xml_jats_resolver 0.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1312) hide show
  1. checksums.yaml +7 -0
  2. data/.travis.yml +6 -0
  3. data/CHANGELOG.md +3 -0
  4. data/Gemfile +8 -0
  5. data/LICENSE.md +25 -0
  6. data/README.md +3 -0
  7. data/Rakefile +10 -0
  8. data/lib/dtd/archiving_dtd/1.0/dtd/XHTMLtablesetup.ent +247 -0
  9. data/lib/dtd/archiving_dtd/1.0/dtd/archivearticle.dtd +815 -0
  10. data/lib/dtd/archiving_dtd/1.0/dtd/archivecustomize.ent +583 -0
  11. data/lib/dtd/archiving_dtd/1.0/dtd/articlemeta.ent +1431 -0
  12. data/lib/dtd/archiving_dtd/1.0/dtd/backmatter.ent +216 -0
  13. data/lib/dtd/archiving_dtd/1.0/dtd/catalog.ent +76 -0
  14. data/lib/dtd/archiving_dtd/1.0/dtd/chars.ent +333 -0
  15. data/lib/dtd/archiving_dtd/1.0/dtd/checksum.md5 +83 -0
  16. data/lib/dtd/archiving_dtd/1.0/dtd/common.ent +1609 -0
  17. data/lib/dtd/archiving_dtd/1.0/dtd/display.ent +988 -0
  18. data/lib/dtd/archiving_dtd/1.0/dtd/format.ent +403 -0
  19. data/lib/dtd/archiving_dtd/1.0/dtd/htmltable.dtd +334 -0
  20. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsa.ent +173 -0
  21. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsb.ent +146 -0
  22. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsc.ent +49 -0
  23. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsn.ent +117 -0
  24. data/lib/dtd/archiving_dtd/1.0/dtd/isoamso.ent +77 -0
  25. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsr.ent +205 -0
  26. data/lib/dtd/archiving_dtd/1.0/dtd/isobox.ent +67 -0
  27. data/lib/dtd/archiving_dtd/1.0/dtd/isocyr1.ent +94 -0
  28. data/lib/dtd/archiving_dtd/1.0/dtd/isocyr2.ent +53 -0
  29. data/lib/dtd/archiving_dtd/1.0/dtd/isodia.ent +41 -0
  30. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk1.ent +1 -1
  31. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk2.ent +1 -1
  32. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk3.ent +70 -0
  33. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk4.ent +1 -1
  34. data/lib/dtd/archiving_dtd/1.0/dtd/isolat1.ent +89 -0
  35. data/lib/dtd/archiving_dtd/1.0/dtd/isolat2.ent +148 -0
  36. data/lib/dtd/archiving_dtd/1.0/dtd/isomfrk.ent +79 -0
  37. data/lib/dtd/archiving_dtd/1.0/dtd/isomopf.ent +53 -0
  38. data/lib/dtd/archiving_dtd/1.0/dtd/isomscr.ent +79 -0
  39. data/lib/dtd/archiving_dtd/1.0/dtd/isonum.ent +103 -0
  40. data/lib/dtd/archiving_dtd/1.0/dtd/isopub.ent +110 -0
  41. data/lib/dtd/archiving_dtd/1.0/dtd/isotech.ent +183 -0
  42. data/lib/dtd/archiving_dtd/1.0/dtd/journalmeta.ent +269 -0
  43. data/lib/dtd/archiving_dtd/1.0/dtd/link.ent +417 -0
  44. data/lib/dtd/archiving_dtd/1.0/dtd/list.ent +361 -0
  45. data/lib/dtd/archiving_dtd/1.0/dtd/math.ent +220 -0
  46. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mathml2-qname-1.mod +275 -0
  47. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mmlalias.ent +564 -0
  48. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mmlextra.ent +128 -0
  49. data/lib/dtd/archiving_dtd/1.0/dtd/mathml2-qname-1.mod +275 -0
  50. data/lib/dtd/archiving_dtd/1.0/dtd/mathml2.dtd +1960 -0
  51. data/lib/dtd/archiving_dtd/1.0/dtd/mathmlsetup.ent +141 -0
  52. data/lib/dtd/archiving_dtd/1.0/dtd/mmlalias.ent +564 -0
  53. data/lib/dtd/archiving_dtd/1.0/dtd/mmlextra.ent +128 -0
  54. data/lib/dtd/archiving_dtd/1.0/dtd/modules.ent +344 -0
  55. data/lib/dtd/archiving_dtd/1.0/dtd/notat.ent +147 -0
  56. data/lib/dtd/archiving_dtd/1.0/dtd/oasis-exchange.ent +354 -0
  57. data/lib/dtd/archiving_dtd/1.0/dtd/oasis-tablesetup.ent +258 -0
  58. data/lib/dtd/archiving_dtd/1.0/dtd/para.ent +320 -0
  59. data/lib/dtd/archiving_dtd/1.0/dtd/phrase.ent +213 -0
  60. data/lib/dtd/archiving_dtd/1.0/dtd/readme.txt +247 -0
  61. data/lib/dtd/archiving_dtd/1.0/dtd/references.ent +559 -0
  62. data/lib/dtd/archiving_dtd/1.0/dtd/sampleminimal.xml +5 -0
  63. data/lib/dtd/archiving_dtd/1.0/dtd/samplesmall.xml +84 -0
  64. data/lib/dtd/archiving_dtd/1.0/dtd/section.ent +205 -0
  65. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsa.ent +173 -0
  66. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsb.ent +146 -0
  67. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsc.ent +49 -0
  68. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsn.ent +117 -0
  69. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamso.ent +77 -0
  70. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsr.ent +205 -0
  71. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isobox.ent +67 -0
  72. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isocyr1.ent +94 -0
  73. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isocyr2.ent +53 -0
  74. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isodia.ent +41 -0
  75. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk1.ent +1 -1
  76. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk2.ent +1 -1
  77. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk3.ent +70 -0
  78. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk4.ent +1 -1
  79. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isolat1.ent +89 -0
  80. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isolat2.ent +148 -0
  81. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomfrk.ent +79 -0
  82. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomopf.ent +53 -0
  83. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomscr.ent +79 -0
  84. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isonum.ent +103 -0
  85. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isopub.ent +110 -0
  86. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isotech.ent +183 -0
  87. data/lib/dtd/archiving_dtd/1.0/dtd/xmlspecchars.ent +274 -0
  88. data/lib/dtd/archiving_dtd/1.1/dtd/XHTMLtablesetup.ent +289 -0
  89. data/lib/dtd/archiving_dtd/1.1/dtd/archivearticle.dtd +819 -0
  90. data/lib/dtd/archiving_dtd/1.1/dtd/archivecustomize.ent +597 -0
  91. data/lib/dtd/archiving_dtd/1.1/dtd/articlemeta.ent +1464 -0
  92. data/lib/dtd/archiving_dtd/1.1/dtd/backmatter.ent +216 -0
  93. data/lib/dtd/archiving_dtd/1.1/dtd/catalog.ent +76 -0
  94. data/lib/dtd/archiving_dtd/1.1/dtd/chars.ent +340 -0
  95. data/lib/dtd/archiving_dtd/1.1/dtd/common.ent +1674 -0
  96. data/lib/dtd/archiving_dtd/1.1/dtd/display.ent +1334 -0
  97. data/lib/dtd/archiving_dtd/1.1/dtd/format.ent +401 -0
  98. data/lib/dtd/archiving_dtd/1.1/dtd/htmltable.dtd +334 -0
  99. data/lib/dtd/archiving_dtd/1.1/dtd/journalmeta.ent +283 -0
  100. data/lib/dtd/archiving_dtd/1.1/dtd/link.ent +475 -0
  101. data/lib/dtd/archiving_dtd/1.1/dtd/list.ent +416 -0
  102. data/lib/dtd/archiving_dtd/1.1/dtd/math.ent +288 -0
  103. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mathml2-qname-1.mod +1 -3
  104. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mmlalias.ent +1 -1
  105. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mmlextra.ent +1 -1
  106. data/lib/dtd/archiving_dtd/1.1/dtd/mathml2.dtd +1960 -0
  107. data/lib/dtd/archiving_dtd/1.1/dtd/mathmlsetup.ent +171 -0
  108. data/lib/dtd/archiving_dtd/1.1/dtd/modules.ent +349 -0
  109. data/lib/dtd/archiving_dtd/1.1/dtd/notat.ent +147 -0
  110. data/lib/dtd/archiving_dtd/1.1/dtd/oasis-exchange.ent +354 -0
  111. data/lib/dtd/archiving_dtd/1.1/dtd/oasis-tablesetup.ent +298 -0
