xml_jats_resolver 0.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1312) hide show
  1. checksums.yaml +7 -0
  2. data/.travis.yml +6 -0
  3. data/CHANGELOG.md +3 -0
  4. data/Gemfile +8 -0
  5. data/LICENSE.md +25 -0
  6. data/README.md +3 -0
  7. data/Rakefile +10 -0
  8. data/lib/dtd/archiving_dtd/1.0/dtd/XHTMLtablesetup.ent +247 -0
  9. data/lib/dtd/archiving_dtd/1.0/dtd/archivearticle.dtd +815 -0
  10. data/lib/dtd/archiving_dtd/1.0/dtd/archivecustomize.ent +583 -0
  11. data/lib/dtd/archiving_dtd/1.0/dtd/articlemeta.ent +1431 -0
  12. data/lib/dtd/archiving_dtd/1.0/dtd/backmatter.ent +216 -0
  13. data/lib/dtd/archiving_dtd/1.0/dtd/catalog.ent +76 -0
  14. data/lib/dtd/archiving_dtd/1.0/dtd/chars.ent +333 -0
  15. data/lib/dtd/archiving_dtd/1.0/dtd/checksum.md5 +83 -0
  16. data/lib/dtd/archiving_dtd/1.0/dtd/common.ent +1609 -0
  17. data/lib/dtd/archiving_dtd/1.0/dtd/display.ent +988 -0
  18. data/lib/dtd/archiving_dtd/1.0/dtd/format.ent +403 -0
  19. data/lib/dtd/archiving_dtd/1.0/dtd/htmltable.dtd +334 -0
  20. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsa.ent +173 -0
  21. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsb.ent +146 -0
  22. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsc.ent +49 -0
  23. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsn.ent +117 -0
  24. data/lib/dtd/archiving_dtd/1.0/dtd/isoamso.ent +77 -0
  25. data/lib/dtd/archiving_dtd/1.0/dtd/isoamsr.ent +205 -0
  26. data/lib/dtd/archiving_dtd/1.0/dtd/isobox.ent +67 -0
  27. data/lib/dtd/archiving_dtd/1.0/dtd/isocyr1.ent +94 -0
  28. data/lib/dtd/archiving_dtd/1.0/dtd/isocyr2.ent +53 -0
  29. data/lib/dtd/archiving_dtd/1.0/dtd/isodia.ent +41 -0
  30. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk1.ent +1 -1
  31. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk2.ent +1 -1
  32. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk3.ent +70 -0
  33. data/lib/dtd/archiving_dtd/1.0/dtd/isogrk4.ent +1 -1
  34. data/lib/dtd/archiving_dtd/1.0/dtd/isolat1.ent +89 -0
  35. data/lib/dtd/archiving_dtd/1.0/dtd/isolat2.ent +148 -0
  36. data/lib/dtd/archiving_dtd/1.0/dtd/isomfrk.ent +79 -0
  37. data/lib/dtd/archiving_dtd/1.0/dtd/isomopf.ent +53 -0
  38. data/lib/dtd/archiving_dtd/1.0/dtd/isomscr.ent +79 -0
  39. data/lib/dtd/archiving_dtd/1.0/dtd/isonum.ent +103 -0
  40. data/lib/dtd/archiving_dtd/1.0/dtd/isopub.ent +110 -0
  41. data/lib/dtd/archiving_dtd/1.0/dtd/isotech.ent +183 -0
  42. data/lib/dtd/archiving_dtd/1.0/dtd/journalmeta.ent +269 -0
  43. data/lib/dtd/archiving_dtd/1.0/dtd/link.ent +417 -0
  44. data/lib/dtd/archiving_dtd/1.0/dtd/list.ent +361 -0
  45. data/lib/dtd/archiving_dtd/1.0/dtd/math.ent +220 -0
  46. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mathml2-qname-1.mod +275 -0
  47. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mmlalias.ent +564 -0
  48. data/lib/dtd/archiving_dtd/1.0/dtd/mathml/mmlextra.ent +128 -0
  49. data/lib/dtd/archiving_dtd/1.0/dtd/mathml2-qname-1.mod +275 -0
  50. data/lib/dtd/archiving_dtd/1.0/dtd/mathml2.dtd +1960 -0
  51. data/lib/dtd/archiving_dtd/1.0/dtd/mathmlsetup.ent +141 -0
  52. data/lib/dtd/archiving_dtd/1.0/dtd/mmlalias.ent +564 -0
  53. data/lib/dtd/archiving_dtd/1.0/dtd/mmlextra.ent +128 -0
  54. data/lib/dtd/archiving_dtd/1.0/dtd/modules.ent +344 -0
  55. data/lib/dtd/archiving_dtd/1.0/dtd/notat.ent +147 -0
  56. data/lib/dtd/archiving_dtd/1.0/dtd/oasis-exchange.ent +354 -0
  57. data/lib/dtd/archiving_dtd/1.0/dtd/oasis-tablesetup.ent +258 -0
  58. data/lib/dtd/archiving_dtd/1.0/dtd/para.ent +320 -0
  59. data/lib/dtd/archiving_dtd/1.0/dtd/phrase.ent +213 -0
  60. data/lib/dtd/archiving_dtd/1.0/dtd/readme.txt +247 -0
  61. data/lib/dtd/archiving_dtd/1.0/dtd/references.ent +559 -0
  62. data/lib/dtd/archiving_dtd/1.0/dtd/sampleminimal.xml +5 -0
  63. data/lib/dtd/archiving_dtd/1.0/dtd/samplesmall.xml +84 -0
  64. data/lib/dtd/archiving_dtd/1.0/dtd/section.ent +205 -0
  65. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsa.ent +173 -0
  66. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsb.ent +146 -0
  67. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsc.ent +49 -0
  68. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsn.ent +117 -0
  69. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamso.ent +77 -0
  70. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isoamsr.ent +205 -0
  71. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isobox.ent +67 -0
  72. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isocyr1.ent +94 -0
  73. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isocyr2.ent +53 -0
  74. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isodia.ent +41 -0
  75. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk1.ent +1 -1
  76. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk2.ent +1 -1
  77. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk3.ent +70 -0
  78. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isogrk4.ent +1 -1
  79. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isolat1.ent +89 -0
  80. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isolat2.ent +148 -0
  81. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomfrk.ent +79 -0
  82. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomopf.ent +53 -0
  83. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isomscr.ent +79 -0
  84. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isonum.ent +103 -0
  85. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isopub.ent +110 -0
  86. data/lib/dtd/archiving_dtd/1.0/dtd/xmlchars/isotech.ent +183 -0
  87. data/lib/dtd/archiving_dtd/1.0/dtd/xmlspecchars.ent +274 -0
  88. data/lib/dtd/archiving_dtd/1.1/dtd/XHTMLtablesetup.ent +289 -0
  89. data/lib/dtd/archiving_dtd/1.1/dtd/archivearticle.dtd +819 -0
  90. data/lib/dtd/archiving_dtd/1.1/dtd/archivecustomize.ent +597 -0
  91. data/lib/dtd/archiving_dtd/1.1/dtd/articlemeta.ent +1464 -0
  92. data/lib/dtd/archiving_dtd/1.1/dtd/backmatter.ent +216 -0
  93. data/lib/dtd/archiving_dtd/1.1/dtd/catalog.ent +76 -0
  94. data/lib/dtd/archiving_dtd/1.1/dtd/chars.ent +340 -0
  95. data/lib/dtd/archiving_dtd/1.1/dtd/common.ent +1674 -0
  96. data/lib/dtd/archiving_dtd/1.1/dtd/display.ent +1334 -0
  97. data/lib/dtd/archiving_dtd/1.1/dtd/format.ent +401 -0
  98. data/lib/dtd/archiving_dtd/1.1/dtd/htmltable.dtd +334 -0
  99. data/lib/dtd/archiving_dtd/1.1/dtd/journalmeta.ent +283 -0
  100. data/lib/dtd/archiving_dtd/1.1/dtd/link.ent +475 -0
  101. data/lib/dtd/archiving_dtd/1.1/dtd/list.ent +416 -0
  102. data/lib/dtd/archiving_dtd/1.1/dtd/math.ent +288 -0
  103. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mathml2-qname-1.mod +1 -3
  104. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mmlalias.ent +1 -1
  105. data/lib/dtd/archiving_dtd/1.1/dtd/mathml/mmlextra.ent +1 -1
  106. data/lib/dtd/archiving_dtd/1.1/dtd/mathml2.dtd +1960 -0
  107. data/lib/dtd/archiving_dtd/1.1/dtd/mathmlsetup.ent +171 -0
  108. data/lib/dtd/archiving_dtd/1.1/dtd/modules.ent +349 -0
  109. data/lib/dtd/archiving_dtd/1.1/dtd/notat.ent +147 -0
  110. data/lib/dtd/archiving_dtd/1.1/dtd/oasis-exchange.ent +354 -0
  111. data/lib/dtd/archiving_dtd/1.1/dtd/oasis-tablesetup.ent +298 -0
  112. data/lib/dtd/archiving_dtd/1.1/dtd/para.ent +368 -0
  113. data/lib/dtd/archiving_dtd/1.1/dtd/phrase.ent +244 -0
  114. data/lib/dtd/archiving_dtd/1.1/dtd/references.ent +560 -0
  115. data/lib/dtd/archiving_dtd/1.1/dtd/section.ent +202 -0
  116. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsa.ent +1 -1
  117. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsb.ent +1 -1
  118. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsc.ent +1 -1
  119. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsn.ent +1 -1
  120. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamso.ent +1 -1
  121. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isoamsr.ent +1 -1
  122. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isobox.ent +1 -1
  123. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isocyr1.ent +1 -1
  124. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isocyr2.ent +1 -1
  125. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isodia.ent +1 -1
  126. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk1.ent +1 -1
  127. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk2.ent +1 -1
  128. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk3.ent +1 -1
  129. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isogrk4.ent +1 -1
  130. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isolat1.ent +1 -1
  131. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isolat2.ent +1 -1
  132. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomfrk.ent +1 -1
  133. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomopf.ent +1 -1
  134. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isomscr.ent +1 -1
  135. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isonum.ent +1 -1
  136. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isopub.ent +1 -1
  137. data/lib/dtd/archiving_dtd/1.1/dtd/xmlchars/isotech.ent +1 -1
  138. data/lib/dtd/archiving_dtd/1.1/dtd/xmlspecchars.ent +274 -0
  139. data/lib/dtd/archiving_dtd/2.0/dtd/Readme.txt +225 -0
  140. data/lib/dtd/archiving_dtd/2.0/dtd/XHTMLtablesetup.ent +309 -0
  141. data/lib/dtd/archiving_dtd/2.0/dtd/archivearticle.dtd +952 -0
  142. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-classes.ent +157 -0
  143. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-mixes.ent +306 -0
  144. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-models.ent +756 -0
  145. data/lib/dtd/archiving_dtd/2.0/dtd/archivecustom-modules.ent +116 -0
  146. data/lib/dtd/archiving_dtd/2.0/dtd/articlemeta.ent +1811 -0
  147. data/lib/dtd/archiving_dtd/2.0/dtd/backmatter.ent +277 -0
  148. data/lib/dtd/archiving_dtd/2.0/dtd/catalog.ent +115 -0
  149. data/lib/dtd/archiving_dtd/2.0/dtd/chars.ent +359 -0
  150. data/lib/dtd/archiving_dtd/2.0/dtd/common.ent +2790 -0
  151. data/lib/dtd/archiving_dtd/2.0/dtd/default-classes.ent +704 -0
  152. data/lib/dtd/archiving_dtd/2.0/dtd/default-mixes.ent +357 -0
  153. data/lib/dtd/archiving_dtd/2.0/dtd/display.ent +1468 -0
  154. data/lib/dtd/archiving_dtd/2.0/dtd/format.ent +412 -0
  155. data/lib/dtd/archiving_dtd/2.0/dtd/htmltable.dtd +334 -0
  156. data/lib/dtd/archiving_dtd/2.0/dtd/journalmeta.ent +341 -0
  157. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-classes.ent +200 -0
  158. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-mixes.ent +207 -0
  159. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-models.ent +859 -0
  160. data/lib/dtd/archiving_dtd/2.0/dtd/journalpubcustom-modules.ent +125 -0
  161. data/lib/dtd/archiving_dtd/2.0/dtd/journalpublishing.dtd +955 -0
  162. data/lib/dtd/archiving_dtd/2.0/dtd/link.ent +510 -0
  163. data/lib/dtd/archiving_dtd/2.0/dtd/list.ent +465 -0
  164. data/lib/dtd/archiving_dtd/2.0/dtd/math.ent +329 -0
  165. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mathml2-qname-1.mod +1 -3
  166. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mmlalias.ent +1 -1
  167. data/lib/dtd/archiving_dtd/2.0/dtd/mathml/mmlextra.ent +1 -1
  168. data/lib/dtd/archiving_dtd/2.0/dtd/mathml2.dtd +1960 -0
  169. data/lib/dtd/archiving_dtd/2.0/dtd/mathmlsetup.ent +191 -0
  170. data/lib/dtd/archiving_dtd/2.0/dtd/modules.ent +417 -0
  171. data/lib/dtd/archiving_dtd/2.0/dtd/nlmcitation.ent +124 -0
  172. data/lib/dtd/archiving_dtd/2.0/dtd/notat.ent +172 -0
  173. data/lib/dtd/archiving_dtd/2.0/dtd/oasis-exchange.ent +354 -0
  174. data/lib/dtd/archiving_dtd/2.0/dtd/oasis-tablesetup.ent +308 -0
  175. data/lib/dtd/archiving_dtd/2.0/dtd/para.ent +420 -0
  176. data/lib/dtd/archiving_dtd/2.0/dtd/phrase.ent +278 -0
  177. data/lib/dtd/archiving_dtd/2.0/dtd/references.ent +726 -0
  178. data/lib/dtd/archiving_dtd/2.0/dtd/samplesmall-green.xml +1 -0
  179. data/lib/dtd/archiving_dtd/2.0/dtd/samplesmall-pub.xml +1 -0
  180. data/lib/dtd/archiving_dtd/2.0/dtd/section.ent +220 -0
  181. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsa.ent +1 -1
  182. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsb.ent +1 -1
  183. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsc.ent +1 -1
  184. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsn.ent +1 -1
  185. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamso.ent +1 -1
  186. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isoamsr.ent +1 -1
  187. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isobox.ent +1 -1
  188. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isocyr1.ent +1 -1
  189. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isocyr2.ent +1 -1
  190. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isodia.ent +1 -1
  191. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk1.ent +1 -1
  192. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk2.ent +1 -1
  193. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk3.ent +1 -1
  194. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isogrk4.ent +1 -1
  195. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isolat1.ent +1 -1
  196. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isolat2.ent +1 -1
  197. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomfrk.ent +1 -1
  198. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomopf.ent +1 -1
  199. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isomscr.ent +1 -1
  200. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isonum.ent +97 -0
  201. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isopub.ent +1 -1
  202. data/lib/dtd/archiving_dtd/2.0/dtd/xmlchars/isotech.ent +1 -1
  203. data/lib/dtd/archiving_dtd/2.0/dtd/xmlspecchars.ent +290 -0
  204. data/lib/dtd/archiving_dtd/2.1/dtd/ArchiveReadme.txt +283 -0
  205. data/lib/dtd/archiving_dtd/2.1/dtd/XHTMLtablesetup.ent +320 -0
  206. data/lib/dtd/archiving_dtd/2.1/dtd/archivearticle.dtd +981 -0
  207. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-classes.ent +173 -0
  208. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-mixes.ent +317 -0
  209. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-models.ent +777 -0
  210. data/lib/dtd/archiving_dtd/2.1/dtd/archivecustom-modules.ent +125 -0
  211. data/lib/dtd/archiving_dtd/2.1/dtd/articlemeta.ent +1816 -0
  212. data/lib/dtd/archiving_dtd/2.1/dtd/backmatter.ent +288 -0
  213. data/lib/dtd/archiving_dtd/2.1/dtd/catalog-v2.xml +577 -0
