@nfdi4plants/arctrl 3.1.1 → 3.2.0

package/dist/ts/ts/Spreadsheet/Metadata/Study.js

@@ -1,15 +1,15 @@
-import { Record } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
-import { ofArray, map, empty, cons, reverse, append, ofSeq } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { Record } from '../../../node_modules/@fable-org/fable-library-ts/Types.js';
+import { ofArray, map, empty, cons, reverse, append, ofSeq } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
 import { Comment$_$reflection } from '../../Core/Comment.js';
-import { stringHash } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
-import { record_type, string_type, list_type } from '../../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { stringHash } from '../../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { record_type, string_type, list_type } from '../../../node_modules/@fable-org/fable-library-ts/Reflection.js';
 import { Comment_fromString, Comment_toString } from './Comment.js';
 import { SparseTable__TryGetValueDefault_5BAE6133, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1, SparseRowModule_fromValues } from './SparseTable.js';
 import { createMissingIdentifier, Study_fileNameFromIdentifier } from '../../Core/Helper/Identifier.js';
-import { addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
-import { defaultArg, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { addToDict } from '../../../node_modules/@fable-org/fable-library-ts/MapUtil.js';
+import { defaultArg, value } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
 import { ResizeArray_iter, Option_fromValueWithDefault } from '../../Core/Helper/Collections.js';
-import { List_distinct } from '../../../node_modules/@fable-org/fable-library-js/Seq2.js';
+import { List_distinct } from '../../../node_modules/@fable-org/fable-library-ts/Seq2.js';
 import { ArcStudy } from '../../Core/ArcTypes.js';
 import { fromRows as fromRows$6, toRows as toRows$1 } from './DesignDescriptors.js';
 import { fromRows as fromRows$5, toRows as toRows$2 } from './Publication.js';
@@ -17,7 +17,7 @@ import { fromRows as fromRows$4, toRows as toRows$3 } from './Factors.js';
 import { fromRows as fromRows$3, toRows as toRows$4 } from './Assays.js';
 import { fromRows as fromRows$2, toRows as toRows$5 } from './Protocols.js';
 import { fromRows as fromRows$1, toRows as toRows$6 } from './Contacts.js';
-import { collect, delay, append as append$1, singleton } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { collect, delay, append as append$1, singleton } from '../../../node_modules/@fable-org/fable-library-ts/Seq.js';
 import { ARCtrl_ArcTable__ArcTable_GetProtocols, ARCtrl_ArcTable__ArcTable_GetProcesses } from '../../Core/Conversion.js';
 import { getFactors } from '../../Core/Process/ProcessSequence.js';
 
@@ -64,7 +64,7 @@ function StudyInfo_ToSparseTable_1680536E(study) {
   }, study.Comments);
   return new SparseTable(matrix.Matrix, matrix.Keys, reverse(List_distinct(commentKeys, {
     Equals: (x, y) => x === y,
-    GetHashCode: stringHash
+    GetHashCode: (x) => stringHash(x) | 0
   })), matrix.ColumnCount);
 }
 function StudyInfo_fromRows(lineNumber, rows) {
@@ -98,7 +98,7 @@ function fromRows(lineNumber, en) {
     loop:
       while (true) {
         const lastLine = lastLine_mut, studyInfo = studyInfo_mut, designDescriptors = designDescriptors_mut, publications = publications_mut, factors = factors_mut, assays = assays_mut, protocols = protocols_mut, contacts = contacts_mut, remarks = remarks_mut, lineNumber_1 = lineNumber_1_mut;
-        let matchResult, k_6, k_7, k_8, k_9, k_10, k_11, k_12;
+        let matchResult = void 0, k_6 = void 0, k_7 = void 0, k_8 = void 0, k_9 = void 0, k_10 = void 0, k_11 = void 0, k_12 = void 0;
         if (lastLine != null) {
           switch (value(lastLine)) {
             case "STUDY DESIGN DESCRIPTORS": {

package/dist/ts/ts/Spreadsheet/Metadata/Workflow.d.ts

@@ -1,10 +1,10 @@
-import { FSharpList } from '@fable-org/fable-library-js/List.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { ArcWorkflow } from '../../Core/ArcTypes.js';
-import { Remark, Comment$ } from '../../Core/Comment.js';
-import { SparseTable } from './SparseTable.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { IEnumerator } from '@fable-org/fable-library-js/Util.js';
+import { FSharpList } from '@fable-org/fable-library-ts/List.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { ArcWorkflow } from '../../Core/ArcTypes.ts';
+import { Remark, Comment$ } from '../../Core/Comment.ts';
+import { SparseTable } from './SparseTable.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { IEnumerator } from '@fable-org/fable-library-ts/Util.ts';
 export declare const identifierLabel = "Identifier";
 export declare const titleLabel = "Title";
 export declare const descriptionLabel = "Description";

