@nfdi4plants/arctrl 3.1.1 → 3.2.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (889) hide show
  1. package/dist/ts/index.d.ts +3 -0
  2. package/dist/ts/index.d.ts.map +1 -1
  3. package/dist/ts/index.js +3 -0
  4. package/dist/ts/node_modules/@fable-org/fable-library-ts/Array.js +1296 -0
  5. package/dist/ts/node_modules/@fable-org/fable-library-ts/Async.js +174 -0
  6. package/dist/ts/node_modules/@fable-org/fable-library-ts/AsyncBuilder.js +190 -0
  7. package/dist/ts/node_modules/@fable-org/fable-library-ts/BigInt.js +479 -0
  8. package/dist/ts/node_modules/@fable-org/fable-library-ts/Boolean.js +23 -0
  9. package/dist/ts/node_modules/@fable-org/fable-library-ts/Char.js +172 -0
  10. package/dist/ts/node_modules/@fable-org/fable-library-ts/Choice.js +187 -0
  11. package/dist/ts/node_modules/@fable-org/fable-library-ts/CollectionUtil.js +148 -0
  12. package/dist/ts/node_modules/@fable-org/fable-library-ts/Date.js +843 -0
  13. package/dist/ts/node_modules/@fable-org/fable-library-ts/DateOffset.js +247 -0
  14. package/dist/ts/node_modules/@fable-org/fable-library-ts/Decimal.js +279 -0
  15. package/dist/ts/node_modules/@fable-org/fable-library-ts/Double.js +53 -0
  16. package/dist/ts/node_modules/@fable-org/fable-library-ts/FSharp.Collections.js +48 -0
  17. package/dist/ts/node_modules/@fable-org/fable-library-ts/FSharp.Core.js +148 -0
  18. package/dist/ts/node_modules/@fable-org/fable-library-ts/Global.js +31 -0
  19. package/dist/ts/node_modules/@fable-org/fable-library-ts/Guid.js +140 -0
  20. package/dist/ts/node_modules/@fable-org/fable-library-ts/Int32.js +165 -0
  21. package/dist/ts/node_modules/@fable-org/fable-library-ts/List.js +1282 -0
  22. package/dist/ts/node_modules/@fable-org/fable-library-ts/Long.js +40 -0
  23. package/dist/ts/node_modules/@fable-org/fable-library-ts/Map.js +1298 -0
  24. package/dist/ts/node_modules/@fable-org/fable-library-ts/MapUtil.js +126 -0
  25. package/dist/ts/node_modules/@fable-org/fable-library-ts/MutableMap.js +323 -0
  26. package/dist/ts/node_modules/@fable-org/fable-library-ts/MutableSet.js +225 -0
  27. package/dist/ts/node_modules/@fable-org/fable-library-ts/Native.js +14 -0
  28. package/dist/ts/node_modules/@fable-org/fable-library-ts/Numeric.js +63 -0
  29. package/dist/ts/node_modules/@fable-org/fable-library-ts/Option.js +81 -0
  30. package/dist/ts/node_modules/@fable-org/fable-library-ts/Random.js +174 -0
  31. package/dist/ts/node_modules/@fable-org/fable-library-ts/Range.js +47 -0
  32. package/dist/ts/node_modules/@fable-org/fable-library-ts/Reflection.js +471 -0
  33. package/dist/ts/node_modules/@fable-org/fable-library-ts/RegExp.js +137 -0
  34. package/dist/ts/node_modules/@fable-org/fable-library-ts/Result.js +169 -0
  35. package/dist/ts/node_modules/@fable-org/fable-library-ts/Seq.js +1398 -0
  36. package/dist/ts/node_modules/@fable-org/fable-library-ts/Seq2.js +110 -0
  37. package/dist/ts/node_modules/@fable-org/fable-library-ts/Set.js +1670 -0
  38. package/dist/ts/node_modules/@fable-org/fable-library-ts/String.js +660 -0
  39. package/dist/ts/node_modules/@fable-org/fable-library-ts/System.Collections.Generic.js +328 -0
  40. package/dist/ts/node_modules/@fable-org/fable-library-ts/System.Text.js +201 -0
  41. package/dist/ts/node_modules/@fable-org/fable-library-ts/System.js +292 -0
  42. package/dist/ts/node_modules/@fable-org/fable-library-ts/TimeSpan.js +170 -0
  43. package/dist/ts/node_modules/@fable-org/fable-library-ts/Types.js +199 -0
  44. package/dist/ts/node_modules/@fable-org/{fable-library-js → fable-library-ts}/Unicode.13.0.0.js +0 -2
  45. package/dist/ts/node_modules/@fable-org/fable-library-ts/Uri.js +154 -0
  46. package/dist/ts/node_modules/@fable-org/fable-library-ts/Util.js +747 -0
  47. package/dist/ts/node_modules/@fable-org/fable-library-ts/lib/big.js +1052 -0
  48. package/dist/ts/ts/ARC.d.ts +122 -62
  49. package/dist/ts/ts/ARC.d.ts.map +1 -1
  50. package/dist/ts/ts/ARC.js +142 -86
  51. package/dist/ts/ts/CWL/CWLKnownFieldNames.d.ts +32 -0
  52. package/dist/ts/ts/CWL/CWLKnownFieldNames.d.ts.map +1 -0
  53. package/dist/ts/ts/CWL/CWLKnownFieldNames.js +95 -0
  54. package/dist/ts/ts/CWL/CWLProcessingUnit.d.ts +12 -12
  55. package/dist/ts/ts/CWL/CWLProcessingUnit.d.ts.map +1 -1
  56. package/dist/ts/ts/CWL/CWLProcessingUnit.js +7 -7
  57. package/dist/ts/ts/CWL/CWLTypes.d.ts +62 -19
  58. package/dist/ts/ts/CWL/CWLTypes.d.ts.map +1 -1
  59. package/dist/ts/ts/CWL/CWLTypes.js +241 -60
  60. package/dist/ts/ts/CWL/Decode.d.ts +24 -25
  61. package/dist/ts/ts/CWL/Decode.d.ts.map +1 -1
  62. package/dist/ts/ts/CWL/Decode.js +454 -314
  63. package/dist/ts/ts/CWL/DynamicObjHelpers.d.ts +4 -4
  64. package/dist/ts/ts/CWL/DynamicObjHelpers.d.ts.map +1 -1
  65. package/dist/ts/ts/CWL/DynamicObjHelpers.js +10 -10
  66. package/dist/ts/ts/CWL/Encode.d.ts +26 -17
  67. package/dist/ts/ts/CWL/Encode.d.ts.map +1 -1
  68. package/dist/ts/ts/CWL/Encode.js +451 -411
  69. package/dist/ts/ts/CWL/ExpressionToolDescription.d.ts +31 -7
  70. package/dist/ts/ts/CWL/ExpressionToolDescription.d.ts.map +1 -1
  71. package/dist/ts/ts/CWL/ExpressionToolDescription.js +29 -8
  72. package/dist/ts/ts/CWL/HashHelpers.d.ts +4 -3
  73. package/dist/ts/ts/CWL/HashHelpers.d.ts.map +1 -1
  74. package/dist/ts/ts/CWL/HashHelpers.js +9 -9
  75. package/dist/ts/ts/CWL/Inputs.d.ts +8 -8
  76. package/dist/ts/ts/CWL/Inputs.d.ts.map +1 -1
  77. package/dist/ts/ts/CWL/Inputs.js +9 -13
  78. package/dist/ts/ts/CWL/OperationDescription.d.ts +7 -7
  79. package/dist/ts/ts/CWL/OperationDescription.d.ts.map +1 -1
  80. package/dist/ts/ts/CWL/OperationDescription.js +5 -8
  81. package/dist/ts/ts/CWL/Outputs.d.ts +10 -10
  82. package/dist/ts/ts/CWL/Outputs.d.ts.map +1 -1
  83. package/dist/ts/ts/CWL/Outputs.js +36 -17
  84. package/dist/ts/ts/CWL/ParameterReference.d.ts +13 -10
  85. package/dist/ts/ts/CWL/ParameterReference.d.ts.map +1 -1
  86. package/dist/ts/ts/CWL/ParameterReference.js +29 -21
  87. package/dist/ts/ts/CWL/ParameterValue.d.ts +57 -0
  88. package/dist/ts/ts/CWL/ParameterValue.d.ts.map +1 -0
  89. package/dist/ts/ts/CWL/ParameterValue.js +321 -0
  90. package/dist/ts/ts/CWL/Requirements.d.ts +51 -23
  91. package/dist/ts/ts/CWL/Requirements.d.ts.map +1 -1
  92. package/dist/ts/ts/CWL/Requirements.js +89 -81
  93. package/dist/ts/ts/CWL/ToolDescription.d.ts +33 -9
  94. package/dist/ts/ts/CWL/ToolDescription.d.ts.map +1 -1
  95. package/dist/ts/ts/CWL/ToolDescription.js +29 -8
  96. package/dist/ts/ts/CWL/WorkflowDescription.d.ts +29 -8
  97. package/dist/ts/ts/CWL/WorkflowDescription.d.ts.map +1 -1
  98. package/dist/ts/ts/CWL/WorkflowDescription.js +26 -8
  99. package/dist/ts/ts/CWL/WorkflowSteps.d.ts +45 -21
  100. package/dist/ts/ts/CWL/WorkflowSteps.d.ts.map +1 -1
  101. package/dist/ts/ts/CWL/WorkflowSteps.js +70 -34
  102. package/dist/ts/ts/CWLRunResolver.d.ts +11 -11
  103. package/dist/ts/ts/CWLRunResolver.d.ts.map +1 -1
  104. package/dist/ts/ts/CWLRunResolver.js +16 -16
  105. package/dist/ts/ts/Contract/ARC.d.ts +2 -2
  106. package/dist/ts/ts/Contract/ARC.d.ts.map +1 -1
  107. package/dist/ts/ts/Contract/ARC.js +1 -1
  108. package/dist/ts/ts/Contract/ArcAssay.d.ts +7 -6
  109. package/dist/ts/ts/Contract/ArcAssay.d.ts.map +1 -1
  110. package/dist/ts/ts/Contract/ArcAssay.js +15 -10
  111. package/dist/ts/ts/Contract/ArcInvestigation.d.ts +5 -4
  112. package/dist/ts/ts/Contract/ArcInvestigation.d.ts.map +1 -1
  113. package/dist/ts/ts/Contract/ArcInvestigation.js +12 -7
  114. package/dist/ts/ts/Contract/ArcRun.d.ts +11 -10
  115. package/dist/ts/ts/Contract/ArcRun.d.ts.map +1 -1
  116. package/dist/ts/ts/Contract/ArcRun.js +24 -21
  117. package/dist/ts/ts/Contract/ArcStudy.d.ts +8 -7
  118. package/dist/ts/ts/Contract/ArcStudy.d.ts.map +1 -1
  119. package/dist/ts/ts/Contract/ArcStudy.js +15 -10
  120. package/dist/ts/ts/Contract/ArcWorkflow.d.ts +9 -8
  121. package/dist/ts/ts/Contract/ArcWorkflow.d.ts.map +1 -1
  122. package/dist/ts/ts/Contract/ArcWorkflow.js +20 -16
  123. package/dist/ts/ts/Contract/Contract.d.ts +38 -8
  124. package/dist/ts/ts/Contract/Contract.d.ts.map +1 -1
  125. package/dist/ts/ts/Contract/Contract.js +46 -7
  126. package/dist/ts/ts/Contract/Datamap.d.ts +5 -4
  127. package/dist/ts/ts/Contract/Datamap.d.ts.map +1 -1
  128. package/dist/ts/ts/Contract/Datamap.js +45 -32
  129. package/dist/ts/ts/Contract/Git.d.ts +6 -5
  130. package/dist/ts/ts/Contract/Git.d.ts.map +1 -1
  131. package/dist/ts/ts/Contract/Git.js +4 -4
  132. package/dist/ts/ts/Contract/License.d.ts +4 -3
  133. package/dist/ts/ts/Contract/License.d.ts.map +1 -1
  134. package/dist/ts/ts/Contract/License.js +5 -5
  135. package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts +5 -4
  136. package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts.map +1 -1
  137. package/dist/ts/ts/Contract/ValidationPackagesConfig.js +6 -7
  138. package/dist/ts/ts/ContractIO/ContractIO.d.ts +5 -4
  139. package/dist/ts/ts/ContractIO/ContractIO.d.ts.map +1 -1
  140. package/dist/ts/ts/ContractIO/ContractIO.js +45 -43
  141. package/dist/ts/ts/ContractIO/FileSystemHelper.d.ts +13 -12
  142. package/dist/ts/ts/ContractIO/FileSystemHelper.d.ts.map +1 -1
  143. package/dist/ts/ts/ContractIO/FileSystemHelper.js +6 -6
  144. package/dist/ts/ts/Conversion/Assay.d.ts +5 -5
  145. package/dist/ts/ts/Conversion/Assay.d.ts.map +1 -1
  146. package/dist/ts/ts/Conversion/Assay.js +35 -16
  147. package/dist/ts/ts/Conversion/Basic.d.ts +16 -13
  148. package/dist/ts/ts/Conversion/Basic.d.ts.map +1 -1
  149. package/dist/ts/ts/Conversion/Basic.js +69 -38
  150. package/dist/ts/ts/Conversion/ColumnIndex.d.ts +3 -3
  151. package/dist/ts/ts/Conversion/ColumnIndex.d.ts.map +1 -1
  152. package/dist/ts/ts/Conversion/ColumnIndex.js +8 -8
  153. package/dist/ts/ts/Conversion/Datamap.d.ts +4 -4
  154. package/dist/ts/ts/Conversion/Datamap.d.ts.map +1 -1
  155. package/dist/ts/ts/Conversion/Datamap.js +2 -2
  156. package/dist/ts/ts/Conversion/DateTime.d.ts +1 -1
  157. package/dist/ts/ts/Conversion/DateTime.d.ts.map +1 -1
  158. package/dist/ts/ts/Conversion/DateTime.js +7 -6
  159. package/dist/ts/ts/Conversion/Investigation.d.ts +5 -5
  160. package/dist/ts/ts/Conversion/Investigation.d.ts.map +1 -1
  161. package/dist/ts/ts/Conversion/Investigation.js +17 -10
  162. package/dist/ts/ts/Conversion/Person.d.ts +4 -4
  163. package/dist/ts/ts/Conversion/Person.d.ts.map +1 -1
  164. package/dist/ts/ts/Conversion/Person.js +39 -23
  165. package/dist/ts/ts/Conversion/Process.d.ts +14 -11
  166. package/dist/ts/ts/Conversion/Process.d.ts.map +1 -1
  167. package/dist/ts/ts/Conversion/Process.js +57 -46
  168. package/dist/ts/ts/Conversion/Run.d.ts +12 -17
  169. package/dist/ts/ts/Conversion/Run.d.ts.map +1 -1
  170. package/dist/ts/ts/Conversion/Run.js +450 -68
  171. package/dist/ts/ts/Conversion/ScholarlyArticle.d.ts +4 -4
  172. package/dist/ts/ts/Conversion/ScholarlyArticle.d.ts.map +1 -1
  173. package/dist/ts/ts/Conversion/ScholarlyArticle.js +25 -17
  174. package/dist/ts/ts/Conversion/Study.d.ts +5 -5
  175. package/dist/ts/ts/Conversion/Study.d.ts.map +1 -1
  176. package/dist/ts/ts/Conversion/Study.js +27 -13
  177. package/dist/ts/ts/Conversion/Table.d.ts +10 -11
  178. package/dist/ts/ts/Conversion/Table.d.ts.map +1 -1
  179. package/dist/ts/ts/Conversion/Table.js +17 -24
  180. package/dist/ts/ts/Conversion/Workflow.d.ts +17 -17
  181. package/dist/ts/ts/Conversion/Workflow.d.ts.map +1 -1
  182. package/dist/ts/ts/Conversion/Workflow.js +78 -40
  183. package/dist/ts/ts/Conversion.d.ts +10 -11
  184. package/dist/ts/ts/Conversion.d.ts.map +1 -1
  185. package/dist/ts/ts/Conversion.js +2 -2
  186. package/dist/ts/ts/Core/ArcTypes.d.ts +331 -76
  187. package/dist/ts/ts/Core/ArcTypes.d.ts.map +1 -1
  188. package/dist/ts/ts/Core/ArcTypes.js +567 -299
  189. package/dist/ts/ts/Core/Comment.d.ts +5 -5
  190. package/dist/ts/ts/Core/Comment.d.ts.map +1 -1
  191. package/dist/ts/ts/Core/Comment.js +17 -10
  192. package/dist/ts/ts/Core/CommentList.d.ts +3 -3
  193. package/dist/ts/ts/Core/CommentList.d.ts.map +1 -1
  194. package/dist/ts/ts/Core/CommentList.js +8 -8
  195. package/dist/ts/ts/Core/Conversion.d.ts +25 -25
  196. package/dist/ts/ts/Core/Conversion.d.ts.map +1 -1
  197. package/dist/ts/ts/Core/Conversion.js +102 -102
  198. package/dist/ts/ts/Core/Data.d.ts +6 -6
  199. package/dist/ts/ts/Core/Data.d.ts.map +1 -1
  200. package/dist/ts/ts/Core/Data.js +11 -10
  201. package/dist/ts/ts/Core/DataContext.d.ts +10 -10
  202. package/dist/ts/ts/Core/DataContext.d.ts.map +1 -1
  203. package/dist/ts/ts/Core/DataContext.js +3 -3
  204. package/dist/ts/ts/Core/DataFile.d.ts +9 -6
  205. package/dist/ts/ts/Core/DataFile.d.ts.map +1 -1
  206. package/dist/ts/ts/Core/DataFile.js +20 -9
  207. package/dist/ts/ts/Core/Datamap.d.ts +17 -16
  208. package/dist/ts/ts/Core/Datamap.d.ts.map +1 -1
  209. package/dist/ts/ts/Core/Datamap.js +16 -14
  210. package/dist/ts/ts/Core/Helper/Collections.d.ts +4 -4
  211. package/dist/ts/ts/Core/Helper/Collections.d.ts.map +1 -1
  212. package/dist/ts/ts/Core/Helper/Collections.js +30 -37
  213. package/dist/ts/ts/Core/Helper/HashCodes.d.ts +15 -4
  214. package/dist/ts/ts/Core/Helper/HashCodes.d.ts.map +1 -1
  215. package/dist/ts/ts/Core/Helper/HashCodes.js +33 -14
  216. package/dist/ts/ts/Core/Helper/Identifier.d.ts +1 -1
  217. package/dist/ts/ts/Core/Helper/Identifier.d.ts.map +1 -1
  218. package/dist/ts/ts/Core/Helper/Identifier.js +10 -8
  219. package/dist/ts/ts/Core/Helper/ORCID.d.ts +1 -1
  220. package/dist/ts/ts/Core/Helper/ORCID.d.ts.map +1 -1
  221. package/dist/ts/ts/Core/Helper/ORCID.js +4 -3
  222. package/dist/ts/ts/Core/Helper/Regex.d.ts +7 -7
  223. package/dist/ts/ts/Core/Helper/Regex.d.ts.map +1 -1
  224. package/dist/ts/ts/Core/Helper/Regex.js +20 -12
  225. package/dist/ts/ts/Core/Helper/SemVer.d.ts +5 -5
  226. package/dist/ts/ts/Core/Helper/SemVer.d.ts.map +1 -1
  227. package/dist/ts/ts/Core/Helper/SemVer.js +7 -7
  228. package/dist/ts/ts/Core/Helper/Url.d.ts +1 -1
  229. package/dist/ts/ts/Core/Helper/Url.d.ts.map +1 -1
  230. package/dist/ts/ts/Core/Helper/Url.js +8 -7
  231. package/dist/ts/ts/Core/IdentifierSetters.d.ts +2 -2
  232. package/dist/ts/ts/Core/IdentifierSetters.d.ts.map +1 -1
  233. package/dist/ts/ts/Core/OntologyAnnotation.d.ts +23 -5
  234. package/dist/ts/ts/Core/OntologyAnnotation.d.ts.map +1 -1
  235. package/dist/ts/ts/Core/OntologyAnnotation.js +116 -45
  236. package/dist/ts/ts/Core/OntologySourceReference.d.ts +4 -4
  237. package/dist/ts/ts/Core/OntologySourceReference.d.ts.map +1 -1
  238. package/dist/ts/ts/Core/OntologySourceReference.js +4 -4
  239. package/dist/ts/ts/Core/Person.d.ts +19 -9
  240. package/dist/ts/ts/Core/Person.d.ts.map +1 -1
  241. package/dist/ts/ts/Core/Person.js +27 -11
  242. package/dist/ts/ts/Core/Process/ColumnIndex.d.ts +11 -11
  243. package/dist/ts/ts/Core/Process/ColumnIndex.d.ts.map +1 -1
