@nfdi4plants/arctrl 3.1.1 → 3.2.0

package/dist/ts/ts/CWL/WorkflowDescription.d.ts

@@ -1,11 +1,11 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { WorkflowStep } from './WorkflowSteps.js';
-import { CWLInput } from './Inputs.js';
-import { CWLOutput } from './Outputs.js';
-import { HintEntry_$union, Requirement_$union } from './Requirements.js';
-import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
-import { FSharpSet } from '@fable-org/fable-library-js/Set.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { WorkflowStep } from './WorkflowSteps.ts';
+import { CWLInput } from './Inputs.ts';
+import { CWLOutput } from './Outputs.ts';
+import { HintEntry_$union, Requirement_$union } from './Requirements.ts';
+import { DynamicObj } from '../fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js';
+import { FSharpSet } from '@fable-org/fable-library-ts/Set.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
 export declare class CWLWorkflowDescription extends DynamicObj {
     _id: Option<string>;
     _cwlVersion: string;
@@ -42,12 +42,33 @@ export declare class CWLWorkflowDescription extends DynamicObj {
     get Doc(): string | undefined;
     set Doc(doc: Option<string>);
     static get KnownFieldNames(): FSharpSet<string>;
+    /**
+     * Returns workflow inputs.
+     */
     static getInputs(workflow: CWLWorkflowDescription): CWLInput[];
+    /**
+     * Returns workflow outputs.
+     */
     static getOutputs(workflow: CWLWorkflowDescription): CWLOutput[];
+    /**
+     * Returns workflow requirements or an empty ResizeArray if None.
+     */
     static getRequirementsOrEmpty(workflow: CWLWorkflowDescription): Requirement_$union[];
+    /**
+     * Returns workflow hints or an empty ResizeArray if None.
+     */
     static getHintsOrEmpty(workflow: CWLWorkflowDescription): HintEntry_$union[];
+    /**
+     * Returns workflow intent or an empty ResizeArray if None.
+     */
     static getIntentOrEmpty(workflow: CWLWorkflowDescription): string[];
+    /**
+     * Returns the workflow's hints, creating and assigning a new empty ResizeArray if None.
+     */
     static getOrCreateHints(workflow: CWLWorkflowDescription): HintEntry_$union[];
+    /**
+     * Returns the workflow's intent, creating and assigning a new empty ResizeArray if None.
+     */
     static getOrCreateIntent(workflow: CWLWorkflowDescription): string[];
 }
 export declare function CWLWorkflowDescription_$reflection(): TypeInfo;