  214. data/lib/dtd/archiving_dtd/2.1/dtd/catalog.ent +179 -0
  215. data/lib/dtd/archiving_dtd/2.1/dtd/chars.ent +359 -0
  216. data/lib/dtd/archiving_dtd/2.1/dtd/common.ent +2991 -0
  217. data/lib/dtd/archiving_dtd/2.1/dtd/default-classes.ent +738 -0
  218. data/lib/dtd/archiving_dtd/2.1/dtd/default-mixes.ent +368 -0
  219. data/lib/dtd/archiving_dtd/2.1/dtd/display.ent +1480 -0
  220. data/lib/dtd/archiving_dtd/2.1/dtd/format.ent +412 -0
  221. data/lib/dtd/archiving_dtd/2.1/dtd/htmltable.dtd +334 -0
  222. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isobox.ent +61 -0
  223. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isocyr1.ent +88 -0
  224. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isocyr2.ent +47 -0
  225. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isodia.ent +35 -0
  226. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isolat1.ent +83 -0
  227. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isolat2.ent +142 -0
  228. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isonum.ent +97 -0
  229. data/lib/dtd/archiving_dtd/2.1/dtd/iso8879/isopub.ent +105 -0
  230. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsa.ent +167 -0
  231. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsb.ent +143 -0
  232. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsc.ent +43 -0
  233. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsn.ent +114 -0
  234. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamso.ent +73 -0
  235. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isoamsr.ent +204 -0
  236. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isogrk3.ent +64 -0
  237. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomfrk.ent +75 -0
  238. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomopf.ent +49 -0
  239. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isomscr.ent +75 -0
  240. data/lib/dtd/archiving_dtd/2.1/dtd/iso9573-13/isotech.ent +182 -0
  241. data/lib/dtd/archiving_dtd/2.1/dtd/journalmeta.ent +328 -0
  242. data/lib/dtd/archiving_dtd/2.1/dtd/link.ent +521 -0
  243. data/lib/dtd/archiving_dtd/2.1/dtd/list.ent +496 -0
  244. data/lib/dtd/archiving_dtd/2.1/dtd/math.ent +328 -0
  245. data/lib/dtd/archiving_dtd/2.1/dtd/mathml/mmlalias.ent +564 -0
  246. data/lib/dtd/archiving_dtd/2.1/dtd/mathml/mmlextra.ent +122 -0
  247. data/lib/dtd/archiving_dtd/2.1/dtd/mathml2-qname-1.mod +286 -0
  248. data/lib/dtd/archiving_dtd/2.1/dtd/mathml2.dtd +2206 -0
  249. data/lib/dtd/archiving_dtd/2.1/dtd/mathmlsetup.ent +280 -0
  250. data/lib/dtd/archiving_dtd/2.1/dtd/modules.ent +438 -0
  251. data/lib/dtd/archiving_dtd/2.1/dtd/notat.ent +172 -0
  252. data/lib/dtd/archiving_dtd/2.1/dtd/oasis-exchange.ent +354 -0
  253. data/lib/dtd/archiving_dtd/2.1/dtd/oasis-tablesetup.ent +308 -0
  254. data/lib/dtd/archiving_dtd/2.1/dtd/para.ent +445 -0
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  1184. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/JATS-archive-oasis-custom-modules1.ent +269 -0
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  1214. data/lib/dtd/jats/1.1/oasis_mathml2_dtd/catalog-jats-v1-1-with-base.xml +951 -0
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  1260. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-funding1.ent +547 -0
  1261. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-journalmeta1.ent +454 -0
  1262. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-link1.ent +416 -0
  1263. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-list1.ent +494 -0
  1264. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-math1.ent +402 -0
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  1267. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-modules1.ent +584 -0
  1268. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-nlmcitation1.ent +285 -0
  1269. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-notat1.ent +269 -0
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  1272. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-para1.ent +481 -0
  1273. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-phrase1.ent +502 -0
  1274. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-references1.ent +1205 -0
  1275. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-related-object1.ent +283 -0
  1276. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-section1.ent +324 -0
  1277. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/JATS-xmlspecchars1.ent +389 -0
  1278. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/catalog-jats-v1-1-no-base.xml +946 -0
  1279. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/catalog-jats-v1-1-with-base.xml +951 -0
  1280. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isobox.ent +61 -0
  1281. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/iso8879/isocyr1.ent +88 -0
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  1305. data/lib/dtd/jats/1.1/oasis_mathml3_dtd/xhtml-table-1.mod +333 -0
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  1309. data/lib/errors.rb +21 -0
  1310. data/lib/xml_jats_resolver.rb +64 -0
  1311. data/xml_jats_resolver.gemspec +24 -0
  1312. metadata +1396 -0
@@ -0,0 +1,4179 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Common (Shared) Elements Module -->
3
+ <!-- VERSION: 2.3 -->
4
+ <!-- DATE: February 2007 -->
5
+ <!-- -->
6
+ <!-- ============================================================= -->
7
+
8
+ <!-- ============================================================= -->
9
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
10
+ <!-- TYPICAL INVOCATION -->
11
+ <!--
12
+ "-//NLM//DTD Archiving and Interchange DTD Suite Common (Shared) Elements Module v2.3 20070202//EN"
13
+ Delivered as file "common.ent" -->
14
+ <!-- ============================================================= -->
15
+
16
+
17
+
18
+ <!-- ============================================================= -->
19
+ <!-- SYSTEM: Archiving and Interchange DTD Suite -->
20
+ <!-- -->
21
+ <!-- PURPOSE: Defines the common parameter entities, calls the -->
22
+ <!-- shared modules (such as special characters and -->
23
+ <!-- notations) and provides declarations for elements -->
24
+ <!-- that do not properly fit into one class, since -->
25
+ <!-- they can be used at more than one structural level-->
26
+ <!-- -->
27
+ <!-- CONTAINS: 1) Default classes for elements defined in this -->
28
+ <!-- module. May be overridden by values in the -->
29
+ <!-- DTD's Customization Module -->
30
+ <!-- 2) Parameter Entities for attribute values -->
31
+ <!-- 3) Parameter Entities for content models -->
32
+ <!-- 4) Parameter Entities for attribute lists -->
33
+ <!-- 5) Elements used in many modules/classes -->
34
+ <!-- - Address elements -->
35
+ <!-- - Date elements -->
36
+ <!-- - Personal name elements -->
37
+ <!-- - Common metadata elements (shared by both -->
38
+ <!-- article metadata and bibliographic -->
39
+ <!-- reference metadata -->
40
+ <!-- -->
41
+ <!-- MODULES REQUIRED: -->
42
+ <!-- 1) Standard XML Special Characters Module -->
43
+ <!-- (%xmlspecchars.ent;) -->
44
+ <!-- 2) Custom XML Special Characters (%chars.ent;) -->
45
+ <!-- 3) Notation Declarations (%notat.ent;) -->
46
+ <!-- -->
47
+ <!-- CREATED FOR: -->
48
+ <!-- Digital archives and publishers who wish to -->
49
+ <!-- create a custom XML DTD for original markup of -->
50
+ <!-- journal literature, books, and related material, -->
51
+ <!-- or for archiving and transferring such material -->
52
+ <!-- between archives. -->
53
+ <!-- -->
54
+ <!-- This DTD is in the public domain. An organization -->
55
+ <!-- that wishes to create its own DTD from the suite -->
56
+ <!-- may do so without permission from NLM. -->
57
+ <!-- -->
58
+ <!-- The suite has been set up to be extended using a -->
59
+ <!-- new DTD file and a new DTD-specific customization -->
60
+ <!-- module to redefine the many Parameter Entities. -->
61
+ <!-- Do not modify the suite directly or redistribute -->
62
+ <!-- modified versions of the suite. -->
63
+ <!-- -->
64
+ <!-- In the interest of maintaining consistency and -->
65
+ <!-- clarity for potential users, NLM requests: -->
66
+ <!-- -->
67
+ <!-- 1. If you create a DTD from the Archiving and -->
68
+ <!-- Interchange DTD Suite and intend to stay -->
69
+ <!-- compatible with the suite, then please include -->
70
+ <!-- the following statement as a comment in all of -->
71
+ <!-- your DTD modules: -->
72
+ <!-- "Created from, and fully compatible with, -->
73
+ <!-- the Archiving and Interchange DTD Suite." -->
74
+ <!-- -->
75
+ <!-- 2. If you alter one or more modules of the suite, -->
76
+ <!-- then please rename your version and all its -->
77
+ <!-- modules to avoid any confusion with the -->
78
+ <!-- original suite. Also, please include the -->
79
+ <!-- following statement as a comment in all your -->
80
+ <!-- DTD modules: -->
81
+ <!-- "Based in part on, but not fully compatible -->
82
+ <!-- with, the Archiving and Interchange DTD -->
83
+ <!-- Suite." -->
84
+ <!-- -->
85
+ <!-- Suggestions for refinements and enhancements to -->
86
+ <!-- the DTD suite should be sent in email to: -->
87
+ <!-- archive-dtd@ncbi.nlm.nih.gov -->
88
+ <!-- -->
89
+ <!-- ORIGINAL CREATION DATE: -->
90
+ <!-- December 2002 -->
91
+ <!-- -->
92
+ <!-- CREATED BY: Jeff Beck (NCBI) -->
93
+ <!-- Deborah Lapeyre (Mulberry Technologies, Inc.) -->
94
+ <!-- Bruce Rosenblum (Inera Inc.) -->
95
+ <!-- -->
96
+ <!-- NLM thanks the Harvard University Libraries, both -->
97
+ <!-- for proposing that a draft archiving NLM DTD for -->
98
+ <!-- life sciences journals be extended to accommodate -->
99
+ <!-- journals in all disciplines and for sponsoring -->
100
+ <!-- Bruce Rosenblum's collaboration with other DTD -->
101
+ <!-- authors in completing Version 1.0. The Andrew W. -->
102
+ <!-- Mellon Foundation provided support for these -->
103
+ <!-- important contributions. -->
104
+ <!-- -->
105
+ <!-- ============================================================= -->
106
+
107
+
108
+ <!-- ============================================================= -->
109
+ <!-- DTD VERSION/CHANGE HISTORY -->
110
+ <!-- ============================================================= -->
111
+ <!--
112
+
113
+ =============================================================
114
+
115
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
116
+
117
+ =============================================================
118
+ Version 2.3 (DAL/BTU) v2.3 (2007-02-02)
119
+
120
+ Enhancement Release (2.3) following the Working Group meetings
121
+ of Oct-Nov/2006-Jan/2007. No backward-incompatible changes.
122
+ Archiving loosened even more. New structures for all the DTDs.
123
+
124
+ 45. NEW LANGUAGE ATTRIBUTE - Added "xml:lang" attribute to the
125
+ following elements
126
+ - trans-title
127
+ - trans-subtitle
128
+
129
+ 44. NEW TYPE ATTRIBUTES - Added "content-type" attribute to the
130
+ following elements
131
+ - addr-line
132
+ - address
133
+ - aff
134
+ - alt-text
135
+ - conf-acronym
136
+ - conf-date
137
+ - conf-loc
138
+ - conf-name
139
+ - conference
140
+ - contract-num
141
+ - contract-sponsor
142
+ - copyright-holder
143
+ - copyright-statement
144
+ - copyright-year
145
+ - country
146
+ - day
147
+ - elocation-id
148
+ - email
149
+ - fpage
150
+ - grant-num
151
+ - grant-sponsor
152
+ - issue
153
+ - issue-id
154
+ - issue-title
155
+ - fpage
156
+ - lpage
157
+ - long-desc
158
+ - month
159
+ - name
160
+ - object-id
161
+ - page-range
162
+ - phone
163
+ - price
164
+ - publisher
165
+ - role
166
+ - season
167
+ - sig
168
+ - sigblock
169
+ - string-date
170
+ - suffix
171
+ - title
172
+ - trans-subtitle
173
+ - trans-title
174
+ - uri
175
+ - volume
176
+ - volume-id
177
+ - year
178
+ - x
179
+
180
+ 43. PRICE ATTRIBUTE
181
+ a. Added new PE -%price-atts; to provide attributes for <price>
182
+ b. Added new attribute "currency" to price. Although it is an
183
+ #IMPLIED CDATA attribute, best practice is to use it for
184
+ every price and use the currency code 3-letter values
185
+ given in ISO 4217.
186
+
187
+ 43. CUSTOM META ATTRIBUTES - Added %might-link-atts; to
188
+ <custom-meta> as well as "id", see 40. below.
189
+
190
+ 42. SEQUENCE ATTRIBUTES - Added CDATA "seq" attributes to
191
+ <volume> and <issue> to hold the sequence number for articles
192
+ that are numbered in one sequence for the entire issue or the
193
+ entire volume, just as the "seq" attribute on <fpage> holds
194
+ the number (letter) of articles which are in a sequence on the
195
+ same page.
196
+
197
+ 41. RELATED ARTICLE ELEMENTS - Added <journal-id> to
198
+ <related-article> textual mixture (related-article-elements)
199
+ using the new journal-id.class. Moved <journal-id> from
200
+ journalmeta.ent here to common.
201
+
202
+ 40. NEW ID ATTRIBUTES - Added an "id" attribute of type ID to the
203
+ following elements:
204
+ - attrib (new attrib-atts)
205
+ - custom-meta (new custom-meta-atts)
206
+ - sig-block (new sig-block-atts)
207
+ - title (new title-atts)
208
+
209
+ 39. NEW PARAMETER ENTITIES
210
+ a. Added parameter entities for the content models of:
211
+ - publisher
212
+ b. Added parameter entities for the attribute lists of:
213
+ - ack
214
+ - address
215
+ - addr-line
216
+ - alt-text
217
+ - article-title
218
+ - conf-acronym
219
+ - conf-date
220
+ - conf-loc
221
+ - conf-name
222
+ - conference
223
+ - copyright-holder
224
+ - copyright-statement
225
+ - copyright-year
226
+ - country
227
+ - day
228
+ - def
229
+ - email
230
+ - fax
231
+ - institution
232
+ - issue-id
233
+ - issue-title
234
+ - fpage
235
+ - long-desc
236
+ - lpage
237
+ - month
238
+ - name
239
+ - page-range
240
+ - phone
241
+ - price
242
+ - role
243
+ - season
244
+ - suffix
245
+ - sig
246
+ - string-date
247
+ - trans-title
248
+ - trans-subtitle
249
+ - uri
250
+ - year
251
+
252
+ 38. GRANT INFORMATION - For the first time, separated <sponsor>
253
+ information from <grant> information, creating two new
254
+ elements (and their accompanying parameter entities):
255
+ - -%grant-elements;
256
+ - <grant-num>
257
+ - -%grant-sponsor-elements;
258
+ - <grant-sponsor>
259
+
260
+ 37. CONTRACT INFORMATION - Moved the following to this module from
261
+ articlemeta.ent because the contract information is now allowed
262
+ both as part of the metadata and loose inside a paragraph.
