@nfdi4plants/arctrl 3.1.1 → 3.2.0

package/dist/ts/ts/FileSystem/Path.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Path.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/Path.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAG1E,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAItE,eAAO,MAAM,UAAU,EAAE,MAAM,EAAgB,CAAC;AAEhD,eAAO,MAAM,2BAA2B,EAAE,UAAU,CAAC,MAAM,CAAyD,CAAC;AAErH,wBAAgB,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,EAAE,CAU5C;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAYzD;AAED,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAO/C;AAED,wBAAgB,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAO9D;AAED,wBAAgB,eAAe,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,CAAC,CAiBxE;AAED,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CAU1D;AAED,wBAAgB,8BAA8B,CAAC,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,MAAM,EAAE,GAAG,MAAM,CAwDpG;AAED,wBAAgB,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CAE5D;AAED,wBAAgB,WAAW,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,MAAM,CAYnD;AAED;;GAEG;AACH,wBAAgB,iBAAiB,CAAC,QAAQ,EAAE,MAAM,EAAE,GAAG,MAAM,EAAE,CAoB9D;AAED;;;;GAIG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAgB9C;AAED,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAcrD;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,MAAM,CAuB1E;AAED,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAEhD;AAED;;GAEG;AACH,wBAAgB,MAAM,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,OAAO,CAE9D;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,qBAAqB,CAAC,kBAAkB,EAAE,MAAM,GAAG,MAAM,CAExE;AAED,wBAAgB,gBAAgB,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAE9D"}
+{"version":3,"file":"Path.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/Path.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,YAAY,EAAE,MAAM,qCAAqC,CAAC;AACnE,OAAO,EAAE,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAG1E,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAItE,eAAO,MAAM,UAAU,EAAE,YAAY,CAAC,MAAM,CAAe,CAAC;AAE5D,eAAO,MAAM,2BAA2B,EAAE,UAAU,CAAC,MAAM,CAAyD,CAAC;AAErH,wBAAgB,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,YAAY,CAAC,MAAM,CAAC,CAUxD;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAYzD;AAED,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAO/C;AAED,wBAAgB,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAO9D;AAED,wBAAgB,eAAe,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,YAAY,CAAC,MAAM,CAAC,CAAC,CAiBpF;AAED,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CAU1D;AAED,wBAAgB,8BAA8B,CAAC,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,MAAM,CAwDhH;AAED,wBAAgB,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CAE5D;AAED,wBAAgB,WAAW,CAAC,KAAK,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,MAAM,CAY/D;AAED;;GAEG;AACH,wBAAgB,iBAAiB,CAAC,QAAQ,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,YAAY,CAAC,MAAM,CAAC,CAoBtF;AAED;;;;GAIG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAgB9C;AAED,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAcrD;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,MAAM,CAuB1E;AAED,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAEhD;AAED;;GAEG;AACH,wBAAgB,MAAM,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,OAAO,CAE9D;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,qBAAqB,CAAC,kBAAkB,EAAE,MAAM,GAAG,MAAM,CAExE;AAED,wBAAgB,gBAAgB,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAE9D"}

package/dist/ts/ts/FileSystem/Path.js

@@ -1,8 +1,8 @@
-import { ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { split as split$1, substring, join, trimEnd, trimStart, trim } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { isLetter } from '../../node_modules/@fable-org/fable-library-js/Char.js';
-import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { mapIndexed, item, append, last } from '../../node_modules/@fable-org/fable-library-js/Array.js';
+import { ofArray } from '../../node_modules/@fable-org/fable-library-ts/List.js';
+import { split as split$1, substring, concat, join, trimEnd, trimStart, trim } from '../../node_modules/@fable-org/fable-library-ts/String.js';
+import { isLetter } from '../../node_modules/@fable-org/fable-library-ts/Char.js';
+import { value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { mapIndexed, item, append, last } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
 