  244. package/dist/ts/ts/Core/Process/ColumnIndex.js +68 -29
  245. package/dist/ts/ts/Core/Process/Component.d.ts +16 -16
  246. package/dist/ts/ts/Core/Process/Component.d.ts.map +1 -1
  247. package/dist/ts/ts/Core/Process/Component.js +38 -25
  248. package/dist/ts/ts/Core/Process/Factor.d.ts +53 -8
  249. package/dist/ts/ts/Core/Process/Factor.d.ts.map +1 -1
  250. package/dist/ts/ts/Core/Process/Factor.js +62 -11
  251. package/dist/ts/ts/Core/Process/FactorValue.d.ts +15 -15
  252. package/dist/ts/ts/Core/Process/FactorValue.d.ts.map +1 -1
  253. package/dist/ts/ts/Core/Process/FactorValue.js +39 -47
  254. package/dist/ts/ts/Core/Process/Material.d.ts +9 -9
  255. package/dist/ts/ts/Core/Process/Material.d.ts.map +1 -1
  256. package/dist/ts/ts/Core/Process/Material.js +5 -5
  257. package/dist/ts/ts/Core/Process/MaterialAttribute.d.ts +7 -7
  258. package/dist/ts/ts/Core/Process/MaterialAttribute.d.ts.map +1 -1
  259. package/dist/ts/ts/Core/Process/MaterialAttribute.js +17 -8
  260. package/dist/ts/ts/Core/Process/MaterialAttributeValue.d.ts +15 -15
  261. package/dist/ts/ts/Core/Process/MaterialAttributeValue.d.ts.map +1 -1
  262. package/dist/ts/ts/Core/Process/MaterialAttributeValue.js +45 -48
  263. package/dist/ts/ts/Core/Process/MaterialType.d.ts +7 -5
  264. package/dist/ts/ts/Core/Process/MaterialType.d.ts.map +1 -1
  265. package/dist/ts/ts/Core/Process/MaterialType.js +14 -7
  266. package/dist/ts/ts/Core/Process/Process.d.ts +22 -22
  267. package/dist/ts/ts/Core/Process/Process.d.ts.map +1 -1
  268. package/dist/ts/ts/Core/Process/Process.js +42 -26
  269. package/dist/ts/ts/Core/Process/ProcessInput.d.ts +14 -14
  270. package/dist/ts/ts/Core/Process/ProcessInput.d.ts.map +1 -1
  271. package/dist/ts/ts/Core/Process/ProcessInput.js +15 -10
  272. package/dist/ts/ts/Core/Process/ProcessOutput.d.ts +14 -14
  273. package/dist/ts/ts/Core/Process/ProcessOutput.d.ts.map +1 -1
  274. package/dist/ts/ts/Core/Process/ProcessOutput.js +15 -10
  275. package/dist/ts/ts/Core/Process/ProcessParameterValue.d.ts +30 -15
  276. package/dist/ts/ts/Core/Process/ProcessParameterValue.d.ts.map +1 -1
  277. package/dist/ts/ts/Core/Process/ProcessParameterValue.js +56 -46
  278. package/dist/ts/ts/Core/Process/ProcessSequence.d.ts +16 -16
  279. package/dist/ts/ts/Core/Process/ProcessSequence.d.ts.map +1 -1
  280. package/dist/ts/ts/Core/Process/ProcessSequence.js +33 -26
  281. package/dist/ts/ts/Core/Process/Protocol.d.ts +9 -9
  282. package/dist/ts/ts/Core/Process/Protocol.d.ts.map +1 -1
  283. package/dist/ts/ts/Core/Process/Protocol.js +21 -13
  284. package/dist/ts/ts/Core/Process/ProtocolParameter.d.ts +28 -7
  285. package/dist/ts/ts/Core/Process/ProtocolParameter.d.ts.map +1 -1
  286. package/dist/ts/ts/Core/Process/ProtocolParameter.js +33 -8
  287. package/dist/ts/ts/Core/Process/Sample.d.ts +10 -10
  288. package/dist/ts/ts/Core/Process/Sample.d.ts.map +1 -1
  289. package/dist/ts/ts/Core/Process/Sample.js +5 -5
  290. package/dist/ts/ts/Core/Process/Source.d.ts +8 -8
  291. package/dist/ts/ts/Core/Process/Source.d.ts.map +1 -1
  292. package/dist/ts/ts/Core/Process/Source.js +5 -5
  293. package/dist/ts/ts/Core/Publication.d.ts +5 -5
  294. package/dist/ts/ts/Core/Publication.d.ts.map +1 -1
  295. package/dist/ts/ts/Core/Publication.js +18 -11
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  828. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Decode.fs.js +98 -104
  829. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Encode.fs.js +10 -10
  830. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Escapes.fs.js +41 -34
  831. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Persil.fs.js +48 -48
  832. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Preprocessing.fs.js +14 -14
  833. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Reader.fs.js +129 -112
  834. package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Regex.fs.js +23 -0
  835. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/RegexActivePatterns.fs.js +14 -14
  836. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Syntax.fs.js +77 -56
  837. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Writer.fs.js +34 -31
  838. package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/YAMLiciousTypes.fs.js +74 -32
  839. package/package.json +3 -2
  840. package/dist/ts/node_modules/@fable-org/fable-library-js/Array.js +0 -1244
  841. package/dist/ts/node_modules/@fable-org/fable-library-js/Async.js +0 -146
  842. package/dist/ts/node_modules/@fable-org/fable-library-js/AsyncBuilder.js +0 -186
  843. package/dist/ts/node_modules/@fable-org/fable-library-js/BigInt.js +0 -286
  844. package/dist/ts/node_modules/@fable-org/fable-library-js/Boolean.js +0 -24
  845. package/dist/ts/node_modules/@fable-org/fable-library-js/Char.js +0 -172
  846. package/dist/ts/node_modules/@fable-org/fable-library-js/Choice.js +0 -187
  847. package/dist/ts/node_modules/@fable-org/fable-library-js/CollectionUtil.js +0 -185
  848. package/dist/ts/node_modules/@fable-org/fable-library-js/Date.js +0 -750
  849. package/dist/ts/node_modules/@fable-org/fable-library-js/DateOffset.js +0 -271
  850. package/dist/ts/node_modules/@fable-org/fable-library-js/Decimal.js +0 -214
  851. package/dist/ts/node_modules/@fable-org/fable-library-js/Double.js +0 -49
  852. package/dist/ts/node_modules/@fable-org/fable-library-js/FSharp.Collections.js +0 -30
  853. package/dist/ts/node_modules/@fable-org/fable-library-js/FSharp.Core.js +0 -72
  854. package/dist/ts/node_modules/@fable-org/fable-library-js/Global.js +0 -10
  855. package/dist/ts/node_modules/@fable-org/fable-library-js/Guid.js +0 -145
  856. package/dist/ts/node_modules/@fable-org/fable-library-js/Int32.js +0 -137
  857. package/dist/ts/node_modules/@fable-org/fable-library-js/List.js +0 -1276
  858. package/dist/ts/node_modules/@fable-org/fable-library-js/Long.js +0 -49
  859. package/dist/ts/node_modules/@fable-org/fable-library-js/Map.js +0 -1399
  860. package/dist/ts/node_modules/@fable-org/fable-library-js/MapUtil.js +0 -130
  861. package/dist/ts/node_modules/@fable-org/fable-library-js/MutableMap.js +0 -330
  862. package/dist/ts/node_modules/@fable-org/fable-library-js/MutableSet.js +0 -236
  863. package/dist/ts/node_modules/@fable-org/fable-library-js/Native.js +0 -10
  864. package/dist/ts/node_modules/@fable-org/fable-library-js/Numeric.js +0 -73
  865. package/dist/ts/node_modules/@fable-org/fable-library-js/Option.js +0 -99
  866. package/dist/ts/node_modules/@fable-org/fable-library-js/Range.js +0 -48
  867. package/dist/ts/node_modules/@fable-org/fable-library-js/Reflection.js +0 -465
  868. package/dist/ts/node_modules/@fable-org/fable-library-js/RegExp.js +0 -133
  869. package/dist/ts/node_modules/@fable-org/fable-library-js/Result.js +0 -168
  870. package/dist/ts/node_modules/@fable-org/fable-library-js/Seq.js +0 -1381
  871. package/dist/ts/node_modules/@fable-org/fable-library-js/Seq2.js +0 -114
  872. package/dist/ts/node_modules/@fable-org/fable-library-js/Set.js +0 -1792
  873. package/dist/ts/node_modules/@fable-org/fable-library-js/String.js +0 -557
  874. package/dist/ts/node_modules/@fable-org/fable-library-js/System.Collections.Generic.js +0 -320
  875. package/dist/ts/node_modules/@fable-org/fable-library-js/System.Text.js +0 -165
  876. package/dist/ts/node_modules/@fable-org/fable-library-js/SystemException.js +0 -8
  877. package/dist/ts/node_modules/@fable-org/fable-library-js/TimeSpan.js +0 -180
  878. package/dist/ts/node_modules/@fable-org/fable-library-js/Types.js +0 -211
  879. package/dist/ts/node_modules/@fable-org/fable-library-js/Uri.js +0 -160
  880. package/dist/ts/node_modules/@fable-org/fable-library-js/Util.js +0 -771
  881. package/dist/ts/node_modules/@fable-org/fable-library-js/lib/big.js +0 -825
  882. package/dist/ts/ts/Core/Value.d.ts +0 -41
  883. package/dist/ts/ts/Core/Value.d.ts.map +0 -1
  884. package/dist/ts/ts/fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js +0 -367
  885. package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Cell.fs.js +0 -68
  886. package/dist/ts/ts/fable_modules/YAMLicious.1.0.0-alpha.11/Regex.fs.js +0 -21
  887. package/dist/ts/ts/fable_modules/YAMLicious.1.0.0-alpha.11/StringBuffer.fs.js +0 -60
  888. /package/dist/ts/ts/fable_modules/{Fable.Exceljs.1.6.0 → Fable.Exceljs.2.0.0_565fc3e-alpha.1}/ExcelJs.fs.js +0 -0
  889. /package/dist/ts/ts/fable_modules/{YAMLicious.1.0.0-alpha.11 → YAMLicious.1.0.0}/Interop/JsInterop.fs.js +0 -0
@@ -1,30 +1,34 @@
1
- import { getEnumerator, disposeSafe, defaultOf, comparePrimitives } from '../../node_modules/@fable-org/fable-library-js/Util.js';
2
- import { Record, FSharpRef } from '../../node_modules/@fable-org/fable-library-js/Types.js';
3
- import { value, map, unwrap, defaultArg, bind, orElseWith } from '../../node_modules/@fable-org/fable-library-js/Option.js';
4
- import { record_type, string_type, option_type, array_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
5
- import { toText, printf, interpolate, substring, replace, trim } from '../../node_modules/@fable-org/fable-library-js/String.js';
6
- import { YAMLElement_Mapping, YAMLElement_Sequence, YAMLElement_Object, YAMLContent_create_Z1C3A29C9, YAMLElement_Value } from '../fable_modules/YAMLicious.1.0.0-alpha.11/YAMLiciousTypes.fs.js';
7
- import { choose, isEmpty, head, tail, empty, map as map$1, exists, tryPick, mapIndexed, cons, singleton, ofArray, tryHead } from '../../node_modules/@fable-org/fable-library-js/List.js';
8
- import { read, object, string, bool, resizearray, int } from '../fable_modules/YAMLicious.1.0.0-alpha.11/Decode.fs.js';
9
- import { compare } from '../../node_modules/@fable-org/fable-library-js/BigInt.js';
10
- import { tryParse } from '../../node_modules/@fable-org/fable-library-js/Boolean.js';
11
- import { tryParse as tryParse$1 } from '../../node_modules/@fable-org/fable-library-js/Long.js';
12
- import { tryParse as tryParse$2 } from '../../node_modules/@fable-org/fable-library-js/Double.js';
13
- import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
14
- import { setProperty } from '../fable_modules/DynamicObj.7.1.0/DynObj.fs.js';
15
- import { LoadListingEnum_tryParse_Z721C83C5, InitialWorkDirEntry_StringEntry, InitialWorkDirEntry_DirentEntry, InitialWorkDirEntry_DirectoryEntry, InitialWorkDirEntry_FileEntry, DockerRequirement, EnvironmentDef, LoadListingRequirementValue, ResourceRequirementInstance, Requirement_WorkReuseExpressionRequirement, Requirement_WorkReuseRequirement, WorkReuseRequirementValue, Requirement_NetworkAccessExpressionRequirement, Requirement_NetworkAccessRequirement, NetworkAccessRequirementValue, InplaceUpdateRequirementValue, ToolTimeLimitValue_ToolTimeLimitExpression, ToolTimeLimitValue_ToolTimeLimitSeconds, InlineJavascriptRequirementValue, Requirement_StepInputExpressionRequirement, Requirement_MultipleInputFeatureRequirement, Requirement_ScatterFeatureRequirement, Requirement_SubworkflowFeatureRequirement, Requirement_ToolTimeLimitRequirement, Requirement_InplaceUpdateRequirement, Requirement_ResourceRequirement, Requirement_ShellCommandRequirement, Requirement_EnvVarRequirement, Requirement_InitialWorkDirRequirement, Requirement_LoadListingRequirement, Requirement_SoftwareRequirement, Requirement_DockerRequirement, Requirement_SchemaDefRequirement, Requirement_InlineJavascriptRequirement, HintEntry_UnknownHint, HintUnknownValue, HintEntry_KnownHint } from './Requirements.js';
16
- import { FileInstance, DirectoryInstance, SchemaSaladString_Literal, SchemaSaladString_Import, SchemaSaladString_Include, SchemaSaladStringModule_toDirectiveString, DirentInstance, CWLType_Dirent, CWLType_Null, CWLType_Stdout, CWLType_Boolean, CWLType_Double, CWLType_Float, CWLType_Long, CWLType_Int, CWLType_String, CWLType_Directory, CWLType_File, CWLType_Array, InputArraySchema, InputRecordField, InputRecordSchema, InputEnumSchema, CWLType_Union, CWLType_Enum, CWLType_Record, SoftwarePackage, SchemaDefRequirementType, CWLType_file, CWLType_directory } from './CWLTypes.js';
17
- import { toList, toArray, delay, map as map$2, head as head$1, length } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
1
+ import { getEnumerator, disposeSafe, Exception, defaultOf, comparePrimitives } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
2
+ import { Record, FSharpRef } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
3
+ import { value, unwrap, defaultArg, some } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
4
+ import { record_type, string_type, option_type, array_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
5
+ import { toText, printf, concat, interpolate, substring, replace, trim } from '../../node_modules/@fable-org/fable-library-ts/String.js';
6
+ import { YAMLElement_Mapping, YAMLElement_Sequence, YAMLElement_Object$, YAMLContent_create_Z1C3A29C9, YAMLElement_Value } from '../fable_modules/YAMLicious.1.0.0/YAMLiciousTypes.fs.js';
7
+ import { choose, isEmpty, head, tail, empty, map, exists, tryPick, mapIndexed, cons, singleton, ofArray, append, filter } from '../../node_modules/@fable-org/fable-library-ts/List.js';
8
+ import { KeyNotFoundException } from '../../node_modules/@fable-org/fable-library-ts/System.Collections.Generic.js';
9
+ import { ArgumentException, FormatException, InvalidOperationException, ArgumentException_$ctor_Z721C83C5, InvalidOperationException_$ctor_Z721C83C5 } from '../../node_modules/@fable-org/fable-library-ts/System.js';
10
+ import { read, object, string, bool, resizearray, int } from '../fable_modules/YAMLicious.1.0.0/Decode.fs.js';
11
+ import { compare } from '../../node_modules/@fable-org/fable-library-ts/BigInt.js';
12
+ import { tryParse } from '../../node_modules/@fable-org/fable-library-ts/Boolean.js';
13
+ import { tryParse as tryParse$1 } from '../../node_modules/@fable-org/fable-library-ts/Long.js';
14
+ import { tryParse as tryParse$2 } from '../../node_modules/@fable-org/fable-library-ts/Double.js';
15
+ import { DynamicObj } from '../fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js';
16
+ import { setProperty } from '../fable_modules/DynamicObj.8.0.0/DynObj.fs.js';
17
+ import { LoadListingEnum_tryParse_Z721C83C5, InitialWorkDirEntry_StringEntry, InitialWorkDirEntry_DirentEntry, InitialWorkDirEntry_DirectoryEntry, InitialWorkDirEntry_FileEntry, DockerRequirement, EnvironmentDef, LoadListingRequirementValue, ResourceRequirementInstance, Requirement_WorkReuseExpressionRequirement, Requirement_WorkReuseRequirement, WorkReuseRequirementValue, Requirement_NetworkAccessExpressionRequirement, Requirement_NetworkAccessRequirement, NetworkAccessRequirementValue, InplaceUpdateRequirementValue, ToolTimeLimitValue_ToolTimeLimitExpression, ToolTimeLimitValue_ToolTimeLimitSeconds, InlineJavascriptRequirementValue, Requirement, Requirement_ToolTimeLimitRequirement, Requirement_InplaceUpdateRequirement, Requirement_ResourceRequirement, Requirement_EnvVarRequirement, Requirement_InitialWorkDirRequirement, Requirement_LoadListingRequirement, Requirement_SoftwareRequirement, Requirement_DockerRequirement, Requirement_SchemaDefRequirement, Requirement_InlineJavascriptRequirement, HintEntry_UnknownHint, HintUnknownValue, HintEntry_KnownHint } from './Requirements.js';