package/dist/ts/ts/Spreadsheet/Metadata/Workflow.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"Workflow.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Workflow.ts"],"names":[],"mappings":"AACA,OAAO,EAA6C,UAAU,EAAW,MAAM,qCAAqC,CAAC;AACrH,OAAO,EAAsB,MAAM,EAAS,MAAM,uCAAuC,CAAC;AAO1F,OAAO,EAAE,WAAW,EAAE,MAAM,wBAAwB,CAAC;AACrD,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AAEzD,OAAO,EAA6F,WAAW,EAA+E,MAAM,kBAAkB,CAAC;AACvN,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAI7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,eAAe,eAAe,CAAC;AAE5C,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,gBAAgB,gBAAgB,CAAC;AAE9C,eAAO,MAAM,iBAAiB,SAAS,CAAC;AAExC,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,sBAAsB,yBAAyB,CAAC;AAE7D,eAAO,MAAM,2BAA2B,6BAA6B,CAAC;AAEtE,eAAO,MAAM,QAAQ,QAAQ,CAAC;AAE9B,eAAO,MAAM,YAAY,YAAY,CAAC;AAEtC,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,kCAAkC,qCAAqC,CAAC;AAErF,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,sCAAsC,0CAA0C,CAAC;AAE9F,eAAO,MAAM,gCAAgC,oCAAoC,CAAC;AAElF,eAAO,MAAM,aAAa,cAAc,CAAC;AAEzC,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAoZ,CAAC;AAE3b,wBAAgB,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,YAAY,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,+BAA+B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,yBAAyB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,sBAAsB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,cAAc,EAAE,MAAM,EAAE,6BAA6B,EAAE,MAAM,EAAE,uBAAuB,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,iCAAiC,EAAE,MAAM,EAAE,2BAA2B,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,WAAW,CAiCtlB;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,WAAW,CAGhE;AAED,wBAAgB,aAAa,CAAC,QAAQ,EAAE,WAAW,GAAG,WAAW,CAqChE;AAED,wBAAgB,QAAQ,CAAC,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,CAGlJ;AAED,wBAAgB,MAAM,CAAC,QAAQ,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAEjF"}

package/dist/ts/ts/Spreadsheet/Metadata/Workflow.js

@@ -1,6 +1,6 @@
-import { ofArray, map as map$1, empty, ofSeq, cons, reverse } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { value, unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
-import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { ofArray, map as map$1, empty, ofSeq, cons, reverse } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
+import { value, unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { map } from '../../../node_modules/@fable-org/fable-library-ts/Seq.js';
 import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
 import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
 import { OntologyAnnotation_fromAggregatedStrings, Component_fromAggregatedStrings, OntologyAnnotation_toAggregatedStrings, Component_toAggregatedStrings } from './Conversions.js';
@@ -8,10 +8,10 @@ import { createMissingIdentifier, Workflow_tryIdentifierFromFileName, Workflow_f
 import { ArcWorkflow } from '../../Core/ArcTypes.js';
 import { Comment_fromString, Comment_toString } from './Comment.js';
 import { SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1 } from './SparseTable.js';
-import { join } from '../../../node_modules/@fable-org/fable-library-js/String.js';
-import { addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
-import { List_distinct } from '../../../node_modules/@fable-org/fable-library-js/Seq2.js';
-import { stringHash } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
+import { join } from '../../../node_modules/@fable-org/fable-library-ts/String.js';
+import { addToDict } from '../../../node_modules/@fable-org/fable-library-ts/MapUtil.js';
+import { List_distinct } from '../../../node_modules/@fable-org/fable-library-ts/Seq2.js';
+import { stringHash } from '../../../node_modules/@fable-org/fable-library-ts/Util.js';
 
 const identifierLabel = "Identifier";
 const titleLabel = "Title";
@@ -101,7 +101,7 @@ function toSparseTable(workflow) {
   }, workflow.Comments);
   return new SparseTable(matrix.Matrix, matrix.Keys, reverse(List_distinct(commentKeys, {
     Equals: (x, y) => x === y,
-    GetHashCode: stringHash
+    GetHashCode: (x) => stringHash(x) | 0
   })), matrix.ColumnCount);
 }
 function fromRows(lineNumber, rows) {

package/dist/ts/ts/Template.Web.d.ts

@@ -1,11 +1,15 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Async } from '@fable-org/fable-library-js/AsyncBuilder.js';
-import { Template } from './Core/Template.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-export declare function getTemplates(url: Option<string>): Async<Template[]>;
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Async } from '@fable-org/fable-library-ts/AsyncBuilder.ts';
+import { MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { Template } from './Core/Template.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+export declare function getTemplates(url: Option<string>): Async<MutableArray<Template>>;
+/**
+ * This class is used to make async functions more accessible from JavaScript.
+ */
 export declare class WebController {
     constructor();
-    static getTemplates(url: Option<string>): Promise<Template[]>;
+    static getTemplates(url: Option<string>): Promise<MutableArray<Template>>;
 }
 export declare function WebController_$reflection(): TypeInfo;
 //# sourceMappingURL=Template.Web.d.ts.map

package/dist/ts/ts/Template.Web.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Template.Web.d.ts","sourceRoot":"","sources":["../../../src/ARCtrl/ts/Template.Web.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAc,MAAM,uCAAuC,CAAC;AAC3E,OAAO,EAAE,KAAK,EAAa,MAAM,6CAA6C,CAAC;AAG/E,OAAO,EAAE,QAAQ,EAAE,MAAM,oBAAoB,CAAC;AAE9C,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,wBAAgB,YAAY,CAAC,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,KAAK,CAAC,QAAQ,EAAE,CAAC,CAMnE;AAED,qBAAa,aAAa;;IAGtB,MAAM,CAAC,YAAY,CAAC,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,OAAO,CAAC,QAAQ,EAAE,CAAC;CAGhE;AAED,wBAAgB,yBAAyB,IAAI,QAAQ,CAEpD"}
+{"version":3,"file":"Template.Web.d.ts","sourceRoot":"","sources":["../../../src/ARCtrl/ts/Template.Web.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,MAAM,EAAc,MAAM,uCAAuC,CAAC;AAC3E,OAAO,EAAE,KAAK,EAAa,MAAM,6CAA6C,CAAC;AAG/E,OAAO,EAAE,YAAY,EAAE,MAAM,qCAAqC,CAAC;AACnE,OAAO,EAAE,QAAQ,EAAE,MAAM,oBAAoB,CAAC;AAE9C,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,wBAAgB,YAAY,CAAC,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC,CAM/E;AAED;;GAEG;AACH,qBAAa,aAAa;;IAGtB,MAAM,CAAC,YAAY,CAAC,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,OAAO,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC;CAG5E;AAED,wBAAgB,yBAAyB,IAAI,QAAQ,CAEpD"}

