xml_jats_resolver 0.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1312) hide show
  1. checksums.yaml +7 -0
  2. data/.travis.yml +6 -0
  3. data/CHANGELOG.md +3 -0
  4. data/Gemfile +8 -0
  5. data/LICENSE.md +25 -0
  6. data/README.md +3 -0
  7. data/Rakefile +10 -0
  8. data/lib/dtd/archiving_dtd/1.0/dtd/XHTMLtablesetup.ent +247 -0
  9. data/lib/dtd/archiving_dtd/1.0/dtd/archivearticle.dtd +815 -0
  10. data/lib/dtd/archiving_dtd/1.0/dtd/archivecustomize.ent +583 -0
  11. data/lib/dtd/archiving_dtd/1.0/dtd/articlemeta.ent +1431 -0
  12. data/lib/dtd/archiving_dtd/1.0/dtd/backmatter.ent +216 -0
  13. data/lib/dtd/archiving_dtd/1.0/dtd/catalog.ent +76 -0
  14. data/lib/dtd/archiving_dtd/1.0/dtd/chars.ent +333 -0
  15. data/lib/dtd/archiving_dtd/1.0/dtd/checksum.md5 +83 -0
  16. data/lib/dtd/archiving_dtd/1.0/dtd/common.ent +1609 -0
  17. data/lib/dtd/archiving_dtd/1.0/dtd/display.ent +988 -0
  18. data/lib/dtd/archiving_dtd/1.0/dtd/format.ent +403 -0
  19. data/lib/dtd/archiving_dtd/1.0/dtd/htmltable.dtd +334 -0
  20. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsa.ent +173 -0
  21. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsb.ent +146 -0
  22. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsc.ent +49 -0
  23. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsn.ent +117 -0
  24. data/lib/dtd/archiving_dtd/1.0/dtd/isoamso.ent +77 -0
  25. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsr.ent +205 -0
  26. data/lib/dtd/archiving_dtd/1.0/dtd/isobox.ent +67 -0
  27. data/lib/dtd/archiving_dtd/1.0/dtd/isocyr1.ent +94 -0
  28. data/lib/dtd/archiving_dtd/1.0/dtd/isocyr2.ent +53 -0
  29. data/lib/dtd/archiving_dtd/1.0/dtd/isodia.ent +41 -0
  30. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk1.ent +1 -1
  31. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk2.ent +1 -1
  32. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk3.ent +70 -0
  33. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk4.ent +1 -1
  34. data/lib/dtd/archiving_dtd/1.0/dtd/isolat1.ent +89 -0
  35. data/lib/dtd/archiving_dtd/1.0/dtd/isolat2.ent +148 -0
  36. data/lib/dtd/archiving_dtd/1.0/dtd/isomfrk.ent +79 -0
  37. data/lib/dtd/archiving_dtd/1.0/dtd/isomopf.ent +53 -0
  38. data/lib/dtd/archiving_dtd/1.0/dtd/isomscr.ent +79 -0
  39. data/lib/dtd/archiving_dtd/1.0/dtd/isonum.ent +103 -0
  40. data/lib/dtd/archiving_dtd/1.0/dtd/isopub.ent +110 -0
  41. data/lib/dtd/archiving_dtd/1.0/dtd/isotech.ent +183 -0
  42. data/lib/dtd/archiving_dtd/1.0/dtd/journalmeta.ent +269 -0
  43. data/lib/dtd/archiving_dtd/1.0/dtd/link.ent +417 -0
  44. data/lib/dtd/archiving_dtd/1.0/dtd/list.ent +361 -0
  45. data/lib/dtd/archiving_dtd/1.0/dtd/math.ent +220 -0
  46. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mathml2-qname-1.mod +275 -0
  47. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mmlalias.ent +564 -0
  48. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mmlextra.ent +128 -0
  49. data/lib/dtd/archiving_dtd/1.0/dtd/mathml2-qname-1.mod +275 -0
  50. data/lib/dtd/archiving_dtd/1.0/dtd/mathml2.dtd +1960 -0
  51. data/lib/dtd/archiving_dtd/1.0/dtd/mathmlsetup.ent +141 -0
  52. data/lib/dtd/archiving_dtd/1.0/dtd/mmlalias.ent +564 -0
  53. data/lib/dtd/archiving_dtd/1.0/dtd/mmlextra.ent +128 -0
  54. data/lib/dtd/archiving_dtd/1.0/dtd/modules.ent +344 -0
  55. data/lib/dtd/archiving_dtd/1.0/dtd/notat.ent +147 -0
  56. data/lib/dtd/archiving_dtd/1.0/dtd/oasis-exchange.ent +354 -0
  57. data/lib/dtd/archiving_dtd/1.0/dtd/oasis-tablesetup.ent +258 -0
  58. data/lib/dtd/archiving_dtd/1.0/dtd/para.ent +320 -0
  59. data/lib/dtd/archiving_dtd/1.0/dtd/phrase.ent +213 -0
  60. data/lib/dtd/archiving_dtd/1.0/dtd/readme.txt +247 -0
  61. data/lib/dtd/archiving_dtd/1.0/dtd/references.ent +559 -0
  62. data/lib/dtd/archiving_dtd/1.0/dtd/sampleminimal.xml +5 -0
  63. data/lib/dtd/archiving_dtd/1.0/dtd/samplesmall.xml +84 -0
  64. data/lib/dtd/archiving_dtd/1.0/dtd/section.ent +205 -0
  65. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsa.ent +173 -0
  66. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsb.ent +146 -0
  67. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsc.ent +49 -0
  68. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsn.ent +117 -0
  69. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamso.ent +77 -0
  70. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsr.ent +205 -0
  71. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isobox.ent +67 -0
  72. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isocyr1.ent +94 -0
  73. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isocyr2.ent +53 -0
  74. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isodia.ent +41 -0
  75. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk1.ent +1 -1
  76. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk2.ent +1 -1
  77. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk3.ent +70 -0
  78. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk4.ent +1 -1
  79. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isolat1.ent +89 -0
  80. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isolat2.ent +148 -0
  81. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomfrk.ent +79 -0
  82. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomopf.ent +53 -0
  83. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomscr.ent +79 -0
  84. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isonum.ent +103 -0
  85. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isopub.ent +110 -0
  86. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isotech.ent +183 -0
  87. data/lib/dtd/archiving_dtd/1.0/dtd/xmlspecchars.ent +274 -0
  88. data/lib/dtd/archiving_dtd/1.1/dtd/XHTMLtablesetup.ent +289 -0
  89. data/lib/dtd/archiving_dtd/1.1/dtd/archivearticle.dtd +819 -0
  90. data/lib/dtd/archiving_dtd/1.1/dtd/archivecustomize.ent +597 -0
  91. data/lib/dtd/archiving_dtd/1.1/dtd/articlemeta.ent +1464 -0
  92. data/lib/dtd/archiving_dtd/1.1/dtd/backmatter.ent +216 -0
  93. data/lib/dtd/archiving_dtd/1.1/dtd/catalog.ent +76 -0
  94. data/lib/dtd/archiving_dtd/1.1/dtd/chars.ent +340 -0
  95. data/lib/dtd/archiving_dtd/1.1/dtd/common.ent +1674 -0
  96. data/lib/dtd/archiving_dtd/1.1/dtd/display.ent +1334 -0
  97. data/lib/dtd/archiving_dtd/1.1/dtd/format.ent +401 -0
  98. data/lib/dtd/archiving_dtd/1.1/dtd/htmltable.dtd +334 -0
  99. data/lib/dtd/archiving_dtd/1.1/dtd/journalmeta.ent +283 -0
  100. data/lib/dtd/archiving_dtd/1.1/dtd/link.ent +475 -0
  101. data/lib/dtd/archiving_dtd/1.1/dtd/list.ent +416 -0
  102. data/lib/dtd/archiving_dtd/1.1/dtd/math.ent +288 -0
  103. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mathml2-qname-1.mod +1 -3
  104. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mmlalias.ent +1 -1
  105. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mmlextra.ent +1 -1
  106. data/lib/dtd/archiving_dtd/1.1/dtd/mathml2.dtd +1960 -0
  107. data/lib/dtd/archiving_dtd/1.1/dtd/mathmlsetup.ent +171 -0
  108. data/lib/dtd/archiving_dtd/1.1/dtd/modules.ent +349 -0
  109. data/lib/dtd/archiving_dtd/1.1/dtd/notat.ent +147 -0
  110. data/lib/dtd/archiving_dtd/1.1/dtd/oasis-exchange.ent +354 -0
  111. data/lib/dtd/archiving_dtd/1.1/dtd/oasis-tablesetup.ent +298 -0
  112. data/lib/dtd/archiving_dtd/1.1/dtd/para.ent +368 -0
  113. data/lib/dtd/archiving_dtd/1.1/dtd/phrase.ent +244 -0
  114. data/lib/dtd/archiving_dtd/1.1/dtd/references.ent +560 -0
  115. data/lib/dtd/archiving_dtd/1.1/dtd/section.ent +202 -0
  116. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsa.ent +1 -1
  117. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsb.ent +1 -1
  118. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsc.ent +1 -1
  119. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsn.ent +1 -1
  120. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamso.ent +1 -1
  121. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsr.ent +1 -1
  122. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isobox.ent +1 -1
  123. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isocyr1.ent +1 -1
  124. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isocyr2.ent +1 -1
  125. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isodia.ent +1 -1
  126. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk1.ent +1 -1
  127. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk2.ent +1 -1
  128. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk3.ent +1 -1
  129. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk4.ent +1 -1
  130. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isolat1.ent +1 -1
  131. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isolat2.ent +1 -1
  132. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomfrk.ent +1 -1
  133. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomopf.ent +1 -1
  134. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomscr.ent +1 -1
  135. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isonum.ent +1 -1