18
+ import { FileInstance, DirectoryInstance, SchemaSaladString_Literal, SchemaSaladString_Import, SchemaSaladString_Include, SchemaSaladStringModule_toDirectiveString, DirentInstance, CWLType_Dirent, CWLType, CWLType_Directory, CWLType_File, CWLType_Array$, InputArraySchema, InputRecordField, InputRecordSchema, InputEnumSchema, CWLType_Union, CWLType_Enum, CWLType_Record, SoftwarePackage, SchemaDefRequirementType } from './CWLTypes.js';
19
+ import { toList, toArray, delay, map as map$1, head as head$1, length } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
18
20
  import { OutputBinding, CWLOutput, OutputSource_Single, OutputSource_Multiple } from './Outputs.js';
19
- import { getItemFromDict } from '../../node_modules/@fable-org/fable-library-js/MapUtil.js';
20
- import { unionMany } from '../../node_modules/@fable-org/fable-library-js/Set.js';
21
+ import { item } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
22
+ import { getItemFromDict } from '../../node_modules/@fable-org/fable-library-ts/MapUtil.js';
23
+ import { unionMany } from '../../node_modules/@fable-org/fable-library-ts/Set.js';
21
24
  import { InputBinding, CWLInput } from './Inputs.js';
22
25
  import { LinkMergeMethod, PickValueMethod, ScatterMethod, StepInput, StepOutputParameter, StepOutput_StepOutputRecord, StepOutput_StepOutputString, WorkflowStepRun_RunString, WorkflowStep } from './WorkflowSteps.js';
23
26
  import { WorkflowStepRunOps_fromTool, WorkflowStepRunOps_fromOperation, WorkflowStepRunOps_fromExpressionTool, WorkflowStepRunOps_fromWorkflow, CWLProcessingUnit_Operation, CWLProcessingUnit_ExpressionTool, CWLProcessingUnit_Workflow, CWLProcessingUnit_CommandLineTool } from './CWLProcessingUnit.js';
24
- import { CWLToolDescription } from './ToolDescription.js';
27
+ import { CWLWorkflowDescription } from './WorkflowDescription.js';
25
28
  import { CWLExpressionToolDescription } from './ExpressionToolDescription.js';
26
29
  import { CWLOperationDescription } from './OperationDescription.js';
27
- import { CWLWorkflowDescription } from './WorkflowDescription.js';
30
+ import { CWLToolDescription } from './ToolDescription.js';
31
+ import { CWLParameterValue_String$, CWLParameterValue_Record, CWLParameterRecordField, CWLParameterValue_Directory, CWLParameterValue_File, CWLParameterValue_Array$, CWLParameterValue_Int, CWLParameterValue_Float, CWLParameterValue_Boolean$, CWLParameterValue, CWLParameterValueModule_tryInferType } from './ParameterValue.js';
28
32
  import { CWLParameterReference } from './ParameterReference.js';
29
33
 
30
34
  function ResizeArray_map(f, a) {
@@ -62,18 +66,18 @@ function Decode_DecodeResult$1_$reflection(gen0) {
62
66
  return record_type("ARCtrl.CWL.Decode.DecodeResult`1", [gen0], Decode_DecodeResult$1, () => [["Value", gen0], ["Warnings", array_type(Decode_DecodeWarning_$reflection())]]);
63
67
  }
64
68
  function Decode_addWarning(warnings, path, message, raw) {
65
- let clo;
69
+ let mapping = void 0, clo = void 0, option_1 = void 0;
66
70
  if (warnings == null) {
67
71
  } else {
68
72
  const warningList = value(warnings);
69
- void warningList.push(new Decode_DecodeWarning(path, message, map((clo = toText(printf("%A")), clo), raw)));
73
+ void warningList.push(new Decode_DecodeWarning(path, message, (mapping = (clo = toText(printf("%A")), clo), option_1 = raw, option_1 != null ? mapping(value(option_1)) : void 0)));
70
74
  }
71
75
  }
72
76
  function Decode_removeYamlComments(yamlElement) {
73
77
  switch (yamlElement.tag) {
74
78
  case /* Object */
75
79
  3:
76
- return YAMLElement_Object(choose((element) => {
80
+ return YAMLElement_Object$(choose((element) => {
77
81
  if (element.tag === /* Comment */
78
82
  4) {
79
83
  return void 0;
@@ -85,7 +89,7 @@ function Decode_removeYamlComments(yamlElement) {
85
89
  2:
86
90
  return YAMLElement_Sequence(choose((element_1) => {
87
91
  const matchValue = Decode_removeYamlComments(element_1);
88
- let matchResult, other_1;
92
+ let matchResult = void 0, other_1 = void 0;
89
93
  switch (matchValue.tag) {
90
94
  case /* Comment */
91
95
  4: {
@@ -124,8 +128,24 @@ function Decode_removeYamlComments(yamlElement) {
124
128
  }
125
129
  }
126
130
  function Decode_isRecoverableDecodingError(ex) {
127
- let matchResult;
128
- if (ex.message.indexOf("Expected") >= 0) {
131
+ let matchResult = void 0;
132
+ if (ex instanceof KeyNotFoundException) {
133
+ matchResult = 0;
134
+ } else if (ex instanceof ArgumentException) {
135
+ matchResult = 1;
136
+ } else if (ex instanceof FormatException) {
137
+ matchResult = 2;
138
+ } else if (ex instanceof InvalidOperationException) {
139
+ if (ex.message.indexOf("decode") >= 0) {
140
+ matchResult = 3;
141
+ } else if (ex.message.indexOf("Expected") >= 0) {
142
+ matchResult = 4;
143
+ } else if (ex.message.indexOf("Required") >= 0) {
144
+ matchResult = 5;
145
+ } else {
146
+ matchResult = 6;
147
+ }
148
+ } else if (ex.message.indexOf("Expected") >= 0) {
129
149
  matchResult = 4;
130
150
  } else if (ex.message.indexOf("Required") >= 0) {
131
151
  matchResult = 5;
@@ -157,8 +177,8 @@ function Decode_boxOverflowInt64(value) {
157
177
  }
158
178
  function Decode_overflowDecoder(dynObj, dict) {
159
179
  const decodeOverflowValue = (value_1) => {
160
- let collection;
161
- let matchResult, v_3, items, other;
180
+ let collection = void 0;
181
+ let matchResult = void 0, v_3 = void 0, items = void 0, other = void 0;
162
182
  switch (value_1.tag) {
163
183
  case /* Value */
164
184
  1: {
@@ -213,7 +233,7 @@ function Decode_overflowDecoder(dynObj, dict) {
213
233
  case 0: {
214
234
  const value$1 = v_3;
215
235
  const matchValue = value$1.Style;
216
- let matchResult_1;
236
+ let matchResult_1 = void 0;
217
237
  if (matchValue != null) {
218
238
  switch (value(matchValue).tag) {
219
239
  case /* SingleQuoted */
@@ -267,7 +287,7 @@ function Decode_overflowDecoder(dynObj, dict) {
267
287
  }
268
288
  }
269
289
  case 1:
270
- return collection = map$1(decodeOverflowValue, items), Array.from(collection);
290
+ return collection = map(decodeOverflowValue, items), Array.from(collection);
271
291
  case 2:
272
292
  return Decode_overflowDecoder(new DynamicObj(), object((get$) => get$.Overflow.FieldList(empty()), value_1));
273
293
  default:
@@ -286,7 +306,7 @@ function Decode_overflowDecoder(dynObj, dict) {
286
306
  return dynObj;
287
307
  }
288
308
  function Decode_isIgnorableYamlNoise(value) {
289
- let matchResult;
309
+ let matchResult = void 0;
290
310
  switch (value.tag) {
291
311
  case /* Comment */
292
312
  4: {
@@ -315,11 +335,11 @@ function Decode_isIgnorableYamlNoise(value) {
315
335
  }
316
336
  }
317
337
  function Decode_tryGetPresentField(fieldName, decoder, value) {
318
- let matchResult, fields_1;
338
+ let matchResult = void 0, fields_1 = void 0;
319
339
  if (value.tag === /* Object */
320
340
  3) {
321
341
  if (exists((_arg) => {
322
- let matchResult_1, key_1;
342
+ let matchResult_1 = void 0, key_1 = void 0;
323
343
  if (_arg.tag === /* Mapping */
324
344
  0) {
325
345
  if (_arg.fields[0].Value === fieldName) {
@@ -366,11 +386,11 @@ function Decode_tryGetYamlField(fieldName, value) {
366
386
  return Decode_tryGetPresentField(fieldName, (x) => x, value);
367
387
  }
368
388
  function Decode_tryGetIntArrayField(fieldName, value) {
369
- return Decode_tryGetPresentField(fieldName, (value_1) => resizearray(int, value_1), value);
389
+ return Decode_tryGetPresentField(fieldName, (value_1) => resizearray((value_2) => int(value_2) | 0, value_1), value);
370
390
  }
371
391
  function Decode_tryGetInt64Field(fieldName, value) {
372
392
  return Decode_tryGetPresentField(fieldName, (_arg) => {
373
- let matchResult, scalar, other;
393
+ let matchResult = void 0, scalar = void 0, other = void 0;
374
394
  switch (_arg.tag) {
375
395
  case /* Value */
376
396
  1: {
@@ -415,23 +435,24 @@ function Decode_tryGetInt64Field(fieldName, value) {
415
435
  if (matchValue[0]) {
416
436
  return matchValue[1];
417
437
  } else {
418
- throw new Error(`Invalid int64 value for ${fieldName}: ${scalar.Value}`);
438
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid int64 value for ", fieldName, ": ", scalar.Value));
419
439
  }
420
440
  }
421
441
  default:
422
- throw new Error(`Invalid int64 value for ${fieldName}: ${other}`);
442
+ throw ArgumentException_$ctor_Z721C83C5(`Invalid int64 value for ${fieldName}: ${other}`);
423
443
  }
424
444
  }, value);
425
445
  }
426
446
  function Decode_tryGetLoadListingField(fieldName, value$1) {
427
- return map((loadListingValue) => {
428
- const matchValue = LoadListingEnum_tryParse_Z721C83C5(loadListingValue);
429
- if (matchValue == null) {
430
- throw new Error(`Invalid loadListing value '${loadListingValue}'. Expected one of: no_listing, shallow_listing, deep_listing.`);
431
- } else {
432
- return value(matchValue);
433
- }
434
- }, Decode_tryGetStringField(fieldName, value$1));
447
+ let loadListingValue = void 0, matchValue = void 0;
448
+ const option_1 = Decode_tryGetStringField(fieldName, value$1);
449
+ if (option_1 != null) {
450
+ return loadListingValue = value(option_1), matchValue = LoadListingEnum_tryParse_Z721C83C5(loadListingValue), matchValue == null ? (() => {
451
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid loadListing value '", loadListingValue, "'. Expected one of: no_listing, shallow_listing, deep_listing."));
452
+ })() : value(matchValue);
453
+ } else {
454
+ return void 0;
455
+ }
435
456
  }
436
457
  function Decode_overflowIntoDynamicObj(dynObj, knownFields, value) {
437
458
  if (value.tag === /* Object */
@@ -451,7 +472,7 @@ function Decode_decodeDirectoryInstanceFields(element) {
451
472
  return directory;
452
473
  }
453
474
  function Decode_decodeSchemaSaladString(yEle) {
454
- let matchResult, v, c, v_1;
475
+ let matchResult = void 0, v = void 0, c = void 0, v_1 = void 0;
455
476
  switch (yEle.tag) {
456
477
  case /* Value */
457
478
  1: {
@@ -542,7 +563,7 @@ function Decode_decodeSchemaSaladString(yEle) {
542
563
  }
543
564
  }
544
565
  default:
545
- throw new Error(toText(interpolate("Unexpected YAMLElement format in decodeSchemaSaladString: %A%P()", [yEle])));
566
+ throw ArgumentException_$ctor_Z721C83C5(`Unexpected YAMLElement format in decodeSchemaSaladString: ${interpolate("%A%P()", [yEle])}`);
546
567
  }
547
568
  }
548
569
  function Decode_decodeStringOrExpression(yEle) {
@@ -550,7 +571,7 @@ function Decode_decodeStringOrExpression(yEle) {
550
571
  }
551
572
  function Decode_outputBindingGlobDecoder(value) {
552
573
  return object((get$) => {
553
- let objectArg, objectArg_1, objectArg_2;
574
+ let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0;
554
575
  const binding = new OutputBinding(unwrap((objectArg = get$.Optional, objectArg.Field("glob", string))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("loadContents", bool))), unwrap(Decode_tryGetLoadListingField("loadListing", value)), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("outputEval", string))));
555
576
  Decode_overflowIntoDynamicObj(binding, toList(OutputBinding.KnownFieldNames), value);
556
577
  return binding;
@@ -561,7 +582,7 @@ const Decode_outputBindingDecoder = (value_1) => object((get$) => {
561
582
  return objectArg.Field("outputBinding", Decode_outputBindingGlobDecoder);
562
583
  }, value_1);
563
584
  function Decode_decodeStringArrayOrScalar(value) {
564
- let matchResult, items;
585
+ let matchResult = void 0, items = void 0;
565
586
  switch (value.tag) {
566
587
  case /* Object */
567
588
  3: {
@@ -593,7 +614,7 @@ function Decode_decodeStringArrayOrScalar(value) {
593
614
  }
594
615
  switch (matchResult) {
595
616
  case 0: {
596
- const collection = map$1(Decode_decodeStringOrExpression, items);
617
+ const collection = map(Decode_decodeStringOrExpression, items);
597
618
  return Array.from(collection);
598
619
  }
599
620
  default:
@@ -606,7 +627,7 @@ const Decode_outputSourceDecoder = (value_1) => object((get$) => {
606
627
  }, value_1);
607
628
  function Decode_direntDecoder(value) {
608
629
  return object((get$) => {
609
- let objectArg, objectArg_1, objectArg_2;
630
+ let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0;
610
631
  const dirent = new DirentInstance((objectArg = get$.Required, objectArg.Field("entry", Decode_decodeSchemaSaladString)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("entryname", Decode_decodeSchemaSaladString))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("writable", bool))));
611
632
  Decode_overflowIntoDynamicObj(dirent, toList(DirentInstance.KnownFieldNames), value);
612
633
  return CWLType_Dirent(dirent);
@@ -618,7 +639,7 @@ function Decode_initialWorkDirEntryDecoder(value$1) {
618
639
  3: {
619
640
  const mappings = value$1.fields[0];
620
641
  if (exists((_arg) => {
621
- let matchResult, k_1;
642
+ let matchResult = void 0, k_1 = void 0;
622
643
  if (_arg.tag === /* Mapping */
623
644
  0) {
624
645
  if (_arg.fields[0].Value === "entry") {
@@ -642,12 +663,11 @@ function Decode_initialWorkDirEntryDecoder(value$1) {
642
663
  2) {
643
664
  return InitialWorkDirEntry_DirentEntry(matchValue.fields[0]);
644
665
  } else {
645
- throw new Error("Unexpected InitialWorkDir Dirent decoding result.");
666
+ throw ArgumentException_$ctor_Z721C83C5("Unexpected InitialWorkDir Dirent decoding result.");
646
667
  }
647
668
  } else {
648
669
  const classValue = tryPick((_arg_1) => {
649
- let v, v_1;
650
- let matchResult_1, k_4, v_2, k_5, v_3;
670
+ let matchResult_1 = void 0, k_4 = void 0, v_2 = void 0, k_5 = void 0, v_3 = void 0;
651
671
  if (_arg_1.tag === /* Mapping */
652
672
  0) {
653
673
  switch (_arg_1.fields[1].tag) {
@@ -657,7 +677,7 @@ function Decode_initialWorkDirEntryDecoder(value$1) {
657
677
  if (head(_arg_1.fields[1].fields[0]).tag === /* Value */
658
678
  1) {
659
679
  if (isEmpty(tail(_arg_1.fields[1].fields[0]))) {
660
- if (v = head(_arg_1.fields[1].fields[0]).fields[0], _arg_1.fields[0].Value === "class") {
680
+ if (head(_arg_1.fields[1].fields[0]).fields[0], _arg_1.fields[0].Value === "class") {
661
681
  matchResult_1 = 0;
662
682
  k_4 = _arg_1.fields[0];
663
683
  v_2 = head(_arg_1.fields[1].fields[0]).fields[0];
@@ -677,7 +697,7 @@ function Decode_initialWorkDirEntryDecoder(value$1) {
677
697
  }
678
698
  case /* Value */
679
699
  1: {
680
- if (v_1 = _arg_1.fields[1].fields[0], _arg_1.fields[0].Value === "class") {
700
+ if (_arg_1.fields[1].fields[0], _arg_1.fields[0].Value === "class") {
681
701
  matchResult_1 = 1;
682
702
  k_5 = _arg_1.fields[0];
683
703
  v_3 = _arg_1.fields[1].fields[0];
@@ -701,7 +721,7 @@ function Decode_initialWorkDirEntryDecoder(value$1) {
701
721
  return void 0;