  112. data/lib/dtd/archiving_dtd/1.1/dtd/para.ent +368 -0
  113. data/lib/dtd/archiving_dtd/1.1/dtd/phrase.ent +244 -0
  114. data/lib/dtd/archiving_dtd/1.1/dtd/references.ent +560 -0
  115. data/lib/dtd/archiving_dtd/1.1/dtd/section.ent +202 -0
  116. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsa.ent +1 -1
  117. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsb.ent +1 -1
  118. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsc.ent +1 -1
  119. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsn.ent +1 -1
  120. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamso.ent +1 -1
  121. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsr.ent +1 -1
  122. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isobox.ent +1 -1
  123. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isocyr1.ent +1 -1
  124. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isocyr2.ent +1 -1
  125. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isodia.ent +1 -1
  126. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk1.ent +1 -1
  127. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk2.ent +1 -1
  128. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk3.ent +1 -1
  129. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk4.ent +1 -1
  130. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isolat1.ent +1 -1
  131. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isolat2.ent +1 -1
  132. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomfrk.ent +1 -1
  133. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomopf.ent +1 -1
  134. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomscr.ent +1 -1
  135. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isonum.ent +1 -1
  136. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isopub.ent +1 -1
  137. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isotech.ent +1 -1
  138. data/lib/dtd/archiving_dtd/1.1/dtd/xmlspecchars.ent +274 -0
  139. data/lib/dtd/archiving_dtd/2.0/dtd/Readme.txt +225 -0
  140. data/lib/dtd/archiving_dtd/2.0/dtd/XHTMLtablesetup.ent +309 -0
  141. data/lib/dtd/archiving_dtd/2.0/dtd/archivearticle.dtd +952 -0
  142. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-classes.ent +157 -0
  143. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-mixes.ent +306 -0
  144. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-models.ent +756 -0
  145. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-modules.ent +116 -0
  146. data/lib/dtd/archiving_dtd/2.0/dtd/articlemeta.ent +1811 -0
  147. data/lib/dtd/archiving_dtd/2.0/dtd/backmatter.ent +277 -0
  148. data/lib/dtd/archiving_dtd/2.0/dtd/catalog.ent +115 -0
  149. data/lib/dtd/archiving_dtd/2.0/dtd/chars.ent +359 -0
  150. data/lib/dtd/archiving_dtd/2.0/dtd/common.ent +2790 -0
  151. data/lib/dtd/archiving_dtd/2.0/dtd/default-classes.ent +704 -0
  152. data/lib/dtd/archiving_dtd/2.0/dtd/default-mixes.ent +357 -0
  153. data/lib/dtd/archiving_dtd/2.0/dtd/display.ent +1468 -0
  154. data/lib/dtd/archiving_dtd/2.0/dtd/format.ent +412 -0
  155. data/lib/dtd/archiving_dtd/2.0/dtd/htmltable.dtd +334 -0
  156. data/lib/dtd/archiving_dtd/2.0/dtd/journalmeta.ent +341 -0
  157. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-classes.ent +200 -0
  158. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-mixes.ent +207 -0
  159. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-models.ent +859 -0
  160. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-modules.ent +125 -0
  161. data/lib/dtd/archiving_dtd/2.0/dtd/journalpublishing.dtd +955 -0
  162. data/lib/dtd/archiving_dtd/2.0/dtd/link.ent +510 -0
  163. data/lib/dtd/archiving_dtd/2.0/dtd/list.ent +465 -0
  164. data/lib/dtd/archiving_dtd/2.0/dtd/math.ent +329 -0
  165. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mathml2-qname-1.mod +1 -3
  166. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mmlalias.ent +1 -1
  167. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mmlextra.ent +1 -1
  168. data/lib/dtd/archiving_dtd/2.0/dtd/mathml2.dtd +1960 -0
  169. data/lib/dtd/archiving_dtd/2.0/dtd/mathmlsetup.ent +191 -0
  170. data/lib/dtd/archiving_dtd/2.0/dtd/modules.ent +417 -0
  171. data/lib/dtd/archiving_dtd/2.0/dtd/nlmcitation.ent +124 -0
  172. data/lib/dtd/archiving_dtd/2.0/dtd/notat.ent +172 -0
  173. data/lib/dtd/archiving_dtd/2.0/dtd/oasis-exchange.ent +354 -0
  174. data/lib/dtd/archiving_dtd/2.0/dtd/oasis-tablesetup.ent +308 -0
  175. data/lib/dtd/archiving_dtd/2.0/dtd/para.ent +420 -0
  176. data/lib/dtd/archiving_dtd/2.0/dtd/phrase.ent +278 -0
  177. data/lib/dtd/archiving_dtd/2.0/dtd/references.ent +726 -0
  178. data/lib/dtd/archiving_dtd/2.0/dtd/samplesmall-green.xml +1 -0
  179. data/lib/dtd/archiving_dtd/2.0/dtd/samplesmall-pub.xml +1 -0
  180. data/lib/dtd/archiving_dtd/2.0/dtd/section.ent +220 -0
  181. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsa.ent +1 -1
  182. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsb.ent +1 -1
  183. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsc.ent +1 -1
  184. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsn.ent +1 -1
  185. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamso.ent +1 -1
  186. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsr.ent +1 -1
  187. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isobox.ent +1 -1
  188. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isocyr1.ent +1 -1
  189. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isocyr2.ent +1 -1
  190. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isodia.ent +1 -1
  191. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk1.ent +1 -1
  192. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk2.ent +1 -1
  193. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk3.ent +1 -1
  194. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk4.ent +1 -1
  195. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isolat1.ent +1 -1
  196. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isolat2.ent +1 -1
  197. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomfrk.ent +1 -1
  198. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomopf.ent +1 -1
  199. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomscr.ent +1 -1
  200. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isonum.ent +97 -0
  201. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isopub.ent +1 -1
  202. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isotech.ent +1 -1
  203. data/lib/dtd/archiving_dtd/2.0/dtd/xmlspecchars.ent +290 -0
  204. data/lib/dtd/archiving_dtd/2.1/dtd/ArchiveReadme.txt +283 -0
  205. data/lib/dtd/archiving_dtd/2.1/dtd/XHTMLtablesetup.ent +320 -0
  206. data/lib/dtd/archiving_dtd/2.1/dtd/archivearticle.dtd +981 -0
  207. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-classes.ent +173 -0
  208. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-mixes.ent +317 -0
  209. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-models.ent +777 -0
  210. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-modules.ent +125 -0
  211. data/lib/dtd/archiving_dtd/2.1/dtd/articlemeta.ent +1816 -0
  212. data/lib/dtd/archiving_dtd/2.1/dtd/backmatter.ent +288 -0
  213. data/lib/dtd/archiving_dtd/2.1/dtd/catalog-v2.xml +577 -0