263
+ - -%contract-atts;
264
+ - -%contract-elements;
265
+ - <contract-num>
266
+ - -%contract-sponsor-elements;
267
+ - <contract-sponsor>
268
+
269
+ 36. SECTION METADATA - Added keywords and permissions to the
270
+ possible elements inside Section Metadata <sec-meta> by
271
+ changing the sec-meta-model
272
+
273
+ 35. ANONYMOUS - Added a new element <anonymous>, with two new
274
+ parameter entities -%anonymous-model; and
275
+ -%anonymous-elements;. Model will be set to EMPTY in Blue
276
+ and #PCDATA with basic face markup in Green.
277
+
278
+ 34. Updated public identifier to "v2.3 20070202//EN"
279
+
280
+ =============================================================
281
+ Version 2.2 (DAL/BTU) v2.2 (2006-04-30)
282
+
283
+ Backwards-compatible changes to meet operational needs.
284
+ Typical changes include adding attribute values and making
285
+ required elements optional.
286
+
287
+ 33. RELATED ARTICLE TYPE - Added new suggested value for
288
+ "partial-retraction"
289
+
290
+ 32. PRICE - Added new elements <price> and made a new class for it
291
+ (-%price.class;) so that it can be added to <product>
292
+
293
+ 31. SIG-BLOCK - Added new elements <sig-block> and <sig>. A
294
+ <sig-block> may be located at the end of the <body> in journal
295
+ articles (Blue and Green) and at the end of sections <sec> in
296
+ books. It main contain one or more Signatures <sig> or just
297
+ #PCDATA.
298
+
299
+ 30. LONG DESC - Added asterisk to the model for <long-desc>
300
+
301
+ 29. SECTION MODELS
302
+
303
+ a. Added new element <sec-meta> to the start of the content
304
+ models for section (-%sec-model;) and section optional
305
+ title model (-%sec-opt-title-model;). There are sections that
306
+ are authored independently, even in journal articles, and
307
+ this is the start of allowing additional metadata for such
308
+ sections. The first content for <sec-meta> will be
309
+ <contrib-group>
310
+
311
+ b. New Parameter Entity -%sec-meta-model; to hold the
312
+ content of the new element.
313
+
314
+ c. New element declaration for <sec-meta>
315
+
316
+ 28. Updated public identifier to "v2.3 20070202//EN"
317
+
318
+ =============================================================
319
+ Version 2.1 (DAL/BTU) v2.1 (2005-06-30)
320
+
321
+ Changed to MathML 2.0 and MathML 2.0 Character Sets
322
+ Added new material requested by NCBI
323
+
324
+ 27. JOURNAL-ID-ATTS - Removed the duplicate declaration
325
+
326
+ 26. RELATED-ARTICLE-ATTS - Changed to use the journal-id-atts
327
+ Parameter Entity, which was moved to allow this use
328
+
329
+ 25. PUB-ID-TYPES - Added new values "doaj" and "manuscript"
330
+ to pub-id-types and suggested journal ID types
331
+
332
+ 24. PERMISSIONS - Added a new <permissions> wrapper element to
333
+ consolidate copyright and licensing information. For backwards
334
+ compatibility, the new element will be added alongside the
335
+ existing copyright elements. Best practice will be to use the
336
+ new container, but <copyright-statement>, <copyright-year>,
337
+ and <license> will be accepted in their old positions inside
338
+ <article-meta>
339
+ - Added <permissions> to the following models:
340
+ - article-meta>
341
+ - Added <copyright-holder> to <permissions>
342
+ - Moved <copyright-year> here from article-meta module
343
+ - Moved <license> here from article-meta module
344
+ - Moved -%license-atts; here from article-meta module
345
+ - Moved -%license-model; here from article-meta module
346
+
347
+ 23. DATE ATTS PARAMETER ENTITY - The Parameter Entity -%date-atts;
348
+ was defined, but not used on the <date> element. Since the
349
+ attribute list was hard-coded at the element, it could not
350
+ be over-ridden. PE is now used.
351
+
352
+ 22. X-GENERATED TEXT - Added "xml:space" attribute with a value of
353
+ "preserve" to the <x> element
354
+
355
+ 21. JOURNAL TITLES
356
+ a) Defined new element <journal-subtitle>; used in
357
+ <journal-meta>
358
+
359
+ 20. Updated public identifier to "v2.3 20070202"
360
+
361
+ =============================================================
362
+ Version 2.0 (DAL/BTU) v2.0 (2004-08-30)
363
+
364
+
365
+ Major requirement changes led to the new release, producing
366
+ DTD version "2.0":
367
+ a) The splitting of the Archival and Interchange Tag Set
368
+ DTDs into three DTDs from two: an authoring DTD, an
369
+ archive regularization and interchange DTD (the
370
+ current Blue Publishing DTD), and a preservationist
371
+ archive DTD (the current Green Archiving and Interchange
372
+ DTD).
373
+ b) AIT Working Group suggestions from the June 04 meeting
374
+ and June/July 2004 followup discussions
375
+ c) Suite remodularization to meet new (and newly articulated)
376
+ modularization requirements
377
+ d) New or renamed classes and mixes to make modifications
378
+ easier and more consistent
379
+
380
+
381
+ 29. NEW ELEMENT <x> GENERATED TEXT AND PUNCTUATION
382
+ Added a container element to hold punctuation or other
383
+ generated text, typically when 1) an archive decides not
384
+ to have any text generated and thus to pre-generate such
385
+ things as commas or semicolons between keywords or 2)
386
+ when an archive receives text with <x> tags embedded and
387
+ wishes to retain them.
388
+
389
+ 28. PUBLISHER - Moved element here from %journalmeta.ent;
390
+ module since Book DTD also needed it and was not including
391
+ that module.
392
+
393
+ 27. PAGE ELEMENT ATTRIBUTES
394
+ a. Made an Parameter Entity for:
395
+ - %fpage-atts;
396
+ - %elocation-id-atts;
397
+ b. Gave %elocation-id-atts" the attribute "seq"
398
+
399
+ 26. PUB ID TYPES - Added the new attribute values to the
400
+ Parameter Entity %pub-id-types;, which is used on <article>
401
+ and other elements. New values: pmcid and art-access-id
402
+
403
+ 25. CUSTOM METADATA - Added the new <custom-meta> element, its
404
+ components, and its wrapper. This element is used to insert
405
+ name/value pairs for metadata elements that are in source
406
+ material but were never envisioned by this DTD. Allowed this
407
+ element at the end of <article-meta>.
408
+
409
+ 24. DATES
410
+ a. Made a new Parameter Entity %string-date-elements; to
411
+ hold all the elements that may be mixed with #PCDATA
412
+ inside a <string-date>
413
+ b. Also used %date-parts.class; and %x.class; (currently
414
+ used only in Green-Archiving) in the new PE
415
+ %string-date-elements;
416
+
417
+ 23. COMPLETE MODELS WHEN OVER-RIDING A MODEL
418
+ (for all Parameter Entities suffixed "-model")
419
+ ### Customization Alert ###
420
+ Made all the model over-rides consistent. Some included
421
+ the outer parentheses, some did not. They all do now,
422
+ as this is the most flexible system, allowing for
423
+ #PCDATA, mixed, or element content. (This is in direct
424
+ contrast to the "-element" suffixed models, which are
425
+ designed to prohibit element content and permit only
426
+ #PCDATA or mixed content.) Added parentheses to Parameter
427
+ Entity and removed them from the Element Declaration.
428
+ - %custom-meta-model;
429
+ - %custom-meta-wrap-model;
430
+ - %def-model;
431
+ - %sec-model;
432
+ - %sec-opt-title-model;
433
+ - Removed parentheses from <notes>, <ack>, <address>, <date>
434
+
435
+ 22. CITATION MODEL / COPYRIGHT STATEMENT MODEL
436
+ ### Customization Alert ###
437
+ a. Replaced the Parameter Entity %copyright-statement-model;
438
+ with the OR list Parameter Entity
439
+ %copyright-statement-elements; and used that
440
+ within the content model of <copyright-statement>
441
+ b. Citation - In the PE %citation-elements; also
442
+ changed the PE -%ext-links.class; ==> -%address-links.class;
443
+ (Changed the content model of citation to match.)
444
+ c. In -%copyright-statement-elements;, replaced the mix
445
+ -%rendition-plus; with its constituent classes
446
+ d. In -%citation-elements;, replaced the mix -%simple-text;
447
+ with its constituent classes (with exception of
448
+ %address-link.class;).
449
+
450
+ 21. RELATED ARTICLE
451
+ ### Customization Alert ###
452
+ - Renamed
453
+ -%related-article-model; ==> -%related-article-elements;
454
+ (To match the DTD naming convention that full content
455
+ models are named with a "-model" suffix and groups of
456
+ elements to be added to #PCDATA for a particular
457
+ content model are named "-elements".)
458
+ - Started "-related-article-elements" PE with an OR Bar
459
+ - Deleted "ext-links.class", because these elements are
460
+ already in the %references.class; (no model change)
461
+
462
+ 20. INLINE MATH - <inline-formula> added to:
463
+ - %label-elements;
464
+
465
+ 19. RELATED ARTICLE ATTRIBUTES - Added the following attributes
466
+ to the element <related-article>:
467
+ a. "id" - to provide a unique identifier
468
+ b. "alternate-form-of", which works (similarly to the same
469
+ attribute when used on a <graphic> element) to point to
470
+ another <related-article> element within the same document
471
+ as an alternate form of the related article.
472
+
473
+ 18. ISSUE TITLE <issue-title> - Created new element for a theme or
474
+ special issue title
475
+ - Defined here in the common module
476
+ - Added to <article-meta>
477
+ - Added to %references.class; (therefore to <citation>,
478
+ <product>, and <related-article>
479
+ - Created new Parameter Entities %issue-title-elements;
480
+ which hold the OR-group of elements that may be mixed with
481
+ #PCDATA inside the content model
482
+
483
+ 17. ATTRIBUTION
484
+ - Moved <attrib> and its Parameter Entities from the paragraph
485
+ module to here, as it is numerous elements, such as <array>,
486
+ <boxed-text>, <fig>, <table-wrap>, etc., in the Archival DTD.
487
+
488
+ 16. CUSTOM METADATA - Added the new <custom-meta> element, its
489
+ components, and its wrapper. This element is used to insert
490
+ name/value pairs for metadata elements that are in source
491
+ material but were never envisioned by this DTD. Allowed this
492
+ element at the end of <article-meta> and <journal-meta>.
493
+
494
+ 15. EMAIL- Considered to be just another type of external link, as
495
+ <ext-link> is, so added to:
496
+ - %collab-elements;
497
+ - %copyright-statement-elements;
498
+
499
+ 14. DATES
500
+ a. Added new class %date-parts.class; to hold all the
501
+ potential components of date, such as <year>, <day>,
502
+ etc.
503
+ b. Made a new Parameter Entity %string-date-elements; to
504
+ hold all the elements that may be mixed with #PCDATA
505
+ inside a <string-date>
506
+ c. Used %date-parts.class; in that model.
507
+
508
+ 13. ROLE ELEMENT - Was added to the model for <citation>, thus
509
+ moved to this module from the article metadata module.
510
+
511
+
512
+ 12. NEW IDENTIFICATION ELEMENTS - in view of the larger role that
513
+ some publishers are giving to DOIs:
514
+
515
+ a. OBJECT ID - Added a new class Parameter Entity
516
+ %id.class; to hold the new element <object-id> Object
517
+ Identifier. The <object-id> element is used to capture any
518
+ publisher's or archive's ID, such as a DOI. This was modeled
519
+ as an element (rather than as an attribute) to allow for
520
+ multiple IDs. New PE used in:
521
+ - %references.class (therefore inside <citation>,
522
+ <related-article>, and <product>)
523
+ - metadata objects such as <abstract>
524
+ - display objects such as <figure>.
525
+ Added PE %object-id-atts; to hold the element's attributes
526
+
527
+ b. ISSUE ID <issue-id> - new element for an identifier such
528
+ as a DOI associated with a journal issue (as opposed to the
529
+ existing element <issue>, which is defined as the issue
530
+ number)
531
+ - Defined here in the common module
532
+ - Added to <article-meta>
533
+ - Added to %references.class; (therefore to <citation>,
534
+ <product>, and <related-article>
535
+ - Created PE %issue-id-atts; to hold the attributes.
536
+
537
+ c. VOLUME ID <volume-id> - new element for an identifier such
538
+ as a DOI associated with a volume of a journal (as opposed
539
+ to the existing element <volume>, which is defined as the
540
+ volume number)
541
+ - Defined here in the common module
542
+ - Added to <article-meta>
543
+ - Added to %references.class; (therefore to <citation>,
544
+ <product>, and <related-article>
545
+ - Created new Parameter Entities %volume-id-elements;
546
+ which hold the OR-group of elements that may be mixed with
547
+ #PCDATA inside the content model
548
+ - Added PE %volume-id-atts; to hold the attributes.
549
+
550
+
551
+ Note: All ID attributes for these new identification
552
+ elements was set to use the "pub-id-type" attribute,
553
+ which is for Archival (Green) set as a CDATA attribute.
554
+
555
+ 11. NAME CLASS / STRING NAME / PERSON NAME CLASS
556
+ a. Created a new element <string-name> for names that
557
+ do not follow the former, strict personal name model.
558
+ <string-name> holds any combination of #PCDATA and any of
559
+ the known personal-name elements such as <surname>.
560
+ - Used a new Parameter Entity %string-name-elements;
561
+ in the content model
562
+
563
+ b. Created a new class %name.class; to hold all the ways
564
+ to name people: <name>, <string-name>, and <collab>
565
+ who produce products or articles.
566
+
567
+ c. Allowed <string-name> to be used anywhere <name> is
568
+ used. Inside
569
+ - citation (by adding to %references.class;)
570
+ - product (by adding to %references.class;)
571
+
572
+ d. Added new attribute "initials" to the personal name
573
+ components: <surname> and <given-names>. This provides
574
+ a way to preserve the initials, for matching services
575
+ that prefer initials to full names. Since there are
576
+ many cases in which the initials cannot be determined
577
+ programmatically, we merely provide a bucket to record
578
+ them.
579
+
580
+ e. Added new Parameter Entities %given-name-atts; and
581
+ %surname-atts; to hold the new "initials" attribute.
582
+
583
+ 10. ATTRIBUTE VALUE LISTS - The Green (Archival) DTD needed to
584
+ change all explicit attribute value lists in the DTD to CDATA.
585
+ In the future, explicit list types will be a feature of the
586
+ Blue (Publishing) and new Authoring DTDs. Therefore, added
587
+ Parameter Entities to hold the following attributes:
588
+ - date-type
589
+
590
+ 9. RELATED ARTICLE ATTRIBUTES - Added the following attributes
591
+ to the element <related-article>:
592
+ - "id ID #IMPLIED" attribute, so the related-article
593
+ can be referenced.
594
+ - "ext-link-type" - to indicate the type of link used to
595
+ point to the related article. Attribute was used with
596
+ exactly the same content (CDATA) and suggested values
597
+ as when used with the element <ext-link>.
598
+ - "issue" - used (along with "vol", "page", and "journal-id")
599
+ to provide metadata concerning the related article
600
+ - "journal-id"- used (along with "vol", "page", and "issue")
601
+ to provide metadata concerning the related article.
602
+ - "journal-id-type" - Performs the same function that this
603
+ attribute performs for the element <journal-id>. The
604
+ "journal-id" values are the same as those for existing
605
+ journal identifiers plus "issn".
606
+ - "alternate-form-of", which works (similarly to the same
607
+ attribute when used on a <graphic> element) to point to
608
+ another <related-article> element within the same document
609
+ as an alternate form of the related article.