package/dist/ts/ts/CWL/WorkflowDescription.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"WorkflowDescription.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/CWL/WorkflowDescription.ts"],"names":[],"mappings":"AACA,OAAO,EAAgC,MAAM,EAAU,MAAM,uCAAuC,CAAC;AACrG,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,QAAQ,EAAE,MAAM,aAAa,CAAC;AACvC,OAAO,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AACzC,OAAO,EAAE,gBAAgB,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AACzE,OAAO,EAA0B,UAAU,EAAE,MAAM,oDAAoD,CAAC;AAExG,OAAO,EAAE,SAAS,EAAE,MAAM,oCAAoC,CAAC;AAC/D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,sBAAuB,SAAQ,UAAU;IAClD,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,YAAY,EAAE,CAAC;IACvB,OAAO,EAAE,QAAQ,EAAE,CAAC;IACpB,QAAQ,EAAE,SAAS,EAAE,CAAC;IACtB,aAAa,EAAE,MAAM,CAAC,kBAAkB,EAAE,CAAC,CAAC;IAC5C,MAAM,EAAE,MAAM,CAAC,gBAAgB,EAAE,CAAC,CAAC;IACnC,OAAO,EAAE,MAAM,CAAC,MAAM,EAAE,CAAC,CAAC;IAC1B,SAAS,EAAE,MAAM,CAAC,UAAU,CAAC,CAAC;IAC9B,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IACvB,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;gBACT,KAAK,EAAE,YAAY,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,EAAE,OAAO,EAAE,SAAS,EAAE,EAAE,UAAU,CAAC,EAAE,MAAM,EAAE,YAAY,CAAC,EAAE,kBAAkB,EAAE,EAAE,KAAK,CAAC,EAAE,gBAAgB,EAAE,EAAE,MAAM,CAAC,EAAE,MAAM,EAAE,EAAE,QAAQ,CAAC,EAAE,UAAU,EAAE,KAAK,CAAC,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,EAAE,EAAE,CAAC,EAAE,MAAM;IActP,IAAI,EAAE,IAAI,MAAM,GAAG,SAAS,CAG3B;IACD,IAAI,EAAE,CAAC,EAAE,EAAE,MAAM,CAAC,MAAM,CAAC,EAGxB;IACD,IAAI,UAAU,IAAI,MAAM,CAGvB;IACD,IAAI,UAAU,CAAC,OAAO,EAAE,MAAM,EAG7B;IACD,IAAI,KAAK,IAAI,YAAY,EAAE,CAG1B;IACD,IAAI,KAAK,CAAC,KAAK,EAAE,YAAY,EAAE,EAG9B;IACD,IAAI,MAAM,IAAI,QAAQ,EAAE,CAGvB;IACD,IAAI,MAAM,CAAC,MAAM,EAAE,QAAQ,EAAE,EAG5B;IACD,IAAI,OAAO,IAAI,SAAS,EAAE,CAGzB;IACD,IAAI,OAAO,CAAC,OAAO,EAAE,SAAS,EAAE,EAG/B;IACD,IAAI,YAAY,IAAI,kBAAkB,EAAE,GAAG,SAAS,CAGnD;IACD,IAAI,YAAY,CAAC,YAAY,EAAE,MAAM,CAAC,kBAAkB,EAAE,CAAC,EAG1D;IACD,IAAI,KAAK,IAAI,gBAAgB,EAAE,GAAG,SAAS,CAG1C;IACD,IAAI,KAAK,CAAC,KAAK,EAAE,MAAM,CAAC,gBAAgB,EAAE,CAAC,EAG1C;IACD,IAAI,MAAM,IAAI,MAAM,EAAE,GAAG,SAAS,CAGjC;IACD,IAAI,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,CAAC,EAGlC;IACD,IAAI,QAAQ,IAAI,UAAU,GAAG,SAAS,CAGrC;IACD,IAAI,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC,UAAU,CAAC,EAGxC;IACD,IAAI,KAAK,IAAI,MAAM,GAAG,SAAS,CAG9B;IACD,IAAI,KAAK,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAG9B;IACD,IAAI,GAAG,IAAI,MAAM,GAAG,SAAS,CAG5B;IACD,IAAI,GAAG,CAAC,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAG1B;IACD,MAAM,KAAK,eAAe,IAAI,SAAS,CAAC,MAAM,CAAC,CAE9C;IACD;;OAEG;IACH,MAAM,CAAC,SAAS,CAAC,QAAQ,EAAE,sBAAsB,GAAG,QAAQ,EAAE;IAG9D;;OAEG;IACH,MAAM,CAAC,UAAU,CAAC,QAAQ,EAAE,sBAAsB,GAAG,SAAS,EAAE;IAGhE;;OAEG;IACH,MAAM,CAAC,sBAAsB,CAAC,QAAQ,EAAE,sBAAsB,GAAG,kBAAkB,EAAE;IAGrF;;OAEG;IACH,MAAM,CAAC,eAAe,CAAC,QAAQ,EAAE,sBAAsB,GAAG,gBAAgB,EAAE;IAG5E;;OAEG;IACH,MAAM,CAAC,gBAAgB,CAAC,QAAQ,EAAE,sBAAsB,GAAG,MAAM,EAAE;IAGnE;;OAEG;IACH,MAAM,CAAC,gBAAgB,CAAC,QAAQ,EAAE,sBAAsB,GAAG,gBAAgB,EAAE;IAW7E;;OAEG;IACH,MAAM,CAAC,iBAAiB,CAAC,QAAQ,EAAE,sBAAsB,GAAG,MAAM,EAAE;CAWvE;AAED,wBAAgB,kCAAkC,IAAI,QAAQ,CAE7D;AAED,wBAAgB,qCAAqC,CAAC,KAAK,EAAE,YAAY,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,EAAE,OAAO,EAAE,SAAS,EAAE,EAAE,UAAU,CAAC,EAAE,MAAM,EAAE,YAAY,CAAC,EAAE,kBAAkB,EAAE,EAAE,KAAK,CAAC,EAAE,gBAAgB,EAAE,EAAE,MAAM,CAAC,EAAE,MAAM,EAAE,EAAE,QAAQ,CAAC,EAAE,UAAU,EAAE,KAAK,CAAC,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,EAAE,EAAE,CAAC,EAAE,MAAM,GAAG,sBAAsB,CAExT"}

