@nfdi4plants/arctrl 3.1.1 → 3.2.0

package/dist/ts/ts/Contract/ArcWorkflow.js

@@ -1,17 +1,18 @@
-import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-js/Array.js';
+import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
 import { combineMany, getWorkflowFolderPath } from '../FileSystem/Path.js';
-import { defaultOf } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { defaultArg, value, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { defaultOf } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { defaultArg, value, unwrap } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
 import { Workflow_fileNameFromIdentifier, Workflow_cwlFileNameFromIdentifier } from '../Core/Helper/Identifier.js';
 import { Contract } from './Contract.js';
 import { ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E, ARCtrl_ArcWorkflow__ArcWorkflow_fromFsWorkbook_Static_32154C9D } from '../Spreadsheet/ArcWorkflow.js';
-import { toArray, delay, append, collect, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { toArray, delay, append, collect, singleton, empty } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
 import { FileSystemTree } from '../FileSystem/FileSystemTree.js';
 import { encodeProcessingUnit } from '../CWL/Encode.js';
+import { FsWorkbook } from '../fable_modules/FsSpreadsheet.7.0.1/FsWorkbook.fs.js';
 import { Decode_decodeCWLProcessingUnit } from '../CWL/Decode.js';
 
 function $007CWorkflowPath$007C_$007C(input) {
-  let matchResult;
+  let matchResult = void 0;
   if (!equalsWith((x, y) => x === y, input, defaultOf()) && input.length === 3) {
     if (item(0, input) === "workflows") {
       if (item(2, input) === "isa.workflow.xlsx") {
@@ -27,7 +28,7 @@ function $007CWorkflowPath$007C_$007C(input) {
   }
   switch (matchResult) {
     case 0: {
-      const anyWorkflowName = item(1, input);
+      item(1, input);
       return combineMany(input);
     }
     default:
@@ -35,7 +36,7 @@ function $007CWorkflowPath$007C_$007C(input) {
   }
 }
 function $007CWorkflowCWLPath$007C_$007C(input) {
-  let matchResult;
+  let matchResult = void 0;
   if (!equalsWith((x, y) => x === y, input, defaultOf()) && input.length === 3) {
     if (item(0, input) === "workflows") {
       if (item(2, input) === "workflow.cwl") {
@@ -51,7 +52,7 @@ function $007CWorkflowCWLPath$007C_$007C(input) {
   }
   switch (matchResult) {
     case 0: {
-      const anyWorkflowName = item(1, input);
+      item(1, input);
       return combineMany(input);
     }
     default:
@@ -63,9 +64,9 @@ function ARCtrl_ArcWorkflow__ArcWorkflow_ToCreateContract_6FCE9E49(this$, WithFo
   const path = Workflow_fileNameFromIdentifier(this$.Identifier);
   const c = Contract.createCreate(path, "ISA_Workflow", ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E(this$));
   return toArray(delay(() => {
-    let folderFS;
+    let folderFS = void 0;
     return append(withFolder ? (folderFS = FileSystemTree.createWorkflowsFolder([FileSystemTree.createWorkflowFolder(this$.Identifier)]), collect((p) => p !== path && p !== "workflows/.gitkeep" ? singleton(Contract.createCreate(p, "PlainText")) : empty(), folderFS.ToFilePaths(false))) : empty(), delay(() => {
-      let path_1, dto;
+      let path_1 = void 0, dto = void 0;
       return append(this$.CWLDescription != null ? (path_1 = Workflow_cwlFileNameFromIdentifier(this$.Identifier), dto = encodeProcessingUnit(value(this$.CWLDescription)), singleton(Contract.createCreate(path_1, "CWL", dto))) : empty(), delay(() => singleton(c)));
     }));
   }));
@@ -88,13 +89,17 @@ function ARCtrl_ArcWorkflow__ArcWorkflow_toUpdateContract_Static_Z1C75CB0E(workf
   return ARCtrl_ArcWorkflow__ArcWorkflow_ToUpdateContract(workflow);
 }
 function ARCtrl_ArcWorkflow__ArcWorkflow_tryFromReadContract_Static_7570923F(c) {
-  let matchResult, fsworkbook;
+  let matchResult = void 0, fsworkbook = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "ISA_Workflow") {
         if (c.DTO != null) {
-          matchResult = 0;
-          fsworkbook = value(c.DTO);
+          if (value(c.DTO) instanceof FsWorkbook) {
+            matchResult = 0;
+            fsworkbook = value(c.DTO);
+          } else {
+            matchResult = 1;
+          }
         } else {
           matchResult = 1;
         }
@@ -115,15 +120,14 @@ function ARCtrl_ArcWorkflow__ArcWorkflow_tryFromReadContract_Static_7570923F(c)
   }
 }
 function ARCtrl_ArcWorkflow__ArcWorkflow_tryCWLFromReadContract_Static(workflowIdentifier, c) {
-  let cwl;
   const p = Workflow_cwlFileNameFromIdentifier(workflowIdentifier);
-  let matchResult, cwl_1;
+  let matchResult = void 0, cwl_1 = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "CWL") {
         if (c.DTO != null) {
           if (typeof value(c.DTO) === "string") {
-            if (cwl = value(c.DTO), c.Path === p) {
+            if (value(c.DTO), c.Path === p) {
               matchResult = 0;
               cwl_1 = value(c.DTO);
             } else {