702
722
  }
703
723
  }, mappings);
704
- let matchResult_2;
724
+ let matchResult_2 = void 0;
705
725
  if (classValue != null) {
706
726
  switch (value(classValue)) {
707
727
  case "File": {
@@ -732,7 +752,7 @@ function Decode_initialWorkDirEntryDecoder(value$1) {
732
752
  1:
733
753
  return InitialWorkDirEntry_StringEntry(Decode_decodeSchemaSaladString(value$1));
734
754
  default:
735
- throw new Error(toText(interpolate("Invalid InitialWorkDir listing entry: %A%P()", [value$1])));
755
+ throw ArgumentException_$ctor_Z721C83C5(`Invalid InitialWorkDir listing entry: ${interpolate("%A%P()", [value$1])}`);
736
756
  }
737
757
  }
738
758
  function Decode_cwlSimpleTypeFromString(s) {
@@ -742,23 +762,23 @@ function Decode_cwlSimpleTypeFromString(s) {
742
762
  case "Directory":
743
763
  return CWLType_Directory(new DirectoryInstance());
744
764
  case "string":
745
- return CWLType_String();
765
+ return CWLType.String$;
746
766
  case "int":
747
- return CWLType_Int();
767
+ return CWLType.Int;
748
768
  case "long":
749
- return CWLType_Long();
769
+ return CWLType.Long;
750
770
  case "float":
751
- return CWLType_Float();
771
+ return CWLType.Float;
752
772
  case "double":
753
- return CWLType_Double();
773
+ return CWLType.Double;
754
774
  case "boolean":
755
- return CWLType_Boolean();
775
+ return CWLType.Boolean$;
756
776
  case "stdout":
757
- return CWLType_Stdout();
777
+ return CWLType.Stdout;
758
778
  case "null":
759
- return CWLType_Null();
779
+ return CWLType.Null;
760
780
  default:
761
- throw new Error(`Invalid CWL simple type: ${s}`);
781
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid CWL simple type: ", s));
762
782
  }
763
783
  }
764
784
  function Decode_parseArrayShorthand(typeStr) {
@@ -767,7 +787,7 @@ function Decode_parseArrayShorthand(typeStr) {
767
787
  const matchValue = Decode_parseArrayShorthand(innerType);
768
788
  if (matchValue == null) {
769
789
  try {
770
- return CWLType_Array(new InputArraySchema(Decode_cwlSimpleTypeFromString(innerType)));
790
+ return CWLType_Array$(new InputArraySchema(Decode_cwlSimpleTypeFromString(innerType)));
771
791
  } catch (matchValue_1) {
772
792
  if (Decode_isRecoverableDecodingError(matchValue_1)) {
773
793
  return void 0;
@@ -776,7 +796,7 @@ function Decode_parseArrayShorthand(typeStr) {
776
796
  }
777
797
  }
778
798
  } else {
779
- return CWLType_Array(new InputArraySchema(value(matchValue)));
799
+ return CWLType_Array$(new InputArraySchema(value(matchValue)));
780
800
  }
781
801
  } else {
782
802
  return void 0;
@@ -784,7 +804,7 @@ function Decode_parseArrayShorthand(typeStr) {
784
804
  }
785
805
  function Decode_inputArraySchemaDecoder(value) {
786
806
  return object((get$) => {
787
- let objectArg, objectArg_1, objectArg_2, objectArg_3;
807
+ let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0;
788
808
  const schema = new InputArraySchema(Decode_cwlTypeDecoder$0027((objectArg = get$.Required, objectArg.Field("items", (x) => x))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("label", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("doc", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("name", string))));
789
809
  Decode_overflowIntoDynamicObj(schema, toList(InputArraySchema.KnownFieldNames), value);
790
810
  return schema;
@@ -792,7 +812,7 @@ function Decode_inputArraySchemaDecoder(value) {
792
812
  }
793
813
  function Decode_inputRecordFieldDecoder(value) {
794
814
  return object((get$) => {
795
- let objectArg, objectArg_1, objectArg_2, objectArg_3;
815
+ let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0;
796
816
  const field = new InputRecordField((objectArg = get$.Required, objectArg.Field("name", string)), Decode_cwlTypeDecoder$0027((objectArg_1 = get$.Required, objectArg_1.Field("type", (x) => x))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("doc", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("label", string))));
797
817
  Decode_overflowIntoDynamicObj(field, toList(InputRecordField.KnownFieldNames), value);
798
818
  return field;
@@ -834,7 +854,7 @@ function Decode_tryDecodeFieldsAsMap(element) {
834
854
  }
835
855
  function Decode_inputRecordSchemaDecoder(value$1) {
836
856
  return object((get$) => {
837
- let fieldsElement, objectArg, element, matchValue, objectArg_1, objectArg_2, objectArg_3;
857
+ let fieldsElement = void 0, objectArg = void 0, element = void 0, matchValue = void 0, objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0;
838
858
  const schema = new InputRecordSchema(unwrap((fieldsElement = (objectArg = get$.Optional, objectArg.Field("fields", (x) => x)), fieldsElement == null ? void 0 : value(fieldsElement).tag === /* Object */
839
859
  3 ? isEmpty(value(fieldsElement).fields[0]) ? [] : (element = value(fieldsElement), matchValue = Decode_tryDecodeFieldsAsArray(element), matchValue == null ? Decode_tryDecodeFieldsAsMap(element) : value(matchValue)) : (element = value(fieldsElement), matchValue = Decode_tryDecodeFieldsAsArray(element), matchValue == null ? Decode_tryDecodeFieldsAsMap(element) : value(matchValue)))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("label", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("doc", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("name", string))));
840
860
  Decode_overflowIntoDynamicObj(schema, toList(InputRecordSchema.KnownFieldNames), value$1);
@@ -843,20 +863,14 @@ function Decode_inputRecordSchemaDecoder(value$1) {
843
863
  }
844
864
  function Decode_inputEnumSchemaDecoder(value) {
845
865
  return object((get$) => {
846
- let objectArg_1, objectArg_2, objectArg_3;
847
- let symbols;
848
- const objectArg = get$.Required;
849
- symbols = objectArg.Field("symbols", (value_1) => resizearray(string, value_1));
850
- if (symbols.length === 0) {
851
- throw new Error("CWL enum schema must define at least one symbol.");
852
- }
853
- const schema = new InputEnumSchema(symbols, unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("label", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("doc", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("name", string))));
866
+ let objectArg = void 0, objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0;
867
+ const schema = new InputEnumSchema((objectArg = get$.Required, objectArg.Field("symbols", (value_1) => resizearray(string, value_1))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("label", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("doc", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("name", string))));
854
868
  Decode_overflowIntoDynamicObj(schema, toList(InputEnumSchema.KnownFieldNames), value);
855
869
  return schema;
856
870
  }, value);
857
871
  }
858
872
  function Decode_cwlTypeDecoder$0027(element) {
859
- let collection;
873
+ let collection = void 0;
860
874
  const parseTypeString = (typeStr) => {
861
875
  const patternInput = typeStr.endsWith("?") ? [replace(typeStr, "?", ""), true] : [typeStr, false];
862
876
  const stripped = patternInput[0];
@@ -864,12 +878,12 @@ function Decode_cwlTypeDecoder$0027(element) {
864
878
  const matchValue = Decode_parseArrayShorthand(stripped);
865
879
  baseType = matchValue == null ? Decode_cwlSimpleTypeFromString(stripped) : value(matchValue);
866
880
  if (patternInput[1]) {
867
- return CWLType_Union([CWLType_Null(), baseType]);
881
+ return CWLType_Union([CWLType.Null, baseType]);
868
882
  } else {
869
883
  return baseType;
870
884
  }
871
885
  };
872
- let matchResult, v, items;
886
+ let matchResult = void 0, v = void 0, items = void 0;
873
887
  switch (element.tag) {
874
888
  case /* Value */
875
889
  1: {
@@ -922,14 +936,14 @@ function Decode_cwlTypeDecoder$0027(element) {
922
936
  case 0:
923
937
  return parseTypeString(v.Value);
924
938
  case 1:
925
- return CWLType_Union((collection = map$1(Decode_cwlTypeDecoder$0027, items), Array.from(collection)));
939
+ return CWLType_Union((collection = map(Decode_cwlTypeDecoder$0027, items), Array.from(collection)));
926
940
  case 2:
927
941
  return object((get$) => {
928
- let objectArg_1;
942
+ let objectArg_1 = void 0;
929
943
  let typeField;
930
944
  const objectArg = get$.Optional;
931
945
  typeField = objectArg.Field("type", (x) => x);
932
- let matchResult_1, v_1;
946
+ let matchResult_1 = void 0, v_1 = void 0;
933
947
  if (typeField != null) {
934
948
  if (value(typeField).tag === /* Object */
935
949
  3) {
@@ -963,7 +977,7 @@ function Decode_cwlTypeDecoder$0027(element) {
963
977
  case "enum":
964
978
  return CWLType_Enum(Decode_inputEnumSchemaDecoder(element));
965
979
  case "array":
966
- return CWLType_Array(Decode_inputArraySchemaDecoder(element));
980
+ return CWLType_Array$(Decode_inputArraySchemaDecoder(element));
967
981
  default: {
968
982
  const typeStr_1 = matchValue_1;
969
983
  const patternInput_1 = typeStr_1.endsWith("?") ? [replace(typeStr_1, "?", ""), true] : [typeStr_1, false];
@@ -972,11 +986,11 @@ function Decode_cwlTypeDecoder$0027(element) {
972
986
  switch (stripped_1) {
973
987
  case "File": {
974
988
  const baseType_1 = CWLType_File(Decode_decodeFileInstanceFields(element));
975
- return isOptional_1 ? CWLType_Union([CWLType_Null(), baseType_1]) : baseType_1;
989
+ return isOptional_1 ? CWLType_Union([CWLType.Null, baseType_1]) : baseType_1;
976
990
  }
977
991
  case "Directory": {
978
992
  const baseType_2 = CWLType_Directory(Decode_decodeDirectoryInstanceFields(element));
979
- return isOptional_1 ? CWLType_Union([CWLType_Null(), baseType_2]) : baseType_2;
993
+ return isOptional_1 ? CWLType_Union([CWLType.Null, baseType_2]) : baseType_2;
980
994
  }
981
995
  default:
982
996
  return parseTypeString(typeStr_1);
@@ -987,11 +1001,11 @@ function Decode_cwlTypeDecoder$0027(element) {
987
1001
  case 1:
988
1002
  return Decode_cwlTypeDecoder$0027((objectArg_1 = get$.Required, objectArg_1.Field("type", (x_1) => x_1)));
989
1003
  default:
990
- throw new Error("Unexpected type format in cwlTypeDecoder'");
1004
+ throw ArgumentException_$ctor_Z721C83C5("Unexpected type format in cwlTypeDecoder'");
991
1005
  }
992
1006
  }, element);
993
1007
  default:
994
- throw new Error("Unexpected YAMLElement in cwlTypeDecoder'");
1008
+ throw ArgumentException_$ctor_Z721C83C5("Unexpected YAMLElement in cwlTypeDecoder'");
995
1009
  }
996
1010
  }
997
1011
  function Decode_cwlTypeStringMatcher(t, get$) {
@@ -1016,51 +1030,51 @@ function Decode_cwlTypeStringMatcher(t, get$) {
1016
1030
  break;
1017
1031
  }
1018
1032
  case "string": {
1019
- cwlType = CWLType_String();
1033
+ cwlType = CWLType.String$;
1020
1034
  break;
1021
1035
  }
1022
1036
  case "int": {
1023
- cwlType = CWLType_Int();
1037
+ cwlType = CWLType.Int;
1024
1038
  break;
1025
1039
  }
1026
1040
  case "long": {
1027
- cwlType = CWLType_Long();
1041
+ cwlType = CWLType.Long;
1028
1042
  break;
1029
1043
  }
1030
1044
  case "float": {
1031
- cwlType = CWLType_Float();
1045
+ cwlType = CWLType.Float;
1032
1046
  break;
1033
1047
  }
1034
1048
  case "double": {
1035
- cwlType = CWLType_Double();
1049
+ cwlType = CWLType.Double;
1036
1050
  break;
1037
1051
  }
1038
1052
  case "boolean": {
1039
- cwlType = CWLType_Boolean();
1053
+ cwlType = CWLType.Boolean$;
1040
1054
  break;
1041
1055
  }
1042
1056
  case "stdout": {
1043
- cwlType = CWLType_Stdout();
1057
+ cwlType = CWLType.Stdout;
1044
1058
  break;
1045
1059
  }
1046
1060
  case "null": {
1047
- cwlType = CWLType_Null();
1061
+ cwlType = CWLType.Null;
1048
1062
  break;
1049
1063
  }
1050
1064
  default:
1051
- throw new Error("Invalid CWL type");
1065
+ throw new Exception("Invalid CWL type");
1052
1066
  }
1053
1067
  } else {
1054
1068
  cwlType = value(matchValue);
1055
1069
  }
1056
- return [optional ? CWLType_Union([CWLType_Null(), cwlType]) : cwlType, optional];
1070
+ return [optional ? CWLType_Union([CWLType.Null, cwlType]) : cwlType, optional];
1057
1071
  }
1058
1072
  const Decode_cwlTypeDecoder = (value_1) => object((get$) => {
1059
- let objectArg_1;
1073
+ let objectArg_1 = void 0;
1060
1074
  let cwlType;
1061
1075
  const objectArg = get$.Required;
1062
1076
  cwlType = objectArg.Field("type", (value) => {
1063
- let matchResult, v, o;
1077
+ let matchResult = void 0, v = void 0, o = void 0;
1064
1078
  switch (value.tag) {
1065
1079
  case /* Value */
1066
1080
  1: {
@@ -1106,7 +1120,7 @@ const Decode_cwlTypeDecoder = (value_1) => object((get$) => {
1106
1120
  case 2:
1107
1121
  return void 0;
1108
1122
  default:
1109
- throw new Error("Unexpected YAMLElement in cwlTypeDecoder");
1123
+ throw ArgumentException_$ctor_Z721C83C5("Unexpected YAMLElement in cwlTypeDecoder");
1110
1124
  }
1111
1125
  });
1112
1126
  if (cwlType == null) {
@@ -1116,14 +1130,14 @@ const Decode_cwlTypeDecoder = (value_1) => object((get$) => {
1116
1130
  }
1117
1131
  }, value_1);
1118
1132
  function Decode_decodeNamedOutput(name, value$1) {
1119
- let v, values, values_1;
1133
+ let v = void 0, values = void 0, values_1 = void 0;
1120
1134
  const outputBinding = Decode_outputBindingDecoder(value$1);
1121
1135
  const outputSourceValues = Decode_outputSourceDecoder(value$1);
1122
1136
  const output = new CWLOutput(name, value$1.tag === /* Object */
1123
1137
  3 ? !isEmpty(value$1.fields[0]) ? head(value$1.fields[0]).tag === /* Value */
1124
1138
  1 ? isEmpty(tail(value$1.fields[0])) ? (v = head(value$1.fields[0]).fields[0], Decode_cwlTypeStringMatcher(v.Value, defaultOf())[0]) : Decode_cwlTypeDecoder(value$1)[0] : Decode_cwlTypeDecoder(value$1)[0] : Decode_cwlTypeDecoder(value$1)[0] : Decode_cwlTypeDecoder(value$1)[0], void 0, void 0, unwrap(Decode_tryGetStringField("label", value$1)), unwrap(Decode_tryGetYamlField("secondaryFiles", value$1)), unwrap(Decode_tryGetBoolField("streamable", value$1)), unwrap(Decode_tryGetStringField("doc", value$1)), unwrap(Decode_tryGetStringField("format", value$1)));
1125
1139
  output.OutputBinding = outputBinding;
1126
- let matchResult, values_2, values_3;
1140
+ let matchResult = void 0, values_2 = void 0, values_3 = void 0;
1127
1141
  if (outputSourceValues != null) {
1128
1142
  if (values = value(outputSourceValues), values.length > 1) {
1129
1143
  matchResult = 0;
@@ -1143,7 +1157,7 @@ function Decode_decodeNamedOutput(name, value$1) {
1143
1157
  break;
1144
1158
  }
1145
1159
  case 1: {
1146
- output.OutputSource = OutputSource_Single(values_3[0]);
1160
+ output.OutputSource = OutputSource_Single(item(0, values_3));
1147
1161
  break;
1148
1162
  }
1149
1163
  }
@@ -1164,7 +1178,7 @@ function Decode_decodeOutputSequenceItem(warnings, path, index, item) {
1164
1178
  }
1165
1179
  }
1166
1180
  function Decode_outputArrayDecoderWithWarnings(warnings, path, value) {
1167
- let matchResult, items;
1181
+ let matchResult = void 0, items = void 0;
1168
1182
  switch (value.tag) {
1169
1183
  case /* Object */
1170
1184
  3: {
@@ -1201,7 +1215,7 @@ function Decode_outputArrayDecoderWithWarnings(warnings, path, value) {
1201
1215
  }
1202
1216
  default: {
1203