  214. data/lib/dtd/archiving_dtd/2.1/dtd/catalog.ent +179 -0
  215. data/lib/dtd/archiving_dtd/2.1/dtd/chars.ent +359 -0
  216. data/lib/dtd/archiving_dtd/2.1/dtd/common.ent +2991 -0
  217. data/lib/dtd/archiving_dtd/2.1/dtd/default-classes.ent +738 -0
  218. data/lib/dtd/archiving_dtd/2.1/dtd/default-mixes.ent +368 -0
  219. data/lib/dtd/archiving_dtd/2.1/dtd/display.ent +1480 -0
  220. data/lib/dtd/archiving_dtd/2.1/dtd/format.ent +412 -0
  221. data/lib/dtd/archiving_dtd/2.1/dtd/htmltable.dtd +334 -0
  222. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isobox.ent +61 -0
  223. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isocyr1.ent +88 -0
  224. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isocyr2.ent +47 -0
  225. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isodia.ent +35 -0
  226. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isolat1.ent +83 -0
  227. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isolat2.ent +142 -0
  228. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isonum.ent +97 -0
  229. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isopub.ent +105 -0
  230. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsa.ent +167 -0
  231. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsb.ent +143 -0
  232. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsc.ent +43 -0
  233. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsn.ent +114 -0
  234. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamso.ent +73 -0
  235. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsr.ent +204 -0
  236. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isogrk3.ent +64 -0
  237. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomfrk.ent +75 -0
  238. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomopf.ent +49 -0
  239. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomscr.ent +75 -0
  240. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isotech.ent +182 -0
  241. data/lib/dtd/archiving_dtd/2.1/dtd/journalmeta.ent +328 -0
  242. data/lib/dtd/archiving_dtd/2.1/dtd/link.ent +521 -0
  243. data/lib/dtd/archiving_dtd/2.1/dtd/list.ent +496 -0
  244. data/lib/dtd/archiving_dtd/2.1/dtd/math.ent +328 -0
  245. data/lib/dtd/archiving_dtd/2.1/dtd/mathml/mmlalias.ent +564 -0
  246. data/lib/dtd/archiving_dtd/2.1/dtd/mathml/mmlextra.ent +122 -0
  247. data/lib/dtd/archiving_dtd/2.1/dtd/mathml2-qname-1.mod +286 -0
  248. data/lib/dtd/archiving_dtd/2.1/dtd/mathml2.dtd +2206 -0
  249. data/lib/dtd/archiving_dtd/2.1/dtd/mathmlsetup.ent +280 -0
  250. data/lib/dtd/archiving_dtd/2.1/dtd/modules.ent +438 -0
  251. data/lib/dtd/archiving_dtd/2.1/dtd/notat.ent +172 -0
  252. data/lib/dtd/archiving_dtd/2.1/dtd/oasis-exchange.ent +354 -0
  253. data/lib/dtd/archiving_dtd/2.1/dtd/oasis-tablesetup.ent +308 -0
  254. data/lib/dtd/archiving_dtd/2.1/dtd/para.ent +445 -0
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  1181. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-ali-namespace1.ent +154 -0
  1182. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-article1.dtd +894 -0
  1183. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-custom-classes1.ent +326 -0
  1184. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-custom-modules1.ent +269 -0
  1185. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archivecustom-mixes1.ent +420 -0
  1186. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archivecustom-models1.ent +1339 -0
  1187. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-articlemeta1.ent +1817 -0
  1188. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-backmatter1.ent +393 -0
  1189. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-chars1.ent +525 -0
  1190. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-common-atts1.ent +221 -0
  1191. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-common1.ent +4273 -0
  1192. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-default-classes1.ent +1277 -0
  1193. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-default-mixes1.ent +455 -0
  1194. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-display1.ent +1000 -0
  1195. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-format1.ent +858 -0
  1196. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-funding1.ent +547 -0
  1197. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-journalmeta1.ent +454 -0
  1198. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-link1.ent +416 -0
  1199. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-list1.ent +494 -0
  1200. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-math1.ent +402 -0
  1201. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-mathmlsetup1.ent +348 -0
  1202. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-modules1.ent +584 -0
  1203. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-nlmcitation1.ent +285 -0
  1204. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-notat1.ent +269 -0
  1205. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-oasis-namespace1.ent +223 -0
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  1207. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-para1.ent +481 -0
  1208. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-phrase1.ent +502 -0
  1209. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-references1.ent +1205 -0
  1210. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-related-object1.ent +283 -0
  1211. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-section1.ent +324 -0
  1212. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-xmlspecchars1.ent +389 -0
  1213. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/catalog-jats-v1-1-no-base.xml +946 -0
  1214. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/catalog-jats-v1-1-with-base.xml +951 -0
  1215. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isobox.ent +61 -0
  1216. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isocyr1.ent +88 -0
  1217. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isocyr2.ent +47 -0
  1218. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isodia.ent +35 -0
  1219. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isolat1.ent +83 -0
  1220. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isolat2.ent +142 -0
  1221. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isonum.ent +97 -0
  1222. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isopub.ent +105 -0
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  1225. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamsc.ent +43 -0
  1226. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamsn.ent +114 -0
  1227. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamso.ent +73 -0
  1228. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamsr.ent +204 -0
  1229. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isogrk3.ent +64 -0
  1230. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isomfrk.ent +75 -0
  1231. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isomopf.ent +49 -0
  1232. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isomscr.ent +75 -0
  1233. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isotech.ent +182 -0