package/dist/ts/ts/CWL/WorkflowDescription.js

@@ -1,8 +1,7 @@
-import { defaultArg, unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { DynamicObj, DynamicObj_$reflection } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
-import { ofSeq } from '../../node_modules/@fable-org/fable-library-js/Set.js';
-import { comparePrimitives } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { defaultArg, unwrap, value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { DynamicObj, DynamicObj_$reflection } from '../fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js';
+import { workflowDescription } from './CWLKnownFieldNames.js';
+import { class_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
 
 class CWLWorkflowDescription extends DynamicObj {
   constructor(steps, inputs, outputs, cwlVersion, requirements, hints, intent, metadata, label, doc, id) {
@@ -108,25 +107,41 @@ class CWLWorkflowDescription extends DynamicObj {
     this$._doc = doc;
   }
   static get KnownFieldNames() {
-    return ofSeq(["inputs", "outputs", "label", "doc", "intent", "class", "steps", "id", "requirements", "hints", "cwlVersion"], {
-      Compare: comparePrimitives
-    });
+    return workflowDescription;
   }
+  /**
+   * Returns workflow inputs.
+   */
   static getInputs(workflow) {
     return workflow.Inputs;
   }
+  /**
+   * Returns workflow outputs.
+   */
   static getOutputs(workflow) {
     return workflow.Outputs;
   }
+  /**
+   * Returns workflow requirements or an empty ResizeArray if None.
+   */
   static getRequirementsOrEmpty(workflow) {
     return defaultArg(workflow.Requirements, []);
   }
+  /**
+   * Returns workflow hints or an empty ResizeArray if None.
+   */
   static getHintsOrEmpty(workflow) {
     return defaultArg(workflow.Hints, []);
   }
+  /**
+   * Returns workflow intent or an empty ResizeArray if None.
+   */
   static getIntentOrEmpty(workflow) {
     return defaultArg(workflow.Intent, []);
   }
+  /**
+   * Returns the workflow's hints, creating and assigning a new empty ResizeArray if None.
+   */
   static getOrCreateHints(workflow) {
     const matchValue = workflow.Hints;
     if (matchValue == null) {
@@ -137,6 +152,9 @@ class CWLWorkflowDescription extends DynamicObj {
       return value(matchValue);
     }
   }
+  /**
+   * Returns the workflow's intent, creating and assigning a new empty ResizeArray if None.
+   */
   static getOrCreateIntent(workflow) {
     const matchValue = workflow.Intent;
     if (matchValue == null) {