1217
  const dict = object((get$) => get$.Overflow.FieldList(empty()), value);
1204
- const collection_1 = toArray(delay(() => map$2((key) => Decode_decodeNamedOutput(key, getItemFromDict(dict, key)), dict.keys())));
1218
+ const collection_1 = toArray(delay(() => map$1((key) => Decode_decodeNamedOutput(key, getItemFromDict(dict, key)), dict.keys())));
1205
1219
  return Array.from(collection_1);
1206
1220
  }
1207
1221
  }
@@ -1215,8 +1229,12 @@ function Decode_outputsDecoderWithWarnings(warnings) {
1215
1229
  }
1216
1230
  const Decode_outputsDecoder = Decode_outputsDecoderWithWarnings(void 0);
1217
1231
  function Decode_dockerRequirementDecoder(get$) {
1218
- let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, objectArg_6;
1219
- const dockerFile = map(Decode_decodeSchemaSaladString, (objectArg = get$.Optional, objectArg.Field("dockerFile", (x) => x)));
1232
+ let objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0, objectArg_4 = void 0, objectArg_5 = void 0, objectArg_6 = void 0;
1233
+ let dockerFile;
1234
+ let option_1;
1235
+ const objectArg = get$.Optional;
1236
+ option_1 = objectArg.Field("dockerFile", (x) => x);
1237
+ dockerFile = option_1 != null ? Decode_decodeSchemaSaladString(value(option_1)) : void 0;
1220
1238
  return DockerRequirement.create(unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("dockerPull", string))), void 0, unwrap(dockerFile), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("dockerImageId", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("dockerLoad", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("dockerImport", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("dockerOutputDirectory", string))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("cwltool:dockerRunOptions", Decode_decodeStringArrayOrScalar))));
1221
1239
  }
1222
1240
  function Decode_envVarRequirementDecoder(get$) {
@@ -1224,7 +1242,7 @@ function Decode_envVarRequirementDecoder(get$) {
1224
1242
  let _arg;
1225
1243
  const objectArg = get$.Required;
1226
1244
  _arg = objectArg.Field("envDef", (x) => x);
1227
- let matchResult, sequence, mappings, other;
1245
+ let matchResult = void 0, sequence = void 0, mappings = void 0, other = void 0;
1228
1246
  if (_arg.tag === /* Object */
1229
1247
  3) {
1230
1248
  if (!isEmpty(_arg.fields[0])) {
@@ -1270,7 +1288,7 @@ function Decode_envVarRequirementDecoder(get$) {
1270
1288
  break;
1271
1289
  }
1272
1290
  case 1: {
1273
- envDefElement = YAMLElement_Object(mappings);
1291
+ envDefElement = YAMLElement_Object$(mappings);
1274
1292
  break;
1275
1293
  }
1276
1294
  default:
@@ -1280,7 +1298,7 @@ function Decode_envVarRequirementDecoder(get$) {
1280
1298
  case /* Sequence */
1281
1299
  2:
1282
1300
  return resizearray((value_1) => object((get2) => {
1283
- let objectArg_1, objectArg_2;
1301
+ let objectArg_1 = void 0, objectArg_2 = void 0;
1284
1302
  const env = new EnvironmentDef((objectArg_1 = get2.Required, objectArg_1.Field("envName", string)), (objectArg_2 = get2.Required, objectArg_2.Field("envValue", string)));
1285
1303
  Decode_overflowIntoDynamicObj(env, toList(EnvironmentDef.KnownFieldNames), value_1);
1286
1304
  return env;
@@ -1288,7 +1306,7 @@ function Decode_envVarRequirementDecoder(get$) {
1288
1306
  case /* Object */
1289
1307
  3: {
1290
1308
  const collection = choose((_arg_2) => {
1291
- let _arg_1, value;
1309
+ let _arg_1 = void 0, value = void 0;
1292
1310
  if (_arg_2.tag === /* Mapping */
1293
1311
  0) {
1294
1312
  return new EnvironmentDef(_arg_2.fields[0].Value, (_arg_1 = _arg_2.fields[1], _arg_1.tag === /* Value */
@@ -1302,13 +1320,13 @@ function Decode_envVarRequirementDecoder(get$) {
1302
1320
  return Array.from(collection);
1303
1321
  }
1304
1322
  default:
1305
- throw new Error("Invalid envDef format. Expected array or map.");
1323
+ throw ArgumentException_$ctor_Z721C83C5("Invalid envDef format. Expected array or map.");
1306
1324
  }
1307
1325
  }
1308
1326
  function Decode_softwareRequirementDecoder(get$) {
1309
- let objectArg;
1327
+ let objectArg = void 0;
1310
1328
  const normalizeCollectionElement = (_arg) => {
1311
- let matchResult, sequence, mappings, other;
1329
+ let matchResult = void 0, sequence = void 0, mappings = void 0, other = void 0;
1312
1330
  if (_arg.tag === /* Object */
1313
1331
  3) {
1314
1332
  if (!isEmpty(_arg.fields[0])) {
@@ -1352,7 +1370,7 @@ function Decode_softwareRequirementDecoder(get$) {
1352
1370
  case 0:
1353
1371
  return YAMLElement_Sequence(sequence);
1354
1372
  case 1:
1355
- return YAMLElement_Object(mappings);
1373
+ return YAMLElement_Object$(mappings);
1356
1374
  default:
1357
1375
  return other;
1358
1376
  }
@@ -1363,7 +1381,7 @@ function Decode_softwareRequirementDecoder(get$) {
1363
1381
  case /* Sequence */
1364
1382
  2:
1365
1383
  return resizearray((value_1) => object((get2) => {
1366
- let objectArg_1, objectArg_2, objectArg_3;
1384
+ let objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0;
1367
1385
  const package$_1 = new SoftwarePackage((objectArg_1 = get2.Required, objectArg_1.Field("package", string)), unwrap((objectArg_2 = get2.Optional, objectArg_2.Field("version", (value_3) => resizearray(string, value_3)))), unwrap((objectArg_3 = get2.Optional, objectArg_3.Field("specs", (value_5) => resizearray(string, value_5)))));
1368
1386
  Decode_overflowIntoDynamicObj(package$_1, toList(SoftwarePackage.KnownFieldNames), value_1);
1369
1387
  return package$_1;
@@ -1371,16 +1389,15 @@ function Decode_softwareRequirementDecoder(get$) {
1371
1389
  case /* Object */
1372
1390
  3: {
1373
1391
  const collection = choose((_arg_3) => {
1374
- let packageName, packageValue, normalizedPackageValue, mappings_1, package$;
1392
+ let packageName = void 0, packageValue = void 0, normalizedPackageValue = void 0, mappings_1 = void 0, package$ = void 0;
1375
1393
  if (_arg_3.tag === /* Mapping */
1376
1394
  0) {
1377
1395
  return packageName = _arg_3.fields[0].Value, packageValue = _arg_3.fields[1], normalizedPackageValue = normalizeCollectionElement(packageValue), normalizedPackageValue.tag === /* Object */
1378
1396
  3 ? isEmpty(normalizedPackageValue.fields[0]) ? new SoftwarePackage(packageName) : (mappings_1 = normalizedPackageValue.fields[0], package$ = new SoftwarePackage(packageName, unwrap(tryPick((_arg_1) => {
1379
- let v;
1380
- let matchResult_1, k_1, v_1;
1397
+ let matchResult_1 = void 0, k_1 = void 0, v_1 = void 0;
1381
1398
  if (_arg_1.tag === /* Mapping */
1382
1399
  0) {
1383
- if (v = _arg_1.fields[1], _arg_1.fields[0].Value === "version") {
1400
+ if (_arg_1.fields[1], _arg_1.fields[0].Value === "version") {
1384
1401
  matchResult_1 = 0;
1385
1402
  k_1 = _arg_1.fields[0];
1386
1403
  v_1 = _arg_1.fields[1];
@@ -1397,11 +1414,10 @@ function Decode_softwareRequirementDecoder(get$) {
1397
1414
  return void 0;
1398
1415
  }
1399
1416
  }, mappings_1)), unwrap(tryPick((_arg_2) => {
1400
- let v_2;
1401
- let matchResult_2, k_3, v_3;
1417
+ let matchResult_2 = void 0, k_3 = void 0, v_3 = void 0;
1402
1418
  if (_arg_2.tag === /* Mapping */
1403
1419
  0) {
1404
- if (v_2 = _arg_2.fields[1], _arg_2.fields[0].Value === "specs") {
1420
+ if (_arg_2.fields[1], _arg_2.fields[0].Value === "specs") {
1405
1421
  matchResult_2 = 0;
1406
1422
  k_3 = _arg_2.fields[0];
1407
1423
  v_3 = _arg_2.fields[1];
@@ -1426,14 +1442,14 @@ function Decode_softwareRequirementDecoder(get$) {
1426
1442
  return Array.from(collection);
1427
1443
  }
1428
1444
  default:
1429
- throw new Error("Invalid packages format. Expected array or map.");
1445
+ throw ArgumentException_$ctor_Z721C83C5("Invalid packages format. Expected array or map.");
1430
1446
  }
1431
1447
  }
1432
1448
  function Decode_initialWorkDirRequirementDecoder(get$) {
1433
1449
  let listingElement;
1434
1450
  const objectArg = get$.Required;
1435
1451
  listingElement = objectArg.Field("listing", (x) => x);
1436
- let matchResult;
1452
+ let matchResult = void 0;
1437
1453
  switch (listingElement.tag) {
1438
1454
  case /* Object */
1439
1455
  3: {
@@ -1469,16 +1485,16 @@ function Decode_initialWorkDirRequirementDecoder(get$) {
1469
1485
  }
1470
1486
  }
1471
1487
  function Decode_loadListingRequirementDecoder(get$) {
1472
- let objectArg, matchValue;
1488
+ let objectArg = void 0, matchValue = void 0;
1473
1489
  const loadListingValue = defaultArg((objectArg = get$.Optional, objectArg.Field("loadListing", string)), "no_listing");
1474
1490
  return new LoadListingRequirementValue((matchValue = LoadListingEnum_tryParse_Z721C83C5(loadListingValue), matchValue == null ? (() => {
1475
- throw new Error(`Invalid loadListing value '${loadListingValue}'. Expected one of: no_listing, shallow_listing, deep_listing.`);
1491
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid loadListing value '", loadListingValue, "'. Expected one of: no_listing, shallow_listing, deep_listing."));
1476
1492
  })() : value(matchValue)));
1477
1493
  }
1478
1494
  function Decode_decodeResourceScalar(element) {
1479
1495
  let matchValue;
1480
1496
  const _arg = element;
1481
- let matchResult, value$1;
1497
+ let matchResult = void 0, value$1 = void 0;
1482
1498
  switch (_arg.tag) {
1483
1499
  case /* Value */
1484
1500
  1: {
@@ -1542,8 +1558,14 @@ function Decode_decodeResourceScalar(element) {
1542
1558
  }
1543
1559
  }
1544
1560
  function Decode_optionalResourceField(get$, fieldName) {
1545
- let objectArg;
1546
- return map(Decode_decodeResourceScalar, (objectArg = get$.Optional, objectArg.Field(fieldName, (x) => x)));
1561
+ let option_1;
1562
+ const objectArg = get$.Optional;
1563
+ option_1 = objectArg.Field(fieldName, (x) => x);
1564
+ if (option_1 != null) {
1565
+ return some(Decode_decodeResourceScalar(value(option_1)));
1566
+ } else {
1567
+ return void 0;
1568
+ }
1547
1569
  }
1548
1570
  function Decode_resourceRequirementDecoder(get$) {
1549
1571
  return new ResourceRequirementInstance(Decode_optionalResourceField(get$, "coresMin"), Decode_optionalResourceField(get$, "coresMax"), Decode_optionalResourceField(get$, "ramMin"), Decode_optionalResourceField(get$, "ramMax"), Decode_optionalResourceField(get$, "tmpdirMin"), Decode_optionalResourceField(get$, "tmpdirMax"), Decode_optionalResourceField(get$, "outdirMin"), Decode_optionalResourceField(get$, "outdirMax"));
@@ -1551,7 +1573,7 @@ function Decode_resourceRequirementDecoder(get$) {
1551
1573
  function Decode_schemaDefRequirementTypeDecoder(value) {
1552
1574
  const dict = object((get$) => get$.Overflow.FieldList(empty()), value);
1553
1575
  const schemaDefKnownFields = toList(unionMany([SchemaDefRequirementType.KnownFieldNames, InputRecordSchema.KnownFieldNames, InputArraySchema.KnownFieldNames, InputEnumSchema.KnownFieldNames], {
1554
- Compare: comparePrimitives
1576
+ Compare: (x, y) => comparePrimitives(x, y) | 0
1555
1577
  }));
1556
1578
  if (dict.has("name")) {
1557
1579
  const schema = new SchemaDefRequirementType(Decode_decodeStringOrExpression(getItemFromDict(dict, "name")), Decode_cwlTypeDecoder$0027(value));
@@ -1559,7 +1581,7 @@ function Decode_schemaDefRequirementTypeDecoder(value) {
1559
1581
  return schema;
1560
1582
  } else {
1561
1583
  if (dict.size === 0) {
1562
- throw new Error("SchemaDefRequirement entry cannot be empty.");
1584
+ throw ArgumentException_$ctor_Z721C83C5("SchemaDefRequirement entry cannot be empty.");
1563
1585
  }
1564
1586
  const kv = head$1(dict);
1565
1587
  const schema_1 = new SchemaDefRequirementType(kv[0], Decode_cwlTypeDecoder$0027(kv[1]));
@@ -1572,7 +1594,7 @@ function Decode_schemaDefRequirementDecoder(get$) {
1572
1594
  return objectArg.Field("types", (value) => resizearray(Decode_schemaDefRequirementTypeDecoder, value));
1573
1595
  }
1574
1596
  function Decode_tryDecodeBoolScalar(element) {
1575
- let matchResult, value;
1597
+ let matchResult = void 0, value = void 0;
1576
1598
  switch (element.tag) {
1577
1599
  case /* Value */
1578
1600
  1: {
@@ -1651,11 +1673,11 @@ function Decode_networkAccessRequirementDecoder(get$) {
1651
1673
  }
1652
1674
  }
1653
1675
  function Decode_inplaceUpdateRequirementDecoder(get$) {
1654
- let objectArg;
1676
+ let objectArg = void 0;
1655
1677
  return new InplaceUpdateRequirementValue(defaultArg((objectArg = get$.Optional, objectArg.Field("inplaceUpdate", bool)), true));
1656
1678
  }
1657
1679
  function Decode_toolTimeLimitRequirementDecoder(get$) {
1658
- let value$1;
1680
+ let value$1 = void 0;
1659
1681
  let timeLimitElement;
1660
1682
  const objectArg = get$.Required;
1661
1683
  timeLimitElement = objectArg.Field("timelimit", (x) => x);
@@ -1675,7 +1697,7 @@ function Decode_toolTimeLimitRequirementDecoder(get$) {
1675
1697
  if (compare(matchValue[1], 0n) >= 0) {
1676
1698
  return ToolTimeLimitValue_ToolTimeLimitSeconds(matchValue[1]);
1677
1699
  } else {
1678
- throw new Error("ToolTimeLimit timelimit must be non-negative.");
1700
+ throw ArgumentException_$ctor_Z721C83C5("ToolTimeLimit timelimit must be non-negative.");
1679
1701
  }
1680
1702
  } else {
1681
1703
  return ToolTimeLimitValue_ToolTimeLimitExpression(Decode_decodeStringOrExpression(timeLimitElement));
@@ -1683,7 +1705,7 @@ function Decode_toolTimeLimitRequirementDecoder(get$) {
1683
1705
  }
1684
1706
  }
1685
1707
  function Decode_inlineJavascriptRequirementDecoder(get$) {
1686
- let objectArg;
1708
+ let objectArg = void 0;
1687
1709
  return new InlineJavascriptRequirementValue(unwrap((objectArg = get$.Optional, objectArg.Field("expressionLib", Decode_decodeStringArrayOrScalar))));
1688
1710
  }
1689
1711
  function Decode_requirementFromTypeName(cls, get$) {
@@ -1703,7 +1725,7 @@ function Decode_requirementFromTypeName(cls, get$) {
1703
1725
  case "EnvVarRequirement":
1704
1726
  return Requirement_EnvVarRequirement(Decode_envVarRequirementDecoder(get$));
1705
1727
  case "ShellCommandRequirement":
1706
- return Requirement_ShellCommandRequirement();
1728
+ return Requirement.ShellCommandRequirement;
1707
1729
  case "ResourceRequirement":
1708
1730
  return Requirement_ResourceRequirement(Decode_resourceRequirementDecoder(get$));
1709
1731
  case "WorkReuse":
@@ -1719,15 +1741,15 @@ function Decode_requirementFromTypeName(cls, get$) {
1719
1741
  case "ToolTimeLimitRequirement":
1720
1742
  return Requirement_ToolTimeLimitRequirement(Decode_toolTimeLimitRequirementDecoder(get$));
1721
1743
  case "SubworkflowFeatureRequirement":
1722
- return Requirement_SubworkflowFeatureRequirement();
1744
+ return Requirement.SubworkflowFeatureRequirement;
1723
1745
  case "ScatterFeatureRequirement":
1724
- return Requirement_ScatterFeatureRequirement();
1746
+ return Requirement.ScatterFeatureRequirement;
1725
1747
  case "MultipleInputFeatureRequirement":
1726
- return Requirement_MultipleInputFeatureRequirement();
1748
+ return Requirement.MultipleInputFeatureRequirement;
1727
1749
  case "StepInputExpressionRequirement":
1728
- return Requirement_StepInputExpressionRequirement();
1750
+ return Requirement.StepInputExpressionRequirement;