 const seperators = ["/", "\\"];
 const alternativeLICENSEFileNames = ofArray(["LICENSE.txt", "LICENSE.md", "LICENSE.rst"]);
@@ -60,13 +60,13 @@ function normalizeRootPrefix(prefix) {
   if (prefix === "//") {
     return "//";
   } else if (prefix.endsWith(":")) {
-    return `${prefix}/`;
+    return concat(prefix, "/");
   } else {
     return "/";
   }
 }
 function buildPathFromPrefixAndSegments(prefixOpt, segments) {
-  let prefix_1, prefix_2;
+  let prefix_1 = void 0, prefix_2 = void 0;
   if (segments.length === 0) {
     if (prefixOpt == null) {
       return "";
@@ -75,7 +75,7 @@ function buildPathFromPrefixAndSegments(prefixOpt, segments) {
     }
   } else {
     const combined = join("/", segments);
-    let matchResult, prefix_3, prefix_4;
+    let matchResult = void 0, prefix_3 = void 0, prefix_4 = void 0;
     if (prefixOpt == null) {
       matchResult = 4;
     } else {
@@ -105,13 +105,13 @@ function buildPathFromPrefixAndSegments(prefixOpt, segments) {
     }
     switch (matchResult) {
       case 0:
-        return `//${combined}`;
+        return concat("//", combined);
       case 1:
-        return `${prefix_3}/${combined}`;
+        return concat(prefix_3, "/", combined);
       case 2:
-        return `/${combined}`;
+        return concat("/", combined);
       case 3:
-        return `${prefix_4}/${combined}`;
+        return concat(prefix_4, "/", combined);
       default:
         return combined;
     }
@@ -138,7 +138,7 @@ function normalizeSegments(segments) {
     const segment = rawSegment.trim();
     if (segment === "" ? true : segment === ".") {
     } else if (segment === "..") {
-      if (resolved.length > 0 && resolved[resolved.length - 1] !== "..") {
+      if (resolved.length > 0 && item(resolved.length - 1, resolved) !== "..") {
         resolved.splice(resolved.length - 1, 1);
       } else {
         void resolved.push(segment);

package/dist/ts/ts/Json/Assay.d.ts

@@ -1,15 +1,15 @@
-import { FSharpList } from '@fable-org/fable-library-js/List.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { OntologyAnnotation } from '../Core/OntologyAnnotation.js';
-import { ArcAssay } from '../Core/ArcTypes.js';
-import { IMap } from '@fable-org/fable-library-js/Util.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { CompositeCell_$union } from '../Core/Table/CompositeCell.js';
+import { FSharpList } from '@fable-org/fable-library-ts/List.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.9.1/Types.fs.js';
+import { OntologyAnnotation } from '../Core/OntologyAnnotation.ts';
+import { ArcAssay } from '../Core/ArcTypes.ts';
+import { MutableArray, IMap } from '@fable-org/fable-library-ts/Util.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { CompositeCell_$union } from '../Core/Table/CompositeCell.ts';
 export declare function encoder(assay: ArcAssay): IEncodable;
 export declare const decoder: Decoder$1<ArcAssay>;
 export declare function encoderCompressed(stringTable: IMap<string, int32>, oaTable: IMap<OntologyAnnotation, int32>, cellTable: IMap<CompositeCell_$union, int32>, assay: ArcAssay): IEncodable;
-export declare function decoderCompressed(stringTable: string[], oaTable: OntologyAnnotation[], cellTable: CompositeCell_$union[]): Decoder$1<ArcAssay>;
+export declare function decoderCompressed(stringTable: MutableArray<string>, oaTable: MutableArray<OntologyAnnotation>, cellTable: MutableArray<CompositeCell_$union>): Decoder$1<ArcAssay>;
 export declare function ROCrate_genID(a: ArcAssay): string;
 export declare function ROCrate_encoder(assayName: Option<string>, a: ArcAssay): IEncodable;
 export declare const ROCrate_decoder: Decoder$1<ArcAssay>;

package/dist/ts/ts/Json/Assay.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Assay.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Assay.ts"],"names":[],"mappings":"AAAA,OAAO,EAAoB,UAAU,EAAmB,MAAM,qCAAqC,CAAC;AACpG,OAAO,EAA8C,MAAM,EAAO,MAAM,uCAAuC,CAAC;AAChH,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAG9G,OAAO,EAAE,kBAAkB,EAAE,MAAM,+BAA+B,CAAC;AAUnE,OAAO,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAE/C,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,oBAAoB,EAAE,MAAM,gCAAgC,CAAC;AAmBtE,wBAAgB,OAAO,CAAC,KAAK,EAAE,QAAQ,GAAG,UAAU,CAqBnD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,QAAQ,CAGtC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,KAAK,EAAE,QAAQ,GAAG,UAAU,CAqBvL;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,QAAQ,CAAC,CAK9I;AAED,wBAAgB,aAAa,CAAC,CAAC,EAAE,QAAQ,GAAG,MAAM,CAQjD;AAED,wBAAgB,eAAe,CAAC,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,EAAE,QAAQ,GAAG,UAAU,CAwClF;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAQ9C,CAAC;AAEH,wBAAgB,eAAe,CAAC,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,QAAQ,GAAG,UAAU,CAqC3H;AAED,eAAO,MAAM,qBAAqB,EAAE,UAAU,CAAC,MAAM,CAAuN,CAAC;AAE7Q,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CA+C9C,CAAC"}
+{"version":3,"file":"Assay.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Assay.ts"],"names":[],"mappings":"AACA,OAAO,EAAoB,UAAU,EAAmB,MAAM,qCAAqC,CAAC;AACpG,OAAO,EAAwC,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACrG,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAG9G,OAAO,EAAE,kBAAkB,EAAE,MAAM,+BAA+B,CAAC;AAUnE,OAAO,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAE/C,OAAO,EAAE,YAAY,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AACzE,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,oBAAoB,EAAE,MAAM,gCAAgC,CAAC;AAmBtE,wBAAgB,OAAO,CAAC,KAAK,EAAE,QAAQ,GAAG,UAAU,CA6BnD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,QAAQ,CAGtC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,KAAK,EAAE,QAAQ,GAAG,UAAU,CA6BvL;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,YAAY,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,YAAY,CAAC,kBAAkB,CAAC,EAAE,SAAS,EAAE,YAAY,CAAC,oBAAoB,CAAC,GAAG,SAAS,CAAC,QAAQ,CAAC,CAKlL;AAED,wBAAgB,aAAa,CAAC,CAAC,EAAE,QAAQ,GAAG,MAAM,CAQjD;AAED,wBAAgB,eAAe,CAAC,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,EAAE,QAAQ,GAAG,UAAU,CAgDlF;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAU9C,CAAC;AAEH,wBAAgB,eAAe,CAAC,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,QAAQ,GAAG,UAAU,CA6C3H;AAED,eAAO,MAAM,qBAAqB,EAAE,UAAU,CAAC,MAAM,CAAuN,CAAC;AAE7Q,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAqD9C,CAAC"}