  136. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isopub.ent +1 -1
  137. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isotech.ent +1 -1
  138. data/lib/dtd/archiving_dtd/1.1/dtd/xmlspecchars.ent +274 -0
  139. data/lib/dtd/archiving_dtd/2.0/dtd/Readme.txt +225 -0
  140. data/lib/dtd/archiving_dtd/2.0/dtd/XHTMLtablesetup.ent +309 -0
  141. data/lib/dtd/archiving_dtd/2.0/dtd/archivearticle.dtd +952 -0
  142. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-classes.ent +157 -0
  143. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-mixes.ent +306 -0
  144. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-models.ent +756 -0
  145. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-modules.ent +116 -0
  146. data/lib/dtd/archiving_dtd/2.0/dtd/articlemeta.ent +1811 -0
  147. data/lib/dtd/archiving_dtd/2.0/dtd/backmatter.ent +277 -0
  148. data/lib/dtd/archiving_dtd/2.0/dtd/catalog.ent +115 -0
  149. data/lib/dtd/archiving_dtd/2.0/dtd/chars.ent +359 -0
  150. data/lib/dtd/archiving_dtd/2.0/dtd/common.ent +2790 -0
  151. data/lib/dtd/archiving_dtd/2.0/dtd/default-classes.ent +704 -0
  152. data/lib/dtd/archiving_dtd/2.0/dtd/default-mixes.ent +357 -0
  153. data/lib/dtd/archiving_dtd/2.0/dtd/display.ent +1468 -0
  154. data/lib/dtd/archiving_dtd/2.0/dtd/format.ent +412 -0
  155. data/lib/dtd/archiving_dtd/2.0/dtd/htmltable.dtd +334 -0
  156. data/lib/dtd/archiving_dtd/2.0/dtd/journalmeta.ent +341 -0
  157. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-classes.ent +200 -0
  158. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-mixes.ent +207 -0
  159. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-models.ent +859 -0
  160. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-modules.ent +125 -0
  161. data/lib/dtd/archiving_dtd/2.0/dtd/journalpublishing.dtd +955 -0
  162. data/lib/dtd/archiving_dtd/2.0/dtd/link.ent +510 -0
  163. data/lib/dtd/archiving_dtd/2.0/dtd/list.ent +465 -0
  164. data/lib/dtd/archiving_dtd/2.0/dtd/math.ent +329 -0
  165. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mathml2-qname-1.mod +1 -3
  166. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mmlalias.ent +1 -1
  167. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mmlextra.ent +1 -1
  168. data/lib/dtd/archiving_dtd/2.0/dtd/mathml2.dtd +1960 -0
  169. data/lib/dtd/archiving_dtd/2.0/dtd/mathmlsetup.ent +191 -0
  170. data/lib/dtd/archiving_dtd/2.0/dtd/modules.ent +417 -0
  171. data/lib/dtd/archiving_dtd/2.0/dtd/nlmcitation.ent +124 -0
  172. data/lib/dtd/archiving_dtd/2.0/dtd/notat.ent +172 -0
  173. data/lib/dtd/archiving_dtd/2.0/dtd/oasis-exchange.ent +354 -0
  174. data/lib/dtd/archiving_dtd/2.0/dtd/oasis-tablesetup.ent +308 -0
  175. data/lib/dtd/archiving_dtd/2.0/dtd/para.ent +420 -0
  176. data/lib/dtd/archiving_dtd/2.0/dtd/phrase.ent +278 -0
  177. data/lib/dtd/archiving_dtd/2.0/dtd/references.ent +726 -0
  178. data/lib/dtd/archiving_dtd/2.0/dtd/samplesmall-green.xml +1 -0
  179. data/lib/dtd/archiving_dtd/2.0/dtd/samplesmall-pub.xml +1 -0
  180. data/lib/dtd/archiving_dtd/2.0/dtd/section.ent +220 -0
  181. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsa.ent +1 -1
  182. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsb.ent +1 -1
  183. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsc.ent +1 -1
  184. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsn.ent +1 -1
  185. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamso.ent +1 -1
  186. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsr.ent +1 -1
  187. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isobox.ent +1 -1
  188. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isocyr1.ent +1 -1
  189. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isocyr2.ent +1 -1
  190. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isodia.ent +1 -1
  191. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk1.ent +1 -1
  192. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk2.ent +1 -1
  193. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk3.ent +1 -1
  194. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk4.ent +1 -1
  195. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isolat1.ent +1 -1
  196. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isolat2.ent +1 -1
  197. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomfrk.ent +1 -1
  198. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomopf.ent +1 -1
  199. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomscr.ent +1 -1
  200. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isonum.ent +97 -0
  201. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isopub.ent +1 -1
  202. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isotech.ent +1 -1
  203. data/lib/dtd/archiving_dtd/2.0/dtd/xmlspecchars.ent +290 -0
  204. data/lib/dtd/archiving_dtd/2.1/dtd/ArchiveReadme.txt +283 -0
  205. data/lib/dtd/archiving_dtd/2.1/dtd/XHTMLtablesetup.ent +320 -0
  206. data/lib/dtd/archiving_dtd/2.1/dtd/archivearticle.dtd +981 -0
  207. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-classes.ent +173 -0
  208. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-mixes.ent +317 -0
  209. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-models.ent +777 -0
  210. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-modules.ent +125 -0
  211. data/lib/dtd/archiving_dtd/2.1/dtd/articlemeta.ent +1816 -0
  212. data/lib/dtd/archiving_dtd/2.1/dtd/backmatter.ent +288 -0
  213. data/lib/dtd/archiving_dtd/2.1/dtd/catalog-v2.xml +577 -0
  214. data/lib/dtd/archiving_dtd/2.1/dtd/catalog.ent +179 -0
  215. data/lib/dtd/archiving_dtd/2.1/dtd/chars.ent +359 -0
  216. data/lib/dtd/archiving_dtd/2.1/dtd/common.ent +2991 -0
  217. data/lib/dtd/archiving_dtd/2.1/dtd/default-classes.ent +738 -0
  218. data/lib/dtd/archiving_dtd/2.1/dtd/default-mixes.ent +368 -0
  219. data/lib/dtd/archiving_dtd/2.1/dtd/display.ent +1480 -0
  220. data/lib/dtd/archiving_dtd/2.1/dtd/format.ent +412 -0
  221. data/lib/dtd/archiving_dtd/2.1/dtd/htmltable.dtd +334 -0
  222. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isobox.ent +61 -0
  223. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isocyr1.ent +88 -0
  224. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isocyr2.ent +47 -0
  225. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isodia.ent +35 -0
  226. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isolat1.ent +83 -0
  227. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isolat2.ent +142 -0
  228. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isonum.ent +97 -0
  229. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isopub.ent +105 -0
  230. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsa.ent +167 -0
  231. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsb.ent +143 -0
  232. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsc.ent +43 -0
  233. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsn.ent +114 -0
  234. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamso.ent +73 -0
  235. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsr.ent +204 -0
  236. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isogrk3.ent +64 -0
  237. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomfrk.ent +75 -0
  238. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomopf.ent +49 -0
  239. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomscr.ent +75 -0
  240. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isotech.ent +182 -0
  241. data/lib/dtd/archiving_dtd/2.1/dtd/journalmeta.ent +328 -0
  242. data/lib/dtd/archiving_dtd/2.1/dtd/link.ent +521 -0
  243. data/lib/dtd/archiving_dtd/2.1/dtd/list.ent +496 -0
  244. data/lib/dtd/archiving_dtd/2.1/dtd/math.ent +328 -0
  245. data/lib/dtd/archiving_dtd/2.1/dtd/mathml/mmlalias.ent +564 -0
  246. data/lib/dtd/archiving_dtd/2.1/dtd/mathml/mmlextra.ent +122 -0
  247. data/lib/dtd/archiving_dtd/2.1/dtd/mathml2-qname-1.mod +286 -0
  248. data/lib/dtd/archiving_dtd/2.1/dtd/mathml2.dtd +2206 -0
  249. data/lib/dtd/archiving_dtd/2.1/dtd/mathmlsetup.ent +280 -0
  250. data/lib/dtd/archiving_dtd/2.1/dtd/modules.ent +438 -0
  251. data/lib/dtd/archiving_dtd/2.1/dtd/notat.ent +172 -0
  252. data/lib/dtd/archiving_dtd/2.1/dtd/oasis-exchange.ent +354 -0
  253. data/lib/dtd/archiving_dtd/2.1/dtd/oasis-tablesetup.ent +308 -0
  254. data/lib/dtd/archiving_dtd/2.1/dtd/para.ent +445 -0
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  1181. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-ali-namespace1.ent +154 -0
  1182. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-article1.dtd +894 -0
  1183. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-custom-classes1.ent +326 -0
  1184. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-custom-modules1.ent +269 -0
  1185. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archivecustom-mixes1.ent +420 -0
  1186. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archivecustom-models1.ent +1339 -0