package/dist/ts/ts/Contract/Contract.d.ts

@@ -1,16 +1,17 @@
-import { Record } from '@fable-org/fable-library-js/Types.js';
-import { IComparable, IEquatable } from '@fable-org/fable-library-js/Util.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
+import { IComparable, IEquatable, MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { Record } from '@fable-org/fable-library-ts/Types.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+import { FsWorkbook } from '../fable_modules/FsSpreadsheet.7.0.1/FsWorkbook.fs.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
 export type DTOType = "ISA_Assay" | "ISA_Study" | "ISA_Workflow" | "ISA_Run" | "ISA_Investigation" | "ISA_Datamap" | "JSON" | "Markdown" | "CWL" | "YAML" | "PlainText" | "Cli";
 export declare class CLITool extends Record implements IEquatable<CLITool>, IComparable<CLITool> {
     readonly Name: string;
-    readonly Arguments: string[];
-    constructor(Name: string, Arguments: string[]);
-    static create(name: string, arguments$: string[]): CLITool;
+    readonly Arguments: MutableArray<string>;
+    constructor(Name: string, Arguments: MutableArray<string>);
+    static create(name: string, arguments$: MutableArray<string>): CLITool;
 }
 export declare function CLITool_$reflection(): TypeInfo;
-export type DTO = any | string | CLITool;
+export type DTO = FsWorkbook | string | CLITool;
 export declare function DTO__get_isSpreadsheet(this$: DTO): boolean;
 export declare function DTO__get_isText(this$: DTO): boolean;
 export declare function DTO__get_isCLITool(this$: DTO): boolean;
@@ -28,11 +29,40 @@ export declare class Contract extends Record implements IEquatable<Contract> {
         dtoType?: DTOType;
         dto?: DTO;
     }): Contract;
+    /**
+     * Create a CREATE contract with all necessary information.
+     */
     static createCreate(path: string, dtoType: DTOType, dto?: DTO): Contract;
+    /**
+     * Create a UPDATE contract with all necessary information.
+     *
+     * Update contracts will overwrite in case of a string as DTO and will specifically update relevant changes only for spreadsheet files.
+     */
     static createUpdate(path: string, dtoType: DTOType, dto: DTO): Contract;
+    /**
+     * Create a DELETE contract with all necessary information.
+     */
     static createDelete(path: string): Contract;
+    /**
+     * Create a READ contract with all necessary information.
+     *
+     * Created without DTO, any api user should update the READ contract with the io read result for further api use.
+     * Please check documentation for the exact workflow.
+     */
     static createRead(path: string, dtoType: DTOType): Contract;
+    /**
+     * Create a EXECUTE contract with all necessary information.
+     *
+     * This contract type is used to communicate cli tool execution.
+     */
     static createExecute(dto: CLITool, path?: string): Contract;
+    /**
+     * Create a RENAME contract with all necessary information.
+     *
+     * This contract type is used to communicate file renaming.
+     *
+     * **Note:** The path is the old path, the DTO is the new path.
+     */
     static createRename(oldPath: string, newPath: string): Contract;
 }
 export declare function Contract_$reflection(): TypeInfo;

package/dist/ts/ts/Contract/Contract.d.ts.map

@@ -1 +1 @@
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package/dist/ts/ts/Contract/Contract.js