610
+
611
+ 8. PARAMETER ENTITY CLEANUP AND REGULARIZATION
612
+
613
+ a. RENAME ELEMENT MIXES NOT TO END IN "-elements", since that
614
+ suffix is reserved for mixes that are added to #PCDATA in
615
+ a particular element
616
+ ### Customization Alert ###
617
+ Names ending in "-elements" saved for element-specific mixes
618
+ that will be added to #PCDATA for one element
619
+ - %sec-back-matter-elements; ==> %sec-back-matter-mix;
620
+ (Used in -%sec-model; and -%sec-opt-title-model;)
621
+
622
+ b. NEW CLASSES - Largely for classing and modification reasons,
623
+ the following new classes were added:
624
+ - %date.class;
625
+ - %def.class;
626
+ - %degree.class;
627
+ - %id.class;
628
+ - Removed duplicate %person-name.class;
629
+
630
+ c. NEW MIXES - To correct potential classing problems, new
631
+ Parameter Entities were created. The following content
632
+ models were changed to use these new entities.
633
+ - <etal> -%etal-elements;
634
+ - <ext-link> -%ext-link-elements;
635
+ - <fax> -%fax-elements;
636
+ - <given-names> -%given-names-elements;
637
+ - <issn> -%issn-elements;
638
+ - <issue> -%issue-elements;
639
+ - <label> -%label-elements;
640
+ - <long-desc> -%long-desc-elements;
641
+ - <phone> -%phone-elements;
642
+ - <prefix> -%prefix-elements;
643
+ - <publisher-name> -%publisher-name-elements;
644
+ - <role> -%role-elements;
645
+ - <suffix> -%suffix-elements;
646
+ - <surname> -%surname-elements;
647
+ - <uri> -%uri-elements;
648
+ - <volume> -%volume-elements;
649
+ - <volume-id> -%volume-id-elements;
650
+
651
+ - <bio> %bio-model; (which uses %just-para.class;)
652
+ - <def> %def-model;
653
+ - <def> %just-para.class;
654
+
655
+ d. RENAME CLASSES
656
+ ### Customization Alert ###
657
+ Not all classes ended in the ".class" suffix. Changed the
658
+ following to add the class suffix:
659
+ - %address-elements; (renamed -%address.class;) used in
660
+ - %aff-elements;
661
+ - %publisher-loc-elements;
662
+ - %address-model;
663
+ - %inline-math.class; used in -%label-elements;
664
+
665
+ e. PE %attrib-elements;
666
+ ### Customization Alert ###
667
+ Uses %emphasized-text; which now starts with an OR bar, so
668
+ removed the OR bar from this PE.
669
+
670
+ f. LINK CLASSES
671
+ - In %aff-elements;, replaced %link.class; with
672
+ the following classes (via use of %all-phrase;)
673
+ (no DTD change):
674
+ - %address-link.class; (external used in addresses)
675
+ - %simple-link.class; (the internal links, same)
676
+ - %article-link.class; (for journal articles)
677
+ - In -%collab-elements;
678
+ - Replaced -%ext-links.class; with the following class
679
+ (via use of %all-phrase;)
680
+ (no DTD change):
681
+ - address-link.class; (external used in addresses)
682
+ - Deleted -%inpara-address;
683
+ (No model change, %address-link.class; covers it.)
684
+ - In %copyright-statement-elements;, replaced
685
+ -%inpara-address; with -%address-link.class;
686
+ (via use of %all-phrase;)
687
+
688
+ 7. DEFAULT CLASSES - Were moved from this module to
689
+ %default-classes.ent;
690
+
691
+ 6. Updated public identifier to "v2.3 20070202"
692
+
693
+ =============================================================
694
+ Version 1.1 (TRG) v1.1 (2003-11-01)
695
+
696
+ 5. Made <copyright-statement> model into a parameter entity in
697
+ order to add <ext-link> to the content model.
698
+ Rationale: Permit linkage between copyright statement and
699
+ copyright holder's site.
700
+
701
+ 4. Added attribute "content-type" to element <ack>.
702
+ Rationale: To identify and preserve the semantic intent of
703
+ semantically rich source documents.
704
+
705
+ 3. Added ID attribute to the following elements:
706
+ - <ack>
707
+ - <address>
708
+ - <alt-text>
709
+ - <ext-link> (by modifying %ext-link-atts;)
710
+ - <institution>
711
+ - <long-desc>
712
+ - <notes> (by modifying parameter entity %notes-atts;)
713
+ Rationale: Provide unique identifier so these elements can be
714
+ linked to.
715
+
716
+ 2. Added element <label> to content model of <aff> (by adding
717
+ -%label.class; to parameter -%aff-elements;)
718
+ Rationale: To provide <label> when needed for format
719
+ over-ride.
720
+
721
+ =============================================================
722
+ Version 1.0 Changes Before Public Release
723
+ (Lapeyre) v1.0 (2002-12-25)
724
+
725
+ 1. ETAL - Changed the content model of <etal> to replace the
726
+ entire content model with a Parameter Entity, not just name
727
+ some elements that may mix with #PCDATA. Rationale: The
728
+ Authoring DTD would like to make <etal> EMPTY.
729
+ -->
730
+
731
+
732
+ <!-- ============================================================= -->
733
+ <!-- PARAMETER ENTITY DEPENDENCIES
734
+ Requires the following parameter entities
735
+ be defined before calling this module,
736
+ usually accomplished in the Customization
737
+ Module for the specific DTD:
738
+ - %address.class;
739
+ - %break.class;
740
+ - %emphasis.class;
741
+ - %inline-display.class;
742
+ - %just-rendition;
743
+ - %label.class;
744
+ - %para-level;
745
+ - %references.class;
746
+ - %rendition-plus;
747
+ - %sec-back-matter-mix;
748
+ - %sec-level;
749
+ - %sec-opt-title-model;
750
+ - %simple-link.class;
751
+ - %simple-phrase;
752
+ - %simple-text;
753
+ - %subsup.class;
754
+ - %might-link-atts; -->
755
+ <!-- ============================================================= -->
756
+
757
+
758
+ <!-- ============================================================= -->
759
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE VALUES -->
760
+ <!-- ============================================================= -->
761
+
762
+
763
+ <!-- HISTORY DATE TYPES -->
764
+ <!-- The <history> element contains one or more
765
+ <date> elements that record events in the
766
+ life of a publication.
767
+ date-type Attribute should only be used if the date
768
+ is one of the known types; otherwise omit
769
+ the attribute.
770
+ Values are:
771
+ accepted - Date manuscript was
772
+ accepted
773
+ received - Date manuscript received
774
+ rev-request - Date revisions were
775
+ requested or manuscript
776
+ was returned
777
+ rev-recd - Date revised manuscript
778
+ was received -->
779
+ <!ENTITY % date-types "accepted | received | rev-request |
780
+ rev-recd" >
781
+
782
+
783
+ <!-- ARTICLE/PUBLICATION IDENTIFIER TYPES -->
784
+ <!-- The "pub-id-type" attribute names the
785
+ type of identifier, or the organization or
786
+ system that defined this identifier for the
787
+ identifier of the journal article or a
788
+ cited publication.
789
+ Used on the <article-id> element, which
790
+ holds an identifier for the entire article.
791
+ Also used on the <pub-id> element, which
792
+ is an identifier for a publication cited in
793
+ a bibliographic reference (citation).
794
+ Valid Types include:
795
+ art-access-id
796
+ - Generic article accession id for
797
+ interchange and retrieval between
798
+ archives
799
+ coden - Obsolete PDB/CCDC identifier (may
800
+ be present on older articles)
801
+ be present on older articles)
802
+ doaj - Directory of Open Access Journals
803
+ doi - Digital Object Identifier for
804
+ the article
805
+ manuscript
806
+ A manuscript
807
+ medline- NLM Medline identifier
808
+ other - None of the named identifiers
809
+ pii - Publisher Item Identifier, see
810
+ /epub/piius.htm
811
+ pmcid - PubMed Central identifier
812
+ pmid - PubMed ID (see
813
+ www.ncbi.nlm.nih.gov/entrez/
814
+ query.fcgi?db=PubMed)
815
+ publisher-id -
816
+ Publisher's identifying number
817
+ such as an 'article-id', 'artnum',
818
+ 'identifier', 'article- number',
819
+ etc.
820
+ sici - Serial Item and Contribution
821
+ Identifier (SICI). A journal
822
+ article may have more than one
823
+ SICI, one for a print version and
824
+ one for an electronic version. -->
825
+ <!ENTITY % pub-id-types "art-access-id | coden | doaj | doi |
826
+ manuscript | medline | other | pii |
827
+ pmcid | pmid | publisher-id | sici" >
828
+
829
+
830
+ <!-- ============================================================= -->
831
+ <!-- PARAMETER ENTITIES FOR CONTENT MODELS -->
832
+ <!-- ============================================================= -->
833
+
834
+
835
+ <!-- DATE ELEMENTS MODEL -->
836
+ <!-- The content models for elements that describe
837
+ dates, such as Publication Date <pub-date>
838
+ and History Dates <date>. The <string-date>
839
+ element holds dates for which months and
840
+ years are not given, for example "first
841
+ quarter", "spring", etc. -->
842
+ <!ENTITY % date-model "( ( (day?, month?) | season)?,
843
+ year?, string-date?)" >
844
+
845
+
846
+ <!-- CONTENT MODEL FOR A STRUCTURAL SECTION -->
847
+ <!-- The model for a section that requires that a
848
+ section title be present, used for elements
849
+ such as Section and Appendix. -->
850
+ <!ENTITY % sec-model "(sec-meta?, label?, title, (%para-level;)*,
851
+ (%sec-level;)*,
852
+ (%sec-back-matter-mix;)* )" >
853
+
854
+
855
+ <!-- CONTENT MODEL FOR A SECTION METADATA -->
856
+ <!-- In some works, each section has a different
857
+ author or some sections are authored by
858
+ different contributors from the enclosing
859
+ article. This wrapper element for
860
+ section-level metadata is used to capture
861
+ information concerning those contributors.
862
+ Some sections can also be assigned keywords,
863
+ and these keywords are also stored in the
864
+ section metadata.
865
+ It may be that permissions differ among
866
+ sections, and, in that case, the
867
+ section-level permissions information also
868
+ resides in sec-meta. -->
869
+ <!ENTITY % sec-meta-model
870
+ "(contrib-group*, kwd-group*,
871
+ permissions?)" >
872
+
873
+
874
+ <!-- CONTENT MODEL FOR AN UNTITLED SECTION -->
875
+ <!-- The model for a section-like structure that
876
+ may or may not have an initial title -->
877
+ <!ENTITY % sec-opt-title-model
878
+ "(sec-meta?, label?, title?, (%para-level;)*,
879
+ (%sec-level;)*,
880
+ (%sec-back-matter-mix;)* )" >
881
+
882
+
883
+ <!-- LINK ELEMENTS -->
884
+ <!-- Elements for use in the linking elements
885
+ such as <xref>, <target>, and <ext-link> -->
886
+ <!ENTITY % link-elements
887
+ "| %emphasis.class; | %subsup.class;" >
888
+
889
+
890
+ <!-- TITLE ELEMENTS -->
891
+ <!-- Elements for use in all the title elements
892
+ such as <title>, <subtitle>, <trans-title>,
893
+ etc.
894
+ Design Note: All inline mixes begin with an
895
+ OR bar, but since %simple-phrase; is an
896
+ inline mix, the OR bar is already there. -->
897
+ <!ENTITY % title-elements
898
+ "%simple-phrase; | %break.class;" >
899
+
900
+
901
+ <!-- ============================================================= -->
902
+ <!-- PARAMETER ENTITIES FOR LINKING ATTRIBUTES -->
903
+ <!-- ============================================================= -->
904
+
905
+
906
+ <!-- XLINK LINK ATTRIBUTES -->
907
+ <!-- Used for elements that are a link by
908
+ definition, such as the <xref> element.
909
+ xlink:href Provides an address or identifier of the
910
+ object to which the link points, for
911
+ example a URI or a filename
912
+ xlink:role Provides a URI reference pointing to some
913
+ resource that describes the role or function
914
+ of this link
915
+ xlink:title
916
+ Describes the meaning of the link in a
917
+ human-readable and displayable fashion
918
+ xlink:show Describes the requested presentation when
919
+ the link is traversed.
920
+ Values are:
921
+ embed Load the new presentation in the
922
+ place of the link
923
+ new Load a new window, frame, pane, or
924
+ other presentation
925
+ none No clue for the application
926
+ other Look to other markup for a clue
927
+ replace Load the new resource in the same
928
+ window, frame, pane, or other
929
+ presentation context as the link
930
+ started in
931
+ xlink:actuate
932
+ When is the link traversed, and under whose
933
+ control.
934
+ Values are:
935
+ none No clue for the application
936
+ onLoad Traverse the link immediately
937
+ upon loading the link
938
+ onRequest
939
+ User or software requests that the
940
+ link be traversed
941
+ other Look to other markup for a clue
942
+ -->
943
+ <!ENTITY % link-atts
944
+ "xmlns:xlink CDATA #FIXED
945
+ 'http://www.w3.org/1999/xlink'
946
+ xlink:type (simple) #FIXED 'simple'
947
+ xlink:href CDATA #REQUIRED
948
+ xlink:role CDATA #IMPLIED
949
+ xlink:title CDATA #IMPLIED
950
+ xlink:show (embed | new | none | other | replace)
951
+ #IMPLIED
952
+ xlink:actuate
953
+ (none | onLoad | onRequest | other)
954
+ #IMPLIED" >
955
+
956
+
957
+ <!-- MIGHT LINK XLINK ATTRIBUTES -->
958
+ <!-- Used for elements which may need to link to
959
+ external sources or other objects within
960
+ the document, but may not necessarily act
961
+ as a link at all. The attribute
962
+ "xlink:href" identifies the object to which
963
+ the link points. -->
964
+ <!ENTITY % might-link-atts
965
+ "xmlns:xlink CDATA #FIXED
966
+ 'http://www.w3.org/1999/xlink'
967
+ xlink:type (simple) #FIXED 'simple'
968
+ xlink:href CDATA #IMPLIED
969
+ xlink:role CDATA #IMPLIED
970
+ xlink:title CDATA #IMPLIED
971
+ xlink:show (embed | new | none | other | replace)
972
+ #IMPLIED
973
+ xlink:actuate
974
+ (none | onLoad | onRequest | other)
975
+ #IMPLIED" >
976
+
977
+
978
+ <!-- ============================================================= -->
979
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTES LISTS -->
980
+ <!-- (ALPHABETICAL ORDER) -->
981
+ <!-- ============================================================= -->
982
+
983
+
984
+ <!-- AFFILIATION ATTRIBUTES -->
985
+ <!-- Attributes for the <ack> element -->
986
+ <!ENTITY % ack-atts
987
+ "id ID #IMPLIED
988
+ content-type
989
+ CDATA #IMPLIED" >
990
+
991
+
992
+ <!-- ADDRESS ATTRIBUTES -->
993
+ <!-- Attributes for the <address> element -->
994
+ <!ENTITY % address-atts
995
+ "id ID #IMPLIED
996
+ content-type
997
+ CDATA #IMPLIED" >
998
+
999
+
1000
+ <!-- ADDRESS LINE ATTRIBUTES -->
1001
+ <!-- Attributes for the <addr-line> element -->
1002
+ <!ENTITY % addr-line-atts
1003
+ "content-type
1004
+ CDATA #IMPLIED" >
1005
+
1006
+
1007
+ <!-- AFFILIATION ATTRIBUTES -->
1008
+ <!-- Attributes for the Affiliation <aff>
1009
+ element -->
1010
+ <!ENTITY % aff-atts
1011
+ "id ID #IMPLIED
1012
+ content-type
1013
+ CDATA #IMPLIED
1014
+ rid IDREFS #IMPLIED" >
1015
+
1016
+
1017
+ <!-- ALTERNATE TEXT ATTRIBUTES -->
1018
+ <!-- Attributes for the <alt-text> element -->
1019
+ <!ENTITY % alt-text-atts
1020
+ "id ID #IMPLIED
1021
+ content-type
1022
+ CDATA #IMPLIED
1023
+ xml:lang NMTOKEN #IMPLIED" >
1024
+
1025
+
1026
+ <!-- ARTICLE TITLE ATTRIBUTES -->
1027
+ <!-- Attributes for the <article-title> element -->
1028
+ <!ENTITY % article-title-atts
1029
+ "id ID #IMPLIED
1030
+ xml:lang NMTOKEN #IMPLIED" >
1031
+
1032
+
1033
+ <!-- ATTRIBUTION ATTRIBUTES -->
1034
+ <!-- Attributes for the <attrib> element -->
1035
+ <!ENTITY % attrib-atts
1036
+ "id ID #IMPLIED" >
1037
+
1038
+
1039
+ <!-- BIOGRAPHY ATTRIBUTES -->
1040
+ <!-- Attributes for <bio> element -->
1041
+ <!ENTITY % bio-atts
1042
+ "id ID #IMPLIED
1043
+ rid IDREFS #IMPLIED
1044
+ content-type
1045
+ CDATA #IMPLIED
1046
+ %might-link-atts;" >
1047
+
1048
+
1049
+ <!-- CITATION ATTRIBUTES -->
1050
+ <!-- Attributes for <citation>
1051
+ citation-type
1052
+ Defines the type of work being referenced.