package/dist/ts/ts/CWL/WorkflowSteps.d.ts

@@ -1,23 +1,25 @@
-import { Option } from '@fable-org/fable-library-js/Option.js';
-import { Union } from '@fable-org/fable-library-js/Types.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.11/YAMLiciousTypes.fs.js';
-import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { FSharpSet } from '@fable-org/fable-library-js/Set.js';
-import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
-import { HintEntry_$union, Requirement_$union } from './Requirements.js';
+import { int32 } from '@fable-org/fable-library-ts/Int32.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
+import { Union } from '@fable-org/fable-library-ts/Types.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0/YAMLiciousTypes.fs.js';
+import { FSharpSet } from '@fable-org/fable-library-ts/Set.ts';
+import { DynamicObj } from '../fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js';
+import { HintEntry_$union, Requirement_$union } from './Requirements.ts';
 export type LinkMergeMethod_$union = LinkMergeMethod<0> | LinkMergeMethod<1>;
 export type LinkMergeMethod_$cases = {
     0: ["MergeNested", []];
     1: ["MergeFlattened", []];
 };
-export declare function LinkMergeMethod_MergeNested(): LinkMergeMethod<0>;
-export declare function LinkMergeMethod_MergeFlattened(): LinkMergeMethod<1>;
+export declare function LinkMergeMethod_MergeNested(): any;
+export declare function LinkMergeMethod_MergeFlattened(): any;
 export declare class LinkMergeMethod<Tag extends keyof LinkMergeMethod_$cases> extends Union<Tag, LinkMergeMethod_$cases[Tag][0]> {
+    constructor(tag: Tag, fields: LinkMergeMethod_$cases[Tag][1]);
     readonly tag: Tag;
     readonly fields: LinkMergeMethod_$cases[Tag][1];
-    constructor(tag: Tag, fields: LinkMergeMethod_$cases[Tag][1]);
     cases(): string[];
+    static readonly MergeNested: any;
+    static readonly MergeFlattened: any;
     get AsCwlString(): string;
     static tryParse(value: string): Option<LinkMergeMethod_$union>;
 }
@@ -28,14 +30,17 @@ export type PickValueMethod_$cases = {
     1: ["TheOnlyNonNull", []];
     2: ["AllNonNull", []];
 };
-export declare function PickValueMethod_FirstNonNull(): PickValueMethod<0>;
-export declare function PickValueMethod_TheOnlyNonNull(): PickValueMethod<1>;
-export declare function PickValueMethod_AllNonNull(): PickValueMethod<2>;
+export declare function PickValueMethod_FirstNonNull(): any;
+export declare function PickValueMethod_TheOnlyNonNull(): any;
+export declare function PickValueMethod_AllNonNull(): any;
 export declare class PickValueMethod<Tag extends keyof PickValueMethod_$cases> extends Union<Tag, PickValueMethod_$cases[Tag][0]> {
+    constructor(tag: Tag, fields: PickValueMethod_$cases[Tag][1]);
     readonly tag: Tag;
     readonly fields: PickValueMethod_$cases[Tag][1];
-    constructor(tag: Tag, fields: PickValueMethod_$cases[Tag][1]);
     cases(): string[];
+    static readonly FirstNonNull: any;
+    static readonly TheOnlyNonNull: any;
+    static readonly AllNonNull: any;
     get AsCwlString(): string;
     static tryParse(value: string): Option<PickValueMethod_$union>;
 }
@@ -46,14 +51,17 @@ export type ScatterMethod_$cases = {
     1: ["NestedCrossProduct", []];
     2: ["FlatCrossProduct", []];
 };
-export declare function ScatterMethod_DotProduct(): ScatterMethod<0>;
-export declare function ScatterMethod_NestedCrossProduct(): ScatterMethod<1>;
-export declare function ScatterMethod_FlatCrossProduct(): ScatterMethod<2>;
+export declare function ScatterMethod_DotProduct(): any;
+export declare function ScatterMethod_NestedCrossProduct(): any;
+export declare function ScatterMethod_FlatCrossProduct(): any;
 export declare class ScatterMethod<Tag extends keyof ScatterMethod_$cases> extends Union<Tag, ScatterMethod_$cases[Tag][0]> {
+    constructor(tag: Tag, fields: ScatterMethod_$cases[Tag][1]);
     readonly tag: Tag;
     readonly fields: ScatterMethod_$cases[Tag][1];
-    constructor(tag: Tag, fields: ScatterMethod_$cases[Tag][1]);
     cases(): string[];
+    static readonly DotProduct: any;
+    static readonly NestedCrossProduct: any;
+    static readonly FlatCrossProduct: any;
     get AsCwlString(): string;
     static tryParse(value: string): Option<ScatterMethod_$union>;
 }
@@ -94,6 +102,9 @@ export declare class StepInput extends DynamicObj {
     GetHashCode(): int32;
     static create(id: string, source?: string[], defaultValue?: YAMLElement_$union, valueFrom?: string, linkMerge?: LinkMergeMethod_$union, pickValue?: PickValueMethod_$union, doc?: string, loadContents?: boolean, loadListing?: string, label?: string): StepInput;
     static get KnownFieldNames(): FSharpSet<string>;
+    /**
+     * Updates a StepInput at the given index.
+     */
     static updateAt(index: int32, f: ((arg0: StepInput) => StepInput), inputs: StepInput[]): void;
 }
 export declare function StepInput_$reflection(): TypeInfo;
@@ -118,9 +129,9 @@ export type StepOutput_$cases = {
 export declare function StepOutput_StepOutputString(Item: string): StepOutput<0>;
 export declare function StepOutput_StepOutputRecord(Item: StepOutputParameter): StepOutput<1>;
 export declare class StepOutput<Tag extends keyof StepOutput_$cases> extends Union<Tag, StepOutput_$cases[Tag][0]> {
+    constructor(tag: Tag, fields: StepOutput_$cases[Tag][1]);
     readonly tag: Tag;
     readonly fields: StepOutput_$cases[Tag][1];
-    constructor(tag: Tag, fields: StepOutput_$cases[Tag][1]);
     cases(): string[];
 }
 export declare function StepOutput_$reflection(): TypeInfo;
@@ -138,9 +149,9 @@ export declare function WorkflowStepRun_RunWorkflow(Item: any): WorkflowStepRun<
 export declare function WorkflowStepRun_RunExpressionTool(Item: any): WorkflowStepRun<3>;
 export declare function WorkflowStepRun_RunOperation(Item: any): WorkflowStepRun<4>;
 export declare class WorkflowStepRun<Tag extends keyof WorkflowStepRun_$cases> extends Union<Tag, WorkflowStepRun_$cases[Tag][0]> {
+    constructor(tag: Tag, fields: WorkflowStepRun_$cases[Tag][1]);
     readonly tag: Tag;
     readonly fields: WorkflowStepRun_$cases[Tag][1];
-    constructor(tag: Tag, fields: WorkflowStepRun_$cases[Tag][1]);
     cases(): string[];
 }
 export declare function WorkflowStepRun_$reflection(): TypeInfo;
@@ -181,9 +192,22 @@ export declare class WorkflowStep extends DynamicObj {
     set Hints(hints: Option<HintEntry_$union[]>);
     static fromRunPath(id: string, in_: StepInput[], out_: StepOutput_$union[], runPath: string, label?: string, doc?: string, scatter?: string[], scatterMethod?: ScatterMethod_$union, when_?: string, requirements?: Requirement_$union[], hints?: HintEntry_$union[]): WorkflowStep;
     static get KnownFieldNames(): FSharpSet<string>;
+    /**
+     * Updates a workflow step input by index.
+     */
     static updateInputAt(index: int32, f: ((arg0: StepInput) => StepInput), step: WorkflowStep): void;
+    /**
+     * Adds a new StepInput to a workflow step.
+     */
     static addInput(input: StepInput, step: WorkflowStep): void;
+    /**
+     * Removes all StepInputs matching the provided id.
+     * Reassigns step.In to a new filtered ResizeArray.
+     */
     static removeInputsById(id: string, step: WorkflowStep): void;
+    /**
+     * Updates the first StepInput matching the provided id.
+     */
     static updateInputById(id: string, f: ((arg0: StepInput) => StepInput), step: WorkflowStep): void;
 }
 export declare function WorkflowStep_$reflection(): TypeInfo;