@@ -1,6 +1,8 @@
-import { Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
-import { record_type, string_type, array_type, option_type, class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
-import { defaultArg } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { Exception } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { Record } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
+import { record_type, string_type, array_type, option_type, class_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
+import { FsWorkbook } from '../fable_modules/FsSpreadsheet.7.0.1/FsWorkbook.fs.js';
+import { defaultArg } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
 
 class CLITool extends Record {
   constructor(Name, Arguments) {
@@ -16,7 +18,11 @@ function CLITool_$reflection() {
   return record_type("ARCtrl.Contract.CLITool", [], CLITool, () => [["Name", string_type], ["Arguments", array_type(string_type)]]);
 }
 function DTO__get_isSpreadsheet(this$) {
-  return true;
+  if (this$ instanceof FsWorkbook) {
+    return true;
+  } else {
+    return false;
+  }
 }
 function DTO__get_isText(this$) {
   if (typeof this$ === "string") {
@@ -33,20 +39,24 @@ function DTO__get_isCLITool(this$) {
   }
 }
 function DTO__AsSpreadsheet(this$) {
-  return this$;
+  if (this$ instanceof FsWorkbook) {
+    return this$;
+  } else {
+    throw new Exception("Not a spreadsheet");
+  }
 }
 function DTO__AsText(this$) {
   if (typeof this$ === "string") {
     return this$;
   } else {
-    throw new Error("Not text");
+    throw new Exception("Not text");
   }
 }
 function DTO__AsCLITool(this$) {
   if (this$ instanceof CLITool) {
     return this$;
   } else {
-    throw new Error("Not a CLI tool");
+    throw new Exception("Not a CLI tool");
   }
 }
 class Contract extends Record {
@@ -60,21 +70,50 @@ class Contract extends Record {
   static create(op, path, { dtoType, dto }) {
     return new Contract(op, path, dtoType, dto);
   }
+  /**
+   * Create a CREATE contract with all necessary information.
+   */
   static createCreate(path, dtoType, dto) {
     return new Contract("CREATE", path, dtoType, dto);
   }
+  /**
+   * Create a UPDATE contract with all necessary information.
+   * 
+   * Update contracts will overwrite in case of a string as DTO and will specifically update relevant changes only for spreadsheet files.
+   */
   static createUpdate(path, dtoType, dto) {
     return new Contract("UPDATE", path, dtoType, dto);
   }
+  /**
+   * Create a DELETE contract with all necessary information.
+   */
   static createDelete(path) {
     return new Contract("DELETE", path, void 0, void 0);
   }
+  /**
+   * Create a READ contract with all necessary information.
+   * 
+   * Created without DTO, any api user should update the READ contract with the io read result for further api use.
+   * Please check documentation for the exact workflow.
+   */
   static createRead(path, dtoType) {
     return new Contract("READ", path, dtoType, void 0);
   }
+  /**
+   * Create a EXECUTE contract with all necessary information.
+   * 
+   * This contract type is used to communicate cli tool execution.
+   */
   static createExecute(dto, path) {
     return new Contract("EXECUTE", defaultArg(path, ""), "Cli", dto);
   }
+  /**
+   * Create a RENAME contract with all necessary information.
+   * 
+   * This contract type is used to communicate file renaming.
+   * 
+   * **Note:** The path is the old path, the DTO is the new path.
+   */
   static createRename(oldPath, newPath) {
     return new Contract("RENAME", oldPath, void 0, newPath);
   }

package/dist/ts/ts/Contract/Datamap.d.ts

@@ -1,7 +1,8 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Contract } from './Contract.js';
-import { Datamap } from '../Core/Datamap.js';
-export declare function $007CDatamapPath$007C_$007C(input: string[]): Option<string>;
+import { MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Contract } from './Contract.ts';
+import { Datamap } from '../Core/Datamap.ts';
+export declare function $007CDatamapPath$007C_$007C(input: MutableArray<string>): Option<string>;
 export declare function ARCtrl_Datamap__Datamap_ToCreateContractForAssay_Z721C83C5(this$: Datamap, assayIdentifier: string): Contract;
 export declare function ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5(this$: Datamap, assayIdentifier: string): Contract;
 export declare function ARCtrl_Datamap__Datamap_ToDeleteContractForAssay_Z721C83C5(this$: Datamap, assayIdentifier: string): Contract;