  1234. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml/mmlalias.ent +564 -0
  1235. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml/mmlextra.ent +122 -0
  1236. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml2-qname-1.mod +286 -0
  1237. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml2.dtd +2206 -0
  1238. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/oasis-exchange.ent +449 -0
  1239. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xhtml-inlstyle-1.mod +34 -0
  1240. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xhtml-table-1.mod +333 -0
  1241. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xmlchars/isogrk1.ent +70 -0
  1242. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xmlchars/isogrk2.ent +41 -0
  1243. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xmlchars/isogrk4.ent +66 -0
  1244. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-XHTMLtablesetup1.ent +501 -0
  1245. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-ali-namespace1.ent +154 -0
  1246. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archive-oasis-article1-mathml3.dtd +911 -0
  1247. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archive-oasis-custom-classes1.ent +326 -0
  1248. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archive-oasis-custom-modules1.ent +269 -0
  1249. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archivecustom-mixes1.ent +420 -0
  1250. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archivecustom-models1.ent +1339 -0
  1251. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-articlemeta1.ent +1817 -0
  1252. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-backmatter1.ent +393 -0
  1253. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-chars1.ent +525 -0
  1254. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-common-atts1.ent +221 -0
  1255. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-common1.ent +4273 -0
  1256. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-default-classes1.ent +1277 -0
  1257. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-default-mixes1.ent +455 -0
  1258. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-display1.ent +1000 -0
  1259. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-format1.ent +858 -0
  1260. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-funding1.ent +547 -0
  1261. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-journalmeta1.ent +454 -0
  1262. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-link1.ent +416 -0
  1263. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-list1.ent +494 -0
  1264. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-math1.ent +402 -0
  1265. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-mathml3-mathmlsetup1.ent +350 -0
  1266. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-mathml3-modules1.ent +190 -0
  1267. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-modules1.ent +584 -0
  1268. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-nlmcitation1.ent +285 -0
  1269. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-notat1.ent +269 -0
  1270. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-oasis-namespace1.ent +223 -0
  1271. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-oasis-tablesetup1.ent +409 -0
  1272. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-para1.ent +481 -0
  1273. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-phrase1.ent +502 -0
  1274. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-references1.ent +1205 -0
  1275. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-related-object1.ent +283 -0
  1276. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-section1.ent +324 -0
  1277. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-xmlspecchars1.ent +389 -0
  1278. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/catalog-jats-v1-1-no-base.xml +946 -0
  1279. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/catalog-jats-v1-1-with-base.xml +951 -0
  1280. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isobox.ent +61 -0
  1281. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isocyr1.ent +88 -0
  1282. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isocyr2.ent +47 -0
  1283. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isodia.ent +35 -0
  1284. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isolat1.ent +83 -0
  1285. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isolat2.ent +142 -0
  1286. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isonum.ent +97 -0
  1287. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isopub.ent +105 -0
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  1294. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso9573-13/isogrk3.ent +64 -0
  1295. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso9573-13/isomfrk.ent +75 -0
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  1297. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso9573-13/isomscr.ent +75 -0
  1298. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso9573-13/isotech.ent +182 -0
  1299. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/mathml/mmlalias.ent +564 -0
  1300. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/mathml/mmlextra.ent +122 -0
  1301. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/mathml3-qname1.mod +294 -0
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  1304. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/xhtml-inlstyle-1.mod +34 -0
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  1308. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/xmlchars/isogrk4.ent +66 -0
  1309. data/lib/errors.rb +21 -0
  1310. data/lib/xml_jats_resolver.rb +64 -0
  1311. data/xml_jats_resolver.gemspec +24 -0
  1312. metadata +1396 -0
data/lib/dtd/archiving_dtd/1.1/dtd/archivearticle.dtd ADDED
@@ -0,0 +1,819 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Journal Archiving and Interchange DTD -->
3
+ <!-- VERSION: 1.1 -->
4
+ <!-- DATE: November 1, 2003 -->
5
+ <!-- -->
6
+ <!-- ============================================================= -->
7
+
8
+ <!-- ============================================================= -->
9
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
10
+ <!-- TYPICAL INVOCATION -->
11
+ <!--
12
+ "-//NLM//DTD Journal Archiving and Interchange DTD v1.1 20031101//EN"
13
+ Delivered as file "archivearticle.dtd" -->
14
+ <!-- ============================================================= -->
15
+
16
+
17
+ <!-- ============================================================= -->
18
+ <!-- SYSTEM: Journal Archiving and Interchange DTD of the -->
19
+ <!-- Archiving and Interchange DTD Suite -->
20
+ <!-- -->
21
+ <!-- PURPOSE: DTD to describe a full-text journal article -->
22
+ <!-- -->
23
+ <!-- The Journal Archiving and Interchange DTD -->
24
+ <!-- describes journal articles and some non-article -->
25
+ <!-- material such as product and book reviews for -->
26
+ <!-- repository or interchange purposes. It describes -->
27
+ <!-- both the metadata for a journal article and the -->
28
+ <!-- full content of the article. -->
29
+ <!-- This DTD was constructed using the modules in the -->
30
+ <!-- Archiving and Interchange DTD Suite, using almost -->