package/dist/ts/ts/Json/Assay.js

@@ -1,5 +1,5 @@
-import { choose, ofArray, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { map, unwrap, defaultArg, value, bind } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { choose, ofArray, singleton, empty } from '../../node_modules/@fable-org/fable-library-ts/List.js';
+import { value, unwrap, defaultArg } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
 import { tryInclude, tryIncludeSeq, tryIncludeList } from './Encode.js';
 import { OntologyAnnotation_encoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_encoderPropertyValue, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ROCrate_decoderPropertyValue, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from './OntologyAnnotation.js';
 import { encoder as encoder$1, decoder as decoder$2, encoderCompressed as encoderCompressed$2, decoderCompressed as decoderCompressed$2 } from './Datamap/Datamap.js';
@@ -7,14 +7,14 @@ import { encoder as encoder$2, decoder as decoder$1, encoderCompressed as encode
 import { encoder as encoder$3, decoder as decoder$3, ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$2 } from './Person.js';
 import { encoder as encoder$4, decoder as decoder$4, ROCrate_encoder as ROCrate_encoder$4, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$2 } from './Comment.js';
 import { Comment$ } from '../Core/Comment.js';
-import { map as map$1, toList, delay, append, empty as empty$1, singleton as singleton$1, tryPick, length } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map, toList, delay, append, empty as empty$1, singleton as singleton$1, tryPick, length } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
 import { ArcAssay } from '../Core/ArcTypes.js';
-import { object, string, resizeArray, list as list$1, map as map$2 } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
-import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { object, string, resizeArray, list as list$1, map as map$1 } from '../fable_modules/Thoth.Json.Core.0.9.1/Decode.fs.js';
+import { concat, replace } from '../../node_modules/@fable-org/fable-library-ts/String.js';
 import { Assay_fileNameFromIdentifier, createMissingIdentifier, Assay_tryIdentifierFromFileName } from '../Core/Helper/Identifier.js';
 import { ARCtrl_ArcTables__ArcTables_GetProcesses, ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D, JsonTypes_composeTechnologyPlatform, JsonTypes_decomposeTechnologyPlatform } from '../Core/Conversion.js';
 import { getData, getUnits, getCharacteristics } from '../Core/Process/ProcessSequence.js';
-import { list } from '../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
+import { list } from '../fable_modules/Thoth.Json.Core.0.9.1/Encode.fs.js';
 import { ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$1 } from './Data.js';
 import { ROCrate_encoder as ROCrate_encoder$3, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$1 } from './Process/Process.js';
 import { context_jsonvalue } from './context/rocrate/isa_assay_context.js';
@@ -25,10 +25,17 @@ import { encode } from './IDTable.js';
 import { Decode_objectNoAdditionalProperties } from './Decode.js';
 