1053
+ This attribute should be used if the citation
1054
+ is one (or more) of the listed types and
1055
+ should otherwise be omitted. A citation that
1056
+ could be identified as more than one of the
1057
+ types (for example, both a government report
1058
+ and a book) should have the type values
1059
+ combined (e.g., citation-type="gov | book").
1060
+ Suggested values include:
1061
+ book Book
1062
+ confproc Conference proceedings
1063
+ discussion Discussion among a group in
1064
+ some forum - public, private,
1065
+ or electronic, which may or
1066
+ may not be moderated
1067
+ gov Government publication
1068
+ journal Journal article
1069
+ list Listserv
1070
+ other None of the listed types
1071
+ patent Patent or patent application
1072
+ commun Informal or personal
1073
+ communication, such as a
1074
+ phone call or an email
1075
+ message
1076
+ standard Standards document issued by
1077
+ a recognized standards body,
1078
+ such as ISO, ANSI, IEEE,
1079
+ OASIS, etc.
1080
+ thesis Work written as part of the
1081
+ completion of an advanced
1082
+ degree
1083
+ web Website
1084
+ id Unique identifier so the element may be
1085
+ referenced
1086
+ xlink:href Provides an address or identifier of the
1087
+ object to which the link points, for
1088
+ example a URI or a filename -->
1089
+ <!ENTITY % citation-atts
1090
+ "citation-type
1091
+ CDATA #IMPLIED
1092
+ id ID #IMPLIED
1093
+ %might-link-atts;" >
1094
+
1095
+
1096
+ <!-- COLLABORATION ATTRIBUTES -->
1097
+ <!-- Attributes for <collab> -->
1098
+ <!-- collab-type
1099
+ The type or role of the collaborators,
1100
+ what function did they play in the
1101
+ publication.
1102
+ Suggested values include:
1103
+ assignee
1104
+ - Group or company to whom a patent
1105
+ is awarded
1106
+ authors - Content creators
1107
+ editors - Content editors
1108
+ compilers
1109
+ - Put together a composite work
1110
+ from multiple sources
1111
+ guest-editors
1112
+ - A group of editors that have been
1113
+ invited to edit all or part of a
1114
+ work
1115
+ inventors
1116
+ - Idea, software, or machine
1117
+ creators
1118
+ translators
1119
+ - Translated the cited work from
1120
+ one language into another
1121
+ id Unique identifier so that the collaboration
1122
+ can be referenced
1123
+ xlink:href Provides an address or identifier of the
1124
+ object to which the link points, for
1125
+ example a URI or a filename -->
1126
+ <!ENTITY % collab-atts
1127
+ "collab-type
1128
+ CDATA #IMPLIED
1129
+ id ID #IMPLIED
1130
+ %might-link-atts;" >
1131
+
1132
+
1133
+ <!-- CONFERENCE ACRONYM ATTRIBUTES -->
1134
+ <!-- Attributes for the <conf-acronym> element -->
1135
+ <!ENTITY % conf-acronym-atts
1136
+ "content-type
1137
+ CDATA #IMPLIED" >
1138
+
1139
+
1140
+ <!-- CONFERENCE DATE ATTRIBUTES -->
1141
+ <!-- Attributes for the <conf-date> element -->
1142
+ <!ENTITY % conf-date-atts
1143
+ "content-type
1144
+ CDATA #IMPLIED" >
1145
+
1146
+
1147
+ <!-- CONFERENCE LOCATION ATTRIBUTES -->
1148
+ <!-- Attributes for the <conf-loc> element -->
1149
+ <!ENTITY % conf-loc-atts
1150
+ "content-type
1151
+ CDATA #IMPLIED" >
1152
+
1153
+
1154
+ <!-- CONFERENCE NAME ATTRIBUTES -->
1155
+ <!-- Attributes for the <conf-name> element -->
1156
+ <!ENTITY % conf-name-atts
1157
+ "content-type
1158
+ CDATA #IMPLIED" >
1159
+
1160
+
1161
+ <!-- CONFERENCE NUMBER ATTRIBUTES -->
1162
+ <!-- Attributes for the <conf-num> element -->
1163
+ <!ENTITY % conf-num-atts
1164
+ "content-type
1165
+ CDATA #IMPLIED" >
1166
+
1167
+
1168
+ <!-- CONFERENCE SPONSOR ATTRIBUTES -->
1169
+ <!-- Attributes for the <conf-sponsor> element -->
1170
+ <!ENTITY % conf-sponsor-atts
1171
+ "content-type
1172
+ CDATA #IMPLIED" >
1173
+
1174
+
1175
+ <!-- CONFERENCE THEME ATTRIBUTES -->
1176
+ <!-- Attributes for the <conf-theme> element -->
1177
+ <!ENTITY % conf-theme-atts
1178
+ "content-type
1179
+ CDATA #IMPLIED" >
1180
+
1181
+
1182
+ <!-- CONFERENCE ATTRIBUTES -->
1183
+ <!-- Attributes for the <conference> element -->
1184
+ <!ENTITY % conference-atts
1185
+ "content-type
1186
+ CDATA #IMPLIED" >
1187
+
1188
+
1189
+ <!-- CONTRACT ATTRIBUTES -->
1190
+ <!-- Attributes for the <contract-num> element and
1191
+ the <contract-sponsor> element -->
1192
+ <!ENTITY % contract-atts
1193
+ "id ID #IMPLIED
1194
+ rid IDREFS #IMPLIED
1195
+ content-type
1196
+ CDATA #IMPLIED
1197
+ %might-link-atts;" >
1198
+
1199
+
1200
+ <!-- COPYRIGHT HOLDER ATTRIBUTES -->
1201
+ <!-- Attributes for the <copyright-holder>
1202
+ element -->
1203
+ <!ENTITY % copyright-holder-atts
1204
+ "content-type
1205
+ CDATA #IMPLIED" >
1206
+
1207
+
1208
+ <!-- COPYRIGHT STATEMENT ATTRIBUTES -->
1209
+ <!-- Attributes for the <copyright-statement>
1210
+ element -->
1211
+ <!ENTITY % copyright-statement-atts
1212
+ "content-type
1213
+ CDATA #IMPLIED" >
1214
+
1215
+
1216
+ <!-- COPYRIGHT YEAR ATTRIBUTES -->
1217
+ <!-- Attributes for the <copyright-year>
1218
+ element -->
1219
+ <!ENTITY % copyright-year-atts
1220
+ "content-type
1221
+ CDATA #IMPLIED" >
1222
+
1223
+
1224
+ <!-- COUNTRY ATTRIBUTES -->
1225
+ <!-- Attributes for the <country> element -->
1226
+ <!ENTITY % country-atts
1227
+ "content-type
1228
+ CDATA #IMPLIED
1229
+ country CDATA #IMPLIED" >
1230
+
1231
+
1232
+ <!-- CUSTOM METADATA ATTRIBUTES -->
1233
+ <!-- Attributes for the <custom-meta> element -->
1234
+ <!ENTITY % custom-meta-atts
1235
+ "id ID #IMPLIED
1236
+ %might-link-atts;" >
1237
+
1238
+
1239
+ <!-- DATE (HISTORICAL) ATTRIBUTES -->
1240
+ <!-- Attributes for the <date> element -->
1241
+ <!-- date-type Attribute should only be used if the date
1242
+ is one of the known types, otherwise omit
1243
+ the attribute. Values are:
1244
+ accepted - Date manuscript was
1245
+ accepted
1246
+ received - Date manuscript received
1247
+ rev-request - Date revisions were
1248
+ requested or manuscript
1249
+ was returned
1250
+ rev-recd - Date revised manuscript
1251
+ was received -->
1252
+ <!ENTITY % date-atts
1253
+ "date-type (%date-types;) #IMPLIED" >
1254
+
1255
+
1256
+ <!-- DAY ATTRIBUTES -->
1257
+ <!-- Attributes for the <day> element -->
1258
+ <!ENTITY % day-atts
1259
+ "content-type
1260
+ CDATA #IMPLIED" >
1261
+
1262
+
1263
+ <!-- DEFINITION LIST: DEFINITION ATTRIBUTES -->
1264
+ <!-- Attribute list for the <def> element -->
1265
+ <!ENTITY % def-atts
1266
+ "rid IDREFS #IMPLIED
1267
+ id ID #IMPLIED" >
1268
+
1269
+
1270
+ <!-- ELECTRONIC LOCATION IDENTIFIER ATTRIBUTES
1271
+ Attribute list for the <elocation-id>
1272
+ element -->
1273
+ <!ENTITY % elocation-id-atts
1274
+ "content-type
1275
+ CDATA #IMPLIED
1276
+ seq CDATA #IMPLIED" >
1277
+
1278
+
1279
+ <!-- EMAIL ATTRIBUTES -->
1280
+ <!-- Attribute list for the <email> element -->
1281
+ <!ENTITY % email-atts
1282
+ "content-type
1283
+ CDATA #IMPLIED
1284
+ %might-link-atts;" >
1285
+
1286
+
1287
+ <!-- EXTERNAL LINK ATTRIBUTES -->
1288
+ <!-- Attribute list for external links, such as
1289
+ <ext-link> -->
1290
+ <!-- ext-link-type
1291
+ Type of external link. Use this attribute
1292
+ if the type of external link is one of the
1293
+ ones below or another named type.
1294
+ Suggested values include:
1295
+ aoi Astronomical Object Identifier
1296
+ doi Digital Object Identifier
1297
+ ec Enzyme nomenclature - see
1298
+ http://www.chem.qmw.ac.uk/iubmb/enzyme/
1299
+ ftp File transfer protocol
1300
+ email An email address
1301
+ gen GenBank identifier
1302
+ genpept Translated Protein-encoding
1303
+ sequence Database
1304
+ highwire HighWire press intrajournal
1305
+ pmid PubMed identifier
1306
+ pdb Protein data bank. See
1307
+ http://www.rcsb.org/pdb/
1308
+ pgr Plant gene register. See
1309
+ http://www.tarweed.com/pgr/
1310
+ pir Protein Information Resource
1311
+ see http://pir.georgetown.edu
1312
+ pirdb Protein Information Resource
1313
+ see http://pir.georgetown.edu
1314
+ pmc PubMed Central identifier
1315
+ sprot Swiss-Prot. See
1316
+ http://www.ebi.ac.uk/swissprot/
1317
+ uri Website or web service
1318
+ id Unique identifier so the element may be
1319
+ referenced
1320
+ xlink:href Provides an address or identifier of the
1321
+ object to which the link points, for
1322
+ example a URI or a filename -->
1323
+ <!ENTITY % ext-link-atts
1324
+ "ext-link-type
1325
+ CDATA #IMPLIED
1326
+ id ID #IMPLIED
1327
+ %might-link-atts;" >
1328
+
1329
+
1330
+ <!-- FAX ATTRIBUTES -->
1331
+ <!-- Attribute list for the <fax> element -->
1332
+ <!ENTITY % fax-atts
1333
+ "content-type
1334
+ CDATA #IMPLIED" >
1335
+
1336
+
1337
+ <!-- FIRST PAGE ATTRIBUTES -->
1338
+ <!-- Attribute list for the <fpage> element -->
1339
+ <!-- seq Used for sequence number or letter for
1340
+ journals (such as continuous makeup journals)
1341
+ with more than one article starting on the
1342
+ same page -->
1343
+ <!ENTITY % fpage-atts
1344
+ "content-type
1345
+ CDATA #IMPLIED
1346
+ seq CDATA #IMPLIED" >
1347
+
1348
+
1349
+ <!-- GIVEN NAMES ATTRIBUTES -->
1350
+ <!-- Attribute list for the <given-names> element
1351
+ -->
1352
+ <!-- initials The initial(s) for the given names of the
1353
+ person. Particularly useful in those cases
1354
+ that cannot be algorithmically determined. -->
1355
+ <!ENTITY % given-names-atts
1356
+ "initials CDATA #IMPLIED" >
1357
+
1358
+
1359
+ <!-- INSTITUTION ATTRIBUTES -->
1360
+ <!-- Attribute list for <institution> -->
1361
+ <!ENTITY % institution-atts
1362
+ "id ID #IMPLIED
1363
+ content-type
1364
+ CDATA #IMPLIED
1365
+ %might-link-atts;" >
1366
+
1367
+
1368
+ <!-- ISSN ATTRIBUTES -->
1369
+ <!-- Attribute list for <issn> and <isbn> -->
1370
+ <!-- Used to record the type of publication, for
1371
+ example, a print-only publication versus
1372
+ an electronic-only publication, in any of
1373
+ several life stages.
1374
+ Suggested values include:
1375
+ epub - Electronic publication
1376
+ ppub - Print publication
1377
+ epub-ppub - Published in both print and
1378
+ electronic form
1379
+ epreprint - Electronic preprint
1380
+ dissemination
1381
+ ppreprint - Print preprint dissemination
1382
+ ecorrected - Corrected in electronic
1383
+ pcorrected - Corrected in print
1384
+ eretracted - Retracted in electronic
1385
+ pretracted - Retracted in print -->
1386
+ <!ENTITY % issn-atts
1387
+ "pub-type CDATA #IMPLIED" >
1388
+
1389
+
1390
+ <!-- ISSUE ATTRIBUTES -->
1391
+ <!-- Attribute list for the <issue> element -->
1392
+ <!-- seq Used to hold the sequence number or letter
1393
+ for journals which number articles from the
1394
+ start of the issue. -->
1395
+ <!ENTITY % issue-atts
1396
+ "content-type
1397
+ CDATA #IMPLIED
1398
+ seq CDATA #IMPLIED" >
1399
+
1400
+
1401
+ <!-- ISSUE IDENTIFIER ATTRIBUTES -->
1402
+ <!-- Attributes for the <issue-id> element
1403
+ pub-id-type
1404
+ Publication (article) Identifier Type
1405
+ Names the type of identifier, or the
1406
+ organization or system that defined this
1407
+ identifier for the identifier of the journal
1408
+ article or a cited publication. This is an
1409
+ optional CDATA attribute that should be used
1410
+ whenever the type is known.