package/dist/ts/ts/CWL/WorkflowSteps.d.ts.map

@@ -1 +1 @@
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package/dist/ts/ts/CWL/WorkflowSteps.js

@@ -1,18 +1,18 @@
-import { unwrap, toArray } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { Union } from '../../node_modules/@fable-org/fable-library-js/Types.js';
-import { union_type, class_type, string_type, obj_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
-import { equals, arrayHash, comparePrimitives } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { unwrap, value } from '../../node_modules/@fable-org/fable-library-ts/Option.js';
+import { Union } from '../../node_modules/@fable-org/fable-library-ts/Types.js';
+import { union_type, class_type, string_type, obj_type } from '../../node_modules/@fable-org/fable-library-ts/Reflection.js';
+import { equals, arrayHash, Exception } from '../../node_modules/@fable-org/fable-library-ts/Util.js';
 import { dynamicPropertiesEqual, hashDynamicProperties } from './DynamicObjHelpers.js';
-import { ofSeq } from '../../node_modules/@fable-org/fable-library-js/Set.js';
-import { setItem } from '../../node_modules/@fable-org/fable-library-js/Array.js';
-import { DynamicObj, DynamicObj_$reflection } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
-import { filter, iterate, tryFindIndex } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { stepInput, stepOutputParameter, workflowStep } from './CWLKnownFieldNames.js';
+import { setItem, item } from '../../node_modules/@fable-org/fable-library-ts/Array.js';
+import { DynamicObj, DynamicObj_$reflection } from '../fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js';
+import { filter, tryFindIndex } from '../../node_modules/@fable-org/fable-library-ts/Seq.js';
 