 function encoder(assay) {
-  let value;
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["Identifier", (value = assay.Identifier, {
+  let value$1 = void 0;
+  const values_1 = choose((tupledArg) => {
+    const option_1 = tupledArg[1];
+    if (option_1 != null) {
+      return [tupledArg[0], value(option_1)];
+    } else {
+      return void 0;
+    }
+  }, ofArray([["Identifier", (value$1 = assay.Identifier, {
     Encode(helpers) {
-      return helpers.encodeString(value);
+      return helpers.encodeString(value$1);
     }
   })], tryInclude("Title", (value_1) => ({
     Encode(helpers_1) {
@@ -41,20 +48,27 @@ function encoder(assay) {
   }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryInclude("Datamap", encoder$1, assay.Datamap), tryIncludeSeq("Tables", encoder$2, assay.Tables), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
   return {
     Encode(helpers_3) {
-      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+      const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
       return helpers_3.encodeObject(arg);
     }
   };
 }
 const decoder = object((get$) => {
-  let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9;
+  let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0, objectArg_4 = void 0, objectArg_5 = void 0, arg_13 = void 0, objectArg_6 = void 0, objectArg_7 = void 0, arg_17 = void 0, objectArg_8 = void 0, arg_19 = void 0, objectArg_9 = void 0;
   return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((objectArg_7 = get$.Optional, objectArg_7.Field("Datamap", decoder$2))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
 });
 function encoderCompressed(stringTable, oaTable, cellTable, assay) {
-  let value;
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["Identifier", (value = assay.Identifier, {
+  let value$1 = void 0;
+  const values_1 = choose((tupledArg) => {
+    const option_1 = tupledArg[1];
+    if (option_1 != null) {
+      return [tupledArg[0], value(option_1)];
+    } else {
+      return void 0;
+    }
+  }, ofArray([["Identifier", (value$1 = assay.Identifier, {
     Encode(helpers) {
-      return helpers.encodeString(value);
+      return helpers.encodeString(value$1);
     }
   })], tryInclude("Title", (value_1) => ({
     Encode(helpers_1) {
@@ -67,14 +81,14 @@ function encoderCompressed(stringTable, oaTable, cellTable, assay) {
   }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryIncludeSeq("Tables", (table) => encoderCompressed$1(stringTable, oaTable, cellTable, table), assay.Tables), tryInclude("Datamap", (dm) => encoderCompressed$2(stringTable, oaTable, cellTable, dm), assay.Datamap), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
   return {
     Encode(helpers_3) {
-      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+      const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
       return helpers_3.encodeObject(arg);
     }
   };
 }
 function decoderCompressed(stringTable, oaTable, cellTable) {
   return object((get$) => {
-    let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9;
+    let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0, objectArg_4 = void 0, objectArg_5 = void 0, arg_13 = void 0, objectArg_6 = void 0, arg_15 = void 0, objectArg_7 = void 0, arg_17 = void 0, objectArg_8 = void 0, arg_19 = void 0, objectArg_9 = void 0;
     return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((arg_15 = decoderCompressed$2(stringTable, oaTable, cellTable), objectArg_7 = get$.Optional, objectArg_7.Field("Datamap", arg_15))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
   });
 }
@@ -83,17 +97,24 @@ function ROCrate_genID(a) {
   if (matchValue === "") {
     return "#EmptyAssay";
   } else {
-    return `assays/${replace(matchValue, " ", "_")}/`;
+    return concat("assays/", replace(matchValue, " ", "_"), "/");
   }
 }
 function ROCrate_encoder(assayName, a) {
-  let value, value_3, assayName_1;
+  let value$1 = void 0, value_3 = void 0, assayName_1 = void 0;
   const fileName = Assay_fileNameFromIdentifier(a.Identifier);
   const processes = ARCtrl_ArcTables__ArcTables_GetProcesses(a);
   const dataFiles = getData(processes);
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["@id", (value = ROCrate_genID(a), {
+  const values_1 = choose((tupledArg) => {
+    const option_1 = tupledArg[1];
+    if (option_1 != null) {
+      return [tupledArg[0], value(option_1)];
+    } else {
+      return void 0;
+    }
+  }, ofArray([["@id", (value$1 = ROCrate_genID(a), {
     Encode(helpers) {
-      return helpers.encodeString(value);
+      return helpers.encodeString(value$1);
     }
   })], ["@type", list(singleton({
     Encode(helpers_1) {
@@ -122,32 +143,41 @@ function ROCrate_encoder(assayName, a) {