package/dist/ts/ts/Contract/Datamap.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"Datamap.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Contract/Datamap.ts"],"names":[],"mappings":"AAIA,OAAO,EAAY,YAAY,EAAa,MAAM,qCAAqC,CAAC;AACxF,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEtE,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAEzC,OAAO,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAG7C,wBAAgB,2BAA2B,CAAC,KAAK,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CA8DvF;AAED,wBAAgB,0DAA0D,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,GAAG,QAAQ,CAG5H;AAED,wBAAgB,0DAA0D,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,GAAG,QAAQ,CAG5H;AAED,wBAAgB,0DAA0D,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,GAAG,QAAQ,CAG5H;AAED,wBAAgB,iEAAiE,CAAC,eAAe,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAExI;AAED,wBAAgB,iEAAiE,CAAC,eAAe,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAExI;AAED,wBAAgB,0DAA0D,CAAC,eAAe,EAAE,MAAM,EAAE,CAAC,EAAE,QAAQ,GAAG,MAAM,CAAC,OAAO,CAAC,CA6ChI;AAED,wBAAgB,0DAA0D,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,GAAG,QAAQ,CAG5H;AAED,wBAAgB,0DAA0D,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,GAAG,QAAQ,CAG5H;AAED,wBAAgB,0DAA0D,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,GAAG,QAAQ,CAG5H;AAED,wBAAgB,iEAAiE,CAAC,eAAe,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAExI;AAED,wBAAgB,iEAAiE,CAAC,eAAe,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAExI;AAED,wBAAgB,0DAA0D,CAAC,eAAe,EAAE,MAAM,EAAE,CAAC,EAAE,QAAQ,GAAG,MAAM,CAAC,OAAO,CAAC,CA6ChI;AAED,wBAAgB,6DAA6D,CAAC,KAAK,EAAE,OAAO,EAAE,kBAAkB,EAAE,MAAM,GAAG,QAAQ,CAGlI;AAED,wBAAgB,6DAA6D,CAAC,KAAK,EAAE,OAAO,EAAE,kBAAkB,EAAE,MAAM,GAAG,QAAQ,CAGlI;AAED,wBAAgB,6DAA6D,CAAC,KAAK,EAAE,OAAO,EAAE,kBAAkB,EAAE,MAAM,GAAG,QAAQ,CAGlI;AAED,wBAAgB,oEAAoE,CAAC,kBAAkB,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAE9I;AAED,wBAAgB,oEAAoE,CAAC,kBAAkB,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAE9I;AAED,wBAAgB,6DAA6D,CAAC,kBAAkB,EAAE,MAAM,EAAE,CAAC,EAAE,QAAQ,GAAG,MAAM,CAAC,OAAO,CAAC,CA6CtI;AAED,wBAAgB,wDAAwD,CAAC,KAAK,EAAE,OAAO,EAAE,aAAa,EAAE,MAAM,GAAG,QAAQ,CAGxH;AAED,wBAAgB,wDAAwD,CAAC,KAAK,EAAE,OAAO,EAAE,aAAa,EAAE,MAAM,GAAG,QAAQ,CAGxH;AAED,wBAAgB,wDAAwD,CAAC,KAAK,EAAE,OAAO,EAAE,aAAa,EAAE,MAAM,GAAG,QAAQ,CAGxH;AAED,wBAAgB,+DAA+D,CAAC,aAAa,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAEpI;AAED,wBAAgB,+DAA+D,CAAC,aAAa,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,QAAQ,CAAC,CAEpI;AAED,wBAAgB,wDAAwD,CAAC,aAAa,EAAE,MAAM,EAAE,CAAC,EAAE,QAAQ,GAAG,MAAM,CAAC,OAAO,CAAC,CA6C5H"}

package/dist/ts/ts/Contract/Datamap.js

@@ -1,13 +1,14 @@
-import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-js/Array.js';
+import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
 import { combineMany } from '../FileSystem/Path.js';
-import { defaultOf, safeHash } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { defaultOf, safeHash } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
 import { Assay_datamapFileNameFromIdentifier, Study_datamapFileNameFromIdentifier, Workflow_datamapFileNameFromIdentifier, Run_datamapFileNameFromIdentifier } from '../Core/Helper/Identifier.js';
 import { Contract } from './Contract.js';
 import { toFsWorkbook, fromFsWorkbook } from '../Spreadsheet/Datamap.js';
+import { FsWorkbook } from '../fable_modules/FsSpreadsheet.7.0.1/FsWorkbook.fs.js';
 