31
+ <!-- no customization. -->
32
+ <!-- -->
33
+ <!-- CONTAINS: 1) Invoke module of modules (%modules.ent;) -->
34
+ <!-- (Archiving and Interchange Suite module that -->
35
+ <!-- names all potential modules) -->
36
+ <!-- 2) Invoke Customization Module -->
37
+ <!-- (%archivecustomize.ent;) -->
38
+ <!-- (DTD-specific module that defines the classes, -->
39
+ <!-- mixes, and other Parameter Entities to be -->
40
+ <!-- used in this DTD) -->
41
+ <!-- 3) Invoke the Common Element Module (from Suite) -->
42
+ <!-- 4) Invoke all the Class Modules (from Suite) -->
43
+ <!-- 5) Parameter Entities for attribute values used -->
44
+ <!-- in this module (DTD-specific definitions) -->
45
+ <!-- 6) Define document element (Article <article>) -->
46
+ <!-- 7) Define Front Matter <front> -->
47
+ <!-- 8) Define Body Matter <body> -->
48
+ <!-- 9) Define Back Matter <back> -->
49
+ <!-- -->
50
+ <!-- CREATED FOR: -->
51
+ <!-- Digital Archive of Journal Articles -->
52
+ <!-- National Center for Biotechnology Information -->
53
+ <!-- (NCBI) -->
54
+ <!-- National Library of Medicine (NLM) -->
55
+ <!-- -->
56
+ <!-- ORIGINAL CREATION DATE: -->
57
+ <!-- December 2002 -->
58
+ <!-- -->
59
+ <!-- CREATED BY: Jeff Beck (NCBI) -->
60
+ <!-- Deborah Lapeyre (Mulberry Technologies, Inc.) -->
61
+ <!-- Bruce Rosenblum (Inera Inc.) -->
62
+ <!-- -->
63
+ <!-- The Journal Archiving and Interchange DTD is -->
64
+ <!-- built from the Archiving and Interchange DTD -->
65
+ <!-- Suite. -->
66
+ <!-- -->
67
+ <!-- The Archiving and Interchange DTD Suite evolved -->
68
+ <!-- from NLM/NCBI's pmc-1 DTD. -->
69
+ <!-- -->
70
+ <!-- NLM thanks the Harvard University Libraries, both -->
71
+ <!-- for proposing that a draft archiving NLM DTD for -->
72
+ <!-- life sciences journals be extended to accommodate -->
73
+ <!-- journals in all disciplines and for sponsoring -->
74
+ <!-- Bruce Rosenblum's collaboration with other DTD -->
75
+ <!-- authors in completing Version 1.0. The Andrew W. -->
76
+ <!-- Mellon Foundation provided support for these -->
77
+ <!-- important contributions. -->
78
+ <!-- contributions. -->
79
+ <!-- -->
80
+ <!-- Suggestions for refinements and enhancements to -->
81
+ <!-- this DTD should be sent in email to: -->
82
+ <!-- archive-dtd@ncbi.nlm.nih.gov -->
83
+ <!-- ============================================================= -->
84
+
85
+
86
+ <!-- ============================================================= -->
87
+ <!-- DTD VERSION\CHANGE HISTORY -->
88
+ <!-- ============================================================= -->
89
+ <!--
90
+
91
+ =============================================================
92
+
93
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
94
+
95
+ =============================================================
96
+ Version 1.1 (TRG) v1.1 (2003-11-01)
97
+
98
+ 2. Changed parameter entity %dtd-version; to reference latest
99
+ version of DTD (version 1.1)
100
+
101
+ 1. Updated public identifiers for modules.ent and
102
+ archivecustomize.ent to reflect modules' modification.
103
+ Rationale: To call updated modules.
104
+ -->
105
+
106
+
107
+ <!-- ============================================================= -->
108
+ <!-- DESIGN CONSIDERATIONS -->
109
+ <!-- ============================================================= -->
110
+
111
+
112
+ <!-- MODULAR DTD LIBRARY
113
+ A set of journal archiving and interchange
114
+ DTD modules was written as the basis for
115
+ publishing, interchange, and repository
116
+ DTDs, with the intention that DTDs for
117
+ specific purposes, such as this Journal
118
+ Archiving and Interchange DTD, would be
119
+ developed based on them.
120
+
121
+ This archiving DTD has been designed to
122
+ to be descriptive, open, and inclusive to
123
+ allow journal articles to be translated into
124
+ this format as conveniently as possible
125
+ from a wide variety of proprietary journal
126
+ article DTDs (such as Blackwell, Keton, and
127
+ Ovid).
128
+
129
+ This Archiving DTD has been developed from
130
+ the Archiving and Interchange DTD Suite
131
+ modules, in the approved manner, making
132
+ changes to the declarations in those modules
133
+ by overriding Parameter Entity contents
134
+ by redefining the entities in the
135
+ %archivecustomize.ent;
136
+ module, which is called from this DTD file.
137
+ No changes to any of the original Archiving
138
+ and Interchange Suite modules are required
139
+ in order to use this DTD. -->
140
+
141
+
142
+ <!-- ============================================================= -->
143
+ <!-- VERSION 1.0 DESIGN CONSIDERATIONS -->
144
+ <!-- ============================================================= -->
145
+
146
+
147
+ <!-- THE MANY ROADS NOT TAKEN
148
+ In the interest of getting a version of this
149
+ DTD into production as quickly as practical,
150
+ several structures and functions that might
151
+ be appropriately included have been delayed
152
+ until a future version of this DTD. Such
153
+ components include:
154
+ - Questions and Answers (These may be
155
+ modeled with the current DTDs by using
156
+ paragraphs and lists)
157
+ - Continuing Medical Education material
158
+ (which frequently contains questions
159
+ and answers)
160
+ - Forms and fill-in-the-blank
161
+ - Conflict of Interest statements and
162
+ Financial Disclosure (May be modeled
163
+ as paragraphs or footnotes)
164
+ - Electronic and Digital Rights Management
165
+ - Advertising included in the journal:
166
+ + Job ads
167
+ + Classified advertising
168
+ + Display advertising
169
+ - Calendars, meeting schedules, and
170
+ announcements. (These can be handled
171
+ as ordinary articles or sections within
172
+ articles)
173
+ - About the Journal material such as Author
174
+ Guidelines, Policy and Scope statements,
175
+ Editorial or advisory boards, detailed
176
+ indicia, etc.
177
+ -->
178
+
179
+
180
+ <!-- ============================================================= -->
181
+ <!-- MODULE OF MODULES INVOKED -->
182
+ <!-- ============================================================= -->
183
+
184
+
185
+ <!-- MODULE TO NAME THE MODULES -->
186
+ <!-- Names all the external modules (except
187
+ itself and the Customization Module) that
188
+ are part of the modular Journal Archiving
189
+ and Interchange DTD Suite library.
190
+ This DTD then selects from those
191
+ modules by referencing the external
192
+ Parameter Entities defined in the Module of
193
+ Modules. To include a set of elements (such
194
+ as all the lists or the MathML elements) this
195
+ DTD references the external Parameter Entity
196
+ of the module that contains the declarations.
197
+ -->
198
+ <!ENTITY % modules.ent SYSTEM "modules.ent" >
199
+ %modules.ent;
200
+
201
+
202
+ <!-- ============================================================= -->
203
+ <!-- CUSTOMIZATION MODULE INVOKED -->
204
+ <!-- ============================================================= -->
205
+
206
+
207
+ <!-- CUSTOMIZATION (DEFINE CLASSES) MODULE -->
208
+ <!-- Set up the Parameter Entities and element
209
+ class definitions that will be used to
210
+ establish the content models and attribute
211
+ lists for the Archiving and Interchange DTD.