   }), a.Description), tryInclude("measurementType", OntologyAnnotation_ROCrate_encoderPropertyValue, a.MeasurementType), tryInclude("technologyType", OntologyAnnotation_ROCrate_encoderDefinedTerm, a.TechnologyType), tryInclude("technologyPlatform", OntologyAnnotation_ROCrate_encoderDefinedTerm, a.TechnologyPlatform), tryIncludeSeq("performers", ROCrate_encoder$1, a.Performers), tryIncludeList("dataFiles", ROCrate_encoder$2, dataFiles), tryIncludeList("processSequence", (assayName_1 = a.Identifier, (oa_5) => ROCrate_encoder$3(assayName, assayName_1, oa_5)), processes), tryIncludeSeq("comments", ROCrate_encoder$4, a.Comments), ["@context", context_jsonvalue]]));
   return {
     Encode(helpers_7) {
-      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_7)], values_1);
+      const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_7)], values_1);
       return helpers_7.encodeObject(arg);
     }
   };
 }
 const ROCrate_decoder = object((get$) => {
-  let objectArg, arg_3, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, objectArg_6, arg_16, objectArg_7, arg_18, objectArg_8;
+  let objectArg = void 0, a = void 0, objectArg_2 = void 0, objectArg_3 = void 0, objectArg_4 = void 0, objectArg_5 = void 0, objectArg_6 = void 0, arg_16 = void 0, objectArg_7 = void 0, arg_18 = void 0, objectArg_8 = void 0;
   const identifier = defaultArg((objectArg = get$.Optional, objectArg.Field("identifier", string)), createMissingIdentifier());
-  const tables = map((arg_4) => {
-    const a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(arg_4);
-    return a.Tables;
-  }, (arg_3 = list$1(ROCrate_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("processSequence", arg_3)));
+  let tables;
+  let option_2;
+  const arg_3 = list$1(ROCrate_decoder$1);
+  const objectArg_1 = get$.Optional;
+  option_2 = objectArg_1.Field("processSequence", arg_3);
+  tables = option_2 != null ? (a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(value(option_2)), a.Tables) : void 0;
   return new ArcAssay(identifier, unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("title", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("description", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("measurementType", OntologyAnnotation_ROCrate_decoderPropertyValue))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("technologyType", OntologyAnnotation_ROCrate_decoderDefinedTerm))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("technologyPlatform", OntologyAnnotation_ROCrate_decoderDefinedTerm))), unwrap(tables), void 0, unwrap((arg_16 = resizeArray(ROCrate_decoder$2), objectArg_7 = get$.Optional, objectArg_7.Field("performers", arg_16))), unwrap((arg_18 = resizeArray(ROCrate_decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_18))));
 });
 function ISAJson_encoder(studyName, idMap, a) {
   const f = (a_1) => {
-    let assayName;
+    let option_1 = void 0, assayName = void 0;
     const fileName = Assay_fileNameFromIdentifier(a_1.Identifier);
     const processes = ARCtrl_ArcTables__ArcTables_GetProcesses(a_1);
     const encodedUnits = tryIncludeList("unitCategories", (oa) => OntologyAnnotation_ISAJson_encoder(idMap, oa), getUnits(processes));
     const encodedCharacteristics = tryIncludeList("characteristicCategories", (value_1) => encoder$5(idMap, value_1), getCharacteristics(processes));
     const encodedMaterials = tryInclude("materials", (ps) => encoder$6(idMap, ps), Option_fromValueWithDefault(empty(), processes));
     const encocedDataFiles = tryIncludeList("dataFiles", (oa_1) => ISAJson_encoder$1(idMap, oa_1), getData(processes));
-    const units = getUnits(processes);
+    getUnits(processes);
     const comments = toList(delay(() => append(a_1.Comments.length > 0 ? a_1.Comments : empty$1(), delay(() => append(a_1.Title != null ? singleton$1(Comment$.create("title", value(a_1.Title))) : empty$1(), delay(() => a_1.Description != null ? singleton$1(Comment$.create("description", value(a_1.Description))) : empty$1()))))));
-    const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["filename", {
+    const values_1 = choose((tupledArg) => {
+      const option_3 = tupledArg[1];
+      if (option_3 != null) {
+        return [tupledArg[0], value(option_3)];
+      } else {
+        return void 0;
+      }
+    }, ofArray([["filename", {
       Encode(helpers) {
         return helpers.encodeString(fileName);
       }
@@ -159,10 +189,10 @@ function ISAJson_encoder(studyName, idMap, a) {
       Encode(helpers_2) {
         return helpers_2.encodeString(value_7);
       }
-    }), map(JsonTypes_composeTechnologyPlatform, a_1.TechnologyPlatform)), encocedDataFiles, encodedMaterials, encodedCharacteristics, encodedUnits, tryIncludeList("processSequence", (assayName = a_1.Identifier, (oa_4) => ISAJson_encoder$2(studyName, assayName, idMap, oa_4)), processes), tryIncludeSeq("comments", (comment) => ISAJson_encoder$3(idMap, comment), comments)]));