 function $007CDatamapPath$007C_$007C(input) {
-  let matchResult;
+  let matchResult = void 0;
   if (!equalsWith((x, y) => x === y, input, defaultOf()) && input.length === 3) {
     if (item(0, input) === "assays") {
       if (item(2, input) === "isa.datamap.xlsx") {
@@ -41,19 +42,19 @@ function $007CDatamapPath$007C_$007C(input) {
   }
   switch (matchResult) {
     case 0: {
-      const anyAssayName = item(1, input);
+      item(1, input);
       return combineMany(input);
     }
     case 1: {
-      const anyStudyName = item(1, input);
+      item(1, input);
       return combineMany(input);
     }
     case 2: {
-      const anyWorkflowName = item(1, input);
+      item(1, input);
       return combineMany(input);
     }
     case 3: {
-      const anyRunName = item(1, input);
+      item(1, input);
       return combineMany(input);
     }
     default:
@@ -79,17 +80,20 @@ function ARCtrl_Datamap__Datamap_toUpdateContractForAssay_Static_Z721C83C5(assay
   return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5(datamap, assayIdentifier);
 }
 function ARCtrl_Datamap__Datamap_tryFromReadContractForAssay_Static(assayIdentifier, c) {
-  let fsworkbook;
   const path = Assay_datamapFileNameFromIdentifier(assayIdentifier);
-  let matchResult, fsworkbook_1, p_1;
+  let matchResult = void 0, fsworkbook_1 = void 0, p_1 = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "ISA_Datamap") {
         if (c.DTO != null) {
-          if (fsworkbook = value(c.DTO), c.Path === path) {
-            matchResult = 0;
-            fsworkbook_1 = value(c.DTO);
-            p_1 = c.Path;
+          if (value(c.DTO) instanceof FsWorkbook) {
+            if (value(c.DTO), c.Path === path) {
+              matchResult = 0;
+              fsworkbook_1 = value(c.DTO);
+              p_1 = c.Path;
+            } else {
+              matchResult = 1;
+            }
           } else {
             matchResult = 1;
           }
@@ -134,17 +138,20 @@ function ARCtrl_Datamap__Datamap_toUpdateContractForStudy_Static_Z721C83C5(study
   return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5(datamap, studyIdentifier);
 }
 function ARCtrl_Datamap__Datamap_tryFromReadContractForStudy_Static(studyIdentifier, c) {
-  let fsworkbook;
   const path = Study_datamapFileNameFromIdentifier(studyIdentifier);
-  let matchResult, fsworkbook_1, p_1;
+  let matchResult = void 0, fsworkbook_1 = void 0, p_1 = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "ISA_Datamap") {
         if (c.DTO != null) {
-          if (fsworkbook = value(c.DTO), c.Path === path) {
-            matchResult = 0;
-            fsworkbook_1 = value(c.DTO);
-            p_1 = c.Path;
+          if (value(c.DTO) instanceof FsWorkbook) {
+            if (value(c.DTO), c.Path === path) {
+              matchResult = 0;
+              fsworkbook_1 = value(c.DTO);
+              p_1 = c.Path;
+            } else {
+              matchResult = 1;
+            }
           } else {
             matchResult = 1;
           }
@@ -189,17 +196,20 @@ function ARCtrl_Datamap__Datamap_toUpdateContractForWorkflow_Static_Z721C83C5(wo
   return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5(datamap, workflowIdentifier);
 }
 function ARCtrl_Datamap__Datamap_tryFromReadContractForWorkflow_Static(workflowIdentifier, c) {
-  let fsworkbook;
   const path = Workflow_datamapFileNameFromIdentifier(workflowIdentifier);
-  let matchResult, fsworkbook_1, p_1;
+  let matchResult = void 0, fsworkbook_1 = void 0, p_1 = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "ISA_Datamap") {
         if (c.DTO != null) {
-          if (fsworkbook = value(c.DTO), c.Path === path) {
-            matchResult = 0;
-            fsworkbook_1 = value(c.DTO);
-            p_1 = c.Path;
+          if (value(c.DTO) instanceof FsWorkbook) {
+            if (value(c.DTO), c.Path === path) {
+              matchResult = 0;
+              fsworkbook_1 = value(c.DTO);
+              p_1 = c.Path;
+            } else {
+              matchResult = 1;
+            }
           } else {
             matchResult = 1;
           }
@@ -244,17 +254,20 @@ function ARCtrl_Datamap__Datamap_toUpdateContractForRun_Static_Z721C83C5(runIden
   return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5(datamap, runIdentifier);
 }
 function ARCtrl_Datamap__Datamap_tryFromReadContractForRun_Static(runIdentifier, c) {
-  let fsworkbook;
   const path = Run_datamapFileNameFromIdentifier(runIdentifier);
-  let matchResult, fsworkbook_1, p_1;
+  let matchResult = void 0, fsworkbook_1 = void 0, p_1 = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "ISA_Datamap") {
         if (c.DTO != null) {
-          if (fsworkbook = value(c.DTO), c.Path === path) {
-            matchResult = 0;
-            fsworkbook_1 = value(c.DTO);
-            p_1 = c.Path;
+          if (value(c.DTO) instanceof FsWorkbook) {
+            if (value(c.DTO), c.Path === path) {
+              matchResult = 0;
+              fsworkbook_1 = value(c.DTO);
+              p_1 = c.Path;
+            } else {
+              matchResult = 1;
+            }
           } else {
             matchResult = 1;
           }