 function LinkMergeMethod_MergeNested() {
-  return new LinkMergeMethod(0, []);
+  return LinkMergeMethod.MergeNested;
 }
 function LinkMergeMethod_MergeFlattened() {
-  return new LinkMergeMethod(1, []);
+  return LinkMergeMethod.MergeFlattened;
 }
 class LinkMergeMethod extends Union {
   constructor(tag, fields) {
@@ -23,26 +23,32 @@ class LinkMergeMethod extends Union {
   cases() {
     return ["MergeNested", "MergeFlattened"];
   }
+  static {
+    this.MergeNested = new LinkMergeMethod(0, []);
+  }
+  static {
+    this.MergeFlattened = new LinkMergeMethod(1, []);
+  }
   get AsCwlString() {
     const this$ = this;
     return this$.tag === /* MergeFlattened */
     1 ? "merge_flattened" : "merge_nested";
   }
   static tryParse(value) {
-    return value === "merge_nested" ? LinkMergeMethod_MergeNested() : value === "merge_flattened" ? LinkMergeMethod_MergeFlattened() : void 0;
+    return value === "merge_nested" ? LinkMergeMethod.MergeNested : value === "merge_flattened" ? LinkMergeMethod.MergeFlattened : void 0;
   }
 }
 function LinkMergeMethod_$reflection() {
   return union_type("ARCtrl.CWL.LinkMergeMethod", [], LinkMergeMethod, () => [[], []]);
 }
 function PickValueMethod_FirstNonNull() {
-  return new PickValueMethod(0, []);
+  return PickValueMethod.FirstNonNull;
 }
 function PickValueMethod_TheOnlyNonNull() {
-  return new PickValueMethod(1, []);
+  return PickValueMethod.TheOnlyNonNull;
 }
 function PickValueMethod_AllNonNull() {
-  return new PickValueMethod(2, []);
+  return PickValueMethod.AllNonNull;
 }
 class PickValueMethod extends Union {
   constructor(tag, fields) {
@@ -53,6 +59,15 @@ class PickValueMethod extends Union {
   cases() {
     return ["FirstNonNull", "TheOnlyNonNull", "AllNonNull"];
   }
+  static {
+    this.FirstNonNull = new PickValueMethod(0, []);
+  }
+  static {
+    this.TheOnlyNonNull = new PickValueMethod(1, []);
+  }
+  static {
+    this.AllNonNull = new PickValueMethod(2, []);
+  }
   get AsCwlString() {
     const this$ = this;
     return this$.tag === /* TheOnlyNonNull */
@@ -60,20 +75,20 @@ class PickValueMethod extends Union {
     2 ? "all_non_null" : "first_non_null";
   }
   static tryParse(value) {
-    return value === "first_non_null" ? PickValueMethod_FirstNonNull() : value === "the_only_non_null" ? PickValueMethod_TheOnlyNonNull() : value === "all_non_null" ? PickValueMethod_AllNonNull() : void 0;
+    return value === "first_non_null" ? PickValueMethod.FirstNonNull : value === "the_only_non_null" ? PickValueMethod.TheOnlyNonNull : value === "all_non_null" ? PickValueMethod.AllNonNull : void 0;
   }
 }
 function PickValueMethod_$reflection() {
   return union_type("ARCtrl.CWL.PickValueMethod", [], PickValueMethod, () => [[], [], []]);
 }
 function ScatterMethod_DotProduct() {
-  return new ScatterMethod(0, []);
+  return ScatterMethod.DotProduct;
 }
 function ScatterMethod_NestedCrossProduct() {
-  return new ScatterMethod(1, []);
+  return ScatterMethod.NestedCrossProduct;
 }
 function ScatterMethod_FlatCrossProduct() {
-  return new ScatterMethod(2, []);
+  return ScatterMethod.FlatCrossProduct;
 }
 class ScatterMethod extends Union {
   constructor(tag, fields) {
@@ -84,6 +99,15 @@ class ScatterMethod extends Union {
   cases() {
     return ["DotProduct", "NestedCrossProduct", "FlatCrossProduct"];
   }
+  static {
+    this.DotProduct = new ScatterMethod(0, []);
+  }
+  static {
+    this.NestedCrossProduct = new ScatterMethod(1, []);
+  }
+  static {
+    this.FlatCrossProduct = new ScatterMethod(2, []);
+  }
   get AsCwlString() {
     const this$ = this;
     return this$.tag === /* NestedCrossProduct */
@@ -91,7 +115,7 @@ class ScatterMethod extends Union {
     2 ? "flat_crossproduct" : "dotproduct";
   }
   static tryParse(value) {
-    return value === "dotproduct" ? ScatterMethod_DotProduct() : value === "nested_crossproduct" ? ScatterMethod_NestedCrossProduct() : value === "flat_crossproduct" ? ScatterMethod_FlatCrossProduct() : void 0;