+    }), (option_1 = a_1.TechnologyPlatform, option_1 != null ? JsonTypes_composeTechnologyPlatform(value(option_1)) : void 0)), encocedDataFiles, encodedMaterials, encodedCharacteristics, encodedUnits, tryIncludeList("processSequence", (assayName = a_1.Identifier, (oa_4) => ISAJson_encoder$2(studyName, assayName, idMap, oa_4)), processes), tryIncludeSeq("comments", (comment) => ISAJson_encoder$3(idMap, comment), comments)]));
     return {
       Encode(helpers_3) {
-        const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+        const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
         return helpers_3.encodeObject(arg);
       }
     };
@@ -175,31 +205,39 @@ function ISAJson_encoder(studyName, idMap, a) {
 }
 const ISAJson_allowedFields = ofArray(["@id", "filename", "measurementType", "technologyType", "technologyPlatform", "dataFiles", "materials", "characteristicCategories", "unitCategories", "processSequence", "comments", "@type", "@context"]);
 const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedFields, (get$) => {
-  let objectArg, arg_3, objectArg_1, objectArg_3, objectArg_4, arg_12, objectArg_5;
-  const identifier = defaultArg(bind(Assay_tryIdentifierFromFileName, (objectArg = get$.Optional, objectArg.Field("filename", string))), createMissingIdentifier());
-  const tables = map((arg_4) => {
-    const a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(arg_4);
-    return a.Tables;
-  }, (arg_3 = list$1(ISAJson_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("processSequence", arg_3)));
+  let option_1 = void 0, objectArg = void 0, a = void 0, objectArg_3 = void 0, objectArg_4 = void 0, arg_12 = void 0, objectArg_5 = void 0;
+  const identifier = defaultArg((option_1 = (objectArg = get$.Optional, objectArg.Field("filename", string)), option_1 != null ? Assay_tryIdentifierFromFileName(value(option_1)) : void 0), createMissingIdentifier());
+  let tables;
+  let option_4;
+  const arg_3 = list$1(ISAJson_decoder$1);
+  const objectArg_1 = get$.Optional;
+  option_4 = objectArg_1.Field("processSequence", arg_3);
+  tables = option_4 != null ? (a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(value(option_4)), a.Tables) : void 0;
   let comments;
   const arg_6 = resizeArray(ISAJson_decoder$2);
   const objectArg_2 = get$.Optional;
   comments = objectArg_2.Field("comments", arg_6);
-  const title = bind((c) => tryPick((x) => {
+  let title;
+  const option_6 = comments;
+  title = option_6 != null ? tryPick((x) => {
     if (x.Name != null && value(x.Name) === "title") {
       return x.Value;
     } else {
       return void 0;
     }
-  }, c), comments);
-  const description = bind((c_1) => tryPick((x_1) => {
+  }, value(option_6)) : void 0;
+  let description;
+  const option_8 = comments;
+  description = option_8 != null ? tryPick((x_1) => {
     if (x_1.Name != null && value(x_1.Name) === "description") {
       return x_1.Value;
     } else {
       return void 0;
     }
-  }, c_1), comments);
-  const comments_1 = bind((c_2) => {
+  }, value(option_8)) : void 0;
+  let comments_1;
+  const option_10 = comments;
+  if (option_10 != null) {
     const matchValue = ResizeArray_filter((x_2) => {
       if (x_2.Name == null) {
         return true;
@@ -208,14 +246,12 @@ const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedField
       } else {
         return false;
       }
-    }, c_2);
-    if (length(matchValue) === 0) {
-      return void 0;
-    } else {
-      return matchValue;
-    }
-  }, comments);
-  return new ArcAssay(identifier, unwrap(title), unwrap(description), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("measurementType", OntologyAnnotation_ISAJson_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("technologyType", OntologyAnnotation_ISAJson_decoder))), unwrap((arg_12 = map$2(JsonTypes_decomposeTechnologyPlatform, string), objectArg_5 = get$.Optional, objectArg_5.Field("technologyPlatform", arg_12))), unwrap(tables), void 0, void 0, unwrap(comments_1));
+    }, value(option_10));
+    comments_1 = length(matchValue) === 0 ? void 0 : matchValue;
+  } else {
+    comments_1 = void 0;
+  }
+  return new ArcAssay(identifier, unwrap(title), unwrap(description), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("measurementType", OntologyAnnotation_ISAJson_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("technologyType", OntologyAnnotation_ISAJson_decoder))), unwrap((arg_12 = map$1(JsonTypes_decomposeTechnologyPlatform, string), objectArg_5 = get$.Optional, objectArg_5.Field("technologyPlatform", arg_12))), unwrap(tables), void 0, void 0, unwrap(comments_1));
 });
 