package/dist/ts/ts/Contract/Git.d.ts

@@ -1,8 +1,9 @@
-import { Contract, CLITool } from './Contract.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-export declare function gitWithArgs(arguments$: string[]): CLITool;
-export declare function createGitContractAt(path: string, arguments$: string[]): Contract;
-export declare function createGitContract(arguments$: string[]): Contract;
+import { Contract, CLITool } from './Contract.ts';
+import { MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+export declare function gitWithArgs(arguments$: MutableArray<string>): CLITool;
+export declare function createGitContractAt(path: string, arguments$: MutableArray<string>): Contract;
+export declare function createGitContract(arguments$: MutableArray<string>): Contract;
 export declare const gitignoreContract: Contract;
 export declare const gitattributesContract: Contract;
 export declare class Init {

package/dist/ts/ts/Contract/Git.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"Git.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Contract/Git.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,QAAQ,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAClD,OAAO,EAAE,YAAY,EAAE,MAAM,qCAAqC,CAAC;AACnE,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAKjF,wBAAgB,WAAW,CAAC,UAAU,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,OAAO,CAErE;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,EAAE,UAAU,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,QAAQ,CAE5F;AAED,wBAAgB,iBAAiB,CAAC,UAAU,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,QAAQ,CAE5E;AAED,eAAO,MAAM,iBAAiB,EAAE,QAA0hD,CAAC;AAE3jD,eAAO,MAAM,qBAAqB,EAAE,QAAoH,CAAC;AAEzJ,qBAAa,IAAI;;CAGhB;AAED,wBAAgB,gBAAgB,IAAI,QAAQ,CAE3C;AAED,qBAAa,KAAK;;CAGjB;AAED,wBAAgB,iBAAiB,IAAI,QAAQ,CAE5C;AAED,wBAAgB,aAAa,IAAI,MAAM,CAEtC;AAED,wBAAgB,mBAAmB,IAAI,MAAM,CAE5C;AAED,wBAAgB,eAAe,IAAI,MAAM,CAExC;AAED,wBAAgB,YAAY,IAAI,MAAM,CAErC;AAED,wBAAgB,eAAe,IAAI,MAAM,CAExC;AAED,wBAAgB,gCAAgC,CAAC,MAAM,CAAC,EAAE,MAAM,GAAG,QAAQ,CAG1E;AAED,wBAAgB,sCAAsC,CAAC,SAAS,EAAE,MAAM,GAAG,QAAQ,CAElF;AAED,wBAAgB,eAAe,IAAI,MAAM,CAExC;AAED,wBAAgB,oBAAoB,IAAI,MAAM,CAE7C;AAED,wBAAgB,qBAAqB,IAAI,MAAM,CAE9C;AAED,wBAAgB,sBAAsB,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,GAAG,MAAM,CAE1F;AAED,wBAAgB,kCAAkC,CAAC,SAAS,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,CAAC,MAAM,EAAE,MAAM,CAAC,EAAE,KAAK,CAAC,EAAE,OAAO,GAAG,QAAQ,CAK3J"}

package/dist/ts/ts/Contract/Git.js

@@ -1,8 +1,8 @@
 import { CLITool, Contract } from './Contract.js';
-import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
-import { defaultArg, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { toArray, delay, append, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { class_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
+import { defaultArg, value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { replace } from '../../node_modules/@fable-org/fable-library-ts/String.js';
+import { toArray, delay, append, singleton, empty } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
 
 function gitWithArgs(arguments$) {
   return CLITool.create("git", arguments$);

package/dist/ts/ts/Contract/License.d.ts

@@ -1,5 +1,6 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Contract } from './Contract.js';
-export declare function LicenseContractExtensions_$007CLicensePath$007C_$007C(input: string[]): Option<string>;
+import { MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Contract } from './Contract.ts';
+export declare function LicenseContractExtensions_$007CLicensePath$007C_$007C(input: MutableArray<string>): Option<string>;
 export declare const License_defaultLicenseContract: Contract;
 //# sourceMappingURL=License.d.ts.map

package/dist/ts/ts/Contract/License.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"License.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Contract/License.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAC/D,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAEzC,wBAAgB,qDAAqD,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,MAAM,CAAC,MAAM,CAAC,CA2BrG;AAED,eAAO,MAAM,8BAA8B,EAAE,QAA8F,CAAC"}
+{"version":3,"file":"License.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Contract/License.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,YAAY,EAAyB,MAAM,qCAAqC,CAAC;AAG1F,OAAO,EAAE,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAC/D,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAEzC,wBAAgB,qDAAqD,CAAC,KAAK,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CA2BjH;AAED,eAAO,MAAM,8BAA8B,EAAE,QAA8F,CAAC"}