+    return value === "dotproduct" ? ScatterMethod.DotProduct : value === "nested_crossproduct" ? ScatterMethod.NestedCrossProduct : value === "flat_crossproduct" ? ScatterMethod.FlatCrossProduct : void 0;
   }
 }
 function ScatterMethod_$reflection() {
@@ -192,7 +216,7 @@ class StepInput extends DynamicObj {
     this$._label = value;
   }
   Equals(o) {
-    let other;
+    let other = void 0;
     const this$ = this;
     return o instanceof StepInput && (other = o, this$.Id === other.Id && equals(this$.Source, other.Source) && equals(this$.DefaultValue, other.DefaultValue) && equals(this$.ValueFrom, other.ValueFrom) && equals(this$.LinkMerge, other.LinkMerge) && equals(this$.PickValue, other.PickValue) && equals(this$.Doc, other.Doc) && equals(this$.LoadContents, other.LoadContents) && equals(this$.LoadListing, other.LoadListing) && equals(this$.Label, other.Label) && dynamicPropertiesEqual(this$, other));
   }
@@ -204,15 +228,16 @@ class StepInput extends DynamicObj {
     return new StepInput(id, unwrap(source), unwrap(defaultValue), unwrap(valueFrom), unwrap(linkMerge), unwrap(pickValue), unwrap(doc), unwrap(loadContents), unwrap(loadListing), unwrap(label));
   }
   static get KnownFieldNames() {
-    return ofSeq(["id", "source", "default", "valueFrom", "linkMerge", "pickValue", "doc", "loadContents", "loadListing", "label"], {
-      Compare: comparePrimitives
-    });
+    return stepInput;
   }
+  /**
+   * Updates a StepInput at the given index.
+   */
   static updateAt(index, f, inputs) {
     if (index < 0 ? true : index >= inputs.length) {
-      throw new Error(`StepInput index ${index} is out of range.\\nParameter name: index`);
+      throw new Exception(`StepInput index ${index} is out of range. (Parameter 'index')`);
     }
-    setItem(inputs, index, f(inputs[index]));
+    setItem(inputs, index, f(item(index, inputs)));
   }
 }
 function StepInput_$reflection() {
@@ -235,7 +260,7 @@ class StepOutputParameter extends DynamicObj {
     this$._id = value;
   }
   Equals(o) {
-    let other;
+    let other = void 0;
     const this$ = this;
     return o instanceof StepOutputParameter && (other = o, this$.Id === other.Id && dynamicPropertiesEqual(this$, other));
   }
@@ -247,9 +272,7 @@ class StepOutputParameter extends DynamicObj {
     return new StepOutputParameter(id);
   }
   static get KnownFieldNames() {
-    return ofSeq(["id"], {
-      Compare: comparePrimitives
-    });
+    return stepOutputParameter;
   }
 }
 function StepOutputParameter_$reflection() {
@@ -412,28 +435,41 @@ class WorkflowStep extends DynamicObj {
     return new WorkflowStep(id, in_, out_, WorkflowStepRun_RunString(runPath), unwrap(label), unwrap(doc), unwrap(scatter), unwrap(scatterMethod), unwrap(when_), unwrap(requirements), unwrap(hints));
   }
   static get KnownFieldNames() {
-    return ofSeq(["id", "run", "in", "out", "requirements", "hints", "label", "doc", "scatter", "scatterMethod", "when"], {
-      Compare: comparePrimitives
-    });
+    return workflowStep;
   }
+  /**
+   * Updates a workflow step input by index.
+   */
   static updateInputAt(index, f, step) {
     const inputs = step.In;
     StepInput.updateAt(index, f, inputs);
   }
+  /**
+   * Adds a new StepInput to a workflow step.
+   */
   static addInput(input, step) {
     void step.In.push(input);
   }
+  /**
+   * Removes all StepInputs matching the provided id.
+   * Reassigns step.In to a new filtered ResizeArray.
+   */
   static removeInputsById(id, step) {
     let remaining;
     const collection = filter((i) => i.Id !== id, step.In);
     remaining = Array.from(collection);
     step.In = remaining;
   }
+  /**
+   * Updates the first StepInput matching the provided id.
+   */
   static updateInputById(id, f, step) {
-    iterate((i_1) => {
+    const option_1 = tryFindIndex((i) => i.Id === id, step.In);
+    if (option_1 != null) {
+      const i_1 = value(option_1) | 0;
       const inputs = step.In;
       StepInput.updateAt(i_1, f, inputs);
-    }, toArray(tryFindIndex((i) => i.Id === id, step.In)));
+    }
   }
 }
 function WorkflowStep_$reflection() {