  1187. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-articlemeta1.ent +1817 -0
  1188. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-backmatter1.ent +393 -0
  1189. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-chars1.ent +525 -0
  1190. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-common-atts1.ent +221 -0
  1191. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-common1.ent +4273 -0
  1192. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-default-classes1.ent +1277 -0
  1193. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-default-mixes1.ent +455 -0
  1194. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-display1.ent +1000 -0
  1195. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-format1.ent +858 -0
  1196. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-funding1.ent +547 -0
  1197. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-journalmeta1.ent +454 -0
  1198. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-link1.ent +416 -0
  1199. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-list1.ent +494 -0
  1200. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-math1.ent +402 -0
  1201. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-mathmlsetup1.ent +348 -0
  1202. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-modules1.ent +584 -0
  1203. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-nlmcitation1.ent +285 -0
  1204. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-notat1.ent +269 -0
  1205. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-oasis-namespace1.ent +223 -0
  1206. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-oasis-tablesetup1.ent +409 -0
  1207. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-para1.ent +481 -0
  1208. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-phrase1.ent +502 -0
  1209. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-references1.ent +1205 -0
  1210. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-related-object1.ent +283 -0
  1211. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-section1.ent +324 -0
  1212. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-xmlspecchars1.ent +389 -0
  1213. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/catalog-jats-v1-1-no-base.xml +946 -0
  1214. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/catalog-jats-v1-1-with-base.xml +951 -0
  1215. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isobox.ent +61 -0
  1216. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isocyr1.ent +88 -0
  1217. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isocyr2.ent +47 -0
  1218. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isodia.ent +35 -0
  1219. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isolat1.ent +83 -0
  1220. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isolat2.ent +142 -0
  1221. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isonum.ent +97 -0
  1222. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso8879/isopub.ent +105 -0
  1223. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamsa.ent +167 -0
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  1226. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamsn.ent +114 -0
  1227. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamso.ent +73 -0
  1228. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isoamsr.ent +204 -0
  1229. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isogrk3.ent +64 -0
  1230. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isomfrk.ent +75 -0
  1231. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isomopf.ent +49 -0
  1232. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isomscr.ent +75 -0
  1233. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/iso9573-13/isotech.ent +182 -0
  1234. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml/mmlalias.ent +564 -0
  1235. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml/mmlextra.ent +122 -0
  1236. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml2-qname-1.mod +286 -0
  1237. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/mathml2.dtd +2206 -0
  1238. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/oasis-exchange.ent +449 -0
  1239. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xhtml-inlstyle-1.mod +34 -0
  1240. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xhtml-table-1.mod +333 -0
  1241. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xmlchars/isogrk1.ent +70 -0
  1242. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xmlchars/isogrk2.ent +41 -0
  1243. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/xmlchars/isogrk4.ent +66 -0
  1244. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-XHTMLtablesetup1.ent +501 -0
  1245. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-ali-namespace1.ent +154 -0
  1246. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archive-oasis-article1-mathml3.dtd +911 -0
  1247. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archive-oasis-custom-classes1.ent +326 -0
  1248. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archive-oasis-custom-modules1.ent +269 -0
  1249. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archivecustom-mixes1.ent +420 -0
  1250. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-archivecustom-models1.ent +1339 -0
  1251. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-articlemeta1.ent +1817 -0
  1252. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-backmatter1.ent +393 -0
  1253. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-chars1.ent +525 -0
  1254. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-common-atts1.ent +221 -0
  1255. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-common1.ent +4273 -0
  1256. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-default-classes1.ent +1277 -0
  1257. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-default-mixes1.ent +455 -0
  1258. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-display1.ent +1000 -0
  1259. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-format1.ent +858 -0
  1260. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-funding1.ent +547 -0
  1261. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-journalmeta1.ent +454 -0
  1262. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-link1.ent +416 -0
  1263. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-list1.ent +494 -0
  1264. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-math1.ent +402 -0
  1265. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-mathml3-mathmlsetup1.ent +350 -0
  1266. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-mathml3-modules1.ent +190 -0
  1267. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-modules1.ent +584 -0
  1268. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-nlmcitation1.ent +285 -0
  1269. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-notat1.ent +269 -0
  1270. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-oasis-namespace1.ent +223 -0
  1271. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-oasis-tablesetup1.ent +409 -0
  1272. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-para1.ent +481 -0
  1273. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-phrase1.ent +502 -0
  1274. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-references1.ent +1205 -0
  1275. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-related-object1.ent +283 -0
  1276. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-section1.ent +324 -0
  1277. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-xmlspecchars1.ent +389 -0
  1278. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/catalog-jats-v1-1-no-base.xml +946 -0
  1279. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/catalog-jats-v1-1-with-base.xml +951 -0
  1280. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isobox.ent +61 -0
  1281. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isocyr1.ent +88 -0
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  1283. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isodia.ent +35 -0
  1284. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isolat1.ent +83 -0
  1285. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isolat2.ent +142 -0
  1286. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isonum.ent +97 -0
  1287. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isopub.ent +105 -0
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  1298. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso9573-13/isotech.ent +182 -0
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  1300. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/mathml/mmlextra.ent +122 -0
  1301. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/mathml3-qname1.mod +294 -0
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  1308. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/xmlchars/isogrk4.ent +66 -0