package/dist/ts/ts/Contract/License.js

@@ -1,17 +1,17 @@
-import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-js/Array.js';
-import { defaultOf, stringHash } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { contains } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
+import { defaultOf, stringHash } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { contains } from '../../node_modules/@fable-org/fable-library-ts/List.js';
 import { alternativeLICENSEFileNames } from '../FileSystem/Path.js';
 import { Contract } from './Contract.js';
 
 function LicenseContractExtensions_$007CLicensePath$007C_$007C(input) {
-  let matchResult;
+  let matchResult = void 0;
   if (!equalsWith((x, y) => x === y, input, defaultOf()) && input.length === 1) {
     if (item(0, input) === "LICENSE") {
       matchResult = 0;
     } else if (contains(item(0, input), alternativeLICENSEFileNames, {
       Equals: (x_1, y_1) => x_1 === y_1,
-      GetHashCode: stringHash
+      GetHashCode: (x_1) => stringHash(x_1) | 0
     })) {
       matchResult = 1;
     } else {

package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts

@@ -1,9 +1,10 @@
-import { Contract } from './Contract.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { ValidationPackagesConfig } from '../ValidationPackages/ValidationPackagesConfig.js';
+import { Contract } from './Contract.ts';
+import { MutableArray } from '@fable-org/fable-library-ts/Util.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { ValidationPackagesConfig } from '../ValidationPackages/ValidationPackagesConfig.ts';
 export declare const ValidationPackagesConfigHelper_ConfigFilePath: string;
 export declare const ValidationPackagesConfigHelper_ReadContract: Contract;
-export declare function ValidationPackagesConfigExtensions_$007CValidationPackagesYamlPath$007C_$007C(input: string[]): Option<string>;
+export declare function ValidationPackagesConfigExtensions_$007CValidationPackagesYamlPath$007C_$007C(input: MutableArray<string>): Option<string>;
 export declare function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToCreateContract(this$: ValidationPackagesConfig): Contract;
 export declare function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToDeleteContract(this$: ValidationPackagesConfig): Contract;
 export declare function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toDeleteContract_Static_724DAE55(config: ValidationPackagesConfig): Contract;

package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ValidationPackagesConfig.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Contract/ValidationPackagesConfig.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAIzC,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEtE,OAAO,EAAE,wBAAwB,EAAE,MAAM,mDAAmD,CAAC;AAE7F,eAAO,MAAM,6CAA6C,EAAE,MAAyD,CAAC;AAEtH,eAAO,MAAM,2CAA2C,EAAE,QAAiG,CAAC;AAE5J,wBAAgB,6EAA6E,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,MAAM,CAAC,MAAM,CAAC,CAwB7H;AAED,wBAAgB,6FAA6F,CAAC,KAAK,EAAE,wBAAwB,GAAG,QAAQ,CAEvJ;AAED,wBAAgB,6FAA6F,CAAC,KAAK,EAAE,wBAAwB,GAAG,QAAQ,CAEvJ;AAED,wBAAgB,6GAA6G,CAAC,MAAM,EAAE,wBAAwB,GAAG,QAAQ,CAExK;AAED,wBAAgB,6GAA6G,CAAC,MAAM,EAAE,wBAAwB,GAAG,QAAQ,CAExK;AAED,wBAAgB,gHAAgH,CAAC,CAAC,EAAE,QAAQ,GAAG,MAAM,CAAC,wBAAwB,CAAC,CA0C9K"}
+{"version":3,"file":"ValidationPackagesConfig.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Contract/ValidationPackagesConfig.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAGzC,OAAO,EAAE,YAAY,EAAa,MAAM,qCAAqC,CAAC;AAC9E,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEtE,OAAO,EAAE,wBAAwB,EAAE,MAAM,mDAAmD,CAAC;AAE7F,eAAO,MAAM,6CAA6C,EAAE,MAAyD,CAAC;AAEtH,eAAO,MAAM,2CAA2C,EAAE,QAAiG,CAAC;AAE5J,wBAAgB,6EAA6E,CAAC,KAAK,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAwBzI;AAED,wBAAgB,6FAA6F,CAAC,KAAK,EAAE,wBAAwB,GAAG,QAAQ,CAEvJ;AAED,wBAAgB,6FAA6F,CAAC,KAAK,EAAE,wBAAwB,GAAG,QAAQ,CAEvJ;AAED,wBAAgB,6GAA6G,CAAC,MAAM,EAAE,wBAAwB,GAAG,QAAQ,CAExK;AAED,wBAAgB,6GAA6G,CAAC,MAAM,EAAE,wBAAwB,GAAG,QAAQ,CAExK;AAED,wBAAgB,gHAAgH,CAAC,CAAC,EAAE,QAAQ,GAAG,MAAM,CAAC,wBAAwB,CAAC,CAyC9K"}