 export { ISAJson_allowedFields, ISAJson_decoder, ISAJson_encoder, ROCrate_decoder, ROCrate_encoder, ROCrate_genID, decoder, decoderCompressed, encoder, encoderCompressed };

package/dist/ts/ts/Json/Comment.d.ts

@@ -1,7 +1,7 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { Comment$ } from '../Core/Comment.js';
-import { IMap } from '@fable-org/fable-library-js/Util.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.9.1/Types.fs.js';
+import { Comment$ } from '../Core/Comment.ts';
+import { IMap } from '@fable-org/fable-library-ts/Util.ts';
 export declare function encoder(comment: Comment$): IEncodable;
 export declare const decoder: Decoder$1<Comment$>;
 export declare function ROCrate_genID(c: Comment$): string;

package/dist/ts/ts/Json/Comment.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Comment.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Comment.ts"],"names":[],"mappings":"AACA,OAAO,EAA4B,MAAM,EAAO,MAAM,uCAAuC,CAAC;AAC9F,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAG9G,OAAO,EAAE,QAAQ,EAAE,MAAM,oBAAoB,CAAC;AAM9C,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAE3D,wBAAgB,OAAO,CAAC,OAAO,EAAE,QAAQ,GAAG,UAAU,CAgBrD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,QAAQ,CAGtC,CAAC;AAEH,wBAAgB,aAAa,CAAC,CAAC,EAAE,QAAQ,GAAG,MAAM,CAUjD;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,QAAQ,GAAG,UAAU,CAyB7D;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAG9C,CAAC;AAEH,wBAAgB,wCAAwC,CAAC,OAAO,EAAE,QAAQ,GAAG,UAAU,CAOtF;AAED,eAAO,MAAM,wCAAwC,EAAE,SAAS,CAAC,QAAQ,CAAoF,CAAC;AAE9J,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,OAAO,EAAE,QAAQ,GAAG,UAAU,CA4BtG;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAAW,CAAC"}
+{"version":3,"file":"Comment.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Comment.ts"],"names":[],"mappings":"AAEA,OAAO,EAA4B,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACzF,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAG9G,OAAO,EAAE,QAAQ,EAAE,MAAM,oBAAoB,CAAC;AAM9C,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAE3D,wBAAgB,OAAO,CAAC,OAAO,EAAE,QAAQ,GAAG,UAAU,CAwBrD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,QAAQ,CAGtC,CAAC;AAEH,wBAAgB,aAAa,CAAC,CAAC,EAAE,QAAQ,GAAG,MAAM,CAUjD;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,QAAQ,GAAG,UAAU,CAiC7D;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAG9C,CAAC;AAEH,wBAAgB,wCAAwC,CAAC,OAAO,EAAE,QAAQ,GAAG,UAAU,CAOtF;AAED,eAAO,MAAM,wCAAwC,EAAE,SAAS,CAAC,QAAQ,CAAoF,CAAC;AAE9J,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,OAAO,EAAE,QAAQ,GAAG,UAAU,CAoCtG;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,QAAQ,CAAW,CAAC"}

package/dist/ts/ts/Json/Comment.js

@@ -1,16 +1,23 @@
-import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { map, unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-ts/List.js';
+import { value, unwrap } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
 import { tryInclude } from './Encode.js';
-import { map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
 import { Comment$ } from '../Core/Comment.js';
-import { object, string, map as map$2 } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
-import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { object, string, map as map$1 } from '../fable_modules/Thoth.Json.Core.0.9.1/Decode.fs.js';
+import { replace } from '../../node_modules/@fable-org/fable-library-ts/String.js';
 import { context_jsonvalue } from './context/rocrate/isa_comment_context.js';
-import { toString } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { toString } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
 import { encode } from './IDTable.js';
 
 function encoder(comment) {
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("name", (value) => ({
+  const values_1 = choose((tupledArg) => {
+    const option_1 = tupledArg[1];
+    if (option_1 != null) {
+      return [tupledArg[0], value(option_1)];
+    } else {
+      return void 0;
+    }
+  }, ofArray([tryInclude("name", (value) => ({
     Encode(helpers) {
       return helpers.encodeString(value);
     }
@@ -21,13 +28,13 @@ function encoder(comment) {
   }), comment.Value)]));
   return {
     Encode(helpers_2) {
-      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_2)], values_1);
+      const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_2)], values_1);
       return helpers_2.encodeObject(arg);
     }
   };
 }
 const decoder = object((get$) => {
-  let objectArg, objectArg_1;
+  let objectArg = void 0, objectArg_1 = void 0;
   return new Comment$(unwrap((objectArg = get$.Optional, objectArg.Field("name", string))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("value", string))));
 });
 function ROCrate_genID(c) {
@@ -41,10 +48,17 @@ function ROCrate_genID(c) {
   }
 }
 function ROCrate_encoder(comment) {
-  let value;
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["@id", (value = ROCrate_genID(comment), {
+  let value$1 = void 0;
+  const values_1 = choose((tupledArg) => {
+    const option_1 = tupledArg[1];
+    if (option_1 != null) {
+      return [tupledArg[0], value(option_1)];
+    } else {
+      return void 0;
+    }
+  }, ofArray([["@id", (value$1 = ROCrate_genID(comment), {
     Encode(helpers) {
-      return helpers.encodeString(value);
+      return helpers.encodeString(value$1);
     }
   })], ["@type", {
     Encode(helpers_1) {
@@ -61,13 +75,13 @@ function ROCrate_encoder(comment) {
   }), comment.Value), ["@context", context_jsonvalue]]));
   return {
     Encode(helpers_4) {
-      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_4)], values_1);
+      const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_4)], values_1);
       return helpers_4.encodeObject(arg);
     }
   };
 }
 const ROCrate_decoder = object((get$) => {
-  let objectArg, objectArg_1;
+  let objectArg = void 0, objectArg_1 = void 0;
   return new Comment$(unwrap((objectArg = get$.Optional, objectArg.Field("name", string))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("value", string))));
 });
 function ROCrate_encoderDisambiguatingDescription(comment) {
@@ -78,10 +92,17 @@ function ROCrate_encoderDisambiguatingDescription(comment) {
     }
   };
 }
-const ROCrate_decoderDisambiguatingDescription = map$2((s) => Comment$.fromString(s), string);
+const ROCrate_decoderDisambiguatingDescription = map$1((s) => Comment$.fromString(s), string);
 function ISAJson_encoder(idMap, comment) {
   const f = (comment_1) => {
-    const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("@id", (value) => ({
+    const values_1 = choose((tupledArg) => {
+      const option_1 = tupledArg[1];
+      if (option_1 != null) {
+        return [tupledArg[0], value(option_1)];
+      } else {
+        return void 0;
+      }
+    }, ofArray([tryInclude("@id", (value) => ({
       Encode(helpers) {
         return helpers.encodeString(value);
       }
@@ -96,7 +117,7 @@ function ISAJson_encoder(idMap, comment) {
     }), comment_1.Value)]));
     return {
       Encode(helpers_3) {
-        const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+        const arg = map((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
         return helpers_3.encodeObject(arg);
       }
     };