212
+ Note: must be called after the Module of
213
+ Modules but before any other module. -->
214
+ <!ENTITY % archivecustomize.ent SYSTEM
215
+ "archivecustomize.ent" >
216
+ %archivecustomize.ent;
217
+
218
+
219
+ <!-- ============================================================= -->
220
+ <!-- COMMON (SHARED) ELEMENTS MODULE INVOKED -->
221
+ <!-- ============================================================= -->
222
+
223
+
224
+ <!-- COMMON (SHARED) DECLARATIONS -->
225
+ <!-- Declarations for elements, attributes,
226
+ entities, and Notations that are shared by
227
+ more than one class module. Note: Must be
228
+ called before any of the class modules. -->
229
+
230
+ %common.ent;
231
+
232
+
233
+ <!-- ============================================================= -->
234
+ <!-- JOURNAL ARTICLE CLASS ELEMENTS (alpha) -->
235
+ <!-- ============================================================= -->
236
+
237
+ <!-- ARTICLE METADATA ELEMENTS -->
238
+ %articlemeta.ent;
239
+
240
+
241
+ <!-- BACK MATTER ELEMENTS -->
242
+ %backmatter.ent;
243
+
244
+
245
+ <!-- DISPLAY (GRAPHICAL) ELEMENTS -->
246
+ %display.ent;
247
+
248
+
249
+ <!-- FORMATTING ELEMENT CLASSES -->
250
+ <!-- Elements that change rendition/display. -->
251
+ %format.ent;
252
+
253
+
254
+ <!-- JOURNAL METADATA ELEMENTS -->
255
+ %journalmeta.ent;
256
+
257
+
258
+ <!-- LINK CLASS ELEMENTS -->
259
+ %link.ent;
260
+
261
+
262
+ <!-- LIST CLASS ELEMENTS -->
263
+ %list.ent;
264
+
265
+
266
+ <!-- MATH ELEMENTS -->
267
+ %math.ent;
268
+
269
+
270
+ <!-- PARAGRAPH-LEVEL ELEMENTS -->
271
+ %para.ent;
272
+
273
+
274
+ <!-- PHRASE-LEVEL ELEMENTS -->
275
+ %phrase.ent;
276
+
277
+
278
+ <!-- BIBLIOGRAPHIC REFERENCE (CITATION)
279
+ CLASS ELEMENTS -->
280
+ %references.ent;
281
+
282
+
283
+ <!-- SECTION ELEMENTS -->
284
+ %section.ent;
285
+
286
+
287
+ <!-- ============================================================= -->
288
+ <!-- THE REST OF THE EXTERNAL MODULES INVOKED -->
289
+ <!-- ============================================================= -->
290
+
291
+
292
+ <!-- MATHML SETUP MODULE -->
293
+ <!-- Invoke the MathML modules -->
294
+ %mathmlsetup.ent;
295
+
296
+
297
+
298
+ <!-- XHTML TABLE SETUP MODULE -->
299
+ <!-- Set up the necessary Parameter Entity values
300
+ and then invoke XHTML (HTML 4.0) table
301
+ module -->
302
+ %XHTMLtablesetup.ent;
303
+
304
+
305
+ <!-- SPECIAL CHARACTERS DECLARATIONS -->
306
+ <!-- Standard XML special character entities
307
+ used in this DTD -->
308
+ %xmlspecchars.ent;
309
+
310
+
311
+ <!-- CUSTOM SPECIAL CHARACTERS DECLARATIONS -->
312
+ <!-- Custom special character entities created
313
+ specifically for use in this DTD Suite -->
314
+ %chars.ent;
315
+
316
+
317
+ <!-- NOTATION DECLARATIONS MODULE -->
318
+ %notat.ent;
319
+
320
+
321
+ <!-- ============================================================= -->
322
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE VALUES -->
323
+ <!-- ============================================================= -->
324
+
325
+
326
+ <!-- ARTICLE TYPES -->
327
+ <!-- What kind of article is this? All articles
328
+ should have types assigned if possible.
329
+ -->
330
+ <!ENTITY % article-types
331
+ "article-commentary | abstract | addendum |
332
+ announcement | book-review |
333
+ books-received | brief-report | calendar |
334
+ case-report | correction | discussion |
335
+ editorial | in-brief | introduction |
336
+ letter | meeting-report | news | obituary |
337
+ oration | other | product-review |
338
+ research-article | retraction | reply |
339
+ review-article" >
340
+
341
+
342
+ <!-- ============================================================= -->
343
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE LISTS -->
344
+ <!-- ============================================================= -->
345
+
346
+
347
+ <!-- DTD VERSION -->
348
+ <!-- What version of this DTD was used to make
349
+ the document instance under consideration.
350
+ Note that this is a fixed value that should
351
+ change every time the DTD changes versions or
352
+ revisions. -->
353
+ <!ENTITY % dtd-version
354
+ "dtd-version
355
+ CDATA #FIXED '1.1'" >
356
+
357
+
358
+
359
+ <!-- ARTICLE ATTRIBUTES -->
360
+ <!-- Attributes for the top-level element
361
+ <article> -->
362
+ <!ENTITY % article-atts
363
+ "article-type
364
+ (%article-types;) #IMPLIED
365
+ %dtd-version;
366
+ xml:lang NMTOKEN 'EN'
367
+ %XLINK.xmlns.attrib;
368
+ %MATHML.xmlns.attrib;" >
369
+
370
+
371
+ <!-- RESPONSE ATTRIBUTES -->
372
+ <!-- Attributes for the <response> element -->
373
+ <!ENTITY % response-atts
374
+ "response-type
375
+ CDATA #IMPLIED
376
+ xml:lang NMTOKEN 'EN'" >
377
+
378
+
379
+ <!-- ============================================================= -->
380
+ <!-- JOURNAL ARTICLE ELEMENTS -->
381
+ <!-- ============================================================= -->
382
+
383
+
384
+ <!-- ARTICLE MODEL (LIMITED) -->
385
+ <!ENTITY % article-short-model
386
+ "front, body?, back?" >
387
+
388
+
389
+ <!-- ARTICLE MODEL WITH SUBARTICLE OR RESPONSE -->
390
+ <!ENTITY % article-full-model
391
+ "front, body?, back?,
392
+ (sub-article* | response*)" >
393
+
394
+
395
+ <!-- ARTICLE -->
396
+ <!-- The complete content of a journal article.
397
+ An article is potentially divided into
398
+ four (more typically three) parts: 1) the
399
+ Front Matter (article metadata or header),
400
+ the body of the article (main content), any
401
+ ancillary information such as a glossary or
402
+ appendix, and (the least common) a
403
+ response, that is a commentary on the
404
+ article itself. -->
405
+ <!ELEMENT article (%article-full-model;) >
406
+
407
+ <!-- article-type
408
+ What kind of article is this?
409
+ Note: When the article is a commentary on
410
+ another article, for example a correction or
411
+ addendum, this attribute is metadata for the
412
+ commentary itself, it does NOT define the
413
+ kind of article that is being corrected or
414
+ amended.
415
+ Authoring Note: All articles
416
+ should have types assigned if possible.
