@nfdi4plants/arctrl 3.1.1 → 3.2.0

package/dist/ts/ts/Core/Comment.d.ts

@@ -1,8 +1,8 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { IComparable, IEquatable } from '@fable-org/fable-library-js/Util.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { Record } from '@fable-org/fable-library-js/Types.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { IComparable, IEquatable } from '@fable-org/fable-library-ts/Util.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { Record } from '@fable-org/fable-library-ts/Types.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
 export declare class Comment$ {
     _name: Option<string>;
     _value: Option<string>;

package/dist/ts/ts/Core/Comment.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Comment.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/Comment.ts"],"names":[],"mappings":"AAAA,OAAO,EAA4B,MAAM,EAAU,MAAM,uCAAuC,CAAC;AACjG,OAAO,EAAE,WAAW,EAAE,UAAU,EAAU,MAAM,qCAAqC,CAAC;AAEtF,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAI7D,OAAO,EAAE,MAAM,EAAY,MAAM,sCAAsC,CAAC;AAGxE,OAAO,EAAoD,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEvH,qBAAa,QAAQ;IACjB,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACtB,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACX,IAAI,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM;IAIzC,IAAI,IAAI,IAAI,MAAM,GAAG,SAAS,CAG7B;IACD,IAAI,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,EAG5B;IACD,IAAI,KAAK,IAAI,MAAM,GAAG,SAAS,CAG9B;IACD,IAAI,KAAK,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAG9B;IACD,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,QAAQ;IAGlE,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,GAAG,QAAQ;IAGtD,MAAM,CAAC,QAAQ,CAAC,OAAO,EAAE,QAAQ,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC;IAGpD,IAAI,IAAI,QAAQ;IAMhB,MAAM,CAAC,GAAG,EAAE,GAAG,GAAG,OAAO;IAKzB,WAAW,IAAI,KAAK;IAIpB,QAAQ,IAAI,MAAM;IAQlB,MAAM,CAAC,UAAU,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;CAKzC;AAED,wBAAgB,oBAAoB,IAAI,QAAQ,CAE/C;AAED,wBAAgB,sBAAsB,CAAC,IAAI,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,GAAG,QAAQ,CAE9E;AAED,qBAAa,MAAO,SAAQ,MAAO,YAAW,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,MAAM,CAAC;IACjF,QAAQ,CAAC,IAAI,EAAE,KAAK,CAAC;IACrB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;gBACX,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM;IAKtC,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM;IAG/C,MAAM,CAAC,MAAM,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM;IAGjD,MAAM,CAAC,OAAO,CAAC,MAAM,EAAE,MAAM,GAAG,CAAC,KAAK,EAAE,MAAM,CAAC;IAG/C,IAAI,IAAI,MAAM;CAIjB;AAED,wBAAgB,kBAAkB,IAAI,QAAQ,CAE7C"}
+{"version":3,"file":"Comment.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/Comment.ts"],"names":[],"mappings":"AACA,OAAO,EAAgC,MAAM,EAAU,MAAM,uCAAuC,CAAC;AACrG,OAAO,EAAE,WAAW,EAAE,UAAU,EAAU,MAAM,qCAAqC,CAAC;AAEtF,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAI7D,OAAO,EAAE,MAAM,EAAY,MAAM,sCAAsC,CAAC;AAGxE,OAAO,EAAoD,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEvH,qBAAa,QAAQ;IACjB,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACtB,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACX,IAAI,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM;IAIzC,IAAI,IAAI,IAAI,MAAM,GAAG,SAAS,CAG7B;IACD,IAAI,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,EAG5B;IACD,IAAI,KAAK,IAAI,MAAM,GAAG,SAAS,CAG9B;IACD,IAAI,KAAK,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAG9B;IACD,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,QAAQ;IAGlE,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,GAAG,QAAQ;IAGtD,MAAM,CAAC,QAAQ,CAAC,OAAO,EAAE,QAAQ,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC;IAGpD,IAAI,IAAI,QAAQ;IAMhB,MAAM,CAAC,GAAG,EAAE,GAAG,GAAG,OAAO;IAKzB,WAAW,IAAI,KAAK;IAIpB,QAAQ,IAAI,MAAM;IAgBlB,MAAM,CAAC,UAAU,CAAC,CAAC,EAAE,MAAM,GAAG,QAAQ;CAKzC;AAED,wBAAgB,oBAAoB,IAAI,QAAQ,CAE/C;AAED,wBAAgB,sBAAsB,CAAC,IAAI,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,GAAG,QAAQ,CAE9E;AAED,qBAAa,MAAO,SAAQ,MAAO,YAAW,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,MAAM,CAAC;IACjF,QAAQ,CAAC,IAAI,EAAE,KAAK,CAAC;IACrB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;gBACX,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM;IAKtC,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM;IAG/C,MAAM,CAAC,MAAM,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM;IAGjD,MAAM,CAAC,OAAO,CAAC,MAAM,EAAE,MAAM,GAAG,CAAC,KAAK,EAAE,MAAM,CAAC;IAG/C,IAAI,IAAI,MAAM;CAIjB;AAED,wBAAgB,kBAAkB,IAAI,QAAQ,CAE7C"}