package/dist/ts/ts/CWLRunResolver.d.ts

@@ -1,12 +1,12 @@
-import { Record } from '@fable-org/fable-library-js/Types.js';
-import { FSharpMap } from '@fable-org/fable-library-js/Map.js';
-import { CWLProcessingUnit_$union } from './CWL/CWLProcessingUnit.js';
-import { IEquatable } from '@fable-org/fable-library-js/Util.js';
-import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-import { WorkflowStepRun_$union } from './CWL/WorkflowSteps.js';
-import { FSharpSet } from '@fable-org/fable-library-js/Set.js';
-import { CWLWorkflowDescription } from './CWL/WorkflowDescription.js';
-import { Option } from '@fable-org/fable-library-js/Option.js';
+import { Record } from '@fable-org/fable-library-ts/Types.ts';
+import { FSharpMap } from '@fable-org/fable-library-ts/Map.ts';
+import { CWLProcessingUnit_$union } from './CWL/CWLProcessingUnit.ts';
+import { MutableArray, IEquatable } from '@fable-org/fable-library-ts/Util.ts';
+import { TypeInfo } from '@fable-org/fable-library-ts/Reflection.ts';
+import { CWLWorkflowDescription } from './CWL/WorkflowDescription.ts';
+import { WorkflowStepRun_$union } from './CWL/WorkflowSteps.ts';
+import { FSharpSet } from '@fable-org/fable-library-ts/Set.ts';
+import { Option } from '@fable-org/fable-library-ts/Option.ts';
 /**
  * Normalizes a file path for use as a lookup key.
  */
@@ -19,8 +19,8 @@ export declare function RunResolutionState_$reflection(): TypeInfo;
 /**
  * Generates candidate lookup paths for a .cwl run reference relative to a workflow file.
  */
-export declare function getRunNodeCandidates(workflowFilePath: string, runPath: string): string[];
-export declare function cacheResolvedProcessingUnit(state: RunResolutionState, candidateKeys: string[], processingUnit: CWLProcessingUnit_$union): void;
+export declare function getRunNodeCandidates(workflowFilePath: string, runPath: string): MutableArray<string>;
+export declare function cacheResolvedProcessingUnit(state: RunResolutionState, candidateKeys: MutableArray<string>, processingUnit: CWLProcessingUnit_$union): void;
 export declare function runFromProcessingUnit(processingUnit: CWLProcessingUnit_$union): WorkflowStepRun_$union;
 /**
  * Iterates all steps in a workflow and resolves each step's run field recursively.

package/dist/ts/ts/CWLRunResolver.d.ts.map

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