  1309. data/lib/errors.rb +21 -0
  1310. data/lib/xml_jats_resolver.rb +64 -0
  1311. data/xml_jats_resolver.gemspec +24 -0
  1312. metadata +1396 -0
data/lib/dtd/atypon/2.2/dtd/archivearticle.dtd ADDED
@@ -0,0 +1,1116 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Journal Archiving and Interchange DTD -->
3
+ <!-- VERSION: 2.2 -->
4
+ <!-- DATE: March 2009 -->
5
+ <!-- -->
6
+ <!-- ============================================================= -->
7
+
8
+ <!-- ============================================================= -->
9
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
10
+ <!-- TYPICAL INVOCATION -->
11
+ <!--
12
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Suite v2.2.0 20090301//EN"
13
+ Delivered as file "archivearticle.dtd" -->
14
+ <!-- ============================================================= -->
15
+
16
+
17
+ <!-- ============================================================= -->
18
+ <!-- SYSTEM: Journal Archiving and Interchange DTD of the -->
19
+ <!-- Archiving and Interchange DTD Suite -->
20
+ <!-- -->
21
+ <!-- PURPOSE: DTD to describe a full-text journal article -->
22
+ <!-- -->
23
+ <!-- The Journal Archiving and Interchange DTD -->
24
+ <!-- describes journal articles and some non-article -->
25
+ <!-- material such as product and book reviews for -->
26
+ <!-- repository or interchange purposes. It describes -->
27
+ <!-- both the metadata for a journal article and the -->
28
+ <!-- full content of the article. -->
29
+ <!-- This DTD was constructed using the modules in the -->
30
+ <!-- Archiving and Interchange DTD Suite, using almost -->
31
+ <!-- no customization. -->
32
+ <!-- -->
33
+ <!-- CONTAINS: 1) Declare and invoke the Archival (Green) DTD- -->
34
+ <!-- specific module of modules, that names any -->
35
+ <!-- modules created expressly for this DTD. -->
36
+ <!-- (%archivecustom-modules.ent;) -->
37
+ <!-- 2) Declare and invoke the DTD Suite module of -->
38
+ <!-- modules (%modules.ent;), the Archiving and -->
39
+ <!-- Interchange Suite module that names all the -->
40
+ <!-- Suite modules this DTD might invoke -->
41
+ <!-- 3) Invoke DTD-specific classes over-ride module -->
42
+ <!-- (%archivecustom-classes.ent;) -->
43
+ <!-- 4) Invoke Suite default classes -->
44
+ <!-- (%default-classes.ent;) -->
45
+ <!-- 5) Invoke DTD-specific mixes over-ride module -->
46
+ <!-- (%archivecustom-mixes.ent;) -->
47
+ <!-- 6) Invoke Suite default mixes -->
48
+ <!-- (%default-mixes.ent;) -->
49
+ <!-- 7) Invoke DTD-specific content model over-ride -->
50
+ <!-- module (%archivecustom-models.ent;) -->
51
+ <!-- 8) Invoke the Common Element Module (from Suite) -->
52
+ <!-- 9) Invoke all the Class Modules (from Suite) as -->
53
+ <!-- well as any DTD-specific element modules -->
54
+ <!-- 10) Parameter Entities for attribute values used -->
55
+ <!-- in this module (DTD-specific definitions) -->
56
+ <!-- 11) Define document element (Article <article>) -->
57
+ <!-- 12) Define Front Matter <front> -->
58
+ <!-- 13) Define Body Matter <body> -->
59
+ <!-- 14) Define Back Matter <back> -->
60
+ <!-- -->
61
+ <!-- CREATED FOR: -->
62
+ <!-- Digital Archive of Journal Articles -->
63
+ <!-- National Center for Biotechnology Information -->
64
+ <!-- (NCBI) -->
65
+ <!-- National Library of Medicine (NLM) -->
66
+ <!-- -->
67
+ <!-- ORIGINAL CREATION DATE: -->
68
+ <!-- December 2002 -->
69
+ <!-- -->
70
+ <!-- CREATED BY: Jeff Beck (NCBI) -->
71
+ <!-- Deborah Lapeyre (Mulberry Technologies, Inc.) -->
72
+ <!-- Bruce Rosenblum (Inera Inc.) -->
73
+ <!-- -->
74
+ <!-- The Journal Archiving and Interchange DTD is -->
75
+ <!-- built from the Archiving and Interchange DTD -->
76
+ <!-- Suite. -->
77
+ <!-- -->
78
+ <!-- The Archiving and Interchange DTD Suite evolved -->
79
+ <!-- from NLM/NCBI's pmc-1 DTD. -->
80
+ <!-- -->
81
+ <!-- NLM thanks the Harvard University Libraries, both -->
82
+ <!-- for proposing that a draft archiving NLM DTD for -->
83
+ <!-- life sciences journals be extended to accommodate -->
84
+ <!-- journals in all disciplines and for sponsoring -->
85
+ <!-- Bruce Rosenblum's collaboration with other DTD -->
86
+ <!-- authors in completing Version 1.0. The Andrew W. -->
87
+ <!-- Mellon Foundation provided support for these -->
88
+ <!-- important contributions. -->
89
+ <!-- contributions. -->
90
+ <!-- -->
91
+ <!-- Suggestions for refinements and enhancements to -->
92
+ <!-- this DTD should be sent in email to: -->
93
+ <!-- archive-dtd@ncbi.nlm.nih.gov -->
94
+ <!-- ============================================================= -->
95
+
96
+
97
+ <!-- ============================================================= -->
98
+ <!-- DTD VERSION/CHANGE HISTORY -->
99
+ <!-- ============================================================= -->
100
+ <!--
101
+
102
+ =============================================================
103
+
104
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
105
+
106
+ =============================================================
107
+ Version 2.2 (DAL/BTU) v2.2 (2006-04-30)
108
+
109
+ Backwards-compatible changes to meet operational needs.
110
+ Typical changes include adding attribute values and making
111
+ required elements optional.
112
+
113
+ 17. DTD VERSION ATTRIBUTE - Fixed attribute value changed from "2.1"
114
+ to "2.2" to reflect latest version of DTD
115
+
116
+ 16. RESPONSE TYPE ATTRIBUTE - Only the comment has changed to reflect
117
+ the usage. First, the use of the attribute is no longer
118
+ discouraged. Second, there are a few suggested values.
119
+
120
+ 15. SUB-ARTICLE/RESPONSE METADATA
121
+ a. Added new element <front-stub> as an alternative to the
122
+ typical <front> metadata inside a <sub-article>, so that not
123
+ as much metadata is replicated between the article and
124
+ sub-article. For example, a <sub-article> that uses a
125
+ <front-stub> will inherit all of its <journal-meta> from the
126
+ journal meta of the associated article.
127
+
128
+ b. Changed the model for %article-short-model; (which is used
129
+ only for <response> to also use <front-stub>
130
+
131
+ 14. ID ATTRIBUTES- Added <sub-article> and <response> through
132
+ their attribute Parameter Entities
133
+
134
+ 13. SIGNATURE BLOCK- Added <sig-block> to the end of article <body>
135
+
136
+ 12. ARTICLE TYPES ATTRIBUTE - Added new values to the list of
137
+ suggested values in the comments:
138
+ - collection
139
+ - dissertation
140
+ - partial-retraction
141
+ - rapid-communication
142
+ - reprint
143
+ - translation
144
+
145
+ 11. Updated public identifier to "v2.2 20060430//EN"
146
+
147
+ =============================================================
148
+ Version 2.1 (DAL/BTU) v2.1 (2005-06-30)
149
+
150
+
151
+ Changed to MathML 2.0 and MathML 2.0 Character Sets
152
+ Added new material requested by the online list
153
+
154
+ 10. Modified Module of Modules to include new MathML 2.0 DTD
155
+ (mathml2.dtd,v 1.12 2003/11/04) and modified entity
156
+ "xmlspecchars.ent" to include the new MathML Character sets
157
+ which match Unicode 4.0.
158
+
159
+ Implementor Alert: New directory structure for the character
160
+ sets was also adopted, to match the new MathML directories.
161
+
162
+ Implementor Alert: New directory structure for the character
163
+ sets was also adopted, to match the new MathML directories.
164
+ There are now 3 character set directories:
165
+ - iso8879 (from SGML used in MathML)
166
+ - iso9573-13 (from ISO Tech Rpt used in MathML)
167
+ - xmlchars (from SGML not used in MathML)
168
+
169
+ 9. Updated public identifier to "v2.1 20050630", modified the
170
+ fpis of the updated modules (both publishing custom modules
171
+ and the Suite modules), and changed the "dtd-version" fixed
172
+ attribute to reference latest version of DTD (version "2.1").
173
+
174
+ =============================================================
175
+ Version 2.0 (DAL/BTU) v2.0 (2004-07-30)
176
+
177
+
178
+ Major requirement changes led to the new release, producing
179
+ DTD version "2.0":
180
+ a) The splitting of the Archival and Interchange Tag Set
181
+ DTDs into three DTDs from two: an authoring DTD, an
182
+ archive regularization and interchange DTD (the
183
+ current Blue Publishing DTD), and a preservationist
184
+ archive DTD (the current Green Archiving and Interchange
185
+ DTD).
186
+ b) AIT Working Group suggestions from the June 04 meeting
187
+ and June/July 2004 followup discussions
188
+ c) Suite remodularization to meet new (and newly articulated)
189
+ modularization requirements
190
+ d) New or renamed classes and mixes to make modifications
191
+ easier and more consistent
192
+
193
+ 8. COMPLETE MODELS WHEN OVER-RIDING A CONTENT MODEL
194
+ (for all Parameter Entities suffixed "-model")
195
+ ### Customization Alert ###
196
+ Made all the model over-rides consistent. Some included
197
+ the outer parentheses, some did not. They all do now.