1411
+ Used on the <article-id> element, which
1412
+ holds an identifier for the entire article.
1413
+ Also used on the <pubid> element, which
1414
+ is an identifier for a publication cited in
1415
+ a bibliographic reference (citation).
1416
+ Suggested values include:
1417
+ coden - Obsolete PDB/CCDC identifier (may
1418
+ be present on older articles)
1419
+ doaj - Directory of Open Access Journals
1420
+ doi - Digital Object Identifier
1421
+ manuscript
1422
+ A manuscript
1423
+ medline- NLM Medline identifier
1424
+ other - None of the named identifiers
1425
+ pii - Publisher Item Identifier, see
1426
+ http://pubs.acs.org/epub/piius.htm
1427
+ or
1428
+ http://www.aip.org/epub/piipr.html
1429
+ pmid - PubMed Central identifier (see
1430
+ www.ncbi.nlm.nih.gov/entrez/
1431
+ query.fcgi?db=PubMed)
1432
+ publisher-id
1433
+ - Publisher's identifier such
1434
+ as an 'article-id', 'artnum',
1435
+ 'identifier', 'article- number',
1436
+ 'pub-id', etc.
1437
+ sici - Serial Item and Contribution
1438
+ Identifier (SICI). A journal
1439
+ article may have more than one
1440
+ SICI, one for a print version and
1441
+ one for an electronic version. -->
1442
+ <!ENTITY % issue-id-atts
1443
+ "pub-id-type
1444
+ CDATA #IMPLIED
1445
+ content-type
1446
+ CDATA #IMPLIED" >
1447
+
1448
+
1449
+ <!-- ISSUE TITLE ATTRIBUTES -->
1450
+ <!-- Attribute list for <issue-title> element -->
1451
+ <!ENTITY % issue-title-atts
1452
+ "content-type
1453
+ CDATA #IMPLIED" >
1454
+
1455
+
1456
+ <!-- JOURNAL IDENTIFIER ATTRIBUTES -->
1457
+ <!-- Attribute list for journal identifier
1458
+ <journal-id> element -->
1459
+ <!-- Indicates whose identifier this is, for
1460
+ example, "pub-id" for a publisher's
1461
+ identifier or "pmc" for PubMed Central.
1462
+ Suggested values include:
1463
+ archive Identifier assigned by an archive
1464
+ or other repository
1465
+ aggregator
1466
+ Identifier assigned by a data
1467
+ aggregator
1468
+ doaj Directory of Open Access Journals
1469
+ doi Digital Object Identifier for the
1470
+ entire journal, not just for the
1471
+ article (rare)
1472
+ index Identifier assigned by an
1473
+ abstracting or indexing service
1474
+ pmc Identifier assigned by PubMed Central
1475
+ for example, the pmc journal
1476
+ abbreviation such as "pnas", "mbc",
1477
+ "nar", "molcellb", which may be the
1478
+ same as the abbreviated journal
1479
+ title
1480
+ publisher-id
1481
+ Identifier assigned by the content
1482
+ publisher, for example, "MOLEC",
1483
+ "MOLCEL"
1484
+ nlm-ta Identifier assigned by the
1485
+ PubMed/Medline, and is typically
1486
+ the journal abbreviation, for
1487
+ example, "Mol Biol Cell", "Nucleic
1488
+ Acids Res", which may be the
1489
+ same as the abbreviated journal
1490
+ title. -->
1491
+ <!ENTITY % journal-id-atts
1492
+ "journal-id-type
1493
+ CDATA #IMPLIED " >
1494
+
1495
+
1496
+ <!-- LICENSE ATTRIBUTES -->
1497
+ <!-- Attributes for the <license> element
1498
+ license-type
1499
+ The type of license granted on a journal
1500
+ article, for example,"open-access" for a
1501
+ license permitting unrestricted use,
1502
+ distribution, and reproduction in any medium,
1503
+ provided the original work is properly cited
1504
+ xlink:href Provides an address or identifier of the
1505
+ object to which the link points, for
1506
+ example a URI or a filename. -->
1507
+ <!ENTITY % license-atts
1508
+ "license-type
1509
+ CDATA #IMPLIED
1510
+ %might-link-atts;" >
1511
+
1512
+
1513
+ <!-- LONG DESCRIPTION ATTRIBUTES -->
1514
+ <!-- Attributes for the <long-desc> element -->
1515
+ <!ENTITY % long-desc-atts
1516
+ "id ID #IMPLIED
1517
+ content-type
1518
+ CDATA #IMPLIED
1519
+ xml:lang NMTOKEN #IMPLIED" >
1520
+
1521
+
1522
+ <!-- LPAGE ATTRIBUTES -->
1523
+ <!-- Attributes for the <lpage> element -->
1524
+ <!ENTITY % lpage-atts
1525
+ "content-type
1526
+ CDATA #IMPLIED" >
1527
+
1528
+
1529
+ <!-- MONTH ATTRIBUTES -->
1530
+ <!-- Attributes for the <month> element -->
1531
+ <!ENTITY % month-atts
1532
+ "content-type
1533
+ CDATA #IMPLIED" >
1534
+
1535
+
1536
+ <!-- NAME ATTRIBUTES -->
1537
+ <!-- Attribute list for the <name> element -->
1538
+ <!ENTITY % name-atts
1539
+ "content-type
1540
+ CDATA #IMPLIED
1541
+ name-style (western | eastern | islensk) 'western'" >
1542
+
1543
+
1544
+ <!-- NOTES ATTRIBUTES -->
1545
+ <!-- Attribute list for the <note> element -->
1546
+ <!-- notes-type To identify the type of note, if the type
1547
+ can be/has been identified, for example,
1548
+ "note-in-proof"
1549
+ id Unique identifier so the element may be
1550
+ referenced -->
1551
+ <!ENTITY % notes-atts
1552
+ "id ID #IMPLIED
1553
+ notes-type CDATA #IMPLIED" >
1554
+
1555
+
1556
+ <!-- OBJECT IDENTIFIER ATTRIBUTES -->
1557
+ <!-- Attributes for the <object-id> element
1558
+ pub-id-type
1559
+ Publication (article) Identifier Type
1560
+ Names the type of identifier, or the
1561
+ organization or system that defined this
1562
+ identifier for the identifier of the journal
1563
+ article or a cited publication. This is an
1564
+ optional CDATA attribute that should be used
1565
+ whenever the type is known.
1566
+ Used on the <article-id> element, which
1567
+ holds an identifier for the entire article.
1568
+ Also used on the <pubid> element, which
1569
+ is an identifier for a publication cited in
1570
+ a bibliographic reference (citation).
1571
+ Suggested values include:
1572
+ coden - Obsolete PDB/CCDC identifier (may
1573
+ be present on older articles)
1574
+ doaj - Directory of Open Access Journals
1575
+ doi - Digital Object Identifier
1576
+ manuscript
1577
+ A manuscript
1578
+ medline- NLM Medline identifier
1579
+ other - None of the named identifiers
1580
+ pii - Publisher Item Identifier, see
1581
+ http://pubs.acs.org/epub/piius.htm
1582
+ or
1583
+ http://www.aip.org/epub/piipr.html
1584
+ pmid - PubMed Central identifier (see
1585
+ www.ncbi.nlm.nih.gov/entrez/
1586
+ query.fcgi?db=PubMed)
1587
+ publisher-id
1588
+ - Publisher's identifier such
1589
+ as an 'article-id', 'artnum',
1590
+ 'identifier', 'article- number',
1591
+ 'pub-id', etc.
1592
+ sici - Serial Item and Contribution
1593
+ Identifier (SICI). A journal
1594
+ article may have more than one
1595
+ SICI, one for a print version and
1596
+ one for an electronic version.
1597
+ content-type
1598
+ "content-type" attribute provides a way to
1599
+ preserve or add semantic distinctions -->
1600
+ <!ENTITY % object-id-atts
1601
+ "pub-id-type
1602
+ CDATA #IMPLIED
1603
+ content-type
1604
+ CDATA #IMPLIED" >
1605
+
1606
+
1607
+ <!-- PAGE RANGE ATTRIBUTES -->
1608
+ <!-- Attributes for the <page-range> element -->
1609
+ <!ENTITY % page-range-atts
1610
+ "content-type
1611
+ CDATA #IMPLIED" >
1612
+
1613
+
1614
+ <!-- PHONE ATTRIBUTES -->
1615
+ <!-- Attributes for the <phone> element -->
1616
+ <!ENTITY % phone-atts
1617
+ "content-type
1618
+ CDATA #IMPLIED" >
1619
+
1620
+
1621
+ <!-- PRICE ATTRIBUTES -->
1622
+ <!-- Attributes for the <price> element -->
1623
+ <!ENTITY % price-atts
1624
+ "currency CDATA #IMPLIED
1625
+ content-type
1626
+ CDATA #IMPLIED" >
1627
+
1628
+
1629
+ <!-- PUBLISHER ATTRIBUTES -->
1630
+ <!-- Attributes for the <publisher> element -->
1631
+ <!ENTITY % publisher-atts
1632
+ "content-type
1633
+ CDATA #IMPLIED" >
1634
+
1635
+
1636
+ <!-- RELATED ARTICLE ATTRIBUTES -->
1637
+ <!-- Attributes for <related-article>
1638
+ id Unique identifier so the element may be
1639
+ referenced
1640
+ alt-form-of
1641
+ Exactly like the "alt-form-of" attribute
1642
+ used with <graphic>, this is an IDREF
1643
+ attribute which points to the ID of another
1644
+ <related-article> in the same document
1645
+ rather than to an external file.
1646
+ related-article-type
1647
+ Describes how the related article is
1648
+ related to the current article. While any
1649
+ value may be used, suggested values include:
1650
+ addendum Additional material for an
1651
+ article, generated too late
1652
+ to be added to the main text
1653
+ commentary-article
1654
+ Used in an commentary or
1655
+ editorial to link to the
1656
+ article on which it is
1657
+ commenting
1658
+ companion Used in an article to link
1659
+ to a companion (related
1660
+ or sibling) article
1661
+ corrected-article
1662
+ Used in a correction to link
1663
+ to the article being
1664
+ corrected. Sometimes called
1665
+ erratum.
1666
+ in-this-issue Related article in the same
1667
+ journal issue
1668
+ letter A letter to the publication
1669
+ or a reply to such a
1670
+ letter
1671
+ commentary Used in an article to link
1672
+ to its associated commentary
1673
+ or editorial
1674
+ correction-forward
1675
+ Used in an article to link
1676
+ forward to its associated
1677
+ correction (rarely used)
1678
+ partial-retraction Partial retraction of
1679
+ previously published material
1680
+ retracted-article
1681
+ Used in a retraction to link
1682
+ to the article being retracted
1683
+ retraction-forward
1684
+ Used in an article to link
1685
+ forward to its associated
1686
+ retraction (rare)
1687
+ ext-link-type
1688
+ Type of external link used to point to the
1689
+ related article. Use this attribute
1690
+ if the type of external link is one of the
1691
+ ones below or another named type.
1692
+ Suggested values include:
1693
+ aoi Astronomical Object Identifier
1694
+ doi Digital Object Identifier
1695
+ ec Enzyme nomenclature - see
1696
+ http://www.chem.qmw.ac.uk/iubmb/enzyme/
1697
+ ftp File transfer protocol
1698
+ email An email address
1699
+ gen GenBank identifier
1700
+ genpept Translated Protein-encoding
1701
+ sequence Database
1702
+ highwire HighWire press intrajournal
1703
+ pdb Protein data bank. See
1704
+ http://www.rcsb.org/pdb/
1705
+ pgr Plant gene register. See
1706
+ http://www.tarweed.com/pgr/
1707
+ pir Protein Information Resource
1708
+ see http://pir.georgetown.edu
1709
+ pirdb Protein Information Resource
1710
+ see http://pir.georgetown.edu
1711
+ pmid PubMed identifier
1712
+ sprot Swiss-Prot. See
1713
+ http://www.ebi.ac.uk/swissprot/
1714
+ uri Website or web service
1715
+ The next five attributes are used to identify the
1716
+ journal in which the related article was published.
1717
+ vol Volume of the journal in which the related
1718
+ article exists. It is best practice to
1719
+ limit the scope to the current journal,
1720
+ the one in which the current article
1721
+ resides.
1722
+ page Page number of the related article. It is
1723
+ best practice to limit the scope to the
1724
+ current journal, the one in which the
1725
+ current article resides. The values for this
1726
+ attribute should be a first page or a page
1727
+ range.
1728
+ issue Issue number of the related article.
1729
+ journal-id Identifier for the journal which contains the
1730
+ related article.
1731
+ journal-id-type
1732
+ Indicates whose identifier this is, for
1733
+ example, "pub-id" for a publisher's
1734
+ identifier or "pmc" for PubMed Central.
1735
+ Suggested values include:
1736
+ archive Identifier assigned by an archive
1737
+ or other repository
1738
+ aggregator
1739
+ Identifier assigned by a data
1740
+ aggregator
1741
+ doi Digital Object Identifier for the
1742
+ entire journal, not just for the
1743
+ article (rare)
1744
+ index Identifier assigned by an
1745
+ abstracting or indexing service
1746
+ issn International Standard Serial Number
1747
+ of the journal in which the related
1748
+ article was published
1749
+ pmc Identifier assigned by PubMed
1750
+ Central, for example, a pmc journal
1751
+ abbreviation such as "pnas", "mbc",
1752
+ "nar", "molcellb", which may be the
1753
+ same as the abbreviated journal
1754
+ title
1755
+ publisher-id
1756
+ Identifier assigned by the content
1757
+ publisher, for example, "MOLEC",
1758
+ "MOLCEL"
1759
+ nlm-ta Identifier assigned by the
1760
+ PubMed/Medline, and is typically
1761
+ the journal abbreviation, for
1762
+ example, "Mol Biol Cell", "Nucleic
1763
+ Acids Res", which may be the
1764
+ same as the abbreviated journal
1765
+ title.