package/dist/ts/ts/Template.Web.js

@@ -1,9 +1,9 @@
-import { defaultArg } from '../node_modules/@fable-org/fable-library-js/Option.js';
-import { singleton } from '../node_modules/@fable-org/fable-library-js/AsyncBuilder.js';
+import { defaultArg } from '../node_modules/@fable-org/fable-library-ts/Option.js';
+import { singleton } from '../node_modules/@fable-org/fable-library-ts/AsyncBuilder.js';
 import { downloadFile } from './WebRequest/WebRequest.js';
 import { Templates_fromJsonString } from './JsonIO/Table/Templates.js';
-import { startAsPromise } from '../node_modules/@fable-org/fable-library-js/Async.js';
-import { class_type } from '../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { startAsPromise } from '../node_modules/@fable-org/fable-library-ts/Async.js';
+import { class_type } from '../node_modules/@fable-org/fable-library-ts/Reflection.js';
 
 function getTemplates(url) {
   const url_1 = defaultArg(url, "https://github.com/nfdi4plants/Swate-templates/releases/download/latest/templates_v2.0.0.json");

package/dist/ts/ts/ValidationPackages/ValidationPackage.d.ts

@@ -1,6 +1,6 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
 export declare class ValidationPackage {
     readonly version: Option<string>;
     _name: string;
@@ -12,6 +12,9 @@ export declare class ValidationPackage {
     set Version(version: Option<string>);
     static make(name: string, version: Option<string>): ValidationPackage;
     Copy(): ValidationPackage;
+    /**
+     * Pretty printer
+     */
     toString(): string;
     Equals(obj: any): boolean;
     GetHashCode(): int32;

package/dist/ts/ts/ValidationPackages/ValidationPackage.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"ValidationPackage.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/ValidationPackages/ValidationPackage.ts"],"names":[],"mappings":"AACA,OAAO,EAAoB,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAKzF,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,iBAAiB;IAC1B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACjC,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACb,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM;IAK1C,IAAI,IAAI,IAAI,MAAM,CAGjB;IACD,IAAI,IAAI,CAAC,IAAI,EAAE,MAAM,EAGpB;IACD,IAAI,OAAO,IAAI,MAAM,GAAG,SAAS,CAGhC;IACD,IAAI,OAAO,CAAC,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,EAGlC;IACD,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,iBAAiB;IAGrE,IAAI,IAAI,iBAAiB;IAMzB;;OAEG;IACH,QAAQ,IAAI,MAAM;IAIlB,MAAM,CAAC,GAAG,EAAE,GAAG,GAAG,OAAO;IAKzB,WAAW,IAAI,KAAK;CAIvB;AAED,wBAAgB,6BAA6B,IAAI,QAAQ,CAExD;AAED,wBAAgB,gCAAgC,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,iBAAiB,CAElG"}

package/dist/ts/ts/ValidationPackages/ValidationPackage.js

@@ -1,9 +1,9 @@
-import { unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { join } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { toList, delay, append, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { equals, stringHash } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { unwrap, value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { join, concat } from '../../node_modules/@fable-org/fable-library-ts/String.js';
+import { toList, delay, append, singleton, empty } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
+import { equals, stringHash } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
 import { boxHashArray, boxHashOption } from '../Core/Helper/HashCodes.js';
-import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { class_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
 
 class ValidationPackage {
   constructor(name, version) {
@@ -36,12 +36,15 @@ class ValidationPackage {
     const version = this$.Version;
     return ValidationPackage.make(name, version);
   }
+  /**
+   * Pretty printer
+   */
   toString() {
     const this$ = this;
-    return join("\n", toList(delay(() => append(singleton("{"), delay(() => append(singleton(` Name = ${this$.Name}`), delay(() => append(this$.version != null ? singleton(` Version = ${value(this$.Version)}`) : empty(), delay(() => singleton("}"))))))))));
+    return join("\n", toList(delay(() => append(singleton("{"), delay(() => append(singleton(concat(" Name = ", this$.Name)), delay(() => append(this$.version != null ? singleton(concat(" Version = ", value(this$.Version))) : empty(), delay(() => singleton("}"))))))))));
   }
   Equals(obj) {
-    let other_vp;
+    let other_vp = void 0;
     const this$ = this;
     return obj instanceof ValidationPackage && (other_vp = obj, other_vp.Name === this$.Name && equals(other_vp.Version, this$.Version));
   }

package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.d.ts

@@ -1,7 +1,7 @@
-import { ValidationPackage } from './ValidationPackage.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { ValidationPackage } from './ValidationPackage.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
 export declare class ValidationPackagesConfig {
     _arc_specification: Option<string>;
     _validation_packages: ValidationPackage[];
@@ -12,6 +12,9 @@ export declare class ValidationPackagesConfig {
     set ARCSpecification(arc_specification: Option<string>);
     static make(validation_packages: ValidationPackage[], arc_specification: Option<string>): ValidationPackagesConfig;
     Copy(): ValidationPackagesConfig;
+    /**
+     * Pretty printer
+     */
     toString(): string;
     StructurallyEquals(other: ValidationPackagesConfig): boolean;
     ReferenceEquals(other: ValidationPackagesConfig): boolean;