198
+ Added parentheses to Parameter Entity and removed them
199
+ from the Element Declarations:
200
+ - %article-short-model;
201
+ - %article-full-model;
202
+ - %front-model;
203
+ - %body-model;
204
+ - %back-model;
205
+
206
+ 7. ATTRIBUTE VALUE LISTS
207
+ a. For the Green (Preservationist Archival) DTD, changed all
208
+ explicit attribute value lists to CDATA. In the future,
209
+ attribute value lists will be a feature of the Blue
210
+ (Publishing) and new Authoring DTDs.
211
+ - Added Parameter Entities to hold "date-type"
212
+ - Changed the following attributes:
213
+ article-type (in %article-atts;)
214
+ b. Removed Parameter Entity definition for
215
+ %article-types: since it was not being used at all!
216
+ The attribute takes CDATA values.
217
+
218
+ c. SUBARTICLE ATTRIBUTES - made into a Parameter Entity
219
+
220
+
221
+ 6. PARAMETER ENTITY CLEANUP AND REGULARIZATION
222
+
223
+ a. RENAME ELEMENT MIXES NOT TO END IN "-elements"
224
+ ### Customization Alert ###
225
+ Names ending in "-elements" saved for the particular mixes
226
+ that will be added to #PCDATA for a particular element,
227
+ therefore:
228
+ - %doc-back-matter-elements; ==> %doc-back-matter-mix;
229
+
230
+ b. FRONT MATTER MODEL - rewritten to use new class Parameter
231
+ Entity %front-back.class; and to use %list.class; rather
232
+ than just <def-list>. This widens the model of Front Matter
233
+ by adding <list>.
234
+
235
+ 5. REMODULARIZATION - The entire Archiving and Interchange DTD
236
+ Suite was remodularized. Replaced the previous single Archiving
237
+ customization module (archivecustomize.ent) with the
238
+ following single-function customization modules:
239
+ - archivecustom-modules.ent (DTD-specific module naming)
240
+ - archivecustom-classes.ent (DTD-specific classes over-rides)
241
+ - default.classes (Default classes declarations)
242
+ - archivecustom-mixes.ent (DTD-specific mixes over-rides)
243
+ - default-mixes (Default mixes declarations)
244
+ - archivecustom-models.ent (DTD-specific content model
245
+ over-rides to the base Suite)
246
+ There are two types of such over-rides. One that
247
+ replaces a complete content model (which are named with a
248
+ suffix "-model") and those that are OR groups of
249
+ elements, intended to be mixed with #PCDATA inside
250
+ a particular model (which are named with an "-elements"
251
+ suffix).
252
+
253
+ 4. VERSION 2.0 - Updated public identifier to "v2.1 20050630" on
254
+ this module and the module-of-modules module and changed the
255
+ "dtd-version" fixed attribute to reference latest version
256
+ of DTD (version "2.0").
257
+
258
+ =============================================================
259
+ Version 1.1 (TRG) v1.1 (2003-11-01)
260
+
261
+ 3. Updated public identifier to "v1.1 20031101"
262
+
263
+ 2. Changed Parameter Entity %dtd-version; to reference latest
264
+ version of DTD (version 1.1)
265
+
266
+ 1. Updated public identifiers for modules.ent and
267
+ archivecustomize.ent to reflect modules' modification.
268
+ Rationale: To call updated modules.
269
+ -->
270
+
271
+
272
+ <!-- ============================================================= -->
273
+ <!-- DESIGN CONSIDERATIONS -->
274
+ <!-- ============================================================= -->
275
+
276
+
277
+ <!-- MODULAR DTD LIBRARY
278
+ A set of journal archiving and interchange
279
+ DTD modules was written as the basis for
280
+ publishing, interchange, and repository
281
+ DTDs, with the intention that DTDs for
282
+ specific purposes, such as this Journal
283
+ Archiving and Interchange DTD, would be
284
+ developed based on them.
285
+
286
+ This archiving DTD has been designed to
287
+ be descriptive, open, and inclusive to
288
+ allow journal articles to be translated into
289
+ this format as conveniently as possible
290
+ from a wide variety of proprietary journal
291
+ article DTDs (such as Blackwell, Keton, and
292
+ Ovid).
293
+
294
+ This Archiving DTD has been developed from
295
+ the Archiving and Interchange DTD Suite
296
+ modules, in the approved manner, making
297
+ changes to the declarations in those modules
298
+ by over-riding Parameter Entity contents
299
+ by redefining the entities in the
300
+ %archivecustomize.ent;
301
+ module, which is called from this DTD file.
302
+ No changes to any of the original Archiving
303
+ and Interchange Suite modules are required
304
+ in order to use this DTD. -->
305
+
306
+
307
+ <!-- ============================================================= -->
308
+ <!-- VERSION 1.0 DESIGN CONSIDERATIONS -->
309
+ <!-- ============================================================= -->
310
+
311
+
312
+ <!-- THE MANY ROADS NOT TAKEN
313
+ In the interest of getting a version of this
314
+ DTD into production as quickly as practical,
315
+ several structures and functions that might
316
+ be appropriately included have been delayed
317
+ until a future version of this DTD. Such
318
+ components include:
319
+ - Questions and Answers (These may be
320
+ modeled with the current DTDs by using
321
+ paragraphs and lists)
322
+ - Continuing Medical Education material
323
+ (which frequently contains questions
324
+ and answers)
325
+ - Forms and fill-in-the-blank
326
+ - Conflict of Interest statements and
327
+ Financial Disclosure (May be modeled
328
+ as paragraphs or footnotes)
329
+ - Electronic and Digital Rights Management
330
+ - Advertising included in the journal:
331
+ + Job ads
332
+ + Classified advertising
333
+ + Display advertising
334
+ - Calendars, meeting schedules, and
335
+ announcements. (These can be handled
336
+ as ordinary articles or sections within
337
+ articles)
338
+ - About the Journal material such as Author
339
+ Guidelines, Policy and Scope statements,
340
+ Editorial or advisory boards, detailed
341
+ indicia, etc.
342
+ -->
343
+
344
+
345
+ <!-- ============================================================= -->
346
+ <!-- MODULES OF MODULES INVOKED -->
347
+ <!-- ============================================================= -->
348
+
349
+
350
+ <!-- MODULE TO NAME DTD-SPECIFIC MODULES -->
351
+ <!-- Names all DTD-specific external modules -->
352
+ <!ENTITY % archivecustom-modules.ent PUBLIC
353
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD-Specific Modules v2.2.0 20090301//EN"
354
+ "archivecustom-modules.ent" >
355
+ %archivecustom-modules.ent;
356
+
357
+
358
+ <!-- MODULE TO NAME THE MODULES -->
359
+ <!-- Declares all the external modules that are
360
+ part of the modular Journal Archiving and
361
+ Interchange DTD Suite library. Thus it does
362
+ NOT declare itself; the DTD-specific
363
+ module-of-modules; any DTD-specific class,
364
+ mix, or model over-ride modules; or any new
365
+ new content modules specific to this DTD.
366
+ Those are declared in the DTD-specific
367
+ module of modules.
368
+ Since this module declares but does not
369
+ invoke modules, this DTD then invokes any
370
+ modules it uses by referencing the external
371
+ Parameter Entities defined in the Module of
372
+ Modules. To include a set of elements (such
373
+ as all the lists or the MathML elements) this
374
+ module defines the external Parameter Entity
375
+ for the module(s) that contains the MathML
376
+ declarations and the DTD references that
377
+ entity. -->
378
+ <!ENTITY % modules.ent PUBLIC
379
+ "-//Atypon//DTD Atypon Systems Archival NLM DTD Suite Module of Modules v2.2.0 20090301//EN"
380
+ "modules.ent" >
381
+ %modules.ent;
382
+
383
+
384
+ <!-- ============================================================= -->
385
+ <!-- CUSTOMIZATION MODULES INVOKED -->
386
+ <!-- Note: These modules must be called after -->
387
+ <!-- all Module of Modules but before any other -->
388
+ <!-- modules. Unlike any other grouping, order -->
389
+ <!-- of these modules matters. -->
390
+ <!-- ============================================================= -->
391
+
392
+
393
+ <!-- DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE -->
394
+ <!-- Names the module that holds the DTD-specific
395
+ class definitions for the Journal Archiving
396
+ and Interchange DTD that over-rides the Suite
397
+ defaults.