package/dist/ts/ts/Json/Data.d.ts

@@ -1,13 +1,13 @@
-import { FSharpList } from '@fable-org/fable-library-js/List.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { Data } from '../Core/Data.js';
-import { IMap } from '@fable-org/fable-library-js/Util.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
+import { FSharpList } from '@fable-org/fable-library-ts/List.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Decoder$1, IEncodable } from '../fable_modules/Thoth.Json.Core.0.9.1/Types.fs.js';
+import { Data } from '../Core/Data.ts';
+import { MutableArray, IMap } from '@fable-org/fable-library-ts/Util.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
 export declare function encoder(d: Data): IEncodable;
 export declare const decoder: Decoder$1<Data>;
 export declare function compressedEncoder(stringTable: IMap<string, int32>, d: Data): IEncodable;
-export declare function compressedDecoder(stringTable: string[]): Decoder$1<Data>;
+export declare function compressedDecoder(stringTable: MutableArray<string>): Decoder$1<Data>;
 export declare function ROCrate_genID(d: Data): string;
 export declare function ROCrate_encoder(oa: Data): IEncodable;
 export declare const ROCrate_decoder: Decoder$1<Data>;

package/dist/ts/ts/Json/Data.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Data.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Data.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAA8B,MAAM,qCAAqC,CAAC;AAC7F,OAAO,EAA4B,MAAM,EAAO,MAAM,uCAAuC,CAAC;AAC9F,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAO9G,OAAO,EAAE,IAAI,EAAE,MAAM,iBAAiB,CAAC;AAIvC,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAO7D,wBAAgB,OAAO,CAAC,CAAC,EAAE,IAAI,GAAG,UAAU,CAwB3C;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,IAAI,CAGlC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,CAAC,EAAE,IAAI,GAAG,UAAU,CAQvF;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,GAAG,SAAS,CAAC,IAAI,CAAC,CAKxE;AAED,wBAAgB,aAAa,CAAC,CAAC,EAAE,IAAI,GAAG,MAAM,CAc7C;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,IAAI,GAAG,UAAU,CA6BpD;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,IAAI,CAG1C,CAAC;AAEH,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,EAAE,EAAE,IAAI,GAAG,UAAU,CAwB7F;AAED,eAAO,MAAM,qBAAqB,EAAE,UAAU,CAAC,MAAM,CAAqE,CAAC;AAE3H,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,IAAI,CAG1C,CAAC"}
+{"version":3,"file":"Data.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Json/Data.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,UAAU,EAA8B,MAAM,qCAAqC,CAAC;AAC7F,OAAO,EAA4B,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACzF,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAO9G,OAAO,EAAE,IAAI,EAAE,MAAM,iBAAiB,CAAC;AAIvC,OAAO,EAAE,YAAY,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AACzE,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAO7D,wBAAgB,OAAO,CAAC,CAAC,EAAE,IAAI,GAAG,UAAU,CAgC3C;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,IAAI,CAGlC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,CAAC,EAAE,IAAI,GAAG,UAAU,CAgBvF;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,YAAY,CAAC,MAAM,CAAC,GAAG,SAAS,CAAC,IAAI,CAAC,CAKpF;AAED,wBAAgB,aAAa,CAAC,CAAC,EAAE,IAAI,GAAG,MAAM,CAc7C;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,IAAI,GAAG,UAAU,CAqCpD;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,IAAI,CAG1C,CAAC;AAEH,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,EAAE,EAAE,IAAI,GAAG,UAAU,CAgC7F;AAED,eAAO,MAAM,qBAAqB,EAAE,UAAU,CAAC,MAAM,CAAqE,CAAC;AAE3H,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,IAAI,CAG1C,CAAC"}