package/dist/ts/ts/Contract/ValidationPackagesConfig.js

@@ -1,14 +1,14 @@
 import { combineMany } from '../FileSystem/Path.js';
 import { Contract } from './Contract.js';
-import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-js/Array.js';
-import { defaultOf } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { equalsWith, item } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
+import { defaultOf } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
+import { value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
 import { ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toYamlString_Static_71136F3F, ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_fromYamlString_Static_Z721C83C5 } from '../Yaml/ValidationPackagesConfig.js';
 
 const ValidationPackagesConfigHelper_ConfigFilePath = combineMany([".arc", "validation_packages.yml"]);
 const ValidationPackagesConfigHelper_ReadContract = new Contract("READ", ValidationPackagesConfigHelper_ConfigFilePath, "YAML", void 0);
 function ValidationPackagesConfigExtensions_$007CValidationPackagesYamlPath$007C_$007C(input) {
-  let matchResult;
+  let matchResult = void 0;
   if (!equalsWith((x, y) => x === y, input, defaultOf()) && input.length === 2) {
     if (item(0, input) === ".arc") {
       if (item(1, input) === "validation_packages.yml") {
@@ -42,14 +42,13 @@ function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesC
   return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToCreateContract(config);
 }
 function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_tryFromReadContract_Static_7570923F(c) {
-  let yaml;
-  let matchResult, p_1, yaml_1;
+  let matchResult = void 0, p_1 = void 0, yaml_1 = void 0;
   if (c.Operation === "READ") {
     if (c.DTOType != null) {
       if (value(c.DTOType) === "YAML") {
         if (c.DTO != null) {
           if (typeof value(c.DTO) === "string") {
-            if (yaml = value(c.DTO), c.Path === ValidationPackagesConfigHelper_ConfigFilePath) {
+            if (value(c.DTO), c.Path === ValidationPackagesConfigHelper_ConfigFilePath) {
               matchResult = 0;
               p_1 = c.Path;
               yaml_1 = value(c.DTO);

package/dist/ts/ts/ContractIO/ContractIO.d.ts

@@ -1,11 +1,12 @@
-import { FSharpResult$2_$union } from '@fable-org/fable-library-js/Result.js';
-import { Contract } from '../Contract/Contract.js';
+import { FSharpResult$2_$union } from '@fable-org/fable-library-ts/Result.ts';
+import { Contract } from '../Contract/Contract.ts';
+import { MutableArray } from '@fable-org/fable-library-ts/Util.ts';
 export declare function fulfillReadContractAsync(basePath: string, c: Contract): Promise<FSharpResult$2_$union<Contract, string>>;
-export declare function fullfillContractBatchAsyncBy(contractF: ((arg0: string, arg1: Contract) => Promise<FSharpResult$2_$union<Contract, string>>), basePath: string, cs: Contract[]): Promise<FSharpResult$2_$union<Contract[], string[]>>;
+export declare function fullfillContractBatchAsyncBy(contractF: ((arg0: string, arg1: Contract) => Promise<FSharpResult$2_$union<Contract, string>>), basePath: string, cs: MutableArray<Contract>): Promise<FSharpResult$2_$union<MutableArray<Contract>, MutableArray<string>>>;
 export declare function fulfillWriteContractAsync(forceOverwrite: boolean, basePath: string, c: Contract): Promise<FSharpResult$2_$union<Contract, string>>;
 export declare function fulfillUpdateContractAsync(basePath: string, c: Contract): Promise<FSharpResult$2_$union<Contract, string>>;
 export declare function fullfillRenameContractAsync(basePath: string, c: Contract): Promise<FSharpResult$2_$union<Contract, string>>;
 export declare function fullfillDeleteContractAsync(basePath: string, c: Contract): Promise<FSharpResult$2_$union<Contract, string>>;
 export declare function fullFillContract(forceOverwrite: boolean, basePath: string, c: Contract): Promise<FSharpResult$2_$union<Contract, string>>;
-export declare function fullFillContractBatchAsync(forceOverwrite: boolean, basePath: string, cs: Contract[]): Promise<FSharpResult$2_$union<Contract[], string[]>>;
+export declare function fullFillContractBatchAsync(forceOverwrite: boolean, basePath: string, cs: MutableArray<Contract>): Promise<FSharpResult$2_$union<MutableArray<Contract>, MutableArray<string>>>;
 //# sourceMappingURL=ContractIO.d.ts.map