,eAAK,iBAAe,CAAC,OAAO,CAAC,CAAC,CAAC,wBAAqB,CAAC;KAEtG;SAAM,IAAI,IAAI,CAAC,IAAI,KAAK,gBAAgB,EAAE;QACvC,IAAM,qBAAqB,GAAG,6BAA6B,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;QACtF,IAAI,CAAC,qBAAqB,IAAI,IAAI,CAAC,SAAS,CAAC,yBAAyB,CAAC,YAAY,CAAC,6BAA6B,CAAC,UAAU,CAAC;YAAE,OAAO;QAEtI,OAAO,oEAA6D,QAAQ,CAAC,qBAAqB,CAAC,IAAI,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,wBAAqB,CAAC;KAC5I;AACL,CAAC;AAED,EAAE;AAEF,IAAM,QAAQ,GAAG,uBAAuB,CAAC,yBAAyB,EAAE,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC;IACzF,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,aAAa,CAAC;QAC7B,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC;YACrB,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC;gBAC3B,YAAY,EAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,EAAE,WAAW,CAAC,CAAC;gBACvE,cAAc,EAAE,4BAA4B,CAAC,QAAQ,CAAC,MAAM,EAAE;aACjE,CAAC;SACL,CAAC;KACL,CAAC;CACL,CAAC,EAAE;IACA,WAAW,EAAE,iCAAiC;IAC9C,QAAQ,EAAE,0BAA0B,CAAC,OAAO;IAC5C,sBAAsB,EAAE,UAAC,GAAG,EAAE,SAAS;QACnC,OAAO,6BAA6B,CAAC,MAAM,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IAChE,CAAC;CACJ,CAAC,CAAC;AAEH,IAAM,YAAY,GAAG,uBAAuB,CAAC,6BAA6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|
|
@@ -63,11 +63,11 @@ export var Interactions = PluginBehavior.create({
|
|
|
63
63
|
groupLabels.push(featureGroupLabel(group));
|
|
64
64
|
}
|
|
65
65
|
if (typeLabels.length)
|
|
66
|
-
label.push("<small>Types</small> "
|
|
66
|
+
label.push("<small>Types</small> ".concat(typeLabels.join(', ')));
|
|
67
67
|
if (groupLabels.length)
|
|
68
|
-
label.push("<small>Groups</small> "
|
|
68
|
+
label.push("<small>Groups</small> ".concat(groupLabels.join(', ')));
|
|
69
69
|
if (label.length)
|
|
70
|
-
labels.push("Interaction Feature: "
|
|
70
|
+
labels.push("Interaction Feature: ".concat(label.join(' | ')));
|
|
71
71
|
}
|
|
72
72
|
return labels.length ? labels.join('<br/>') : undefined;
|
|
73
73
|
default: return void 0;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"interactions.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/interactions.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,sDAAsD,CAAC;AAE5F,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,gBAAgB,EAAE,MAAM,sDAAsD,CAAC;AACxF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,MAAM,6DAA6D,CAAC;AAElH,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAC5D,OAAO,EAAE,iCAAiC,EAAE,MAAM,iEAAiE,CAAC;AACpH,OAAO,EAAE,kCAAkC,EAAE,MAAM,sEAAsE,CAAC;AAE1H,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,4BAA4B;IAClC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,cAAc,EAAE;IACjC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA0FL;YAzFW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,QAAQ,GAAG,YAAY,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCAC3D,IAAI,CAAC,QAAQ;oCAAE,SAAS;gCAExB,IAAM,UAAU,GAAa,EAAE,CAAC;gCAChC,IAAM,WAAW,GAAa,EAAE,CAAC;gCACjC,IAAM,KAAK,GAAa,EAAE,CAAC;gCAE3B,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCAChC,IAAA,KAAK,GAAkD,QAAQ,MAA1D,EAAE,MAAM,GAA0C,QAAQ,OAAlD,EAAE,KAAwC,QAAQ,cAAb,EAAlB,OAAO,aAAA,EAAE,OAAO,aAAE,CAAc;gCACxE,KAAK,IAAI,CAAC,GAAG,OAAO,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,OAAO,CAAC,GAAG,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;oCAC3D,IAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;oCACrB,IAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;oCACtB,IAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;oCACxB,IAAI,IAAI;wCAAE,UAAU,CAAC,IAAI,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC,CAAC;oCAClD,IAAI,KAAK;wCAAE,WAAW,CAAC,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,CAAC;iCACzD;gCAED,IAAI,UAAU,CAAC,MAAM;oCAAE,KAAK,CAAC,IAAI,CAAC,
|
|
1
|
+