package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ValidationPackagesConfig.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/ValidationPackages/ValidationPackagesConfig.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAC;AAC3D,OAAO,EAAS,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAM9E,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,wBAAwB;IACjC,kBAAkB,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACnC,oBAAoB,EAAE,iBAAiB,EAAE,CAAC;gBAC9B,mBAAmB,EAAE,iBAAiB,EAAE,EAAE,iBAAiB,CAAC,EAAE,MAAM;IAIhF,IAAI,kBAAkB,IAAI,iBAAiB,EAAE,CAG5C;IACD,IAAI,kBAAkB,CAAC,mBAAmB,EAAE,iBAAiB,EAAE,EAG9D;IACD,IAAI,gBAAgB,IAAI,MAAM,GAAG,SAAS,CAGzC;IACD,IAAI,gBAAgB,CAAC,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,EAGrD;IACD,MAAM,CAAC,IAAI,CAAC,mBAAmB,EAAE,iBAAiB,EAAE,EAAE,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,wBAAwB;IAGlH,IAAI,IAAI,wBAAwB;IAMhC,QAAQ,IAAI,MAAM;IAIlB,kBAAkB,CAAC,KAAK,EAAE,wBAAwB,GAAG,OAAO;IAqB5D,eAAe,CAAC,KAAK,EAAE,wBAAwB,GAAG,OAAO;IAIzD,MAAM,CAAC,KAAK,EAAE,GAAG,GAAG,OAAO;IAK3B,WAAW,IAAI,KAAK;CAIvB;AAED,wBAAgB,oCAAoC,IAAI,QAAQ,CAE/D;AAED,wBAAgB,uCAAuC,CAAC,mBAAmB,EAAE,iBAAiB,EAAE,EAAE,iBAAiB,CAAC,EAAE,MAAM,GAAG,wBAAwB,CAEtJ"}
+{"version":3,"file":"ValidationPackagesConfig.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/ValidationPackages/ValidationPackagesConfig.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAC;AAC3D,OAAO,EAAS,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAM9E,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,wBAAwB;IACjC,kBAAkB,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACnC,oBAAoB,EAAE,iBAAiB,EAAE,CAAC;gBAC9B,mBAAmB,EAAE,iBAAiB,EAAE,EAAE,iBAAiB,CAAC,EAAE,MAAM;IAIhF,IAAI,kBAAkB,IAAI,iBAAiB,EAAE,CAG5C;IACD,IAAI,kBAAkB,CAAC,mBAAmB,EAAE,iBAAiB,EAAE,EAG9D;IACD,IAAI,gBAAgB,IAAI,MAAM,GAAG,SAAS,CAGzC;IACD,IAAI,gBAAgB,CAAC,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,EAGrD;IACD,MAAM,CAAC,IAAI,CAAC,mBAAmB,EAAE,iBAAiB,EAAE,EAAE,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,wBAAwB;IAGlH,IAAI,IAAI,wBAAwB;IAMhC;;OAEG;IACH,QAAQ,IAAI,MAAM;IAOlB,kBAAkB,CAAC,KAAK,EAAE,wBAAwB,GAAG,OAAO;IAmB5D,eAAe,CAAC,KAAK,EAAE,wBAAwB,GAAG,OAAO;IAIzD,MAAM,CAAC,KAAK,EAAE,GAAG,GAAG,OAAO;IAK3B,WAAW,IAAI,KAAK;CAIvB;AAED,wBAAgB,oCAAoC,IAAI,QAAQ,CAE/D;AAED,wBAAgB,uCAAuC,CAAC,mBAAmB,EAAE,iBAAiB,EAAE,EAAE,iBAAiB,CAAC,EAAE,MAAM,GAAG,wBAAwB,CAEtJ"}

package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.js

@@ -1,12 +1,12 @@
-import { unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { join } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { toList, delay, append, singleton, empty, map, fold, length, item } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { toString } from '../../node_modules/@fable-org/fable-library-js/Types.js';
-import { sortBy } from '../../node_modules/@fable-org/fable-library-js/Array.js';
-import { compareArrays, equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { rangeDouble } from '../../node_modules/@fable-org/fable-library-js/Range.js';
+import { unwrap, value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { join, concat } from '../../node_modules/@fable-org/fable-library-ts/String.js';
+import { toList, delay, append, singleton, empty, map, fold, length, item } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
+import { toString } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
+import { sortBy } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
+import { compareArrays, equals } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { rangeDouble } from '../../node_modules/@fable-org/fable-library-ts/Range.js';
 import { boxHashArray, boxHashOption, boxHashSeq } from '../Core/Helper/HashCodes.js';
-import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { class_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
 
 class ValidationPackagesConfig {
   constructor(validation_packages, arc_specification) {
@@ -38,35 +38,40 @@ class ValidationPackagesConfig {
     const arc_specification = this$.ARCSpecification;
     return ValidationPackagesConfig.make(validation_packages, arc_specification);
   }
+  /**
+   * Pretty printer
+   */
   toString() {
     const this$ = this;
-    return join("\n", toList(delay(() => append(singleton("{"), delay(() => append(this$.ARCSpecification != null ? singleton(` ARCSpecification = ${value(this$.ARCSpecification)}`) : empty(), delay(() => append(singleton(" ValidationPackages = ["), delay(() => append(singleton(join(`;${"\n"}`, map(toString, this$.ValidationPackages))), delay(() => append(singleton("]"), delay(() => singleton("}"))))))))))))));
+    return join("\n", toList(delay(() => append(singleton("{"), delay(() => append(this$.ARCSpecification != null ? singleton(concat(" ARCSpecification = ", value(this$.ARCSpecification))) : empty(), delay(() => append(singleton(" ValidationPackages = ["), delay(() => {
+      let strings = void 0;
+      return append(singleton((strings = map(toString, this$.ValidationPackages), join(concat(";", "\n"), strings))), delay(() => append(singleton("]"), delay(() => singleton("}")))));
+    })))))))));
   }
   StructurallyEquals(other) {
     const this$ = this;
     const sort = (arg) => sortBy((vp) => [vp.Name, vp.Version], Array.from(arg), {
-      Compare: compareArrays
+      Compare: (x, y) => compareArrays(x, y) | 0
     });
-    if (equals(this$.ARCSpecification, other.ARCSpecification)) {
-      const a = sort(this$.ValidationPackages);
-      const b = sort(other.ValidationPackages);
-      return length(a) === length(b) && fold((acc, e) => {
-        if (acc) {
-          return e;
-        } else {
-          return false;
-        }
-      }, true, toList(delay(() => map((i) => equals(item(i, a), item(i, b)), rangeDouble(0, 1, length(a) - 1)))));
-    } else {
-      return false;
-    }
+    const specs = equals(this$.ARCSpecification, other.ARCSpecification);
+    let packages;
+    const a = sort(this$.ValidationPackages);
+    const b = sort(other.ValidationPackages);
+    packages = length(a) === length(b) && fold((acc, e) => {
+      if (acc) {
+        return e;
+      } else {
+        return false;
+      }
+    }, true, toList(delay(() => map((i) => equals(item(i, a), item(i, b)), rangeDouble(0, 1, length(a) - 1)))));
+    return specs && packages;
   }
   ReferenceEquals(other) {
     const this$ = this;
     return this$ === other;
   }
   Equals(other) {
-    let other_vp;
+    let other_vp = void 0;
     const this$ = this;
     return other instanceof ValidationPackagesConfig && (other_vp = other, this$.StructurallyEquals(other_vp));
   }