1729
1751
  default:
1730
- throw new Error(`Invalid or unsupported requirement class: ${cls}`);
1752
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid or unsupported requirement class: ", cls));
1731
1753
  }
1732
1754
  }
1733
1755
  function Decode_addRequirementPayloadOverflow(element, requirement) {
@@ -1781,7 +1803,7 @@ function Decode_addRequirementPayloadOverflow(element, requirement) {
1781
1803
  return requirement;
1782
1804
  }
1783
1805
  function Decode_requirementArrayDecoder(yEle) {
1784
- let matchResult, items, other;
1806
+ let matchResult = void 0, items = void 0, other = void 0;
1785
1807
  if (yEle.tag === /* Object */
1786
1808
  3) {
1787
1809
  if (!isEmpty(yEle.fields[0])) {
@@ -1805,25 +1827,25 @@ function Decode_requirementArrayDecoder(yEle) {
1805
1827
  }
1806
1828
  switch (matchResult) {
1807
1829
  case 0: {
1808
- const collection = map$1((ele) => object((get$) => {
1809
- let objectArg;
1830
+ const collection = map((ele) => object((get$) => {
1831
+ let objectArg = void 0;
1810
1832
  return Decode_addRequirementPayloadOverflow(ele, Decode_requirementFromTypeName((objectArg = get$.Required, objectArg.Field("class", string)), get$));
1811
1833
  }, ele), items);
1812
1834
  return Array.from(collection);
1813
1835
  }
1814
1836
  case 1:
1815
1837
  return object((get$_1) => {
1816
- const collection_1 = map$2((kv) => Decode_addRequirementPayloadOverflow(kv[1], object((get$_2) => Decode_requirementFromTypeName(kv[0], get$_2), kv[1])), get$_1.Overflow.FieldList(empty()));
1838
+ const collection_1 = map$1((kv) => Decode_addRequirementPayloadOverflow(kv[1], object((get$_2) => Decode_requirementFromTypeName(kv[0], get$_2), kv[1])), get$_1.Overflow.FieldList(empty()));
1817
1839
  return Array.from(collection_1);
1818
1840
  }, yEle);
1819
1841
  default:
1820
- throw new Error(`Invalid CWL requirements syntax: ${other}`);
1842
+ throw ArgumentException_$ctor_Z721C83C5(`Invalid CWL requirements syntax: ${other}`);
1821
1843
  }
1822
1844
  }
1823
1845
  function Decode_tryDecodeKnownRequirementFromElement(element) {
1824
1846
  try {
1825
1847
  return object((get$) => {
1826
- let objectArg;
1848
+ let objectArg = void 0;
1827
1849
  return Decode_addRequirementPayloadOverflow(element, Decode_requirementFromTypeName((objectArg = get$.Required, objectArg.Field("class", string)), get$));
1828
1850
  }, element);
1829
1851
  } catch (ex) {
@@ -1838,7 +1860,7 @@ function Decode_tryDecodeKnownRequirementFromElement(element) {
1838
1860
  }
1839
1861
  if (hintClass == null) {
1840
1862
  } else {
1841
- const knownClass = value(hintClass);
1863
+ value(hintClass);
1842
1864
  }
1843
1865
  return void 0;
1844
1866
  }
@@ -1861,7 +1883,7 @@ function Decode_decodeHintElement(element) {
1861
1883
  }
1862
1884
  }
1863
1885
  function Decode_hintArrayDecoder(yEle) {
1864
- let matchResult, items, other_1;
1886
+ let matchResult = void 0, items = void 0, other_1 = void 0;
1865
1887
  switch (yEle.tag) {
1866
1888
  case /* Object */
1867
1889
  3: {
@@ -1895,16 +1917,16 @@ function Decode_hintArrayDecoder(yEle) {
1895
1917
  }
1896
1918
  switch (matchResult) {
1897
1919
  case 0: {
1898
- const collection = map$1(Decode_decodeHintElement, items);
1920
+ const collection = map(Decode_decodeHintElement, items);
1899
1921
  return Array.from(collection);
1900
1922
  }
1901
1923
  case 1:
1902
1924
  return object((get$) => {
1903
- const collection_1 = map$2((kv) => {
1904
- let matchValue, mappings;
1925
+ const collection_1 = map$1((kv) => {
1926
+ let matchValue = void 0, mappings = void 0;
1905
1927
  return Decode_decodeHintElement((matchValue = kv[1], matchValue.tag === /* Object */
1906
1928
  3 ? (mappings = matchValue.fields[0], exists((_arg) => {
1907
- let matchResult_1, k_1;
1929
+ let matchResult_1 = void 0, k_1 = void 0;
1908
1930
  if (_arg.tag === /* Mapping */
1909
1931
  0) {
1910
1932
  if (_arg.fields[0].Value === "class") {
@@ -1922,12 +1944,12 @@ function Decode_hintArrayDecoder(yEle) {
1922
1944
  default:
1923
1945
  return false;
1924
1946
  }
1925
- }, mappings) ? kv[1] : YAMLElement_Object(cons(YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("class"), YAMLElement_Object(singleton(YAMLElement_Value(YAMLContent_create_Z1C3A29C9(kv[0]))))), mappings))) : YAMLElement_Object(ofArray([YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("class"), YAMLElement_Object(singleton(YAMLElement_Value(YAMLContent_create_Z1C3A29C9(kv[0]))))), YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("value"), matchValue)]))));
1947
+ }, mappings) ? kv[1] : YAMLElement_Object$(cons(YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("class"), YAMLElement_Object$(singleton(YAMLElement_Value(YAMLContent_create_Z1C3A29C9(kv[0]))))), mappings))) : YAMLElement_Object$(ofArray([YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("class"), YAMLElement_Object$(singleton(YAMLElement_Value(YAMLContent_create_Z1C3A29C9(kv[0]))))), YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("value"), matchValue)]))));
1926
1948
  }, get$.Overflow.FieldList(empty()));
1927
1949
  return Array.from(collection_1);
1928
1950
  }, yEle);
1929
1951
  default:
1930
- throw new Error(`Invalid CWL hints syntax: ${other_1}`);
1952
+ throw ArgumentException_$ctor_Z721C83C5(`Invalid CWL hints syntax: ${other_1}`);
1931
1953
  }
1932
1954
  }
1933
1955
  const Decode_requirementsDecoder = (value) => object((get$) => {
@@ -1941,14 +1963,14 @@ const Decode_hintsDecoder = (value) => object((get$) => {
1941
1963
  const Decode_inputBindingDecoder = (value_9) => object((get$) => {
1942
1964
  const objectArg = get$.Optional;
1943
1965
  return objectArg.Field("inputBinding", (value) => object((get$0027) => {
1944
- let objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, objectArg_6, objectArg_7;
1945
- const binding = new InputBinding(unwrap((objectArg_1 = get$0027.Optional, objectArg_1.Field("prefix", string))), unwrap((objectArg_2 = get$0027.Optional, objectArg_2.Field("position", int))), unwrap((objectArg_3 = get$0027.Optional, objectArg_3.Field("itemSeparator", string))), unwrap((objectArg_4 = get$0027.Optional, objectArg_4.Field("separate", bool))), unwrap((objectArg_5 = get$0027.Optional, objectArg_5.Field("loadContents", bool))), unwrap((objectArg_6 = get$0027.Optional, objectArg_6.Field("valueFrom", string))), unwrap((objectArg_7 = get$0027.Optional, objectArg_7.Field("shellQuote", bool))));
1966
+ let objectArg_1 = void 0, objectArg_2 = void 0, objectArg_3 = void 0, objectArg_4 = void 0, objectArg_5 = void 0, objectArg_6 = void 0, objectArg_7 = void 0;
1967
+ const binding = new InputBinding(unwrap((objectArg_1 = get$0027.Optional, objectArg_1.Field("prefix", string))), unwrap((objectArg_2 = get$0027.Optional, objectArg_2.Field("position", (value_2) => int(value_2) | 0))), unwrap((objectArg_3 = get$0027.Optional, objectArg_3.Field("itemSeparator", string))), unwrap((objectArg_4 = get$0027.Optional, objectArg_4.Field("separate", bool))), unwrap((objectArg_5 = get$0027.Optional, objectArg_5.Field("loadContents", bool))), unwrap((objectArg_6 = get$0027.Optional, objectArg_6.Field("valueFrom", string))), unwrap((objectArg_7 = get$0027.Optional, objectArg_7.Field("shellQuote", bool))));
1946
1968
  Decode_overflowIntoDynamicObj(binding, toList(InputBinding.KnownFieldNames), value);
1947
1969
  return binding;
1948
1970
  }, value));
1949
1971
  }, value_9);
1950
1972
  function Decode_decodeNamedInput(name, value) {
1951
- let v;
1973
+ let v = void 0;
1952
1974
  const inputBinding = Decode_inputBindingDecoder(value);
1953
1975
  const patternInput = value.tag === /* Object */
1954
1976
  3 ? !isEmpty(value.fields[0]) ? head(value.fields[0]).tag === /* Value */
@@ -1975,7 +1997,7 @@ function Decode_decodeInputSequenceItem(warnings, path, index, item) {
1975
1997
  }
1976
1998
  }
1977
1999
  function Decode_inputArrayDecoderWithWarnings(warnings, path, value) {
1978
- let matchResult, items;
2000
+ let matchResult = void 0, items = void 0;
1979
2001
  switch (value.tag) {
1980
2002
  case /* Object */
1981
2003
  3: {
@@ -2012,7 +2034,7 @@ function Decode_inputArrayDecoderWithWarnings(warnings, path, value) {
2012
2034
  }
2013
2035
  default: {
2014
2036
  const dict = object((get$) => get$.Overflow.FieldList(empty()), value);
2015
- const collection_1 = toArray(delay(() => map$2((key) => Decode_decodeNamedInput(key, getItemFromDict(dict, key)), dict.keys())));
2037
+ const collection_1 = toArray(delay(() => map$1((key) => Decode_decodeNamedInput(key, getItemFromDict(dict, key)), dict.keys())));
2016
2038
  return Array.from(collection_1);
2017
2039
  }
2018
2040
  }
@@ -2029,7 +2051,7 @@ const Decode_baseCommandDecoder = (value_2) => object((get$) => {
2029
2051
  let baseCommandField;
2030
2052
  const objectArg = get$.Optional;
2031
2053
  baseCommandField = objectArg.Field("baseCommand", (x) => x);
2032
- let matchResult, v, v_1, s, s_1;
2054
+ let matchResult = void 0, v = void 0, v_1 = void 0, s = void 0, s_1 = void 0;
2033
2055
  if (baseCommandField == null) {
2034
2056
  matchResult = 4;
2035
2057
  } else {
@@ -2130,7 +2152,7 @@ function Decode_stringFieldDecoder(field) {
2130
2152
  }, value_1);
2131
2153
  }
2132
2154
  function Decode_stringOrStringArrayDecoder(value) {
2133
- let matchResult, v, s;
2155
+ let matchResult = void 0, v = void 0, s = void 0;
2134
2156
  switch (value.tag) {
2135
2157
  case /* Object */
2136
2158
  3: {
@@ -2190,8 +2212,14 @@ function Decode_stringOrStringArrayDecoder(value) {
2190
2212
  }
2191
2213
  function Decode_sourceArrayFieldDecoder(field) {
2192
2214
  return (value_1) => object((get$) => {
2193
- let objectArg;
2194
- return bind(Decode_stringOrStringArrayDecoder, (objectArg = get$.Optional, objectArg.Field(field, (x) => x)));
2215
+ let option_1;
2216
+ const objectArg = get$.Optional;
2217
+ option_1 = objectArg.Field(field, (x) => x);
2218
+ if (option_1 != null) {
2219
+ return Decode_stringOrStringArrayDecoder(value(option_1));
2220
+ } else {
2221
+ return void 0;
2222
+ }
2195
2223
  }, value_1);
2196
2224
  }
2197
2225
  function Decode_linkMergeFieldDecoder(field) {
@@ -2205,7 +2233,7 @@ function Decode_linkMergeFieldDecoder(field) {
2205
2233
  const linkMergeString = value(linkMergeField);
2206
2234
  const matchValue = LinkMergeMethod.tryParse(linkMergeString);
2207
2235
  if (matchValue == null) {
2208
- throw new Error(`Invalid linkMerge value: ${linkMergeString}`);
2236
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid linkMerge value: ", linkMergeString));
2209
2237
  } else {
2210
2238
  return value(matchValue);
2211
2239
  }
@@ -2223,7 +2251,7 @@ function Decode_pickValueFieldDecoder(field) {
2223
2251
  const pickValueString = value(pickValueField);
2224
2252
  const matchValue = PickValueMethod.tryParse(pickValueString);
2225
2253
  if (matchValue == null) {
2226
- throw new Error(`Invalid pickValue value: ${pickValueString}`);
2254
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid pickValue value: ", pickValueString));
2227
2255
  } else {
2228
2256
  return value(matchValue);
2229
2257
  }
@@ -2232,8 +2260,14 @@ function Decode_pickValueFieldDecoder(field) {
2232
2260
  }
2233
2261
  function Decode_scatterFieldDecoder(field) {
2234
2262
  return (value_1) => object((get$) => {
2235
- let objectArg;
2236
- return bind(Decode_stringOrStringArrayDecoder, (objectArg = get$.Optional, objectArg.Field(field, (x) => x)));
2263
+ let option_1;
2264
+ const objectArg = get$.Optional;
2265
+ option_1 = objectArg.Field(field, (x) => x);
2266
+ if (option_1 != null) {
2267
+ return Decode_stringOrStringArrayDecoder(value(option_1));
2268
+ } else {
2269
+ return void 0;
2270
+ }
2237
2271
  }, value_1);
2238
2272
  }
2239
2273
  function Decode_scatterMethodFieldDecoder(field) {
@@ -2247,7 +2281,7 @@ function Decode_scatterMethodFieldDecoder(field) {
2247
2281
  const scatterMethodString = value(scatterMethodField);
2248
2282
  const matchValue = ScatterMethod.tryParse(scatterMethodString);
2249
2283
  if (matchValue == null) {
2250
- throw new Error(`Invalid scatterMethod value: ${scatterMethodString}`);
2284
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid scatterMethod value: ", scatterMethodString));
2251
2285
  } else {
2252
2286
  return value(matchValue);
2253
2287
  }
@@ -2255,10 +2289,16 @@ function Decode_scatterMethodFieldDecoder(field) {
2255
2289
  }, value_1);
2256
2290
  }
2257
2291
  function Decode_expressionStringOptionFieldDecoder(field) {
2258
- return (value) => object((get$) => {
2259
- let objectArg;
2260
- return map(Decode_decodeStringOrExpression, (objectArg = get$.Optional, objectArg.Field(field, (x) => x)));
2261
- }, value);
2292
+ return (value$1) => object((get$) => {
2293
+ let option_1;
2294
+ const objectArg = get$.Optional;
2295
+ option_1 = objectArg.Field(field, (x) => x);
2296
+ if (option_1 != null) {
2297
+ return Decode_decodeStringOrExpression(value(option_1));
2298
+ } else {
2299
+ return void 0;
2300
+ }
2301
+ }, value$1);
2262
2302
  }
2263
2303
  function Decode_decodeStepInputFromValue(id, value$1, allowScalarSource) {
2264
2304
  const scalarSource = allowScalarSource ? Decode_stringOrStringArrayDecoder(value$1) : void 0;
@@ -2270,7 +2310,7 @@ function Decode_decodeStepInputFromValue(id, value$1, allowScalarSource) {
2270
2310
  }
2271
2311
  function Decode_decodeStepInputsFromMap(value) {
2272
2312
  const dict = object((get$) => get$.Overflow.FieldList(empty()), value);
2273
- const collection = toArray(delay(() => map$2((key) => Decode_decodeStepInputFromValue(key, getItemFromDict(dict, key), true), dict.keys())));
2313
+ const collection = toArray(delay(() => map$1((key) => Decode_decodeStepInputFromValue(key, getItemFromDict(dict, key), true), dict.keys())));
2274
2314
  return Array.from(collection);
2275
2315
  }
2276
2316
  function Decode_decodeStepInputFromArrayItem(item) {
@@ -2296,7 +2336,7 @@ function Decode_decodeStepInputsFromArray(items) {
2296
2336
  return Decode_decodeStepInputsFromArrayWithWarnings(void 0, "in", items);
2297
2337
  }
2298
2338
  function Decode_inputStepDecoderWithWarnings(warnings, path, value) {
2299
- let matchResult, items;
2339
+ let matchResult = void 0, items = void 0;
2300
2340
  switch (value.tag) {
2301
2341
  case /* Object */
2302
2342
  3: {
@@ -2335,7 +2375,7 @@ function Decode_inputStepDecoderWithWarnings(warnings, path, value) {
2335
2375
  }
2336
2376
  const Decode_inputStepDecoder = (value) => Decode_inputStepDecoderWithWarnings(void 0, "in", value);
2337
2377
  function Decode_decodeStepOutputItem(value) {
2338
- let matchResult, v;
2378
+ let matchResult = void 0, v = void 0;
2339
2379
  switch (value.tag) {
2340
2380
  case /* Object */
2341
2381
  3: {
@@ -2380,7 +2420,7 @@ const Decode_outputStepsDecoder = (value_2) => object((get$) => {
2380
2420
  let outField;
2381
2421
  const objectArg = get$.Required;
2382
2422
  outField = objectArg.Field("out", (x) => x);
2383