{"version":3,"file":"interactions.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/interactions.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,sDAAsD,CAAC;AAE5F,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,gBAAgB,EAAE,MAAM,sDAAsD,CAAC;AACxF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,MAAM,6DAA6D,CAAC;AAElH,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAC5D,OAAO,EAAE,iCAAiC,EAAE,MAAM,iEAAiE,CAAC;AACpH,OAAO,EAAE,kCAAkC,EAAE,MAAM,sEAAsE,CAAC;AAE1H,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,4BAA4B;IAClC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,cAAc,EAAE;IACjC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA0FL;YAzFW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,QAAQ,GAAG,YAAY,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCAC3D,IAAI,CAAC,QAAQ;oCAAE,SAAS;gCAExB,IAAM,UAAU,GAAa,EAAE,CAAC;gCAChC,IAAM,WAAW,GAAa,EAAE,CAAC;gCACjC,IAAM,KAAK,GAAa,EAAE,CAAC;gCAE3B,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCAChC,IAAA,KAAK,GAAkD,QAAQ,MAA1D,EAAE,MAAM,GAA0C,QAAQ,OAAlD,EAAE,KAAwC,QAAQ,cAAb,EAAlB,OAAO,aAAA,EAAE,OAAO,aAAE,CAAc;gCACxE,KAAK,IAAI,CAAC,GAAG,OAAO,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,OAAO,CAAC,GAAG,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;oCAC3D,IAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;oCACrB,IAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;oCACtB,IAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;oCACxB,IAAI,IAAI;wCAAE,UAAU,CAAC,IAAI,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC,CAAC;oCAClD,IAAI,KAAK;wCAAE,WAAW,CAAC,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,CAAC;iCACzD;gCAED,IAAI,UAAU,CAAC,MAAM;oCAAE,KAAK,CAAC,IAAI,CAAC,+BAAwB,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,CAAE,CAAC,CAAC;gCACnF,IAAI,WAAW,CAAC,MAAM;oCAAE,KAAK,CAAC,IAAI,CAAC,gCAAyB,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,CAAE,CAAC,CAAC;gCACtF,IAAI,KAAK,CAAC,MAAM;oCAAE,MAAM,CAAC,IAAI,CAAC,+BAAwB,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAE,CAAC,CAAC;6BAC9E;4BAED,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;wBAE5D,OAAO,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC;qBAC1B;gBACL,CAAC;aACJ,CAAA;;QA0BL,CAAC;QAvFW,+BAAa,GAArB,UAAsB,SAAoB;YACtC,IAAM,UAAU,GAAgB,EAAE,CAAC;YACnC,IAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,kBAAkB,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;YAChE,IAAI,IAAI,EAAE;gBACN,IAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBAClC,IAAM,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,MAAM,CAAC,iBAAiB,CAAC,QAAQ,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC5H,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;oBAAvB,IAAM,CAAC,mBAAA;oBACR,IAAI,CAAC,CAAC,GAAG;wBAAE,WAAW,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;iBAClD;aACJ;YACD,OAAO,UAAU,CAAC;QACtB,CAAC;QAoDD,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,GAAG,CAAC,iCAAiC,CAAC,CAAC;YACnG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,kCAAkC,CAAC,CAAC;QACvF,CAAC;QAED,4BAAU,GAAV;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,MAAM,CAAC,iCAAiC,CAAC,CAAC;YACtG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAChE,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,kCAAkC,CAAC,CAAC;QAC1F,CAAC;QACL,cAAC;IAAD,CAAC,AA1FK,CAAc,cAAc,CAAC,OAAO,EA0FzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,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@@ -51,7 +51,7 @@ export var ValenceModel = PluginBehavior.create({
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51
51
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var idealGeometry = vm.idealGeometry[idx];
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52
52
|
var implicitH = vm.implicitH[idx];
|
|
53
53
|
var totalH = vm.totalH[idx];
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54