1766
+ xlink:href Provides an address or identifier of the
1767
+ object to which the link points, for
1768
+ example a URI or a filename. -->
1769
+ <!ENTITY % related-article-atts
1770
+ "id ID #IMPLIED
1771
+ alternate-form-of
1772
+ IDREF #IMPLIED
1773
+ related-article-type
1774
+ CDATA #REQUIRED
1775
+ ext-link-type
1776
+ CDATA #IMPLIED
1777
+ vol CDATA #IMPLIED
1778
+ page CDATA #IMPLIED
1779
+ issue CDATA #IMPLIED
1780
+ journal-id
1781
+ CDATA #IMPLIED
1782
+ %journal-id-atts;
1783
+ %might-link-atts;" >
1784
+
1785
+
1786
+ <!-- ROLE ATTRIBUTES -->
1787
+ <!-- Attributes for the <role> element -->
1788
+ <!ENTITY % role-atts
1789
+ "content-type
1790
+ CDATA #IMPLIED" >
1791
+
1792
+
1793
+ <!-- SEASON ATTRIBUTES -->
1794
+ <!-- Attributes for the <season> element -->
1795
+ <!ENTITY % season-atts
1796
+ "content-type
1797
+ CDATA #IMPLIED" >
1798
+
1799
+
1800
+ <!-- SIGNATURE ATTRIBUTES -->
1801
+ <!-- Attributes for the <sig> element -->
1802
+ <!ENTITY % sig-atts
1803
+ "content-type
1804
+ CDATA #IMPLIED" >
1805
+
1806
+
1807
+ <!-- SIGNATURE BLOCK ATTRIBUTES -->
1808
+ <!-- Attributes for the <sig-block> element -->
1809
+ <!ENTITY % sig-block-atts
1810
+ "id ID #IMPLIED
1811
+ content-type
1812
+ CDATA #IMPLIED" >
1813
+
1814
+
1815
+ <!-- SIZE ATTRIBUTES -->
1816
+ <!-- Attribute list for the <size> element -->
1817
+ <!-- units Required attribute to express the unit of
1818
+ measure in which the size (length) of a cited
1819
+ work is expressed, for example pages,
1820
+ minutes, seconds, linear feet, etc. -->
1821
+ <!ENTITY % size-atts
1822
+ "units CDATA #REQUIRED" >
1823
+
1824
+
1825
+ <!-- STRING DATE ATTRIBUTES -->
1826
+ <!-- Attributes for the <string-date> element -->
1827
+ <!ENTITY % string-date-atts
1828
+ "content-type
1829
+ CDATA #IMPLIED" >
1830
+
1831
+
1832
+ <!-- SUFFIX ATTRIBUTES -->
1833
+ <!-- Attributes for the <suffix> element -->
1834
+ <!ENTITY % suffix-atts
1835
+ "content-type
1836
+ CDATA #IMPLIED" >
1837
+
1838
+
1839
+ <!-- SURNAME ATTRIBUTES -->
1840
+ <!-- Attribute list for the <surname> element -->
1841
+ <!-- initials The initial(s) for the given names of the
1842
+ person. Particularly useful in those cases
1843
+ that cannot be algorithmically determined. -->
1844
+ <!ENTITY % surname-atts
1845
+ "initials CDATA #IMPLIED" >
1846
+
1847
+
1848
+ <!-- TITLE ATTRIBUTES -->
1849
+ <!-- Attributes for the <title> and similar
1850
+ elements -->
1851
+ <!ENTITY % title-atts
1852
+ "id ID #IMPLIED
1853
+ content-type
1854
+ CDATA #IMPLIED" >
1855
+
1856
+
1857
+ <!-- TRANSLATED TITLE ATTRIBUTES -->
1858
+ <!-- Attribute list for the <trans-title> and
1859
+ <trans-subtitle> elements -->
1860
+ <!ENTITY % trans-title-atts
1861
+ "id ID #IMPLIED
1862
+ content-type
1863
+ CDATA #IMPLIED
1864
+ xml:lang NMTOKEN #IMPLIED" >
1865
+
1866
+
1867
+ <!-- URI ATTRIBUTES -->
1868
+ <!-- Attributes for the <uri> element -->
1869
+ <!ENTITY % uri-atts
1870
+ "content-type
1871
+ CDATA #IMPLIED
1872
+ %might-link-atts;" >
1873
+
1874
+
1875
+ <!-- VOLUME NUMBER ATTRIBUTES -->
1876
+ <!-- Attribute list for the <volume> element -->
1877
+ <!-- seq Used to hold the sequence number or letter
1878
+ for journals which number articles from the
1879
+ start of the volume. -->
1880
+ <!ENTITY % volume-atts
1881
+ "seq CDATA #IMPLIED
1882
+ content-type
1883
+ CDATA #IMPLIED" >
1884
+
1885
+
1886
+ <!-- VOLUME IDENTIFIER ATTRIBUTES -->
1887
+ <!-- Attributes for the <volume-id> element -->
1888
+ <!-- pub-id-type
1889
+ Publication (article) Identifier Type
1890
+ Names the type of identifier, or the
1891
+ organization or system that defined this
1892
+ identifier for the identifier of the journal
1893
+ article or a cited publication. This is an
1894
+ optional CDATA attribute that should be used
1895
+ whenever the type is known.
1896
+ Used on the <article-id> element, which
1897
+ holds an identifier for the entire article.
1898
+ Also used on the <pubid> element, which
1899
+ is an identifier for a publication cited in
1900
+ a bibliographic reference (citation).
1901
+ Suggested values include:
1902
+ coden - Obsolete PDB/CCDC identifier (may
1903
+ be present on older articles)
1904
+ doaj - Directory of Open Access Journals
1905
+ doi - Digital Object Identifier
1906
+ manuscript
1907
+ - A manuscript
1908
+ medline- NLM Medline identifier
1909
+ other - None of the named identifiers
1910
+ pii - Publisher Item Identifier, see
1911
+ http://pubs.acs.org/epub/piius.htm
1912
+ or
1913
+ http://www.aip.org/epub/piipr.html
1914
+ pmid - PubMed Central identifier (see
1915
+ www.ncbi.nlm.nih.gov/entrez/
1916
+ query.fcgi?db=PubMed)
1917
+ publisher-id
1918
+ - Publisher's identifier such
1919
+ as an 'article-id', 'artnum',
1920
+ 'identifier', 'article- number',
1921
+ 'pub-id', etc.
1922
+ sici - Serial Item and Contribution
1923
+ Identifier (SICI). A journal
1924
+ article may have more than one
1925
+ SICI, one for a print version and
1926
+ one for an electronic version. -->
1927
+ <!ENTITY % volume-id-atts
1928
+ "pub-id-type
1929
+ CDATA #IMPLIED
1930
+ content-type
1931
+ CDATA #IMPLIED" >
1932
+
1933
+
1934
+ <!-- YEAR ATTRIBUTES -->
1935
+ <!-- Attributes for the <year> element -->
1936
+ <!ENTITY % year-atts
1937
+ "content-type
1938
+ CDATA #IMPLIED" >
1939
+
1940
+
1941
+ <!-- ============================================================= -->
1942
+ <!-- ELEMENT USED BY MORE THAN ONE CLASS -->
1943
+ <!-- ============================================================= -->
1944
+
1945
+
1946
+ <!-- ============================================================= -->
1947
+ <!-- SIGNATURE BLOCK ELEMENTS -->
1948
+ <!-- ============================================================= -->
1949
+
1950
+
1951
+ <!-- SIGNATURE BLOCK ELEMENTS -->
1952
+ <!-- Elements to be mixed with data characters
1953
+ inside the content model for the
1954
+ <sig-block> element. -->
1955
+ <!ENTITY % sig-block-elements
1956
+ "| %break.class; | %emphasis.class; |
1957
+ %inline-display.class; |
1958
+ %just-base-display.class; | %sig.class; |
1959
+ %subsup.class;" >
1960
+
1961
+
1962
+ <!-- SIGNATURE BLOCK -->
1963
+ <!-- An area of text and graphic material placed
1964
+ at the end of an article or section to hold
1965
+ the graphical signature or other description
1966
+ of the person responsible for or attesting
1967
+ to the content.
1968
+ Best Practice: Although a <sig-block> is
1969
+ allowed to contain all the same complexity
1970
+ as the Signature <sig>, to allow archives and
1971
+ publishers to capture a published signature
1972
+ block in any way it may have been constructed,
1973
+ best practice is to act as if the Signature
1974
+ Block contained the model (sig+) and build
1975
+ as much of the complexity as possible into
1976
+ the Signatures <sig>s.
1977
+ Remarks: This element was deliberately left
1978
+ out of the original NLM DTDs because analysis
1979
+ seemed to indicate that signature blocks
1980
+ merely duplicated information from the
1981
+ metadata and thus could be generated. However,
1982
+ further samples, especially in published
1983
+ books, have indicated that signature blocks
1984
+ are not as closely tied to contributor
1985
+ metadata as supposed and that a structure to
1986
+ hold signatory material would be useful for
1987
+ for previously published works. -->
1988
+ <!ELEMENT sig-block (#PCDATA %sig-block-elements;)* >
1989
+ <!-- id Unique identifier so the element may be
1990
+ referenced
1991
+ content-type
1992
+ "content-type" attribute provides a way to
1993
+ preserve or add semantic distinctions. -->
1994
+ <!ATTLIST sig-block
1995
+ %sig-block-atts; >
1996
+
1997
+
1998
+ <!-- SIGNATURE ELEMENTS -->
1999
+ <!-- Elements to be mixed with data characters
2000
+ inside the content model for the
2001
+ <sig> element. -->
2002
+ <!ENTITY % sig-elements "%rendition-plus; | %break.class; |
2003
+ %inline-display.class; |
2004
+ %just-base-display.class;" >
2005
+
2006
+
2007
+ <!-- SIGNATURE -->
2008
+ <!-- One contributor signature and associated
2009
+ material (such as a text restatement of the
2010
+ affiliation) inside a signature block.
2011
+ Typically contains the graphical signature or
2012
+ other description of the person responsible
2013
+ for or attesting to the content. -->
2014
+ <!ELEMENT sig (#PCDATA %sig-elements;)* >
2015
+ <!-- content-type
2016
+ "content-type" attribute provides a way to
2017
+ preserve or add semantic distinctions. -->
2018
+ <!ATTLIST sig
2019
+ %sig-atts; >
2020
+
2021
+
2022
+ <!-- ============================================================= -->
2023
+ <!-- COMMON COPYRIGHT/PERMISSION ELEMENTS -->
2024
+ <!-- ============================================================= -->
2025
+
2026
+
2027
+ <!-- COPYRIGHT HOLDER ELEMENTS -->
2028
+ <!-- Elements to be mixed with data characters
2029
+ inside the content model for the
2030
+ <copyright-holder> element. The elements
2031
+ subscript and superscript were included
2032
+ because the dot com revolution produced some
2033
+ rather unusual business names. -->
2034
+ <!ENTITY % copyright-holder-elements
2035
+ "| %subsup.class;" >
2036
+
2037
+
2038
+ <!-- COPYRIGHT HOLDER -->
2039
+ <!-- Name of the organizational or personal
2040
+ entity that holds the copyright.
2041
+ Remarks: There are three copyright elements,
2042
+ 1) The copyright statement, which is the
2043
+ textual statement of the copyright, worded
2044
+ in any way necessary, 2) the copyright
2045
+ year, pulled out of the statement for
2046
+ use in metadata searching and aggregation,
2047
+ and 3) the copyright holder, pulled out of
2048
+ the statement for the same reasons. -->
2049
+ <!ELEMENT copyright-holder
2050
+ (#PCDATA %copyright-holder-elements;)* >
2051
+ <!-- content-type
2052
+ "content-type" attribute provides a way to
2053
+ preserve or add semantic distinctions, for
2054
+ multiple copyright holders -->
2055
+ <!ATTLIST copyright-holder
2056
+ %copyright-holder-atts; >
2057
+
2058
+
2059
+ <!-- COPYRIGHT STATEMENT MODEL -->
2060
+ <!-- Content model for <copyright-statement> -->
2061
+ <!ENTITY % copyright-statement-elements
2062
+ "| %address-link.class; | %emphasis.class; |
2063
+ %subsup.class;" >
2064
+
2065
+
2066
+ <!-- COPYRIGHT STATEMENT -->
2067
+ <!-- Copyright notice or statement, suitable for
2068
+ printing or display. Within the statement the
2069
+ copyright year should be identified, if
2070
+ expected to be displayed. -->
2071
+ <!ELEMENT copyright-statement
2072
+ (#PCDATA %copyright-statement-elements;)* >
2073
+ <!-- content-type
2074
+ "content-type" attribute provides a way to
2075
+ preserve or add semantic distinctions, for
2076
+ multiple copyright statements -->
2077
+ <!ATTLIST copyright-statement
2078
+ %copyright-statement-atts; >
2079
+
2080
+
2081
+ <!-- COPYRIGHT YEAR -->
2082
+ <!-- Year of the copyright. Need not be used, if,
2083
+ for example, having the year as part of the
2084
+ copyright statement is sufficient.
2085
+ Note: since Copyright Statement is intended
2086
+ for display, Copyright Year is not expected
2087
+ to be displayed (but will be available for
2088
+ searching). -->
2089
+ <!ELEMENT copyright-year
2090
+ (#PCDATA) >
2091
+ <!-- "content-type" attribute provides a way to
2092
+ preserve or add semantic distinctions, for
2093
+ multiple copyright years -->
2094
+ <!ATTLIST copyright-year
2095
+ %copyright-year-atts; >
2096
+
2097
+
2098
+ <!-- LICENSE MODEL -->
2099
+ <!-- Content model for an <license> element -->
2100
+ <!ENTITY % license-model
2101
+ "((%just-para.class;)+)" >
2102
+
2103
+
2104
+ <!-- LICENSE INFORMATION -->
2105
+ <!-- The set of conditions under which people are
2106
+ allowed to use this article or other
2107
+ license-related information or restrictions.
2108
+ For now, this is a place-holder element
2109
+ that may change after the AIT Workgroup has
2110
+ done additional analysis -->
2111
+ <!ELEMENT license %license-model; >
2112
+ <!ATTLIST license
2113
+ %license-atts; >
2114
+
2115
+
2116
+ <!-- PERMISSIONS MODEL -->
2117
+ <!-- Model for <permissions> wrapper element -->
2118
+ <!ENTITY % permissions-model
2119
+ "(copyright-statement?, copyright-year?,
2120
+ copyright-holder?, license?)" >
2121
+
2122
+
2123
+ <!-- PERMISSIONS -->
2124
+ <!-- Wrapper element to hold the copyright
2125
+ information, license material, and any
2126
+ future similar metadata. -->
2127
+ <!ELEMENT permissions
2128
+ %permissions-model; >
2129
+
2130
+
2131
+ <!-- ============================================================= -->
2132
+ <!-- COMMON METADATA/BIBLIOGRAPHIC ELEMENTS -->
2133
+ <!-- ============================================================= -->
2134
+
2135
+
2136
+ <!-- ARTICLE TITLE -->
2137
+ <!-- The title of the article in the language
2138
+ in which the article was originally
2139
+ published
2140
+ Remarks: The related element Translated Title
2141
+ <trans-title> should be used for a
2142
+ translation of the article into another
2143
+ language, for example, to hold the English
2144
+ version of a Japanese article title. -->
2145
+ <!ELEMENT article-title
2146
+ (#PCDATA %title-elements;)* >
2147
+ <!-- xml:lang The language in which the value of the
2148
+ element is expressed. Recommended best
2149
+ practice is to use values as defined in
2150
+ RFC 1766, typically 2-letter language
2151
+ codes such as "FR" (French), "EN" (English),
2152
+ and "DE" (German). These values are NOT
2153
+ case sensitive, so "EN" = "en". The values
2154
+ may include hyphenated differentiations such
2155
+ as "EN-AU" (Australian English) and "EN-US"
2156
+ (United States English). -->
2157
+ <!ATTLIST article-title
2158
+ %article-title-atts; >
2159
+
2160
+
2161
+ <!-- AFFILIATION ELEMENTS -->
2162
+ <!-- Elements for use in the <aff> element -->
2163
+ <!ENTITY % aff-elements "| %address.class; | %address-link.class; |
2164
+ %article-link.class; | %break.class; |
2165
+ %emphasis.class; | %label.class; |
2166
+ %simple-link.class; | %subsup.class;" >
2167
+
2168
+
2169
+ <!-- AFFILIATION -->
2170
+ <!-- Name of a institution or organization such as
2171
+ a university or corporation.
2172
+ Authoring and Conversion Note: In a typical
2173
+ case, the "id" attribute will be pointed to
2174
+ by one or more contributors.