417
+ abstract The article itself is an
418
+ abstract (of a paper or
419
+ presentation), usually that
420
+ has been presented or published
421
+ separately.
422
+ addendum A published item that adds
423
+ additional information or
424
+ clarification to another item
425
+ Similar value "correction"
426
+ corrects an error in previously
427
+ published material
428
+ announcement
429
+ Material announced in the
430
+ publication (may or may not be
431
+ directly related to the pub)
432
+ article-commentary
433
+ An item whose subject or focus
434
+ is another article or articles;
435
+ this article comments on the
436
+ other article(s) (For example,
437
+ for a controversial article, the
438
+ editors of the publication
439
+ might invite an author of the
440
+ opposing opinion to comment on
441
+ the first article, and publish
442
+ the two together.)
443
+ book-review
444
+ Review or analysis of one or more
445
+ printed or online books (Note
446
+ that product reviews are a
447
+ separate type.)
448
+ books-received
449
+ Notification of items such as
450
+ books that have been received
451
+ by the publication for review
452
+ or other consideration
453
+ brief-report
454
+ A short and/or rapid announcement
455
+ of research results
456
+ calendar A list of events
457
+ case-report
458
+ Case study, case report, or other
459
+ description of a case
460
+ correction A modification, or
461
+ correction of previously
462
+ published material (sometimes
463
+ called "errata") Similar value
464
+ "addendum" merely adds to
465
+ previously published material
466
+ discussion Invited discussion related to a
467
+ specific article or issue
468
+ editorial Opinion piece, policy statement,
469
+ or general commentary, typically
470
+ written by staff of the
471
+ publication. Note: similar value
472
+ "article-commentary" is reserved
473
+ for a commentary on a specific
474
+ article or articles.
475
+ in-brief Summary of items in the current
476
+ issue
477
+ introduction
478
+ An introduction to the
479
+ publication, a series of articles
480
+ within the publication, etc.,
481
+ typically for a special section
482
+ or issue
483
+ letter Letter to the publication,
484
+ typically commenting upon a
485
+ published item
486
+ meeting-report
487
+ Report of a conference,
488
+ symposium, or meeting
489
+ news News item
490
+ obituary Announcement of a death or
491
+ appreciation of a colleague
492
+ who has recently died
493
+ oration Reprint of a speech or oral
494
+ presentation
495
+ other Not any of the article types
496
+ explicitly named in this list
497
+ product-review
498
+ Description, analysis, or review
499
+ of a product or service, for
500
+ example a software package (note
501
+ that book review is a separate
502
+ type)
503
+ reply Reply to a letter or commentary,
504
+ typically by the original
505
+ author commenting upon the
506
+ comments
507
+ research-article
508
+ Research article
509
+ retraction Retraction of previously
510
+ published material
511
+ review-article
512
+ Review or state-of-the-art
513
+ summary article
514
+ dtd-version
515
+ Which version of the DTD does this article
516
+ use? The value is a #FIXED attribute, so
517
+ the entire attribute definition is defined
518
+ in a Parameter Entity, so the next version
519
+ of the DTD can use a different #FIXED value.
520
+ xml:lang The language in which the value of the
521
+ element is expressed. Recommended best
522
+ practice is to use values as defined in
523
+ RFC 1766, typically 2-letter language
524
+ codes such as "FR" (French), "EN" (English),
525
+ and "DE" (German). These values are NOT
526
+ case sensitive, so "EN" = "en". The values
527
+ may include hyphenated differentiators such
528
+ as "EN-AU" (Australian English) and "EN-US"
529
+ (United States English).
530
+ Processing and Conversion Note: All other
531
+ xml:lang attributes within the article
532
+ inherit the value set on <article> unless
533
+ explicitly set themselves with their own
534
+ "xml:lang" attribute.
535
+ xmlns Set up the pseudo-attributes for the
536
+ namespaces for any namespaces used in this
537
+ DTD. Xlink and MathML are set up in the
538
+ MathML modules. These xmlns are called
539
+ here because certain older tools will not
540
+ work properly with namespaces unless they
541
+ are declared on the top level element.
542
+ The PEs are defined in the MathML modules. -->
543
+ <!ATTLIST article
544
+ %article-atts; >
545
+
546
+
547
+ <!-- ============================================================= -->
548
+ <!-- FRONT MATTER ELEMENTS -->
549
+ <!-- ============================================================= -->
550
+
551
+
552
+ <!-- FRONT MATTER MODEL -->
553
+ <!ENTITY % front-model "journal-meta?, article-meta,
554
+ (def-list | notes)*" >
555
+
556
+ <!-- FRONT MATTER -->
557
+ <!-- The metadata concerning an article, such as
558
+ the name and issue of the journal in which it
559
+ appears and the name and author(s) of the
560
+ article.
561
+ In some journal DTDs this is called the
562
+ header information, and it includes metadata
563
+ concerning the journal <journal-meta> and
564
+ metadata concerning the issue of the journal
565
+ and the individual article <article-meta>. -->
566
+ <!ELEMENT front (%front-model;) >
567
+
568
+
569
+ <!-- ============================================================= -->
570
+ <!-- BODY ELEMENTS -->
571
+ <!-- ============================================================= -->
572
+
573
+
574
+ <!-- BODY MODEL -->
575
+ <!-- Content model for the Body (main textual
576
+ content) of a journal article. -->
577
+ <!ENTITY % body-model "(%para-level;)*, (%sec-level;)*" >
578
+
579
+
580
+ <!-- BODY OF THE ARTICLE -->
581
+ <!-- The main textual portion of the article that
582
+ conveys the content. -->
583
+ <!ELEMENT body (%body-model;) >
584
+
585
+
586
+ <!-- ============================================================= -->
587
+ <!-- BACK MATTER ELEMENTS -->
588
+ <!-- ============================================================= -->
589
+
590
+
591
+ <!-- BACK MATTER MODEL -->
592
+ <!-- Content model for the Back Matter (ancillary
593
+ material such as appendices) of a journal
594
+ article. -->
595
+ <!ENTITY % back-model "title*, (%doc-back-matter-elements;)*" >
596
+
597
+
598
+ <!-- BACK MATTER -->
599
+ <!-- Ancillary or supporting material not included
600
+ as part of the main textual content of a
601
+ journal article, for example appendices and
602
+ acknowledgments. -->
603
+ <!ELEMENT back (%back-model;) >
604
+
605
+
606
+ <!-- ============================================================= -->
607
+ <!-- SUBARTICLE -->
608
+ <!-- ============================================================= -->
609
+
610
+
611
+ <!-- SUBARTICLE -->
612
+ <!-- An article that is completely contained
613
+ inside another article. Both the article and
614
+ the subarticle have their own metadata. The
615
+ article has at very least journal and issue
616
+ information and start and end pages; it may
617
+ have a title, author, or other metadata.
618
+ The subarticle has its own, independent
619
+ metadata, such as authors, that it
620
+ may not share with the article that
621
+ encloses it.