|
-
labels.push("Valence Model: <small>Charge</small> "
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54
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+
labels.push("Valence Model: <small>Charge</small> ".concat(charge, " | <small>Ideal Geometry</small> ").concat(geometryLabel(idealGeometry), " | <small>Implicit H</small> ").concat(implicitH, " | <small>Total H</small> ").concat(totalH));
|
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55
55
|
}
|
|
56
56
|
return labels.length ? labels.join('<br/>') : undefined;
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57
57
|
default: return void 0;
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"valence-model.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAE7F,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAa,gBAAgB,EAAE,MAAM,oCAAoC,CAAC;AACjF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,aAAa,EAAE,MAAM,4DAA4D,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAE5D,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,6BAA6B;IACnC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,eAAe,EAAE;IAClC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA4EL;YA3EW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,EAAE,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCACvC,IAAI,CAAC,EAAE;oCAAE,SAAS;gCAElB,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCACxC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAC9B,IAAM,aAAa,GAAG,EAAE,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;gCAC5C,IAAM,SAAS,GAAG,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC;gCACpC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAE9B,MAAM,CAAC,IAAI,CAAC,
|
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1
|
+
{"version":3,"file":"valence-model.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAE7F,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAa,gBAAgB,EAAE,MAAM,oCAAoC,CAAC;AACjF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,aAAa,EAAE,MAAM,4DAA4D,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAE5D,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,6BAA6B;IACnC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,eAAe,EAAE;IAClC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA4EL;YA3EW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,EAAE,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCACvC,IAAI,CAAC,EAAE;oCAAE,SAAS;gCAElB,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCACxC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAC9B,IAAM,aAAa,GAAG,EAAE,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;gCAC5C,IAAM,SAAS,GAAG,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC;gCACpC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAE9B,MAAM,CAAC,IAAI,CAAC,+CAAwC,MAAM,8CAAoC,aAAa,CAAC,aAAa,CAAC,0CAAgC,SAAS,uCAA6B,MAAM,CAAE,CAAC,CAAC;6BAC7M;4BAED,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;wBAE5D,OAAO,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC;qBAC1B;gBACL,CAAC;aACJ,CAAA;;QAsBL,CAAC;QAzEW,+BAAa,GAArB,UAAsB,SAAoB;YACtC,IAAM,UAAU,GAAgB,EAAE,CAAC;YACnC,IAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,kBAAkB,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;YAChE,IAAI,IAAI,EAAE;gBACN,IAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBAClC,IAAM,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,MAAM,CAAC,iBAAiB,CAAC,QAAQ,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC5H,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;oBAAvB,IAAM,CAAC,mBAAA;oBACR,IAAI,CAAC,CAAC,GAAG;wBAAE,WAAW,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;iBAClD;aACJ;YACD,OAAO,UAAU,CAAC;QACtB,CAAC;QA0CD,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACjE,CAAC;QAED,4BAAU,GAAV;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACpE,CAAC;QACL,cAAC;IAAD,CAAC,AA5EK,CAAc,cAAc,CAAC,OAAO,EA4EzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC"}