package/dist/ts/ts/Core/Comment.js

@@ -1,13 +1,13 @@
-import { unwrap, defaultArg, map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { unwrap, defaultArg, value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { equals } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
 import { boxHashArray, boxHashOption } from './Helper/HashCodes.js';
-import { StringBuilder_$ctor, StringBuilder__Append_Z721C83C5 } from '../../node_modules/@fable-org/fable-library-js/System.Text.js';
-import { join, toText, printf, replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { map, choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { toString, Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
-import { match, create } from '../../node_modules/@fable-org/fable-library-js/RegExp.js';
+import { StringBuilder_$ctor, StringBuilder__Append_Z721C83C5 } from '../../node_modules/@fable-org/fable-library-ts/System.Text.js';
+import { join, toText, printf, replace } from '../../node_modules/@fable-org/fable-library-ts/String.js';
+import { map, choose, ofArray } from '../../node_modules/@fable-org/fable-library-ts/List.js';
+import { toString, Record } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
+import { match, create } from '../../node_modules/@fable-org/fable-library-ts/RegExp.js';
 import { Pattern_handleGroupPatterns } from './Helper/Regex.js';
-import { class_type, record_type, int32_type, string_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { class_type, record_type, int32_type, string_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
 
 class Comment$ {
   constructor(name, value) {
@@ -46,7 +46,7 @@ class Comment$ {
     return Comment$.make(name, value);
   }
   Equals(obj) {
-    let c;
+    let c = void 0;
     const this$ = this;
     return obj instanceof Comment$ && (c = obj, equals(c.Name, this$.Name) && equals(c.Value, this$.Value));
   }
@@ -58,7 +58,14 @@ class Comment$ {
     const this$ = this;
     const sb = StringBuilder_$ctor();
     StringBuilder__Append_Z721C83C5(sb, "Comment {");
-    StringBuilder__Append_Z721C83C5(sb, join(", ", map((tupledArg_1) => toText(printf('%s = "%s"'))(tupledArg_1[0])(tupledArg_1[1]), choose((tupledArg) => map$1((o) => [tupledArg[0], o], tupledArg[1]), ofArray([["Name", this$.Name], ["Value", this$.Value]])))));
+    StringBuilder__Append_Z721C83C5(sb, join(", ", map((tupledArg_1) => toText(printf('%s = "%s"'))(tupledArg_1[0])(tupledArg_1[1]), choose((tupledArg) => {
+      const option_1 = tupledArg[1];
+      if (option_1 != null) {
+        return [tupledArg[0], value(option_1)];
+      } else {
+        return void 0;
+      }
+    }, ofArray([["Name", this$.Name], ["Value", this$.Value]])))));
     StringBuilder__Append_Z721C83C5(sb, "}");
     return toString(sb);
   }

package/dist/ts/ts/Core/CommentList.d.ts

@@ -1,6 +1,6 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Comment$ } from './Comment.js';
-import { FSharpMap } from '@fable-org/fable-library-js/Map.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Comment$ } from './Comment.ts';
+import { FSharpMap } from '@fable-org/fable-library-ts/Map.ts';
 /**
  * If a comment with the given key exists in the [], return its value, else return None
  */