622
+ Conversion Note: "Superarticles" that contain
623
+ other articles rarely contain much content of
624
+ their own, perhaps just a title and
625
+ introductory paragraph.
626
+ Authoring Note: This construction is NOT to
627
+ be used for an article and its response, or
628
+ for a series of responses, even if the
629
+ original article to which the responses are
630
+ replying is elsewhere. -->
631
+ <!ELEMENT sub-article (%article-full-model;) >
632
+ <!-- article-type
633
+ What kind of article is this?
634
+ Note: When the article is a commentary on
635
+ another article, for example a correction or
636
+ addendum, this attribute is metadata for the
637
+ commentary itself, it does NOT define the
638
+ kind of article that is being corrected or
639
+ amended.
640
+ Authoring Note: All articles
641
+ should have types assigned if possible.
642
+ abstract The article itself is an
643
+ abstract (of a paper or
644
+ presentation), usually that
645
+ has been presented or published
646
+ separately.
647
+ addendum A published item that adds
648
+ additional information or
649
+ clarification to another item
650
+ Similar value "correction"
651
+ corrects an error in previously
652
+ published material
653
+ announcement
654
+ Material announced in the
655
+ publication (may or may not be
656
+ directly related to the pub)
657
+ article-commentary
658
+ An item whose subject or focus
659
+ is another article or articles;
660
+ this article comments on the
661
+ other article(s) (For example,
662
+ for a controversial article, the
663
+ editors of the publication
664
+ might invite an author of the
665
+ opposing opinion to comment on
666
+ the first article, and publish
667
+ the two together.)
668
+ book-review
669
+ Review or analysis of one or more
670
+ printed or online books (Note
671
+ that product reviews are a
672
+ separate type.)
673
+ books-received
674
+ Notification of items such as
675
+ books that have been received
676
+ by the publication for review
677
+ or other consideration
678
+ brief-report
679
+ A short and/or rapid announcement
680
+ of research results
681
+ calendar A list of events
682
+ case-report
683
+ Case study, case report, or other
684
+ description of a case
685
+ correction A modification, or
686
+ correction of previously
687
+ published material (sometimes
688
+ called "errata") Similar value
689
+ "addendum" merely adds to
690
+ previously published material
691
+ discussion Invited discussion related to a
692
+ specific article or issue
693
+ editorial Opinion piece, policy statement,
694
+ or general commentary, typically
695
+ written by staff of the
696
+ publication. Note: similar value
697
+ "article-commentary" is reserved
698
+ for a commentary on a specific
699
+ article or articles.
700
+ in-brief Summary of items in the current
701
+ issue
702
+ introduction
703
+ An introduction to the
704
+ publication, a series of articles
705
+ within the publication, etc.,
706
+ typically for a special section
707
+ or issue
708
+ letter Letter to the publication,
709
+ typically commenting upon a
710
+ published item
711
+ meeting-report
712
+ Report of a conference,
713
+ symposium, or meeting
714
+ news News item
715
+ obituary Announcement of a death or
716
+ appreciation of a colleague
717
+ who has recently died
718
+ oration Reprint of a speech or oral
719
+ presentation
720
+ other Not any of the article types
721
+ explicitly named in this list
722
+ product-review
723
+ Description, analysis, or review
724
+ of a product or service, for
725
+ example a software package (note
726
+ that book review is a separate
727
+ type)
728
+ reply Reply to a letter or commentary,
729
+ typically by the original
730
+ author commenting upon the
731
+ comments
732
+ research-article
733
+ Research article
734
+ retraction Retraction of previously
735
+ published material
736
+ review-article
737
+ Review or state-of-the-art
738
+ summary article
739
+ xml:lang The language in which the value of the
740
+ element is expressed. Recommended best
741
+ practice is to use values as defined in
742
+ RFC 1766, typically 2-letter language
743
+ codes such as "FR" (French), "EN" (English),
744
+ and "DE" (German). These values are NOT
745
+ case sensitive, so "EN" = "en". The values
746
+ may include hyphenated differentiators such
747
+ as "EN-AU" (Australian English) and "EN-US"
748
+ (United States English).
749
+ Processing and Conversion Note: All other
750
+ xml:lang attributes within the article
751
+ inherit the value set on <article> unless
752
+ explicitly set themselves with their own
753
+ "xml:lang" attribute. -->
754
+ <!ATTLIST sub-article
755
+ article-type
756
+ (%article-types;) #IMPLIED
757
+ xml:lang NMTOKEN "EN" >
758
+
759
+
760
+ <!-- ============================================================= -->
761
+ <!-- RESPONSE ELEMENTS -->
762
+ <!-- ============================================================= -->
763
+
764
+
765
+ <!-- RESPONSE -->
766
+ <!-- Reply, response, or commentary concerning the
767
+ journal article. In the typical case, the
768
+ response is included in the same XML package
769
+ as the original article, and thus attached
770
+ at the end of the article proper.
771
+ Authoring Note: Frequently a reply or
772
+ response is an article in its own right, not
773
+ included as part of the original article.
774
+ Such an article could use the
775
+ <related-article> element in the article
776
+ metadata to record the metadata for the
777
+ original article.
778
+ Conversion Note: This construction can also
779
+ be used for the pathological case, rarely
780
+ seen, in which several responses to an
781
+ article are lumped together into a single
782
+ container which is not the original article,
783
+ merely a collection of responses. In one
784
+ example we examined, the first two responses
785
+ were to an original article which was else-
786
+ where and the third response was a response
787
+ to the first two responses. -->
788
+ <!ELEMENT response (%article-short-model;) >
789
+
790
+ <!-- response-type
791
+ What kind of response is this?
792
+ Note: This does NOT define the kind of
793
+ article on which the response is commenting,
794
+ it is metadata for the response itself.
795
+ Authoring Note: Use of this attribute is not
796
+ to be encouraged. It was added to allow for
797
+ observed cases of a series of articles
798
+ being chained together as an introduction,
799
+ an article, and several responses.
800
+ xml:lang The language in which the value of the
801
+ element is expressed. Recommended best
802
+ practice is to use values as defined in
803
+ RFC 1766, typically 2-letter language
804
+ codes such as "FR" (French), "EN" (English),
805
+ and "DE" (German). These values are NOT
806
+ case sensitive, so "EN" = "en". The values
807
+ may include hyphenated differentiators such
808
+ as "EN-AU" (Australian English) and "EN-US"
809
+ (United States English).
810
+ Processing and Conversion Note: All other
811
+ xml:lang attributes within the article
812
+ inherit the value set on <article> unless
813
+ explicitly set themselves with their own
814
+ "xml:lang" attribute. -->
815
+ <!ATTLIST response
816
+ %response-atts; >
817
+
818
+
819
+ <!-- ================== End Journal Archiving and Interchange DTD -->