|
|
@@ -12,7 +12,7 @@ export declare const HighlightLoci: import("../../../mol-state/transformer").Sta
|
|
|
12
12
|
hoverHighlightOnly: Binding;
|
|
13
13
|
hoverHighlightOnlyExtend: Binding;
|
|
14
14
|
}>;
|
|
15
|
-
ignore: PD.Value<("every-loci" | "empty-loci" | "
|
|
15
|
+
ignore: PD.Value<("every-loci" | "empty-loci" | "element-loci" | "structure-loci" | "bond-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "shape-loci" | "group-loci" | "data-loci")[]>;
|
|
16
16
|
preferAtoms: PD.BooleanParam;
|
|
17
17
|
mark: PD.BooleanParam;
|
|
18
18
|
}>>;
|
|
@@ -25,7 +25,7 @@ export declare const SelectLoci: import("../../../mol-state/transformer").StateT
|
|
|
25
25
|
clickDeselect: Binding;
|
|
26
26
|
clickDeselectAllOnEmpty: Binding;
|
|
27
27
|
}>;
|
|
28
|
-
ignore: PD.Value<("every-loci" | "empty-loci" | "
|
|
28
|
+
ignore: PD.Value<("every-loci" | "empty-loci" | "element-loci" | "structure-loci" | "bond-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "shape-loci" | "group-loci" | "data-loci")[]>;
|
|
29
29
|
preferAtoms: PD.BooleanParam;
|
|
30
30
|
mark: PD.BooleanParam;
|
|
31
31
|
}>>;
|
|
@@ -59,7 +59,7 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
|
|
|
59
59
|
return _this;
|
|
60
60
|
}
|
|
61
61
|
Object.defineProperty(StructureFocusRepresentationBehavior.prototype, "surrLabel", {
|
|
62
|
-
get: function () { return "[Focus] Surroundings ("
|
|
62
|
+
get: function () { return "[Focus] Surroundings (".concat(this.params.expandRadius, " \u00C5)"); },
|
|
63
63
|
enumerable: false,
|
|
64
64
|
configurable: true
|
|
65
65
|
});
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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+
{"version":3,"file":"structure-focus-representation.js","sourceRoot":"","sources":["../../../../../src/mol-plugin/behavior/dynamic/selection/structure-focus-representation.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAE,kCAAkC,EAAE,MAAM,mEAAmE,CAAC;AACvH,OAAO,EAAE,iCAAiC,EAAE,MAAM,8DAA8D,CAAC;AACjH,OAAO,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AACnE,OAAO,EAAE,mCAAmC,EAAE,MAAM,sEAAsE,CAAC;AAE3H,OAAO,EAAE,eAAe,EAAE,MAAM,yCAAyC,CAAC;AAC1E,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,yCAAyC,CAAC;AACjF,OAAO,EAAmB,cAAc,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACxF,OAAO,EAAE,SAAS,EAAE,MAAM,4BAA4B,CAAC;AACvD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,uCAAuC,CAAC;AAC9E,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAGnD,IAAM,kCAAkC,GAAG,UAAC,MAAqB;IAC7D,IAAM,UAAU,GAAG,eAAe,CAAC,cAAc,CAAC,yBAAyB,CAAC,UAAU,CAAC,MAAO,CAAC,KAAK,CAAC,EAAE,MAAM,CAAc,CAAC;IAC5H,OAAO;QACH,YAAY,EAAE,EAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,CAAC,EAAE,CAAC;QACzD,YAAY,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,EAAE;YAC/B,KAAK,EAAE,QAAQ;YACf,aAAa,EAAE,mCAAmC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,KAAK,EAAE,IAAI,EAAE,oBAAoB,EAAE,IAAI,EAAE,EAAE,CAAC;SAC9L,CAAC;QACF,kBAAkB,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,EAAE;YACrC,KAAK,EAAE,cAAc;YACrB,aAAa,EAAE,mCAAmC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,EAAE,CAAC;SACrJ,CAAC;QACF,SAAS,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,EAAE;YAC5B,KAAK,EAAE,mBAAmB;YAC1B,aAAa,EAAE,mCAAmC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE;gBAC/D,IAAI,EAAE,kCAAkC;gBACxC,KAAK,EAAE,iCAAiC;gBACxC,IAAI,EAAE,SAAS,CAAC,OAAO,CAAC,OAAO;aAClC,CAAC;SACL,CAAC;QACF,UAAU,EAAE,EAAE,CAAC,WAAW,CAAC,eAAe,EAAE,EAAE,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC;QAC/E,6BAA6B,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,EAAE,EAAE,KAAK,EAAE,gBAAgB,EAAE,WAAW,EAAE,4DAA4D,EAAE,CAAC;QACxJ,eAAe,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;KACrC,CAAC;AACN,CAAC,CAAC;AAEF,IAAM,eAAe,GAAG,CAAC,QAAiB,EAAE,cAAuB,EAAE,cAAuB,CAAC,CAAC;AAI9F,MAAM,CAAN,IAAY,gCAMX;AAND,WAAY,gCAAgC;IACxC,4EAAwC,CAAA;IACxC,8EAA0C,CAAA;IAC1C,wEAAoC,CAAA;IACpC,0EAAsC,CAAA;IACtC,iFAA6C,CAAA;AACjD,CAAC,EANW,gCAAgC,KAAhC,gCAAgC,QAM3C;AAED,IAAM,MAAM,GAA0C,IAAI,GAAG,CAAC,CAAC,gCAAgC,CAAC,SAAS,EAAE,gCAAgC,CAAC,UAAU,EAAE,gCAAgC,CAAC,OAAO,EAAE,gCAAgC,CAAC,QAAQ,EAAE,gCAAgC,CAAC,WAAW,CAAC,CAAC,CAAC;AAE5R;IAAmD,wDAAiE;IAApH;QAAA,qEAuKC;QAxFW,mBAAa,GAAsC,KAAK,CAAC,CAAC;;IAwFtE,CAAC;IAtKG,sBAAY,2DAAS;aAArB,cAA0B,OAAO,gCAAyB,IAAI,CAAC,MAAM,CAAC,YAAY,aAAK,CAAC,CAAC,CAAC;;;OAAA;IAElF,4DAAa,GAArB,UAAsB,UAAgC;QAClD,6BACO,IAAI,CAAC,MAAM,CAAC,YAAY,KAC3B,IAAI,EAAE;gBACF,IAAI,EAAE,UAAU,CAAC,IAAI,CAAC,IAAI;gBAC1B,MAAM,wBAAO,UAAU,CAAC,IAAI,CAAC,MAAM,KAAE,eAAe,EAAE,IAAI,CAAC,MAAM,CAAC,eAAe,GAAE;aACtF,IACH;IACN,CAAC;IAEO,0DAAW,GAAnB,UAAoB,IAA2D;;QAC3E,IAAM,KAAK,GAAG,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,IAAI,EAAE,IAAI,GAAG,KAAK,CAAC,IAAI,CAAC;QACxD,IAAM,OAAO,GAAG,KAAK,CAAC,KAAK,EAAE,CAAC;QAC9B,IAAM,IAAI,GAAG,cAAc,CAAC,uBAAuB,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC;QAEtF,aAAa;QACb,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,SAAS,CAAC,EAAE;YACnD,IAAI,CAAC,gCAAgC,CAAC,SAAS,CAAC,GAAG,OAAO;iBACrD,EAAE,CAAC,IAAI,CAAC;iBACR,KAAK,CAAC,eAAe,CAAC,KAAK,CAAC,4BAA4B,EACrD,EAAE,MAAM,EAAE,gBAAgB,CAAC,MAAM,CAAC,KAAK,EAAE,KAAK,EAAE,gBAAgB,EAAE,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,SAAS,EAAE,CAAC,CAAC,GAAG,CAAC;SACzI;QAED,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAC,EAAE;YACjD,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAC,GAAG,OAAO;iBACnD,EAAE,CAAC,IAAI,CAAC;iBACR,KAAK,CAAC,eAAe,CAAC,KAAK,CAAC,gCAAgC,EACzD,EAAE,UAAU,EAAE,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,KAAK,EAAE,EAAE,KAAK,EAAE,IAAI,CAAC,SAAS,EAAE,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,OAAO,EAAE,CAAC,CAAC,GAAG,CAAC;SACvI;QAED,IAAM,UAAU,GAAG,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC;QAE1C,kBAAkB;QAClB,IAAI,UAAU,CAAC,OAAO,CAAC,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,UAAU,CAAC,EAAE;YACzF,IAAI,CAAC,gCAAgC,CAAC,UAAU,CAAC,GAAG,OAAO;iBACtD,EAAE,CAAC,IAAI,CAAC,gCAAgC,CAAC,SAAS,CAAE,CAAC;iBACrD,KAAK,CAAC,eAAe,CAAC,cAAc,CAAC,yBAAyB,EAAE,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,MAAM,CAAC,YAAY,CAAC,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC;SACjL;QAED,IAAI,UAAU,CAAC,OAAO,CAAC,cAAc,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,QAAQ,CAAC,EAAE;YAC7F,IAAI,CAAC,gCAAgC,CAAC,QAAQ,CAAC,GAAG,OAAO;iBACpD,EAAE,CAAC,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAE,CAAC;iBACnD,KAAK,CAAC,eAAe,CAAC,cAAc,CAAC,yBAAyB,EAAE,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,MAAM,CAAC,kBAAkB,CAAC,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,QAAQ,EAAE,CAAC,CAAC,GAAG,CAAC;SACrL;QAED,IAAI,UAAU,CAAC,OAAO,CAAC,cAAc,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,WAAW,CAAC,IAAI,IAAI,CAAC,GAAG,IAAI,kCAAkC,CAAC,YAAY,CAAC,MAAA,IAAI,CAAC,GAAG,0CAAE,IAAI,CAAC,EAAE;YAC/K,IAAI,CAAC,gCAAgC,CAAC,WAAW,CAAC,GAAG,OAAO;iBACvD,EAAE,CAAC,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAE,CAAC;iBACnD,KAAK,CAAC,eAAe,CAAC,cAAc,CAAC,yBAAyB,EAAE,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,WAAW,EAAE,CAAC,CAAC,GAAG,CAAC;SAC3J;QAED,OAAO,EAAE,KAAK,OAAA,EAAE,OAAO,SAAA,EAAE,IAAI,MAAA,EAAE,CAAC;IACpC,CAAC;IAEO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@@ -82,13 +82,13 @@ export { VolumeStreaming };
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82
82
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// Show selection-box if available and cell otherwise.