- let matchResult, v_1, outputs, value_1;
2423
+ let matchResult = void 0, v_1 = void 0, outputs = void 0, value_1 = void 0;
2384
2424
  switch (outField.tag) {
2385
2425
  case /* Object */
2386
2426
  3: {
@@ -2453,7 +2493,7 @@ const Decode_outputStepsDecoder = (value_2) => object((get$) => {
2453
2493
  case 2:
2454
2494
  return [];
2455
2495
  case 3: {
2456
- const collection = map$1(Decode_decodeStepOutputItem, outputs);
2496
+ const collection = map(Decode_decodeStepOutputItem, outputs);
2457
2497
  return Array.from(collection);
2458
2498
  }
2459
2499
  default:
@@ -2473,14 +2513,20 @@ const Decode_idDecoder = (value_1) => object((get$) => {
2473
2513
  return objectArg.Field("id", string);
2474
2514
  }, value_1);
2475
2515
  const Decode_intentDecoder = (value_1) => object((get$) => {
2476
- let objectArg;
2477
- return bind(Decode_stringOrStringArrayDecoder, (objectArg = get$.Optional, objectArg.Field("intent", (x) => x)));
2516
+ let option_1;
2517
+ const objectArg = get$.Optional;
2518
+ option_1 = objectArg.Field("intent", (x) => x);
2519
+ if (option_1 != null) {
2520
+ return Decode_stringOrStringArrayDecoder(value(option_1));
2521
+ } else {
2522
+ return void 0;
2523
+ }
2478
2524
  }, value_1);
2479
2525
  function Decode_hasField(fieldName, yamlElement) {
2480
2526
  if (yamlElement.tag === /* Object */
2481
2527
  3) {
2482
2528
  return exists((_arg) => {
2483
- let matchResult, k_1;
2529
+ let matchResult = void 0, k_1 = void 0;
2484
2530
  if (_arg.tag === /* Mapping */
2485
2531
  0) {
2486
2532
  if (_arg.fields[0].Value === fieldName) {
@@ -2504,22 +2550,21 @@ function Decode_hasField(fieldName, yamlElement) {
2504
2550
  }
2505
2551
  }
2506
2552
  function Decode_withDefaultCwlVersion(defaultCwlVersion, yamlElement) {
2507
- let fields;
2508
2553
  if (yamlElement.tag === /* Object */
2509
2554
  3) {
2510
- if (fields = yamlElement.fields[0], Decode_hasField("cwlVersion", yamlElement)) {
2555
+ if (yamlElement.fields[0], Decode_hasField("cwlVersion", yamlElement)) {
2511
2556
  const fields_1 = yamlElement.fields[0];
2512
2557
  return yamlElement;
2513
2558
  } else {
2514
2559
  const fields_2 = yamlElement.fields[0];
2515
- return YAMLElement_Object(cons(YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("cwlVersion"), YAMLElement_Object(singleton(YAMLElement_Value(YAMLContent_create_Z1C3A29C9(defaultCwlVersion))))), fields_2));
2560
+ return YAMLElement_Object$(cons(YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9("cwlVersion"), YAMLElement_Object$(singleton(YAMLElement_Value(YAMLContent_create_Z1C3A29C9(defaultCwlVersion))))), fields_2));
2516
2561
  }
2517
2562
  } else {
2518
2563
  return yamlElement;
2519
2564
  }
2520
2565
  }
2521
2566
  function Decode_workflowStepRunDecoder(warnings, defaultCwlVersion, runValue) {
2522
- let matchResult, v;
2567
+ let matchResult = void 0, v = void 0;
2523
2568
  switch (runValue.tag) {
2524
2569
  case /* Object */
2525
2570
  3: {
@@ -2569,7 +2614,7 @@ function Decode_workflowStepRunDecoder(warnings, defaultCwlVersion, runValue) {
2569
2614
  }
2570
2615
  }
2571
2616
  default:
2572
- throw new Error(toText(interpolate("Unsupported run value for workflow step: %A%P()", [runValue])));
2617
+ throw ArgumentException_$ctor_Z721C83C5(`Unsupported run value for workflow step: ${interpolate("%A%P()", [runValue])}`);
2573
2618
  }
2574
2619
  }
2575
2620
  function Decode_decodeWorkflowStepFromValueWithId(warnings, defaultCwlVersion, path, stepId, value) {
@@ -2579,7 +2624,7 @@ function Decode_decodeWorkflowStepFromValueWithId(warnings, defaultCwlVersion, p
2579
2624
  }, value));
2580
2625
  const inputs = object((get$0027_1) => {
2581
2626
  let arg_3;
2582
- const path_1 = `${path}.in`;
2627
+ const path_1 = concat(path, ".in");
2583
2628
  arg_3 = (value_1) => Decode_inputStepDecoderWithWarnings(warnings, path_1, value_1);
2584
2629
  const objectArg_1 = get$0027_1.Required;
2585
2630
  return objectArg_1.Field("in", arg_3);
@@ -2615,7 +2660,7 @@ function Decode_decodeWorkflowStepFromArrayItemWithWarnings(warnings, defaultCwl
2615
2660
  }
2616
2661
  }
2617
2662
  function Decode_stepArrayDecoderWithVersion(warnings, defaultCwlVersion, value) {
2618
- let matchResult, items;
2663
+ let matchResult = void 0, items = void 0;
2619
2664
  switch (value.tag) {
2620
2665
  case /* Object */
2621
2666
  3: {
@@ -2652,7 +2697,7 @@ function Decode_stepArrayDecoderWithVersion(warnings, defaultCwlVersion, value)
2652
2697
  }
2653
2698
  default: {
2654
2699
  const dict = object((get$) => get$.Overflow.FieldList(empty()), value);
2655
- const collection_1 = toArray(delay(() => map$2((key) => Decode_decodeWorkflowStepFromValueWithId(warnings, defaultCwlVersion, `steps.${key}`, key, getItemFromDict(dict, key)), dict.keys())));
2700
+ const collection_1 = toArray(delay(() => map$1((key) => Decode_decodeWorkflowStepFromValueWithId(warnings, defaultCwlVersion, concat("steps.", key), key, getItemFromDict(dict, key)), dict.keys())));
2656
2701
  return Array.from(collection_1);
2657
2702
  }
2658
2703
  }
@@ -2750,7 +2795,7 @@ function Decode_operationDecoder(warnings, yamlCWL) {
2750
2795
  let inputs;
2751
2796
  const matchValue = Decode_inputsDecoderWithWarnings(warnings)(yamlCWL);
2752
2797
  if (matchValue == null) {
2753
- throw new Error("Inputs are required for an operation");
2798
+ throw InvalidOperationException_$ctor_Z721C83C5("Inputs are required for an operation");
2754
2799
  } else {
2755
2800
  inputs = value(matchValue);
2756
2801
  }
@@ -2790,7 +2835,7 @@ function Decode_workflowDecoder(warnings, yamlCWL) {
2790
2835
  let inputs;
2791
2836
  const matchValue = Decode_inputsDecoderWithWarnings(warnings)(yamlCWL);
2792
2837
  if (matchValue == null) {
2793
- throw new Error("Inputs are required for a workflow");
2838
+ throw InvalidOperationException_$ctor_Z721C83C5("Inputs are required for a workflow");
2794
2839
  } else {
2795
2840
  inputs = value(matchValue);
2796
2841
  }
@@ -2837,7 +2882,7 @@ function Decode_decodeCWLProcessingUnitElementWithWarnings(warnings, yamlCWL) {
2837
2882
  case "Operation":
2838
2883
  return CWLProcessingUnit_Operation(Decode_operationDecoder(warnings, yamlCWL));
2839
2884
  default:
2840
- throw new Error(`Invalid or unsupported CWL class: ${cls}`);
2885
+ throw ArgumentException_$ctor_Z721C83C5(concat("Invalid or unsupported CWL class: ", cls));
2841
2886
  }
2842
2887
  }
2843
2888
  function Decode_decodeCWLProcessingUnitElement(yamlCWL) {
@@ -2880,176 +2925,271 @@ function Decode_decodeCWLProcessingUnitWithWarnings(cwl) {
2880
2925
  function Decode_decodeCWLProcessingUnit(cwl) {
2881
2926
  return Decode_decodeCWLProcessingUnitWithWarnings(cwl).Value;
2882
2927
  }
2883
- function DecodeParameters_cwlParameterReferenceDecoder(get$, key, yEle) {
2884
- let collection, collection_1, className_2, matchValue_4, sequenceValue, scalarOrObject, matchValue_5;
2885
- const tryScalarString = (_arg) => {
2886
- let matchResult, v;
2887
- switch (_arg.tag) {
2888
- case /* Value */
2889
- 1: {
2890
- matchResult = 0;
2891
- v = _arg.fields[0];
2892
- break;
2928
+ function DecodeParameters_tryField(fieldName, yEle) {
2929
+ if (yEle.tag === /* Object */
2930
+ 3) {
2931
+ return tryPick((_arg) => {
2932
+ let matchResult = void 0, key_1 = void 0, value_1 = void 0;
2933
+ if (_arg.tag === /* Mapping */
2934
+ 0) {
2935
+ if (_arg.fields[1], _arg.fields[0].Value === fieldName) {
2936
+ matchResult = 0;
2937
+ key_1 = _arg.fields[0];
2938
+ value_1 = _arg.fields[1];
2939
+ } else {
2940
+ matchResult = 1;
2941
+ }
2942
+ } else {
2943
+ matchResult = 1;
2893
2944
  }
2894
- case /* Object */
2895
- 3: {
2896
- if (!isEmpty(_arg.fields[0])) {
2897
- if (head(_arg.fields[0]).tag === /* Value */
2898
- 1) {
2899
- if (isEmpty(tail(_arg.fields[0]))) {
2900
- matchResult = 0;
2901
- v = head(_arg.fields[0]).fields[0];
2902
- } else {
2903
- matchResult = 1;
2904
- }
2945
+ switch (matchResult) {
2946
+ case 0:
2947
+ return value_1;
2948
+ default:
2949
+ return void 0;
2950
+ }
2951
+ }, yEle.fields[0]);
2952
+ } else {
2953
+ return void 0;
2954
+ }
2955
+ }
2956
+ function DecodeParameters_tryScalarString(yEle) {
2957
+ let matchResult = void 0, value = void 0;
2958
+ switch (yEle.tag) {
2959
+ case /* Value */
2960
+ 1: {
2961
+ matchResult = 0;
2962
+ value = yEle.fields[0];
2963
+ break;
2964
+ }
2965
+ case /* Object */
2966
+ 3: {
2967
+ if (!isEmpty(yEle.fields[0])) {
2968
+ if (head(yEle.fields[0]).tag === /* Value */
2969
+ 1) {
2970
+ if (isEmpty(tail(yEle.fields[0]))) {
2971
+ matchResult = 0;
2972
+ value = head(yEle.fields[0]).fields[0];
2905
2973
  } else {
2906
2974
  matchResult = 1;
2907
2975
  }
2908
2976
  } else {
2909
2977
  matchResult = 1;
2910
2978
  }
2911
- break;
2912
- }
2913
- default:
2914
- matchResult = 1;
2915
- }
2916
- switch (matchResult) {
2917
- case 0:
2918
- return v.Value;
2919
- default:
2920
- return void 0;
2921
- }
2922
- };
2923
- const tryField = (fieldName, value) => {
2924
- try {
2925
- return object((get$_1) => {
2926
- const objectArg = get$_1.Optional;
2927
- return objectArg.Field(fieldName, (x) => x);
2928
- }, value);
2929
- } catch (matchValue) {
2930
- if (Decode_isRecoverableDecodingError(matchValue)) {
2931
- return void 0;
2932
2979
  } else {
2933
- throw matchValue;
2980
+ matchResult = 1;
2934
2981
  }
2982
+ break;
2935
2983
  }
2936
- };
2937
- const tryStringField = (fieldName_1, value_1) => bind(tryScalarString, tryField(fieldName_1, value_1));
2938
- const withOverflow = (reference, value_2) => {
2939
- Decode_overflowIntoDynamicObj(reference, toList(CWLParameterReference.KnownFieldNames), value_2);
2940
- return reference;
2941
- };
2942
- const pathValue = (value_4) => orElseWith(tryStringField("path", value_4), () => tryStringField("location", value_4));
2943
- let matchResult_1, v_1, s;
2944
- switch (yEle.tag) {
2984
+ default:
2985
+ matchResult = 1;
2986
+ }
2987
+ switch (matchResult) {
2988
+ case 0:
2989
+ return value.Value;
2990
+ default:
2991
+ return void 0;
2992
+ }
2993
+ }
2994
+ function DecodeParameters_decodeFileInstance(yEle) {
2995
+ return Decode_decodeFileInstanceFields(yEle);
2996
+ }
2997
+ function DecodeParameters_decodeDirectoryInstance(yEle) {
2998
+ return Decode_decodeDirectoryInstanceFields(yEle);
2999
+ }
3000
+ function DecodeParameters_decodeParameterValue(value$1) {
3001
+ let collection = void 0, collection_1 = void 0, collection_2 = void 0;
3002
+ let matchResult = void 0, scalar = void 0, items_1 = void 0, items_2 = void 0, trailingMappings_1 = void 0, fields = void 0, other_1 = void 0;
3003
+ switch (value$1.tag) {
2945
3004
  case /* Value */
2946
3005
  1: {
2947
- matchResult_1 = 0;
2948
- v_1 = yEle.fields[0];
3006
+ matchResult = 0;
3007
+ scalar = value$1.fields[0];
2949
3008
  break;
2950
3009
  }
2951
3010
  case /* Object */
2952
3011
  3: {
2953
- if (!isEmpty(yEle.fields[0])) {
2954
- switch (head(yEle.fields[0]).tag) {
3012
+ if (!isEmpty(value$1.fields[0])) {
3013
+ switch (head(value$1.fields[0]).tag) {
2955
3014
  case /* Value */
2956
3015
  1: {
2957
- if (isEmpty(tail(yEle.fields[0]))) {
2958
- matchResult_1 = 0;
2959
- v_1 = head(yEle.fields[0]).fields[0];
3016
+ if (isEmpty(tail(value$1.fields[0]))) {
3017
+ matchResult = 0;
3018
+ scalar = head(value$1.fields[0]).fields[0];
2960
3019
  } else {
2961
- matchResult_1 = 2;
3020
+ matchResult = 3;
3021
+ fields = value$1.fields[0];
2962
3022
  }
2963
3023
  break;
2964
3024
  }
2965
3025
  case /* Sequence */
2966
3026
  2: {
2967
- if (isEmpty(tail(yEle.fields[0]))) {
2968
- matchResult_1 = 1;
2969
- s = head(yEle.fields[0]).fields[0];
3027
+ if (isEmpty(tail(value$1.fields[0]))) {
3028
+ matchResult = 1;
3029
+ items_1 = head(value$1.fields[0]).fields[0];
3030
+ } else if (head(value$1.fields[0]).fields[0], exists((_arg) => {
3031
+ if (_arg.tag === /* Mapping */
3032
+ 0) {
3033
+ return true;
3034
+ } else {
3035
+ return false;
3036
+ }
3037
+ }, tail(value$1.fields[0]))) {
3038
+ matchResult = 2;
3039
+ items_2 = head(value$1.fields[0]).fields[0];
3040
+ trailingMappings_1 = tail(value$1.fields[0]);
2970
3041
  } else {
2971
- matchResult_1 = 2;
3042
+ matchResult = 3;
3043
+ fields = value$1.fields[0];
2972
3044
  }
2973
3045
  break;
2974
3046
  }
2975
- default:
2976
- matchResult_1 = 2;
3047
+ default: {
3048
+ matchResult = 3;
3049
+ fields = value$1.fields[0];
3050
+ }
2977
3051
  }
2978
3052
  } else {
2979
- matchResult_1 = 2;
3053
+ matchResult = 3;
3054
+ fields = value$1.fields[0];
2980
3055
  }
2981
3056
  break;
2982
3057
  }
2983
3058
  case /* Sequence */
2984
3059
  2: {
2985
- matchResult_1 = 1;
2986
- s = yEle.fields[0];
3060
+ matchResult = 1;
3061
+ items_1 = value$1.fields[0];
2987
3062
  break;
2988
3063
  }
2989
- default:
2990
- matchResult_1 = 3;
3064
+ default: {
3065
+ matchResult = 4;
3066
+ other_1 = value$1;
3067
+ }
2991
3068
  }
2992
- switch (matchResult_1) {
2993
- case 0:
2994
- return new CWLParameterReference(key, [v_1.Value]);
2995
- case 1: {
2996
- const items = s;
2997
- const matchValue_6 = tryHead(items);
2998
- if (matchValue_6 == null) {
2999
- return new CWLParameterReference(key, []);
3000
- } else {
3001
- const matchValue_7 = tryStringField("class", value(matchValue_6));
3002
- let matchResult_2, className_3;
3003
- if (matchValue_7 != null) {
3004
- if (className_2 = value(matchValue_7), className_2 === "File" ? true : className_2 === "Directory") {
3005
- matchResult_2 = 0;
3006
- className_3 = value(matchValue_7);
3069
+ switch (matchResult) {
3070
+ case 0: {
3071
+ const matchValue = scalar.Value;
3072
+ switch (matchValue) {
3073
+ case "null":
3074
+ return CWLParameterValue.Null;
3075
+ case "true":
3076
+ return CWLParameterValue_Boolean$(true);
3077
+ case "false":
3078
+ return CWLParameterValue_Boolean$(false);
3079
+ default: {
3080
+ const text = matchValue;
3081
+ let matchValue_1;
3082
+ let outArg = 0n;
3083
+ matchValue_1 = [tryParse$1(text, 7, false, 64, new FSharpRef(() => outArg, (v) => {
3084
+ outArg = v;
3085
+ })), outArg];
3086
+ if (matchValue_1[0]) {
3087
+ return CWLParameterValue_Int(matchValue_1[1]);
3007
3088
  } else {
3008
- matchResult_2 = 1;
3089
+ let matchValue_2;
3090
+ let outArg_1 = 0;
3091
+ matchValue_2 = [tryParse$2(text, new FSharpRef(() => outArg_1, (v_1) => {
3092
+ outArg_1 = v_1;
3093
+ })), outArg_1];
3094
+ if (matchValue_2[0]) {
3095
+ return CWLParameterValue_Float(matchValue_2[1]);
3096
+ } else {
3097
+ return CWLParameterValue_String$(text);
3098
+ }
3009
3099
  }
3010
- } else {
3011
- matchResult_2 = 1;
3012
- }
3013
- switch (matchResult_2) {
3014
- case 0:
3015
- return new CWLParameterReference(key, (collection = choose(pathValue, items), Array.from(collection)), CWLType_Array(new InputArraySchema(className_3 === "Directory" ? CWLType_Directory(new DirectoryInstance()) : CWLType_File(new FileInstance()))));
3016
- default:
3017
- return new CWLParameterReference(key, (collection_1 = choose(tryScalarString, items), Array.from(collection_1)));