398
+ (Defined in %archivecustom-modules.ent;) -->
399
+ %archivecustom-classes.ent;
400
+
401
+
402
+ <!-- DEFAULT ELEMENT CLASSES MODULE -->
403
+ <!-- Names the module that holds the standard
404
+ class definitions for the Journal Archiving
405
+ and Interchange DTD Suite. -->
406
+ %default-classes.ent;
407
+
408
+
409
+ <!-- DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE -->
410
+ <!-- Set up the Parameter Entities and element
411
+ class definitions that will be used to
412
+ over-ride some element mixes in this DTD.
413
+ (Defined in %archivecustom-modules.ent;) -->
414
+ %archivecustom-mixes.ent;
415
+
416
+
417
+ <!-- DEFAULT MIX CUSTOMIZATIONS MODULE -->
418
+ <!-- Names the module that holds the standard
419
+ mix definitions for the Journal Archiving
420
+ and Interchange DTD Suite. -->
421
+ %default-mixes.ent;
422
+
423
+
424
+ <!-- DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
425
+ MODULE -->
426
+ <!-- Names the module that holds the over-rides
427
+ of content models, attribute lists, elements
428
+ lists to be used in content models, and
429
+ attribute values. These are DTD-specific.
430
+ (Defined in %archivecustom-modules.ent;) -->
431
+ %archivecustom-models.ent;
432
+
433
+
434
+ <!-- ============================================================= -->
435
+ <!-- COMMON (SHARED) ELEMENTS MODULE INVOKED -->
436
+ <!-- ============================================================= -->
437
+
438
+
439
+ <!-- COMMON (SHARED) DECLARATIONS -->
440
+ <!-- Declarations for elements, attributes,
441
+ entities, and Notations that are shared by
442
+ more than one class module. Note: Must be
443
+ called before any of the class modules. -->
444
+
445
+ %common.ent;
446
+
447
+
448
+ <!-- ============================================================= -->
449
+ <!-- JOURNAL ARTICLE CLASS ELEMENTS (alpha) -->
450
+ <!-- ============================================================= -->
451
+
452
+ <!-- ARTICLE METADATA ELEMENTS -->
453
+ %articlemeta.ent;
454
+
455
+
456
+ <!-- BACK MATTER ELEMENTS -->
457
+ %backmatter.ent;
458
+
459
+
460
+ <!-- DISPLAY (GRAPHICAL) ELEMENTS -->
461
+ %display.ent;
462
+
463
+
464
+ <!-- FORMATTING ELEMENT CLASSES -->
465
+ <!-- Elements that change rendition/display. -->
466
+ %format.ent;
467
+
468
+
469
+ <!-- JOURNAL METADATA ELEMENTS -->
470
+ %journalmeta.ent;
471
+
472
+
473
+ <!-- LINK CLASS ELEMENTS -->
474
+ %link.ent;
475
+
476
+
477
+ <!-- LIST CLASS ELEMENTS -->
478
+ %list.ent;
479
+
480
+
481
+ <!-- MATH ELEMENTS -->
482
+ %math.ent;
483
+
484
+
485
+ <!-- PARAGRAPH-LEVEL ELEMENTS -->
486
+ %para.ent;
487
+
488
+
489
+ <!-- PHRASE-LEVEL ELEMENTS -->
490
+ %phrase.ent;
491
+
492
+
493
+ <!-- BIBLIOGRAPHIC REFERENCE (CITATION)
494
+ CLASS ELEMENTS -->
495
+ %references.ent;
496
+
497
+
498
+ <!-- SECTION ELEMENTS -->
499
+ %section.ent;
500
+
501
+ <!-- ANNOTATION ELEMENTS -->
502
+ %annotation.ent;
503
+
504
+
505
+ <!-- ============================================================= -->
506
+ <!-- THE REST OF THE EXTERNAL MODULES INVOKED -->
507
+ <!-- ============================================================= -->
508
+
509
+
510
+ <!-- MATHML SETUP MODULE -->
511
+ <!-- Invoke the MathML modules -->
512
+ %mathmlsetup.ent;
513
+
514
+
515
+
516
+ <!-- XHTML TABLE SETUP MODULE -->
517
+ <!-- Set up the necessary Parameter Entity values
518
+ and then invoke XHTML (HTML 4.0) table
519
+ module -->
520
+ %XHTMLtablesetup.ent;
521
+
522
+ <!-- OASIS XML TABLE SETUP MODULE -->
523
+ <!-- Set all Parameter Entities needed by the
524
+ OASIS (CALS) Table Exchange table model, and
525
+ then call the module containing that model.-->
526
+ %oasis-tablesetup.ent;
527
+
528
+ <!-- SPECIAL CHARACTERS DECLARATIONS -->
529
+ <!-- Standard XML special character entities
530
+ used in this DTD -->
531
+ %xmlspecchars.ent;
532
+
533
+
534
+ <!-- CUSTOM SPECIAL CHARACTERS DECLARATIONS -->
535
+ <!-- Custom special character entities created
536
+ specifically for use in this DTD Suite -->
537
+ %chars.ent;
538
+
539
+
540
+ <!-- NOTATION DECLARATIONS MODULE -->
541
+ %notat.ent;
542
+
543
+
544
+ <!-- ============================================================= -->
545
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE LISTS -->
546
+ <!-- ============================================================= -->
547
+
548
+
549
+ <!-- DTD VERSION -->
550
+ <!-- What version of this DTD was used to make
551
+ the document instance under consideration.
552
+ Note that this is a fixed value that should
553
+ change every time the DTD changes versions or
554
+ revisions. -->
555
+ <!ENTITY % dtd-version
556
+ "dtd-version
557
+ CDATA #FIXED '2.2'" >
558
+
559
+
560
+
561
+ <!-- ARTICLE ATTRIBUTES -->
562
+ <!-- Attributes for the top-level element
563
+ <article> -->
564
+ <!ENTITY % article-atts
565
+ "article-type
566
+ CDATA #IMPLIED
567
+ %dtd-version;
568
+ xml:lang NMTOKEN 'EN'
569
+ %XLINK.xmlns.attrib;
570
+ %MATHML.xmlns.attrib;
571
+ %Schema.xmlns.attrib;" >
572
+
573
+
574
+ <!-- SUB-ARTICLE ATTRIBUTES -->
575
+ <!-- Attributes for the <sub-article> element -->
576
+ <!ENTITY % sub-article-atts
577
+ "article-type
578
+ CDATA #IMPLIED
579
+ id ID #IMPLIED
580
+ xml:lang NMTOKEN 'EN'" >
581
+
582
+
583
+ <!-- RESPONSE ATTRIBUTES -->
584
+ <!-- Attributes for the <response> element -->
585
+ <!ENTITY % response-atts
586
+ "response-type
587
+ CDATA #IMPLIED
588
+ id ID #IMPLIED
589
+ xml:lang NMTOKEN 'EN'" >
590
+
591
+
592
+ <!-- ============================================================= -->
593
+ <!-- JOURNAL ARTICLE ELEMENTS -->
594
+ <!-- ============================================================= -->
595
+
596
+
597
+ <!-- ARTICLE MODEL (LIMITED) -->
598
+ <!ENTITY % article-short-model
599
+ "((front | front-stub), body?, back?)" >
600
+
601
+
602
+ <!-- ARTICLE MODEL WITH SUBARTICLE OR RESPONSE -->
603
+ <!ENTITY % article-full-model
604
+ "(front, body?, back?,
605
+ (sub-article* | response*) )" >
606
+
607
+
608
+ <!-- ARTICLE -->
609
+ <!-- The complete content of a journal article.
610
+ An article is potentially divided into
611
+ four (more typically three) parts: 1) the
612
+ Front Matter (article metadata or header),
613
+ the body of the article (main content), any
614
+ ancillary information such as a glossary or
615
+ appendix, and (the least common) a
616
+ response, that is a commentary on the
617
+ article itself. -->
618
+ <!ELEMENT article %article-full-model; >
619
+ <!-- article-type
620
+ What kind of article is this?
621
+ Note: When the article is a commentary on
622
+ another article, for example a correction or
623
+ addendum, this attribute is metadata for the
624
+ commentary itself, it does NOT define the
625
+ kind of article that is being corrected or
626
+ amended.