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83
83
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'auto': PD.Group({
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84
84
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radius: PD.Numeric(5, { min: 0, max: 50, step: 0.5 }, { description: 'Radius in \u212B within which the volume is shown.' }),
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85
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-
selectionDetailLevel: PD.Select(Math.min(6, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, i + 1
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85
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+
selectionDetailLevel: PD.Select(Math.min(6, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, "".concat(i + 1, " [ ").concat(Math.pow(p.maxVoxels, 1 / 3) | 0, "^3 cells ]")]; }), { label: 'Selection Detail', description: 'Determines the maximum number of voxels. Depending on the size of the volume options are in the range from 0 (0.52M voxels) to 6 (25.17M voxels).' }),
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86
86
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isSelection: PD.Boolean(false, { isHidden: true }),
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87
87
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bottomLeft: PD.Vec3(box.min, {}, { isHidden: true }),
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88
88
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topRight: PD.Vec3(box.max, {}, { isHidden: true }),
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89
89
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}, { description: 'Box around focused element.', isFlat: true })
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90
90
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}, { options: VolumeStreaming.ViewTypeOptions, description: 'Controls what of the volume is displayed. "Off" hides the volume alltogether. "Bounded box" shows the volume inside the given box. "Around Interaction" shows the volume around the focused element/atom. "Whole Structure" shows the volume for the whole structure.' }),
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91
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-
detailLevel: PD.Select(Math.min(3, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, i + 1
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91
|
+
detailLevel: PD.Select(Math.min(3, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, "".concat(i + 1, " [ ").concat(Math.pow(p.maxVoxels, 1 / 3) | 0, "^3 cells ]")]; }), { description: 'Determines the maximum number of voxels. Depending on the size of the volume options are in the range from 0 (0.52M voxels) to 6 (25.17M voxels).' }),
|
|
92
92
|
channels: info.kind === 'em'
|
|
93
93
|
? PD.Group({
|
|
94
94
|
'em': channelParam('EM', Color(0x638F8F), info.emDefaultContourLevel || Volume.IsoValue.relative(1), info.header.sampling[0].valuesInfo[0], channelParams['em'])
|
|
@@ -132,12 +132,12 @@ export { VolumeStreaming };
|
|
|
132
132
|
return __generator(this, function (_a) {
|
|
133
133
|
switch (_a.label) {
|
|
134
134
|
case 0:
|
|
135
|
-
url = urlCombine(this.data.serverUrl, this.info.kind
|
|
135
|
+
url = urlCombine(this.data.serverUrl, "".concat(this.info.kind, "/").concat(this.info.dataId.toLowerCase()));
|
|
136
136
|
if (box) {
|
|
137
137
|
a = box.min, b = box.max;
|
|
138
138
|
url += "/box"
|
|
139
|
-
+
|
|
140
|
-
+
|
|
139
|
+
+ "/".concat(a.map(function (v) { return Math.round(1000 * v) / 1000; }).join(','))
|
|
140
|
+
+ "/".concat(b.map(function (v) { return Math.round(1000 * v) / 1000; }).join(','));
|
|
141
141
|
}
|
|
142
142
|
else {
|
|
143
143
|
url += "/cell";
|
|
@@ -146,7 +146,7 @@ export { VolumeStreaming };
|
|
|
146
146
|
if (this.params.entry.params.view.name === 'auto' && this.params.entry.params.view.params.isSelection) {
|
|
147
147
|
detail = this.params.entry.params.view.params.selectionDetailLevel;
|
|
148
148
|
}
|
|
149
|
-
url += "?detail="
|
|
149
|
+
url += "?detail=".concat(detail);
|
|
150
150
|
entry = LRUCache.get(this.cache, url);
|
|
151
151
|
if (entry)
|
|
152
152
|
return [2 /*return*/, entry.data];
|