package/dist/ts/ts/WebRequest/WebRequest.Node.d.ts

@@ -1,4 +1,4 @@
-import { Async } from '@fable-org/fable-library-js/AsyncBuilder.js';
+import { Async } from '@fable-org/fable-library-ts/AsyncBuilder.ts';
 export declare function isNode<$a>(): $a;
 export declare function downloadFile(url: string): Async<string>;
 //# sourceMappingURL=WebRequest.Node.d.ts.map

package/dist/ts/ts/WebRequest/WebRequest.Node.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"WebRequest.Node.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WebRequest/WebRequest.Node.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,KAAK,EAAE,MAAM,6CAA6C,CAAC;AAEpE,wBAAgB,MAAM,CAAC,EAAE,KAAK,EAAE,CAI/B;AAED,wBAAgB,YAAY,CAAC,GAAG,EAAE,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC,CAGvD"}
+{"version":3,"file":"WebRequest.Node.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WebRequest/WebRequest.Node.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,KAAK,EAAE,MAAM,6CAA6C,CAAC;AAEpE,wBAAgB,MAAM,CAAC,EAAE,KAAK,EAAE,CAI/B;AAED,wBAAgB,YAAY,CAAC,GAAG,EAAE,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC,CAGvD"}

package/dist/ts/ts/WebRequest/WebRequest.Node.js

@@ -1,13 +1,13 @@
-import { awaitPromise } from '../../node_modules/@fable-org/fable-library-js/Async.js';
-import { fetch$ } from '../fable_modules/Fable.Fetch.2.6.0/Fetch.fs.js';
-import { empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { awaitPromise } from '../../node_modules/@fable-org/fable-library-ts/Async.js';
+import { fetch$ } from '../fable_modules/Fable.Fetch.2.7.0/Fetch.fs.js';
+import { empty } from '../../node_modules/@fable-org/fable-library-ts/List.js';
 
 function isNode() {
   return typeof process !== "undefined" && process.versions != null && process.versions.node != null;
   ;
 }
 function downloadFile(url) {
-  let pr_1, pr;
+  let pr_1 = void 0, pr = void 0;
   return awaitPromise((pr_1 = (pr = fetch$(url, empty()), pr.then((res) => res.text())), pr_1.then((txt) => txt)));
 }
 

package/dist/ts/ts/WebRequest/WebRequest.d.ts

@@ -1,3 +1,3 @@
-import { Async } from '@fable-org/fable-library-js/AsyncBuilder.js';
+import { Async } from '@fable-org/fable-library-ts/AsyncBuilder.ts';
 export declare function downloadFile(url: string): Async<string>;
 //# sourceMappingURL=WebRequest.d.ts.map

package/dist/ts/ts/WebRequest/WebRequest.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"WebRequest.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WebRequest/WebRequest.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,KAAK,EAAa,MAAM,6CAA6C,CAAC;AAI/E,OAAO,kBAAkB,CAAC;AAE1B,wBAAgB,YAAY,CAAC,GAAG,EAAE,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC,CAWvD"}
+{"version":3,"file":"WebRequest.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WebRequest/WebRequest.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,KAAK,EAAa,MAAM,6CAA6C,CAAC;AAI/E,OAAO,kBAAkB,CAAC;AAE1B,wBAAgB,YAAY,CAAC,GAAG,EAAE,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC,CAWvD"}

package/dist/ts/ts/WebRequest/WebRequest.js

@@ -1,7 +1,7 @@
 import { isNode, downloadFile as downloadFile$1 } from './WebRequest.Node.js';
-import { singleton } from '../../node_modules/@fable-org/fable-library-js/AsyncBuilder.js';
-import { Http_get } from '../fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.js';
-import { toFail, printf } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { singleton } from '../../node_modules/@fable-org/fable-library-ts/AsyncBuilder.js';
+import { Http_get } from '../fable_modules/Fable.SimpleHttp.3.6.0/Http.fs.js';
+import { toFail, printf } from '../../node_modules/@fable-org/fable-library-ts/String.js';
 import 'isomorphic-fetch';
 
 function downloadFile(url) {

package/dist/ts/ts/WorkflowGraph/Adapters.d.ts

@@ -1,9 +1,9 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { ArcRun, ArcWorkflow, ArcInvestigation } from '../Core/ArcTypes.js';
-import { FSharpMap } from '@fable-org/fable-library-js/Map.js';
-import { CWLProcessingUnit_$union } from '../CWL/CWLProcessingUnit.js';
-import { WorkflowGraphIndex, WorkflowGraph, GraphBuildIssue } from './GraphTypes.js';
-import { FSharpResult$2_$union } from '@fable-org/fable-library-js/Result.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { ArcRun, ArcWorkflow, ArcInvestigation } from '../Core/ArcTypes.ts';
+import { FSharpMap } from '@fable-org/fable-library-ts/Map.ts';
+import { CWLProcessingUnit_$union } from '../CWL/CWLProcessingUnit.ts';
+import { WorkflowGraphIndex, WorkflowGraph, GraphBuildIssue } from './GraphTypes.ts';
+import { FSharpResult$2_$union } from '@fable-org/fable-library-ts/Result.ts';
 /**
  * Builds a lookup map of normalized CWL file paths to processing units from all workflows and runs in an investigation.
  */