627
+ This is an optional CDATA attribute, but
628
+ an article type should be identified if
629
+ possible. Potential values include:
630
+ abstract The article itself is an
631
+ abstract (of a paper or
632
+ presentation), usually that
633
+ has been presented or published
634
+ separately.
635
+ addendum A published item that adds
636
+ additional information or
637
+ clarification to another item
638
+ Similar value "correction"
639
+ corrects an error in previously
640
+ published material
641
+ announcement
642
+ Material announced in the
643
+ publication (may or may not be
644
+ directly related to the pub)
645
+ article-commentary
646
+ An item whose subject or focus
647
+ is another article or articles;
648
+ this article comments on the
649
+ other article(s) (For example,
650
+ for a controversial article, the
651
+ editors of the publication
652
+ might invite an author of the
653
+ opposing opinion to comment on
654
+ the first article, and publish
655
+ the two together.)
656
+ book-review
657
+ Review or analysis of one or more
658
+ printed or online books (Note
659
+ that product reviews are a
660
+ separate type.)
661
+ books-received
662
+ Notification of items such as
663
+ books that have been received
664
+ by the publication for review
665
+ or other consideration
666
+ brief-report
667
+ A short and/or rapid announcement
668
+ of research results
669
+ calendar A list of events
670
+ case-report
671
+ Case study, case report, or other
672
+ description of a case
673
+ collection This value should only be used
674
+ to describe articles whose
675
+ intellectual content appears
676
+ primarily in the <sub-article>
677
+ or <response> elements.
678
+ correction A modification, or
679
+ correction of previously
680
+ published material (sometimes
681
+ called "errata") Similar value
682
+ "addendum" merely adds to
683
+ previously published material
684
+ dissertation
685
+ Thesis or dissertation written
686
+ as part of the completion of
687
+ a degree of study
688
+ discussion Invited discussion related to a
689
+ specific article or issue
690
+ editorial Opinion piece, policy statement,
691
+ or general commentary, typically
692
+ written by staff of the
693
+ publication. Note: similar value
694
+ "article-commentary" is reserved
695
+ for a commentary on a specific
696
+ article or articles.
697
+ in-brief Summary of items in the current
698
+ issue
699
+ introduction
700
+ An introduction to the
701
+ publication, a series of articles
702
+ within the publication, etc.,
703
+ typically for a special section
704
+ or issue
705
+ letter Letter to the publication,
706
+ typically commenting upon a
707
+ published item
708
+ meeting-report
709
+ Report of a conference,
710
+ symposium, or meeting
711
+ news News item
712
+ obituary Announcement of a death or
713
+ appreciation of a colleague
714
+ who has recently died
715
+ oration Reprint of a speech or oral
716
+ presentation
717
+ other Not any of the article types
718
+ explicitly named in this list
719
+ partial-retraction
720
+ Partial retraction of
721
+ previously published material
722
+ product-review
723
+ Description, analysis, or review
724
+ of a product or service, for
725
+ example a software package (note
726
+ that book review is a separate
727
+ type)
728
+ rapid-communication
729
+ Fast-breaking research update
730
+ or other news item
731
+ reply Reply to a letter or commentary,
732
+ typically by the original
733
+ author commenting upon the
734
+ comments
735
+ reprint Reprint of a previously
736
+ published article
737
+ research-article
738
+ Research article
739
+ retraction Retraction of previously
740
+ published material
741
+ review-article
742
+ Review or state-of-the-art
743
+ summary article
744
+ translation Translation of an article
745
+ originally produced in a
746
+ different language
747
+ dtd-version
748
+ Which version of the DTD does this article
749
+ use? The value is a #FIXED attribute, so
750
+ the entire attribute definition is defined
751
+ in a Parameter Entity, so the next version
752
+ of the DTD can use a different #FIXED value.
753
+ xml:lang The language in which the value of the
754
+ element is expressed. Recommended best
755
+ practice is to use values as defined in
756
+ RFC 1766, typically 2-letter language
757
+ codes such as "FR" (French), "EN" (English),
758
+ and "DE" (German). These values are NOT
759
+ case sensitive, so "EN" = "en". The values
760
+ may include hyphenated differentiations such
761
+ as "EN-AU" (Australian English) and "EN-US"
762
+ (United States English).
763
+ Processing and Conversion Note: All other
764
+ xml:lang attributes within the article
765
+ inherit the value set on <article> unless
766
+ explicitly set themselves with their own
767
+ "xml:lang" attribute.
768
+ xmlns Set up the pseudo-attributes for the
769
+ namespaces for any namespaces used in this
770
+ DTD. XLink and MathML are set up in the
771
+ MathML modules. These xmlns are called
772
+ here because certain older tools will not
773
+ work properly with namespaces unless they
774
+ are declared on the top level element.
775
+ The PEs are defined in the MathML modules. -->
776
+ <!ATTLIST article
777
+ %article-atts; >
778
+
779
+
780
+ <!-- ============================================================= -->
781
+ <!-- FRONT MATTER ELEMENTS -->
782
+ <!-- ============================================================= -->
783
+
784
+
785
+ <!-- FRONT MATTER MODEL -->
786
+ <!ENTITY % front-model "(journal-meta?, article-meta,
787
+ (%list.class; | %front.class; |
788
+ %front-back.class;)* )" >
789
+
790
+
791
+ <!-- FRONT MATTER -->
792
+ <!-- The metadata concerning an article, such as
793
+ the name and issue of the journal in which it
794
+ appears and the name and author(s) of the
795
+ article.
796
+ In some journal DTDs this is called the
797
+ header information, and it includes metadata
798
+ concerning the journal <journal-meta> and
799
+ metadata concerning the issue of the journal
800
+ and the individual article <article-meta>. -->
801
+ <!ELEMENT front %front-model; >
802
+
803
+
804
+ <!-- ============================================================= -->
805
+ <!-- BODY ELEMENTS -->
806
+ <!-- ============================================================= -->
807
+
808
+
809
+ <!-- BODY MODEL -->
810
+ <!-- Content model for the Body (main textual
811
+ content) of a journal article. -->
812
+ <!ENTITY % body-model "((%para-level;)*, (%sec-level;)*,
813
+ sig-block?)" >
814
+
815
+
816
+ <!-- BODY OF THE ARTICLE -->
817
+ <!-- The main textual portion of the article that
818
+ conveys the content. -->
819
+ <!ELEMENT body %body-model; >
820
+
821
+
822
+ <!-- ============================================================= -->
823
+ <!-- BACK MATTER ELEMENTS -->
824
+ <!-- ============================================================= -->
825
+
826
+
827
+ <!-- BACK MATTER MODEL -->
828
+ <!-- Content model for the Back Matter (ancillary
829
+ material such as appendices) of a journal
830
+ article. -->
831
+ <!ENTITY % back-model "(title*, (%doc-back-matter-mix;)* )" >
832
+
833
+
834
+ <!-- BACK MATTER -->
835
+ <!-- Ancillary or supporting material not included
836
+ as part of the main textual content of a
837
+ journal article, for example appendices and
838
+ acknowledgments. -->
839
+ <!ELEMENT back %back-model; >
840
+
841
+
842
+ <!-- ============================================================= -->
843
+ <!-- SUBARTICLE -->
844
+ <!-- ============================================================= -->
845
+
846
+
847
+ <!-- SUBARTICLE MODEL -->
848
+ <!-- Content model for the <sub-article> element
849
+ -->
850
+ <!ENTITY % sub-article-model
851
+ "( (front | front-stub), body?, back?,
852
+ (sub-article* | response*) )" >
853
+
854
+
855
+ <!-- SUBARTICLE -->
856
+ <!-- An article that is completely contained
857
+ inside another article. Both the article and
858
+ the subarticle have their own metadata. The
859
+ article has at very least journal and issue
860
+ information and start and end pages; it may
861
+ have a title, author, or other metadata.
862
+ The subarticle has its own, independent
863
+ metadata, such as authors, that it
864
+ may not share with the article that
865
+ encloses it.
866
+ Conversion Note: "Superarticles" that contain
867
+ other articles rarely contain much content of
868
+ their own, perhaps just a title and
869
+ introductory paragraph.
870
+ Authoring Note: This construction is NOT to
871
+ be used for an article and its response, or
872
+ for a series of responses, even if the
873
+ original article to which the responses are
874
+ replying is elsewhere. -->
875
+ <!ELEMENT sub-article %sub-article-model; >
876
+ <!-- article-type
877
+ What kind of article is this?