package/dist/ts/ts/Core/CommentList.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"CommentList.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/CommentList.ts"],"names":[],"mappings":"AACA,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEtE,OAAO,EAAE,QAAQ,EAAE,MAAM,cAAc,CAAC;AACxC,OAAO,EAAE,SAAS,EAAS,MAAM,oCAAoC,CAAC;AAItE;;GAEG;AACH,wBAAgB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CAAC,MAAM,CAAC,CAuBzE;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,OAAO,CAuBtE;AAED;;GAEG;AACH,wBAAgB,IAAI,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CAE9D;AAED;;GAEG;AACH,wBAAgB,KAAK,CAAC,QAAQ,EAAE,QAAQ,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC,CAY7E;AAED;;GAEG;AACH,wBAAgB,IAAI,CAAC,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,QAAQ,EAAE,CAcxE;AAED;;GAEG;AACH,wBAAgB,SAAS,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,QAAQ,EAAE,CAuBvE"}
+{"version":3,"file":"CommentList.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/CommentList.ts"],"names":[],"mappings":"AAEA,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAEtE,OAAO,EAAE,QAAQ,EAAE,MAAM,cAAc,CAAC;AACxC,OAAO,EAAE,SAAS,EAAS,MAAM,oCAAoC,CAAC;AAItE;;GAEG;AACH,wBAAgB,OAAO,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CAAC,MAAM,CAAC,CAuBzE;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,OAAO,CAuBtE;AAED;;GAEG;AACH,wBAAgB,IAAI,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CAE9D;AAED;;GAEG;AACH,wBAAgB,KAAK,CAAC,QAAQ,EAAE,QAAQ,EAAE,GAAG,SAAS,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC,CAY7E;AAED;;GAEG;AACH,wBAAgB,IAAI,CAAC,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,QAAQ,EAAE,CAcxE;AAED;;GAEG;AACH,wBAAgB,SAAS,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,QAAQ,EAAE,CAuBvE"}

package/dist/ts/ts/Core/CommentList.js

@@ -1,13 +1,13 @@
-import { tryPick, exists } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { ofSeq } from '../../node_modules/@fable-org/fable-library-js/Map.js';
+import { tryPick, exists } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
+import { value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { ofSeq } from '../../node_modules/@fable-org/fable-library-ts/Map.js';
 import { ResizeArray_choose, ResizeArray_map, ResizeArray_appendSingleton, ResizeArray_filter } from './Helper/Collections.js';
-import { comparePrimitives, equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { comparePrimitives, equals } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
 
 function tryItem(key, comments) {
   return tryPick((c) => {
     const matchValue = c.Name;
-    let matchResult, n_1;
+    let matchResult = void 0, n_1 = void 0;
     if (matchValue != null) {
       if (value(matchValue) === key) {
         matchResult = 0;
@@ -29,7 +29,7 @@ function tryItem(key, comments) {
 function containsKey(key, comments) {
   return exists((c) => {
     const matchValue = c.Name;
-    let matchResult, n_1;
+    let matchResult = void 0, n_1 = void 0;
     if (matchValue != null) {
       if (value(matchValue) === key) {
         matchResult = 0;
@@ -60,7 +60,7 @@ function toMap(comments) {
       return void 0;
     }
   }, comments), {
-    Compare: comparePrimitives
+    Compare: (x, y) => comparePrimitives(x, y) | 0
   });
 }
 function set$(comment, comments) {
@@ -79,7 +79,7 @@ function set$(comment, comments) {
 function dropByKey(key, comments) {
   return ResizeArray_filter((c) => {
     const matchValue = c.Name;
-    let matchResult, n_1;
+    let matchResult = void 0, n_1 = void 0;
     if (matchValue != null) {
       if (value(matchValue) === key) {
         matchResult = 0;