package/dist/ts/ts/WorkflowGraph/Adapters.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Adapters.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WorkflowGraph/Adapters.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAS,MAAM,uCAAuC,CAAC;AACtE,OAAO,EAAE,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAC5E,OAAO,EAAoB,SAAS,EAA2B,MAAM,oCAAoC,CAAC;AAG1G,OAAO,EAAE,wBAAwB,EAAE,MAAM,6BAA6B,CAAC;AAIvE,OAAO,EAAE,kBAAkB,EAAsC,aAAa,EAAE,eAAe,EAA0E,MAAM,iBAAiB,CAAC;AAGjM,OAAO,EAAE,qBAAqB,EAA2C,MAAM,uCAAuC,CAAC;AAEvH;;GAEG;AACH,wBAAgB,gCAAgC,CAAC,aAAa,EAAE,MAAM,CAAC,gBAAgB,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,wBAAwB,CAAC,CA8BrI;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,CAAC,MAAM,EAAE,wBAAwB,CAAC,GAAG,MAAM,CAAC,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,MAAM,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAOhJ;AAED;;GAEG;AACH,wBAAgB,6BAA6B,CAAC,EAAE,EAAE,UAAU,EAAE,MAAM,EAAE,SAAS,EAAE,EAAE,GAAG,eAAe,CAEpG;AAED;;;;GAIG;AACH,wBAAgB,UAAU,CAAC,QAAQ,EAAE,WAAW,GAAG,qBAAqB,CAAC,aAAa,EAAE,eAAe,CAAC,CAUvG;AAED;;;;GAIG;AACH,wBAAgB,KAAK,CAAC,GAAG,EAAE,MAAM,GAAG,qBAAqB,CAAC,aAAa,EAAE,eAAe,CAAC,CAUxF;AAED;;;GAGG;AACH,wBAAgB,eAAe,CAAC,aAAa,EAAE,gBAAgB,GAAG,kBAAkB,CAwBnF"}
+{"version":3,"file":"Adapters.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WorkflowGraph/Adapters.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,MAAM,EAAS,MAAM,uCAAuC,CAAC;AACtE,OAAO,EAAE,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAC5E,OAAO,EAAoB,SAAS,EAA2B,MAAM,oCAAoC,CAAC;AAG1G,OAAO,EAAE,wBAAwB,EAAE,MAAM,6BAA6B,CAAC;AAIvE,OAAO,EAAE,kBAAkB,EAAsC,aAAa,EAAE,eAAe,EAAoD,MAAM,iBAAiB,CAAC;AAG3K,OAAO,EAAE,qBAAqB,EAA4C,MAAM,uCAAuC,CAAC;AAExH;;GAEG;AACH,wBAAgB,gCAAgC,CAAC,aAAa,EAAE,MAAM,CAAC,gBAAgB,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,wBAAwB,CAAC,CA8BrI;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,CAAC,MAAM,EAAE,wBAAwB,CAAC,GAAG,MAAM,CAAC,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,MAAM,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAOhJ;AAED;;GAEG;AACH,wBAAgB,6BAA6B,CAAC,EAAE,EAAE,UAAU,EAAE,MAAM,EAAE,SAAS,EAAE,EAAE,GAAG,eAAe,CAEpG;AAED;;;;GAIG;AACH,wBAAgB,UAAU,CAAC,QAAQ,EAAE,WAAW,GAAG,qBAAqB,CAAC,aAAa,EAAE,eAAe,CAAC,CAUvG;AAED;;;;GAIG;AACH,wBAAgB,KAAK,CAAC,GAAG,EAAE,MAAM,GAAG,qBAAqB,CAAC,aAAa,EAAE,eAAe,CAAC,CAUxF;AAED;;;GAGG;AACH,wBAAgB,eAAe,CAAC,aAAa,EAAE,gBAAgB,GAAG,kBAAkB,CAwBnF"}

package/dist/ts/ts/WorkflowGraph/Adapters.js

@@ -1,13 +1,13 @@
-import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { ofSeq, empty as empty$1, isEmpty, tryFind } from '../../node_modules/@fable-org/fable-library-js/Map.js';
-import { map, delay, append, collect, empty, singleton } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { ofSeq, empty as empty$1, isEmpty, tryFind } from '../../node_modules/@fable-org/fable-library-ts/Map.js';
+import { map, delay, append, collect, empty, singleton } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
 import { normalizePathKey } from '../FileSystem/Path.js';
 import { Workflow_cwlFileNameFromIdentifier, Run_cwlFileNameFromIdentifier } from '../Core/Helper/Identifier.js';
-import { comparePrimitives, getEnumerator, disposeSafe } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { GraphBuildIssue_create_Z2F3B511A, GraphIssueKind_MissingCwlDescription, WorkflowGraphIndex_create_56E060E0 } from './GraphTypes.js';
+import { comparePrimitives, getEnumerator, disposeSafe } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { GraphBuildIssue_create_Z2F3B511A, GraphIssueKind, WorkflowGraphIndex_create_56E060E0 } from './GraphTypes.js';
 import { buildWith } from './Builder.js';
 import { WorkflowGraphBuildOptionsModule_withRootWorkflowFilePath, WorkflowGraphBuildOptionsModule_withRootScope, WorkflowGraphBuildOptionsModule_defaultOptions, WorkflowGraphBuildOptionsModule_withTryResolveRunPath } from './BuildOptions.js';
-import { FSharpResult$2_Ok, FSharpResult$2_Error } from '../../node_modules/@fable-org/fable-library-js/Result.js';
+import { FSharpResult$2_Ok, FSharpResult$2_Error$ } from '../../node_modules/@fable-org/fable-library-ts/Result.js';
 