878
+ Note: When the article is a commentary on
879
+ another article, for example a correction or
880
+ addendum, this attribute is metadata for the
881
+ commentary itself, it does NOT define the
882
+ kind of article that is being corrected or
883
+ amended.
884
+ Authoring Note: All articles
885
+ should have types assigned if possible.
886
+ abstract The article itself is an
887
+ abstract (of a paper or
888
+ presentation), usually that
889
+ has been presented or published
890
+ separately.
891
+ addendum A published item that adds
892
+ additional information or
893
+ clarification to another item
894
+ Similar value "correction"
895
+ corrects an error in previously
896
+ published material
897
+ announcement
898
+ Material announced in the
899
+ publication (may or may not be
900
+ directly related to the pub)
901
+ article-commentary
902
+ An item whose subject or focus
903
+ is another article or articles;
904
+ this article comments on the
905
+ other article(s) (For example,
906
+ for a controversial article, the
907
+ editors of the publication
908
+ might invite an author of the
909
+ opposing opinion to comment on
910
+ the first article, and publish
911
+ the two together.)
912
+ book-review
913
+ Review or analysis of one or more
914
+ printed or online books (Note
915
+ that product reviews are a
916
+ separate type.)
917
+ books-received
918
+ Notification of items such as
919
+ books that have been received
920
+ by the publication for review
921
+ or other consideration
922
+ brief-report
923
+ A short and/or rapid announcement
924
+ of research results
925
+ calendar A list of events
926
+ case-report
927
+ Case study, case report, or other
928
+ description of a case
929
+ collection This value should only be used
930
+ to describe articles whose
931
+ intellectual content appears
932
+ primarily in the <sub-article>
933
+ correction A modification, or
934
+ correction of previously
935
+ published material (sometimes
936
+ called "errata") Similar value
937
+ "addendum" merely adds to
938
+ previously published material
939
+ discussion Invited discussion related to a
940
+ specific article or issue
941
+ dissertation
942
+ Thesis or dissertation written
943
+ as part of the completion of
944
+ a degree of study
945
+ editorial Opinion piece, policy statement,
946
+ or general commentary, typically
947
+ written by staff of the
948
+ publication. Note: similar value
949
+ "article-commentary" is reserved
950
+ for a commentary on a specific
951
+ article or articles.
952
+ in-brief Summary of items in the current
953
+ issue
954
+ introduction
955
+ An introduction to the
956
+ publication, a series of articles
957
+ within the publication, etc.,
958
+ typically for a special section
959
+ or issue
960
+ letter Letter to the publication,
961
+ typically commenting upon a
962
+ published item
963
+ meeting-report
964
+ Report of a conference,
965
+ symposium, or meeting
966
+ news News item
967
+ obituary Announcement of a death or
968
+ appreciation of a colleague
969
+ who has recently died
970
+ oration Reprint of a speech or oral
971
+ presentation
972
+ other Not any of the article types
973
+ explicitly named in this list
974
+ partial-retraction
975
+ Partial retraction of
976
+ previously published material
977
+ product-review
978
+ Description, analysis, or review
979
+ of a product or service, for
980
+ example a software package (note
981
+ that book review is a separate
982
+ type)
983
+ rapid-communication
984
+ Fast-breaking research update
985
+ or other news item
986
+ reply Reply to a letter or commentary,
987
+ typically by the original
988
+ author commenting upon the
989
+ comments
990
+ reprint Reprint of a previously
991
+ published article
992
+ research-article
993
+ Research article
994
+ retraction Retraction of previously
995
+ published material
996
+ review-article
997
+ Review or state-of-the-art
998
+ summary article
999
+ translation Translation of an article
1000
+ originally produced in a
1001
+ different language
1002
+ id Unique identifier so the element may be
1003
+ referenced
1004
+ xml:lang The language in which the value of the
1005
+ element is expressed. Recommended best
1006
+ practice is to use values as defined in
1007
+ RFC 1766, typically 2-letter language
1008
+ codes such as "FR" (French), "EN" (English),
1009
+ and "DE" (German). These values are NOT
1010
+ case sensitive, so "EN" = "en". The values
1011
+ may include hyphenated differentiations such
1012
+ as "EN-AU" (Australian English) and "EN-US"
1013
+ (United States English).
1014
+ Processing and Conversion Note: All other
1015
+ xml:lang attributes within the article
1016
+ inherit the value set on <article> unless
1017
+ explicitly set themselves with their own
1018
+ "xml:lang" attribute. -->
1019
+ <!ATTLIST sub-article
1020
+ %sub-article-atts; >
1021
+
1022
+
1023
+ <!-- FRONT MODEL STUB -->
1024
+ <!-- Content model for the <front-stub> element,
1025
+ a reduced metadata set for use in
1026
+ sub-articles and responses, which will
1027
+ inherit metadata not defined in the stub
1028
+ from the enclosing article -->
1029
+ <!ENTITY % front-stub-model
1030
+ "(article-id*, title-group?,
1031
+ (contrib-group | aff | %x.class;)*,
1032
+ author-notes?,
1033
+ ( (fpage, lpage?, page-range?) |
1034
+ elocation-id)?,
1035
+ history?, permissions?, abstract*)" >
1036
+
1037
+
1038
+ <!-- STUB FRONT METADATA -->
1039
+ <!-- A reduced metadata set for use in
1040
+ sub-articles and responses, which will
1041
+ inherit metadata not defined in the stub
1042
+ from the enclosing article -->
1043
+ <!ELEMENT front-stub %front-stub-model; >
1044
+
1045
+
1046
+ <!-- ============================================================= -->
1047
+ <!-- RESPONSE ELEMENTS -->
1048
+ <!-- ============================================================= -->
1049
+
1050
+
1051
+ <!-- RESPONSE -->
1052
+ <!-- Reply, response, or commentary concerning the
1053
+ journal article. In the typical case, the
1054
+ response is included in the same XML package
1055
+ as the original article, and thus attached
1056
+ at the end of the article proper.
1057
+ Authoring Note: Frequently a reply or
1058
+ response is an article in its own right, not
1059
+ included as part of the original article.
1060
+ Such an article could use the
1061
+ <related-article> element in the article
1062
+ metadata to record the metadata for the
1063
+ original article.
1064
+ Conversion Note: This construction can also
1065
+ be used for the pathological case, rarely
1066
+ seen, in which several responses to an
1067
+ article are lumped together into a single
1068
+ container which is not the original article,
1069
+ merely a collection of responses. In one
1070
+ example we examined, the first two responses
1071
+ were to an original article which was else-
1072
+ where and the third response was a response
1073
+ to the first two responses. -->
1074
+ <!ELEMENT response %article-short-model; >
1075
+ <!-- response-type
1076
+ What kind of response is this?
1077
+ Note: This does NOT define the kind of
1078
+ article on which the response is commenting,
1079
+ it is metadata for the response itself.
1080
+ Suggested values include:
1081
+ addendum Adds additional information or
1082
+ clarification to the parent
1083
+ article
1084
+ discussion Discussion related to a specific
1085
+ issue described in the parent
1086
+ article
1087
+ reply Reply to the parent article.
1088
+ This is the most commonly used
1089
+ value.
1090
+ Authoring Note: This attribute was added to
1091
+ describe cases in which a series of articles
1092
+ is chained together: typically as an
1093
+ introduction to the article, an article, then
1094
+ several responses to the article.
1095
+ id Unique identifier so the element may be
1096
+ referenced
1097
+ xml:lang The language in which the value of the
1098
+ element is expressed. Recommended best
1099
+ practice is to use values as defined in
1100
+ RFC 1766, typically 2-letter language
1101
+ codes such as "FR" (French), "EN" (English),
1102
+ and "DE" (German). These values are NOT
1103
+ case sensitive, so "EN" = "en". The values
1104
+ may include hyphenated differentiations such
1105
+ as "EN-AU" (Australian English) and "EN-US"
1106
+ (United States English).
1107
+ Processing and Conversion Note: All other
1108
+ xml:lang attributes within the article
1109
+ inherit the value set on <article> unless
1110
+ explicitly set themselves with their own
1111
+ "xml:lang" attribute. -->
1112
+ <!ATTLIST response
1113
+ %response-atts; >
1114
+
1115
+
1116
+ <!-- ================== End Journal Archiving and Interchange DTD -->