3018
3100
  }
3019
3101
  }
3020
3102
  }
3021
- case 2: {
3022
- const value_5 = yEle;
3023
- const matchValue_1 = tryStringField("class", value_5);
3024
- const matchValue_2 = tryStringField("type", value_5);
3025
- if (matchValue_1 == null) {
3026
- if (matchValue_2 == null) {
3027
- return withOverflow(new CWLParameterReference(key, []), value_5);
3103
+ case 1:
3104
+ return CWLParameterValue_Array$((collection = map(DecodeParameters_decodeParameterValue, filter((arg) => !Decode_isIgnorableYamlNoise(arg), items_1)), Array.from(collection)));
3105
+ case 2:
3106
+ return CWLParameterValue_Array$((collection_1 = map(DecodeParameters_decodeParameterValue, map((item) => {
3107
+ if (item.tag === /* Object */
3108
+ 3) {
3109
+ return YAMLElement_Object$(append(item.fields[0], trailingMappings_1));
3028
3110
  } else {
3029
- const patternInput = Decode_cwlTypeStringMatcher(value(matchValue_2), get$);
3030
- return withOverflow(new CWLParameterReference(key, (matchValue_4 = tryField("value", value_5), matchValue_4 == null ? [] : value(matchValue_4).tag === /* Object */
3031
- 3 ? !isEmpty(value(matchValue_4).fields[0]) ? head(value(matchValue_4).fields[0]).tag === /* Sequence */
3032
- 2 ? isEmpty(tail(value(matchValue_4).fields[0])) ? (sequenceValue = value(matchValue_4), resizearray(string, sequenceValue)) : (scalarOrObject = value(matchValue_4), matchValue_5 = tryScalarString(scalarOrObject), matchValue_5 == null ? [] : [value(matchValue_5)]) : (scalarOrObject = value(matchValue_4), matchValue_5 = tryScalarString(scalarOrObject), matchValue_5 == null ? [] : [value(matchValue_5)]) : (scalarOrObject = value(matchValue_4), matchValue_5 = tryScalarString(scalarOrObject), matchValue_5 == null ? [] : [value(matchValue_5)]) : value(matchValue_4).tag === /* Sequence */
3033
- 2 ? (sequenceValue = value(matchValue_4), resizearray(string, sequenceValue)) : (scalarOrObject = value(matchValue_4), matchValue_5 = tryScalarString(scalarOrObject), matchValue_5 == null ? [] : [value(matchValue_5)])), patternInput[0]), value_5);
3111
+ return YAMLElement_Object$(cons(item, trailingMappings_1));
3112
+ }
3113
+ }, items_2)), Array.from(collection_1)));
3114
+ case 3: {
3115
+ let matchValue_3;
3116
+ const option_1 = DecodeParameters_tryField("class", value$1);
3117
+ matchValue_3 = option_1 != null ? DecodeParameters_tryScalarString(value(option_1)) : void 0;
3118
+ let matchResult_1 = void 0;
3119
+ if (matchValue_3 != null) {
3120
+ switch (value(matchValue_3)) {
3121
+ case "File": {
3122
+ matchResult_1 = 0;
3123
+ break;
3124
+ }
3125
+ case "Directory": {
3126
+ matchResult_1 = 1;
3127
+ break;
3128
+ }
3129
+ default:
3130
+ matchResult_1 = 2;
3034
3131
  }
3035
3132
  } else {
3036
- let cwlType;
3037
- const className = value(matchValue_1);
3038
- cwlType = className === "File" ? CWLType_file() : className === "Directory" ? CWLType_directory() : void 0;
3039
- return withOverflow(new CWLParameterReference(key, defaultArg(map((p) => [p], pathValue(value_5)), []), unwrap(cwlType)), value_5);
3133
+ matchResult_1 = 2;
3134
+ }
3135
+ switch (matchResult_1) {
3136
+ case 0:
3137
+ return CWLParameterValue_File(DecodeParameters_decodeFileInstance(value$1));
3138
+ case 1:
3139
+ return CWLParameterValue_Directory(DecodeParameters_decodeDirectoryInstance(value$1));
3140
+ default:
3141
+ return CWLParameterValue_Record((collection_2 = choose((_arg_1) => {
3142
+ if (_arg_1.tag === /* Mapping */
3143
+ 0) {
3144
+ return new CWLParameterRecordField(_arg_1.fields[0].Value, DecodeParameters_decodeParameterValue(_arg_1.fields[1]));
3145
+ } else {
3146
+ return void 0;
3147
+ }
3148
+ }, fields), Array.from(collection_2)));
3040
3149
  }
3041
3150
  }
3042
3151
  default:
3043
- throw new Error(toText(interpolate("Unexpected YAMLElement format in cwlParameterReferenceDecoder: %A%P()", [yEle])));
3152
+ return CWLParameterValue_String$(toText(printf("%A"))(other_1));
3153
+ }
3154
+ }
3155
+ function DecodeParameters_cwlParameterReferenceDecoder(get$, key, yEle) {
3156
+ let matchValue_4 = void 0;
3157
+ const makeReference = (value, explicitType) => {
3158
+ let option_1 = void 0;
3159
+ return new CWLParameterReference(key, void 0, value, unwrap((option_1 = explicitType, option_1 != null ? option_1 : CWLParameterValueModule_tryInferType(value))));
3160
+ };
3161
+ const withOverflow = (reference) => {
3162
+ Decode_overflowIntoDynamicObj(reference, toList(CWLParameterReference.KnownFieldNames), yEle);
3163
+ return reference;
3164
+ };
3165
+ const matchValue = DecodeParameters_tryField("type", yEle);
3166
+ const matchValue_1 = DecodeParameters_tryField("value", yEle);
3167
+ if (matchValue == null) {
3168
+ if (matchValue_1 != null) {
3169
+ const valueElement_1 = value(matchValue_1);
3170
+ return withOverflow(makeReference(DecodeParameters_decodeParameterValue(valueElement_1), void 0));
3171
+ } else {
3172
+ return withOverflow(makeReference(DecodeParameters_decodeParameterValue(yEle), void 0));
3173
+ }
3174
+ } else if (matchValue_1 == null) {
3175
+ const typeElement_1 = value(matchValue);
3176
+ return withOverflow(makeReference(CWLParameterValue.Null, (matchValue_4 = DecodeParameters_tryScalarString(typeElement_1), matchValue_4 == null ? Decode_cwlTypeDecoder$0027(typeElement_1) : Decode_cwlTypeStringMatcher(value(matchValue_4), get$)[0])));
3177
+ } else {
3178
+ const typeElement = value(matchValue);
3179
+ const valueElement = value(matchValue_1);
3180
+ let type__1;
3181
+ const matchValue_3 = DecodeParameters_tryScalarString(typeElement);
3182
+ type__1 = matchValue_3 == null ? Decode_cwlTypeDecoder$0027(typeElement) : Decode_cwlTypeStringMatcher(value(matchValue_3), get$)[0];
3183
+ return withOverflow(makeReference(DecodeParameters_decodeParameterValue(valueElement), type__1));
3044
3184
  }
3045
3185
  }
3046
3186
  const DecodeParameters_cwlparameterReferenceArrayDecoder = (value) => object((get$) => {
3047
3187
  const dict = get$.Overflow.FieldList(empty());
3048
- const collection = toArray(delay(() => map$2((ele) => DecodeParameters_cwlParameterReferenceDecoder(get$, ele[0], ele[1]), dict)));
3188
+ const collection = toArray(delay(() => map$1((ele) => DecodeParameters_cwlParameterReferenceDecoder(get$, ele[0], ele[1]), dict)));
3049
3189
  return Array.from(collection);
3050
3190
  }, value);
3051
3191
  function DecodeParameters_decodeYAMLParameterFile(yaml) {
3052
3192
  return DecodeParameters_cwlparameterReferenceArrayDecoder(read(yaml));
3053
3193
  }
3054
3194
 
3055
- export { DecodeParameters_cwlParameterReferenceDecoder, DecodeParameters_cwlparameterReferenceArrayDecoder, DecodeParameters_decodeYAMLParameterFile, Decode_DecodeResult$1, Decode_DecodeResult$1_$reflection, Decode_DecodeWarning, Decode_DecodeWarning_$reflection, Decode_addRequirementPayloadOverflow, Decode_addWarning, Decode_baseCommandDecoder, Decode_boolOptionFieldDecoder, Decode_boxOverflowInt64, Decode_classDecoder, Decode_commandLineToolDecoder, Decode_cwlSimpleTypeFromString, Decode_cwlTypeDecoder, Decode_cwlTypeDecoder$0027, Decode_cwlTypeStringMatcher, Decode_decodeCWLProcessingUnit, Decode_decodeCWLProcessingUnitElement, Decode_decodeCWLProcessingUnitElementWithWarnings, Decode_decodeCWLProcessingUnitWithWarnings, Decode_decodeCommandLineTool, Decode_decodeCommandLineToolWithWarnings, Decode_decodeDirectoryInstanceFields, Decode_decodeExpressionTool, Decode_decodeExpressionToolWithWarnings, Decode_decodeFileInstanceFields, Decode_decodeHintElement, Decode_decodeInputSequenceItem, Decode_decodeNamedInput, Decode_decodeNamedOutput, Decode_decodeOperation, Decode_decodeOperationWithWarnings, Decode_decodeOutputSequenceItem, Decode_decodeResourceScalar, Decode_decodeSchemaSaladString, Decode_decodeStepInputFromArrayItem, Decode_decodeStepInputFromValue, Decode_decodeStepInputsFromArray, Decode_decodeStepInputsFromArrayWithWarnings, Decode_decodeStepInputsFromMap, Decode_decodeStepOutputItem, Decode_decodeStringArrayOrScalar, Decode_decodeStringOrExpression, Decode_decodeWorkflow, Decode_decodeWorkflowStepFromArrayItem, Decode_decodeWorkflowStepFromArrayItemWithWarnings, Decode_decodeWorkflowStepFromValueWithId, Decode_decodeWorkflowWithWarnings, Decode_direntDecoder, Decode_docDecoder, Decode_dockerRequirementDecoder, Decode_envVarRequirementDecoder, Decode_expressionStringOptionFieldDecoder, Decode_expressionToolDecoder, Decode_hasField, Decode_hintArrayDecoder, Decode_hintsDecoder, Decode_idDecoder, Decode_initialWorkDirEntryDecoder, Decode_initialWorkDirRequirementDecoder, Decode_inlineJavascriptRequirementDecoder, Decode_inplaceUpdateRequirementDecoder, Decode_inputArrayDecoder, Decode_inputArrayDecoderWithWarnings, Decode_inputArraySchemaDecoder, Decode_inputBindingDecoder, Decode_inputEnumSchemaDecoder, Decode_inputRecordFieldDecoder, Decode_inputRecordSchemaDecoder, Decode_inputStepDecoder, Decode_inputStepDecoderWithWarnings, Decode_inputsDecoder, Decode_inputsDecoderWithWarnings, Decode_intentDecoder, Decode_isIgnorableYamlNoise, Decode_isRecoverableDecodingError, Decode_labelDecoder, Decode_linkMergeFieldDecoder, Decode_loadListingRequirementDecoder, Decode_networkAccessRequirementDecoder, Decode_operationDecoder, Decode_optionalResourceField, Decode_outputArrayDecoder, Decode_outputArrayDecoderWithWarnings, Decode_outputBindingDecoder, Decode_outputBindingGlobDecoder, Decode_outputSourceDecoder, Decode_outputStepsDecoder, Decode_outputsDecoder, Decode_outputsDecoderWithWarnings, Decode_overflowDecoder, Decode_overflowIntoDynamicObj, Decode_parseArrayShorthand, Decode_pickValueFieldDecoder, Decode_readSanitizedYaml, Decode_removeYamlComments, Decode_requirementArrayDecoder, Decode_requirementFromTypeName, Decode_requirementsDecoder, Decode_resourceRequirementDecoder, Decode_scatterFieldDecoder, Decode_scatterMethodFieldDecoder, Decode_schemaDefRequirementDecoder, Decode_schemaDefRequirementTypeDecoder, Decode_softwareRequirementDecoder, Decode_sourceArrayFieldDecoder, Decode_stepArrayDecoder, Decode_stepArrayDecoderWithVersion, Decode_stepsDecoder, Decode_stepsDecoderWithVersion, Decode_stringFieldDecoder, Decode_stringOptionFieldDecoder, Decode_stringOrStringArrayDecoder, Decode_toolTimeLimitRequirementDecoder, Decode_tryDecodeBoolScalar, Decode_tryDecodeFieldsAsArray, Decode_tryDecodeFieldsAsMap, Decode_tryDecodeKnownRequirementFromElement, Decode_tryGetBoolField, Decode_tryGetInt64Field, Decode_tryGetIntArrayField, Decode_tryGetLoadListingField, Decode_tryGetPresentField, Decode_tryGetStringField, Decode_tryGetYamlField, Decode_versionDecoder, Decode_withDefaultCwlVersion, Decode_workReuseRequirementDecoder, Decode_workflowDecoder, Decode_workflowStepRunDecoder, Decode_yamlElementOptionFieldDecoder, ResizeArray_map };
3195
+ export { DecodeParameters_cwlParameterReferenceDecoder, DecodeParameters_cwlparameterReferenceArrayDecoder, DecodeParameters_decodeParameterValue, DecodeParameters_decodeYAMLParameterFile, Decode_DecodeResult$1, Decode_DecodeResult$1_$reflection, Decode_DecodeWarning, Decode_DecodeWarning_$reflection, Decode_addRequirementPayloadOverflow, Decode_addWarning, Decode_baseCommandDecoder, Decode_boolOptionFieldDecoder, Decode_boxOverflowInt64, Decode_classDecoder, Decode_commandLineToolDecoder, Decode_cwlSimpleTypeFromString, Decode_cwlTypeDecoder, Decode_cwlTypeDecoder$0027, Decode_cwlTypeStringMatcher, Decode_decodeCWLProcessingUnit, Decode_decodeCWLProcessingUnitElement, Decode_decodeCWLProcessingUnitElementWithWarnings, Decode_decodeCWLProcessingUnitWithWarnings, Decode_decodeCommandLineTool, Decode_decodeCommandLineToolWithWarnings, Decode_decodeDirectoryInstanceFields, Decode_decodeExpressionTool, Decode_decodeExpressionToolWithWarnings, Decode_decodeFileInstanceFields, Decode_decodeHintElement, Decode_decodeInputSequenceItem, Decode_decodeNamedInput, Decode_decodeNamedOutput, Decode_decodeOperation, Decode_decodeOperationWithWarnings, Decode_decodeOutputSequenceItem, Decode_decodeResourceScalar, Decode_decodeSchemaSaladString, Decode_decodeStepInputFromArrayItem, Decode_decodeStepInputFromValue, Decode_decodeStepInputsFromArray, Decode_decodeStepInputsFromArrayWithWarnings, Decode_decodeStepInputsFromMap, Decode_decodeStepOutputItem, Decode_decodeStringArrayOrScalar, Decode_decodeStringOrExpression, Decode_decodeWorkflow, Decode_decodeWorkflowStepFromArrayItem, Decode_decodeWorkflowStepFromArrayItemWithWarnings, Decode_decodeWorkflowStepFromValueWithId, Decode_decodeWorkflowWithWarnings, Decode_direntDecoder, Decode_docDecoder, Decode_dockerRequirementDecoder, Decode_envVarRequirementDecoder, Decode_expressionStringOptionFieldDecoder, Decode_expressionToolDecoder, Decode_hasField, Decode_hintArrayDecoder, Decode_hintsDecoder, Decode_idDecoder, Decode_initialWorkDirEntryDecoder, Decode_initialWorkDirRequirementDecoder, Decode_inlineJavascriptRequirementDecoder, Decode_inplaceUpdateRequirementDecoder, Decode_inputArrayDecoder, Decode_inputArrayDecoderWithWarnings, Decode_inputArraySchemaDecoder, Decode_inputBindingDecoder, Decode_inputEnumSchemaDecoder, Decode_inputRecordFieldDecoder, Decode_inputRecordSchemaDecoder, Decode_inputStepDecoder, Decode_inputStepDecoderWithWarnings, Decode_inputsDecoder, Decode_inputsDecoderWithWarnings, Decode_intentDecoder, Decode_isIgnorableYamlNoise, Decode_isRecoverableDecodingError, Decode_labelDecoder, Decode_linkMergeFieldDecoder, Decode_loadListingRequirementDecoder, Decode_networkAccessRequirementDecoder, Decode_operationDecoder, Decode_optionalResourceField, Decode_outputArrayDecoder, Decode_outputArrayDecoderWithWarnings, Decode_outputBindingDecoder, Decode_outputBindingGlobDecoder, Decode_outputSourceDecoder, Decode_outputStepsDecoder, Decode_outputsDecoder, Decode_outputsDecoderWithWarnings, Decode_overflowDecoder, Decode_overflowIntoDynamicObj, Decode_parseArrayShorthand, Decode_pickValueFieldDecoder, Decode_readSanitizedYaml, Decode_removeYamlComments, Decode_requirementArrayDecoder, Decode_requirementFromTypeName, Decode_requirementsDecoder, Decode_resourceRequirementDecoder, Decode_scatterFieldDecoder, Decode_scatterMethodFieldDecoder, Decode_schemaDefRequirementDecoder, Decode_schemaDefRequirementTypeDecoder, Decode_softwareRequirementDecoder, Decode_sourceArrayFieldDecoder, Decode_stepArrayDecoder, Decode_stepArrayDecoderWithVersion, Decode_stepsDecoder, Decode_stepsDecoderWithVersion, Decode_stringFieldDecoder, Decode_stringOptionFieldDecoder, Decode_stringOrStringArrayDecoder, Decode_toolTimeLimitRequirementDecoder, Decode_tryDecodeBoolScalar, Decode_tryDecodeFieldsAsArray, Decode_tryDecodeFieldsAsMap, Decode_tryDecodeKnownRequirementFromElement, Decode_tryGetBoolField, Decode_tryGetInt64Field, Decode_tryGetIntArrayField, Decode_tryGetLoadListingField, Decode_tryGetPresentField, Decode_tryGetStringField, Decode_tryGetYamlField, Decode_versionDecoder, Decode_withDefaultCwlVersion, Decode_workReuseRequirementDecoder, Decode_workflowDecoder, Decode_workflowStepRunDecoder, Decode_yamlElementOptionFieldDecoder, ResizeArray_map };