 function createCwlLookupFromInvestigation(investigation) {
   if (investigation != null) {
@@ -29,11 +29,11 @@ function createCwlLookupFromInvestigation(investigation) {
         return singleton([Run_cwlFileNameFromIdentifier(run.Identifier), cwl_1]);
       }
     }, inv.Runs))))), {
-      Compare: comparePrimitives
+      Compare: (x_1, y_1) => comparePrimitives(x_1, y_1) | 0
     });
   } else {
     return empty$1({
-      Compare: comparePrimitives
+      Compare: (x, y) => comparePrimitives(x, y) | 0
     });
   }
 }
@@ -45,26 +45,26 @@ function createResolver(lookup) {
   }
 }
 function createMissingDescriptionError(identifier, scopeType) {
-  return GraphBuildIssue_create_Z2F3B511A(GraphIssueKind_MissingCwlDescription(), `No CWLDescription available for ${scopeType} '${identifier}'.`, identifier);
+  return GraphBuildIssue_create_Z2F3B511A(GraphIssueKind.MissingCwlDescription, `No CWLDescription available for ${scopeType} '${identifier}'.`, identifier);
 }
 function ofWorkflow(workflow) {
-  let options_2, options_1;
+  let options_2 = void 0, options_1 = void 0;
   const matchValue = workflow.CWLDescription;
   if (matchValue != null) {
     const processingUnit = value(matchValue);
     return FSharpResult$2_Ok(buildWith((options_2 = (options_1 = WorkflowGraphBuildOptionsModule_withRootScope(workflow.Identifier, WorkflowGraphBuildOptionsModule_defaultOptions), WorkflowGraphBuildOptionsModule_withRootWorkflowFilePath(Workflow_cwlFileNameFromIdentifier(workflow.Identifier), options_1)), WorkflowGraphBuildOptionsModule_withTryResolveRunPath(createResolver(createCwlLookupFromInvestigation(workflow.Investigation)), options_2)), processingUnit));
   } else {
-    return FSharpResult$2_Error(createMissingDescriptionError(workflow.Identifier, "workflow"));
+    return FSharpResult$2_Error$(createMissingDescriptionError(workflow.Identifier, "workflow"));
   }
 }
 function ofRun(run) {
-  let options_2, options_1;
+  let options_2 = void 0, options_1 = void 0;
   const matchValue = run.CWLDescription;
   if (matchValue != null) {
     const processingUnit = value(matchValue);
     return FSharpResult$2_Ok(buildWith((options_2 = (options_1 = WorkflowGraphBuildOptionsModule_withRootScope(run.Identifier, WorkflowGraphBuildOptionsModule_defaultOptions), WorkflowGraphBuildOptionsModule_withRootWorkflowFilePath(Run_cwlFileNameFromIdentifier(run.Identifier), options_1)), WorkflowGraphBuildOptionsModule_withTryResolveRunPath(createResolver(createCwlLookupFromInvestigation(run.Investigation)), options_2)), processingUnit));
   } else {
-    return FSharpResult$2_Error(createMissingDescriptionError(run.Identifier, "run"));
+    return FSharpResult$2_Error$(createMissingDescriptionError(run.Identifier, "run"));
   }
 }
 function ofInvestigation(investigation) {

package/dist/ts/ts/WorkflowGraph/BuildOptions.d.ts

@@ -1,7 +1,10 @@
-import { Record } from '@fable-org/fable-library-js/Types.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { CWLProcessingUnit_$union } from '../CWL/CWLProcessingUnit.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { Record } from '@fable-org/fable-library-ts/Types.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { CWLProcessingUnit_$union } from '../CWL/CWLProcessingUnit.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+/**
+ * Configuration record controlling how workflow graphs are built from CWL processing units.
+ */
 export declare class WorkflowGraphBuildOptions extends Record {
     readonly RootScope: string;
     readonly RootWorkflowFilePath: Option<string>;

package/dist/ts/ts/WorkflowGraph/BuildOptions.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"BuildOptions.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WorkflowGraph/BuildOptions.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,MAAM,EAAE,MAAM,sCAAsC,CAAC;AAC9D,OAAO,EAAE,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAC/D,OAAO,EAAiC,wBAAwB,EAAE,MAAM,6BAA6B,CAAC;AACtG,OAAO,EAAiE,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEpI;;GAEG;AACH,qBAAa,yBAA0B,SAAQ,MAAM;IACjD,QAAQ,CAAC,SAAS,EAAE,MAAM,CAAC;IAC3B,QAAQ,CAAC,oBAAoB,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IAC9C,QAAQ,CAAC,iBAAiB,EAAE,MAAM,CAAC,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,MAAM,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAAC;IACzF,QAAQ,CAAC,6BAA6B,EAAE,OAAO,CAAC;IAChD,QAAQ,CAAC,qBAAqB,EAAE,OAAO,CAAC;gBAC5B,SAAS,EAAE,MAAM,EAAE,oBAAoB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,iBAAiB,EAAE,MAAM,CAAC,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,MAAM,CAAC,wBAAwB,CAAC,CAAC,CAAC,EAAE,6BAA6B,EAAE,OAAO,EAAE,qBAAqB,EAAE,OAAO;CAQ/N;AAED,wBAAgB,qCAAqC,IAAI,QAAQ,CAEhE;AAED,eAAO,MAAM,8CAA8C,EAAE,yBAAoG,CAAC;AAElK;;GAEG;AACH,wBAAgB,6CAA6C,CAAC,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,yBAAyB,GAAG,yBAAyB,CAE9I;AAED;;GAEG;AACH,wBAAgB,wDAAwD,CAAC,oBAAoB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,yBAAyB,GAAG,yBAAyB,CAE5K;AAED;;GAEG;AACH,wBAAgB,qDAAqD,CAAC,iBAAiB,EAAE,MAAM,CAAC,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,MAAM,CAAC,wBAAwB,CAAC,CAAC,CAAC,EAAE,OAAO,EAAE,yBAAyB,GAAG,yBAAyB,CAEpN;AAED;;;GAGG;AACH,wBAAgB,iEAAiE,CAAC,MAAM,EAAE,OAAO,EAAE,OAAO,EAAE,yBAAyB,GAAG,yBAAyB,CAEhK;AAED;;;GAGG;AACH,wBAAgB,yDAAyD,CAAC,qBAAqB,EAAE,OAAO,EAAE,OAAO,EAAE,yBAAyB,GAAG,yBAAyB,CAEvK"}