package/dist/ts/ts/Core/Conversion.d.ts

@@ -1,25 +1,25 @@
-import { Person } from './Person.js';
-import { Comment$ } from './Comment.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { OntologyAnnotation } from './OntologyAnnotation.js';
-import { Value_$union } from './Value.js';
-import { CompositeCell_$union } from './Table/CompositeCell.js';
-import { Component } from './Process/Component.js';
-import { CompositeHeader_$union } from './Table/CompositeHeader.js';
-import { ProtocolParameter } from './Process/ProtocolParameter.js';
-import { ProcessParameterValue } from './Process/ProcessParameterValue.js';
-import { FactorValue } from './Process/FactorValue.js';
-import { Factor } from './Process/Factor.js';
-import { MaterialAttributeValue } from './Process/MaterialAttributeValue.js';
-import { MaterialAttribute } from './Process/MaterialAttribute.js';
-import { ProcessInput_$union } from './Process/ProcessInput.js';
-import { ProcessOutput_$union } from './Process/ProcessOutput.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { ArcTable } from './Table/ArcTable.js';
-import { FSharpList } from '@fable-org/fable-library-js/List.js';
-import { Process } from './Process/Process.js';
-import { Protocol } from './Process/Protocol.js';
-import { ArcTables } from './Table/ArcTables.js';
+import { Person } from './Person.ts';
+import { Comment$ } from './Comment.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { OntologyAnnotation } from './OntologyAnnotation.ts';
+import { ScalarValue_$union } from './ScalarValue.ts';
+import { CompositeCell_$union } from './Table/CompositeCell.ts';
+import { Component } from './Process/Component.ts';
+import { CompositeHeader_$union } from './Table/CompositeHeader.ts';
+import { ProtocolParameter } from './Process/ProtocolParameter.ts';
+import { ProcessParameterValue } from './Process/ProcessParameterValue.ts';
+import { FactorValue } from './Process/FactorValue.ts';
+import { Factor } from './Process/Factor.ts';
+import { MaterialAttributeValue } from './Process/MaterialAttributeValue.ts';
+import { MaterialAttribute } from './Process/MaterialAttribute.ts';
+import { ProcessInput_$union } from './Process/ProcessInput.ts';
+import { ProcessOutput_$union } from './Process/ProcessOutput.ts';
+import { ArcTable } from './Table/ArcTable.ts';
+import { FSharpList } from '@fable-org/fable-library-ts/List.ts';
+import { Process } from './Process/Process.ts';
+import { Protocol } from './Process/Protocol.ts';
+import { ArcTables } from './Table/ArcTables.ts';
 export declare const Person_orcidKey = "ORCID";
 export declare const Person_AssayIdentifierPrefix = "performer (ARC:00000168)";
 export declare const Person_createAssayIdentifierKey: ((arg0: string) => string);
@@ -34,7 +34,7 @@ export declare function Person_setCommentFromORCID(person: Person): Person;
 /**
  * Convert a CompositeCell to a ISA Value and Unit tuple.
  */
-export declare function JsonTypes_valueOfCell(value: CompositeCell_$union): [Option<Value_$union>, Option<OntologyAnnotation>];
+export declare function JsonTypes_valueOfCell(value: CompositeCell_$union): [Option<ScalarValue_$union>, Option<OntologyAnnotation>];
 /**
  * Convert a CompositeHeader and Cell tuple to a ISA Component
  */
@@ -63,7 +63,7 @@ export declare function JsonTypes_composeProcessOutput(header: CompositeHeader_$
 /**
  * Convert an ISA Value and Unit tuple to a CompositeCell
  */
-export declare function JsonTypes_cellOfValue(value: Option<Value_$union>, unit: Option<OntologyAnnotation>): CompositeCell_$union;
+export declare function JsonTypes_cellOfValue(value: Option<ScalarValue_$union>, unit: Option<OntologyAnnotation>): CompositeCell_$union;
 /**
  * Convert an ISA Component to a CompositeHeader and Cell tuple
  */
@@ -176,7 +176,7 @@ export declare function ARCtrl_CompositeHeader__CompositeHeader_TryComponent(thi
 /**
  * This function is used to improve interoperability with ISA-JSON types. It is not recommended for default ARCtrl usage.
  */
-export declare function ARCtrl_CompositeCell__CompositeCell_fromValue_Static_Z6986DF18(value: Value_$union, unit?: OntologyAnnotation): CompositeCell_$union;
+export declare function ARCtrl_CompositeCell__CompositeCell_fromValue_Static_Z2468E39A(value: ScalarValue_$union, unit?: OntologyAnnotation): CompositeCell_$union;
 export declare function CompositeRow_toProtocol(tableName: string, row: Iterable<[CompositeHeader_$union, CompositeCell_$union]>): Protocol;
 /**
  * Create a new table from an ISA protocol.

package/dist/ts/ts/Core/Conversion.d.ts.map

@@ -1 +1 @@
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