package/dist/ts/ts/WorkflowGraph/BuildOptions.js

@@ -1,6 +1,6 @@
-import { Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { Record } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
 import { CWLProcessingUnit_$reflection } from '../CWL/CWLProcessingUnit.js';
-import { record_type, string_type, option_type, bool_type, lambda_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { record_type, string_type, option_type, bool_type, lambda_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
 
 class WorkflowGraphBuildOptions extends Record {
   constructor(RootScope, RootWorkflowFilePath, TryResolveRunPath, StrictUnresolvedRunReferences, ExpandNestedWorkflows) {

package/dist/ts/ts/WorkflowGraph/Builder.d.ts

@@ -1,19 +1,22 @@
-import { Record } from '@fable-org/fable-library-js/Types.js';
-import { PortDirection_$union, ProcessingUnitKind_$union, EdgeKind_$union, WorkflowGraphEdge, WorkflowGraphNode, GraphIssueKind_$union, WorkflowGraph } from './GraphTypes.js';
-import { FSharpSet } from '@fable-org/fable-library-js/Set.js';
-import { FSharpMap } from '@fable-org/fable-library-js/Map.js';
-import { WorkflowStep, WorkflowStepRun_$union } from '../CWL/WorkflowSteps.js';
-import { WorkflowGraphBuildOptions } from './BuildOptions.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { IEquatable } from '@fable-org/fable-library-js/Util.js';
-import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
-import { FSharpList } from '@fable-org/fable-library-js/List.js';
-import { CWLWorkflowDescription } from '../CWL/WorkflowDescription.js';
-import { CWLToolDescription } from '../CWL/ToolDescription.js';
-import { CWLExpressionToolDescription } from '../CWL/ExpressionToolDescription.js';
-import { CWLOperationDescription } from '../CWL/OperationDescription.js';
-import { CWLProcessingUnit_$union } from '../CWL/CWLProcessingUnit.js';
+import { Record } from '@fable-org/fable-library-ts/Types.ts';
+import { PortDirection_$union, ProcessingUnitKind_$union, EdgeKind_$union, WorkflowGraphEdge, WorkflowGraphNode, GraphIssueKind_$union, WorkflowGraph } from './GraphTypes.ts';
+import { FSharpSet } from '@fable-org/fable-library-ts/Set.ts';
+import { FSharpMap } from '@fable-org/fable-library-ts/Map.ts';
+import { WorkflowStep, WorkflowStepRun_$union } from '../CWL/WorkflowSteps.ts';
+import { WorkflowGraphBuildOptions } from './BuildOptions.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { IEquatable, MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { DynamicObj } from '../fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js';
+import { FSharpList } from '@fable-org/fable-library-ts/List.ts';
+import { CWLWorkflowDescription } from '../CWL/WorkflowDescription.ts';
+import { CWLToolDescription } from '../CWL/ToolDescription.ts';
+import { CWLExpressionToolDescription } from '../CWL/ExpressionToolDescription.ts';
+import { CWLOperationDescription } from '../CWL/OperationDescription.ts';
+import { CWLProcessingUnit_$union } from '../CWL/CWLProcessingUnit.ts';
+/**
+ * Internal mutable state tracking nodes and edges during graph building.
+ */
 export declare class BuildState extends Record {
     readonly Graph: WorkflowGraph;
     NodeIds: FSharpSet<string>;
@@ -25,12 +28,15 @@ export declare class BuildState extends Record {
     constructor(Graph: WorkflowGraph, NodeIds: FSharpSet<string>, EdgeIds: FSharpSet<string>, RunResolutionStack: FSharpSet<string>, RunResolutionCache: FSharpMap<string, WorkflowStepRun_$union>, RunNodeCache: FSharpMap<string, string>, Options: WorkflowGraphBuildOptions);
 }
 export declare function BuildState_$reflection(): TypeInfo;
+/**
+ * Result of resolving a CWL run reference string.
+ */
 export declare class RunResolutionResult extends Record implements IEquatable<RunResolutionResult> {
     readonly ResolvedRun: WorkflowStepRun_$union;
     readonly ResolvedFromPath: Option<string>;
     readonly AttemptedLookup: boolean;
-    readonly ResolutionPathKeys: string[];
-    constructor(ResolvedRun: WorkflowStepRun_$union, ResolvedFromPath: Option<string>, AttemptedLookup: boolean, ResolutionPathKeys: string[]);
+    readonly ResolutionPathKeys: MutableArray<string>;
+    constructor(ResolvedRun: WorkflowStepRun_$union, ResolvedFromPath: Option<string>, AttemptedLookup: boolean, ResolutionPathKeys: MutableArray<string>);
 }
 export declare function RunResolutionResult_$reflection(): TypeInfo;
 /**
@@ -121,7 +127,7 @@ export declare function chooseLabel(fallback: string, candidates: FSharpList<Opt
 /**
  * Generates multiple path candidates to try when resolving a run reference.
  */
-export declare function getRunPathCandidates(workflowFilePath: Option<string>, runPath: string): string[];
+export declare function getRunPathCandidates(workflowFilePath: Option<string>, runPath: string): MutableArray<string>;
 /**
  * Attempts to resolve a CWL run string reference to an actual CWLProcessingUnit via the configured resolver.
  */