2175
+ Conversion Note: Any explicitly tagged numbers
2176
+ or symbols for author linkages should be
2177
+ discarded, as the linkage will be recreated
2178
+ from the "id" connection.
2179
+ Authoring Note: While this element
2180
+ contains an optional Label element, the
2181
+ Label element should be included only in
2182
+ those circumstances where a formatting
2183
+ override is needed; Label should NOT
2184
+ be used in the ordinary course of
2185
+ tagging. -->
2186
+ <!ELEMENT aff (#PCDATA %aff-elements;)* >
2187
+ <!-- id Unique identifier so that the affiliated
2188
+ institution may be referenced, for example
2189
+ by a contributor
2190
+ rid May be used to point to affiliation-related
2191
+ information within the document
2192
+ content-type
2193
+ "content-type" attribute provides a way to
2194
+ preserve or add semantic distinctions, for
2195
+ example, saying that this <aff> is the
2196
+ primary or only a secondary affiliation -->
2197
+ <!ATTLIST aff
2198
+ %aff-atts; >
2199
+
2200
+
2201
+ <!-- COLLABORATIVE (GROUP) AUTHOR ELEMENTS -->
2202
+ <!-- Elements for use in the <collab> element
2203
+ Design Note: All inline mixes begin with an
2204
+ OR bar, but since %simple-text; is an inline
2205
+ mix, the OR bar is already there.
2206
+ Design Note: All inline mixes begin with an
2207
+ OR bar, but since %simple-text; is an inline
2208
+ mix, the OR bar is already there. -->
2209
+ <!ENTITY % collab-elements
2210
+ "%simple-text; | %address-link.class; |
2211
+ %simple-link.class;" >
2212
+
2213
+
2214
+ <!-- COLLABORATIVE (GROUP) AUTHOR -->
2215
+ <!-- Used for groups of authors credited under
2216
+ one name, either as a collaboration in the
2217
+ strictest sense, or when an organization,
2218
+ institution, or corporation is the group.
2219
+ Remarks: When an author is an organization
2220
+ rather than a person, use the <collab>
2221
+ element rather than <surname>, for
2222
+ example:
2223
+ <collab>Aardvark Institute</collab>
2224
+ -->
2225
+ <!ELEMENT collab (#PCDATA %collab-elements;)* >
2226
+ <!-- collab-type
2227
+ The type or role of the collaborators,
2228
+ what function did they play in the
2229
+ publication.
2230
+ Suggested values include:
2231
+ assignee
2232
+ - Group or company to whom a patent
2233
+ is awarded
2234
+ authors - Content creators
2235
+ editors - Content editors
2236
+ compilers
2237
+ - Put together a composite work
2238
+ from multiple sources
2239
+ guest-editors
2240
+ - A group of editors that have been
2241
+ invited to edit all or part of a
2242
+ work
2243
+ inventors
2244
+ - Idea, software, or machine
2245
+ creators
2246
+ translators
2247
+ - Translated the cited work from
2248
+ one language into another
2249
+ one language into another
2250
+ id unique identifier so that the collaboration
2251
+ can be referenced
2252
+ xlink:href Provides an address or identifier of the
2253
+ object to which the link points, for
2254
+ example a URI or a filename. -->
2255
+ <!ATTLIST collab
2256
+ %collab-atts; >
2257
+
2258
+
2259
+ <!-- CONFERENCE DATE ELEMENTS -->
2260
+ <!-- Elements for use in the <conf-date> element-->
2261
+ <!ENTITY % conf-date-elements
2262
+ " " >
2263
+
2264
+
2265
+ <!-- CONFERENCE DATE -->
2266
+ <!-- The date(s) on which the conference was held.
2267
+ Conference dates in journal headers are
2268
+ traditionally stored in one of two forms:
2269
+ as a single date ("May 1906") or as the
2270
+ first day and last day of the conference.
2271
+ Both types should be stored in this element;
2272
+ the dates that come from separate first and
2273
+ last elements should be combined:
2274
+ <conf-start>August 4, 2002</conf-start>
2275
+ <conf-end>August 9, 2002<conf-end>
2276
+ should become:
2277
+ <conf-date>August 4, 2002 - August 9,
2278
+ 2002</conf-date>
2279
+ -->
2280
+ <!ELEMENT conf-date (#PCDATA %conf-date-elements;)* >
2281
+ <!-- content-type
2282
+ "content-type" attribute provides a way to
2283
+ preserve or add semantic distinctions, for
2284
+ multiple conference dates -->
2285
+ <!ATTLIST conf-date
2286
+ %conf-date-atts; >
2287
+
2288
+
2289
+ <!-- CONFERENCE LOCATION ELEMENTS -->
2290
+ <!-- Elements for use in the <conf-loc> element
2291
+ Design Note: All inline mixes begin with an
2292
+ OR bar, but since %simple-text; is an inline
2293
+ mix, the OR bar is already there. -->
2294
+ <!ENTITY % conf-loc-elements
2295
+ "%simple-text;" >
2296
+
2297
+
2298
+ <!-- CONFERENCE LOCATION -->
2299
+ <!-- The physical location(s) of the conference.
2300
+ This may include a city, a country, or a
2301
+ campus or organization location if that is
2302
+ the only location available.
2303
+ Authoring and Conversion Note: If the
2304
+ conference is in the United States, the
2305
+ state should also be provided. A specific
2306
+ venue or address (e.g. conference hotel)
2307
+ should not be provided unless there is no
2308
+ other location information. -->
2309
+ <!ELEMENT conf-loc (#PCDATA %conf-loc-elements;)* >
2310
+ <!-- content-type
2311
+ "content-type" attribute provides a way to
2312
+ preserve or add semantic distinctions, for
2313
+ multiple conference locations -->
2314
+ <!ATTLIST conf-loc
2315
+ %conf-loc-atts; >
2316
+
2317
+
2318
+ <!-- CONFERENCE NAME ELEMENTS -->
2319
+ <!-- Elements for use in the <conf-name> element.
2320
+ Design Note: All inline mixes begin with an
2321
+ OR bar, but since %simple-text; is an inline
2322
+ mix, the OR bar is already there. -->
2323
+ <!ENTITY % conf-name-elements
2324
+ "%simple-text;" >
2325
+
2326
+
2327
+ <!-- CONFERENCE NAME -->
2328
+ <!-- The full name of the conference, including any
2329
+ qualifiers such as "43rd Annual". When the
2330
+ name includes the year of the conference,
2331
+ (e.g. "Extreme 2002"), the year should appear
2332
+ in both the conference Name and the Conference
2333
+ Date elements. -->
2334
+ <!ELEMENT conf-name (#PCDATA %conf-name-elements;)* >
2335
+ <!-- content-type
2336
+ "content-type" attribute provides a way to
2337
+ preserve or add semantic distinctions, for
2338
+ multiple or successive conference names -->
2339
+ <!ATTLIST conf-name
2340
+ %conf-name-atts; >
2341
+
2342
+
2343
+ <!-- OBJECT IDENTIFIER -->
2344
+ <!-- Used to record an identifier such as a DOI
2345
+ for an interior element such as an <abstract>
2346
+ or <figure>.
2347
+ Remarks: Such an identifier may be created
2348
+ by a publisher or archive, and there is no
2349
+ requirement that identifiers be unique. -->
2350
+ <!ELEMENT object-id (#PCDATA) >
2351
+ <!-- pub-id-type
2352
+ Indicates what type of identifier this is or
2353
+ who assigned the identifier, for example,
2354
+ "pub-id" for a publisher's non-DOI
2355
+ identifier or "DOI" for a Digital Object
2356
+ Identifier.
2357
+ In Archival this is a CDATA attribute but
2358
+ suggested values include:
2359
+ archive Identifier assigned by an archive
2360
+ or other repository
2361
+ aggregator
2362
+ Assigned by a data aggregator
2363
+ doaj Directory of Open Access Journals
2364
+ doi Digital Object Identifier
2365
+ index Assigned by an abstracting or
2366
+ indexing service
2367
+ pmc Assigned by PubMed Central
2368
+ publisher-id
2369
+ Non-DOI Identifier assigned by
2370
+ the content publisher
2371
+ content-type
2372
+ "content-type" attribute provides a way to
2373
+ preserve or add semantic distinctions. -->
2374
+ <!ATTLIST object-id
2375
+ %object-id-atts; >
2376
+
2377
+
2378
+ <!-- ISSN ELEMENTS -->
2379
+ <!-- Elements for use with data characters inside
2380
+ the model for the <issue> element -->
2381
+ <!ENTITY % issn-elements
2382
+ " " >
2383
+
2384
+
2385
+ <!-- ISSN -->
2386
+ <!-- International Standard Serial Number -->
2387
+ <!ELEMENT issn (#PCDATA %issn-elements;) >
2388
+ <!-- Used to record the type of publication, for
2389
+ which this ISSN was issued, for example,
2390
+ a print-only publication versus
2391
+ an electronic-only publication, in any of
2392
+ several life stages.
2393
+ Suggested values include:
2394
+ epub - Electronic publication
2395
+ ppub - Print publication
2396
+ epub-ppub - Published in both print and
2397
+ electronic form
2398
+ epreprint - Electronic preprint
2399
+ dissemination
2400
+ ppreprint - Print preprint dissemination
2401
+ ecorrected - Corrected in electronic
2402
+ pcorrected - Corrected in print
2403
+ eretracted - Retracted in electronic
2404
+ pretracted - Retracted in print -->
2405
+ <!ATTLIST issn
2406
+ %issn-atts; >
2407
+
2408
+
2409
+ <!-- ISSUE TITLE ELEMENTS -->
2410
+ <!-- Elements for use with data characters inside
2411
+ the model for the <issue> element -->
2412
+ <!ENTITY % issue-elements
2413
+ "%just-rendition;" >
2414
+
2415
+
2416
+ <!-- ISSUE NUMBER -->
2417
+ <!-- NEW DEFINITION FOR RELEASE 2.0:
2418
+ The issue number, issue name, or other
2419
+ identifier of an issue of a journal that
2420
+ is displayed or printed with the issue.
2421
+ This is not the machine-readable internal
2422
+ identifier such as a DOI or SICI, that is
2423
+ the related element <issue-id> -->
2424
+ <!ELEMENT issue (#PCDATA %issue-elements;)* >
2425
+ <!-- seq Used to hold the sequence number or letter
2426
+ for journals in which articles are numbered
2427
+ from the start of the issue
2428
+ content-type
2429
+ "content-type" attribute provides a way to
2430
+ preserve or add semantic distinctions. -->
2431
+ <!ATTLIST issue
2432
+ %issue-atts; >
2433
+
2434
+
2435
+ <!-- ISSUE IDENTIFIER -->
2436
+ <!-- Used to record an identifier such as a DOI
2437
+ that describes an entire issue of a
2438
+ journal -->
2439
+ <!ELEMENT issue-id (#PCDATA) >
2440
+ <!-- pub-id-type
2441
+ Indicates what type of identifier this is or
2442
+ who assigned the identifier, for example,
2443
+ "pub-id" for a publisher's non-DOI
2444
+ identifier or "DOI" for a Digital Object
2445
+ Identifier.
2446
+ In Archival this is a CDATA attribute but
2447
+ suggested values include:
2448
+ archive Identifier assigned by an archive
2449
+ or other repository
2450
+ aggregator
2451
+ Assigned by a data aggregator
2452
+ doaj Directory of Open Access Journals
2453
+ doi Digital Object Identifier
2454
+ index Assigned by an abstracting or
2455
+ indexing service
2456
+ pmc Assigned by PubMed Central
2457
+ publisher-id
2458
+ Non-DOI Identifier assigned by
2459
+ the content publisher
2460
+ content-type
2461
+ "content-type" attribute provides a way to
2462
+ preserve or add semantic distinctions. -->
2463
+ <!ATTLIST issue-id
2464
+ %issue-id-atts; >
2465
+
2466
+
2467
+ <!-- ISSUE TITLE ELEMENTS -->
2468
+ <!-- Elements for use in the <issue-title> element
2469
+ -->
2470
+ <!ENTITY % issue-title-elements
2471
+ "" >
2472
+
2473
+
2474
+ <!-- ISSUE TITLE -->
2475
+ <!-- Used to record the theme or special issue
2476
+ title for an issue of the journal -->
2477
+ <!ELEMENT issue-title (#PCDATA %issue-title-elements;)* >
2478
+ <!-- content-type
2479
+ "content-type" attribute provides a way to
2480
+ preserve or add semantic distinctions. -->
2481
+ <!ATTLIST issue-title
2482
+ %issue-title-atts; >
2483
+
2484
+
2485
+ <!-- JOURNAL IDENTIFIER -->
2486
+ <!-- Short code that represents the journal; used
2487
+ as an alternative to or short form of the
2488
+ journal title; used for identification of
2489
+ the journal domain.
2490
+ Authoring Note (PMC-only):
2491
+ The PMC identifiers come from an
2492
+ authorized list, so that each journal
2493
+ code is unique in the PMC system. The PMC
2494
+ identifier is the PMC short abbreviation of
2495
+ the journal title, used to identify the
2496
+ journal domain. -->
2497
+ <!ELEMENT journal-id (#PCDATA) >
2498
+ <!-- journal-id-type
2499
+ Indicates whose identifier this is, for
2500
+ example, "pub-id" for a publisher's
2501
+ identifier or "pmc" for PubMed Central.
2502
+ Suggested values include:
2503
+ F archive Identifier assigned by an archive
2504
+ or other repository
2505
+ aggregator
2506
+ Identifier assigned by a data
2507
+ aggregator
2508
+ doaj Directory of Open Access Journals
2509
+ doi Digital Object Identifier for the
2510
+ entire journal, not just for the
2511
+ article (rare)
2512
+ index Identifier assigned by an
2513
+ abstracting or indexing service
2514
+ pmc Identifier assigned by PubMed
2515
+ Central, for example, a pmc journal
2516
+ abbreviation such as "pnas", "mbc",
2517
+ "nar", "molcellb", which may be the
2518
+ same as the abbreviated journal
2519
+ title
2520
+ publisher-id
2521
+ Identifier assigned by the content
2522
+ publisher, for example, "MOLEC",
2523
+ "MOLCEL"
2524
+ nlm-ta Identifier assigned by the
2525
+ PubMed/Medline, and is typically
2526
+ the journal abbreviation, for
2527
+ example, "Mol Biol Cell", "Nucleic
2528
+ Acids Res", which may be the
2529
+ same as the abbreviated journal
2530
+ title.
2531
+ issn International Standard Serial Number
2532
+ of the journal in which the related
2533
+ article was published -->
2534
+ <!ATTLIST journal-id
2535
+ %journal-id-atts; >
2536
+
2537
+
2538
+ <!-- ROLE ELEMENTS -->
2539
+ <!-- The elements that can be included along with
2540
+ data characters inside the content model of
2541
+ a <role>
2542
+ Design Note: All inline mixes begin with an
2543
+ OR bar; since %rendition-plus; is an
2544
+ inline mix, the OR bar is already there. -->
2545
+ <!ENTITY % role-elements
2546
+ "%rendition-plus;" >
2547
+
2548
+
2549
+ <!-- ROLE OR FUNCTION TITLE OF CONTRIBUTOR -->
2550
+ <!-- A title or the role of a contributor
2551
+ (such as an author) in this work. For example,
2552
+ Editor-in-Chief, Contributor, Chief
2553
+ Scientist, Photographer, Research Associate,
2554
+ etc.
2555
+ Remarks: Information on the role or type of
2556
+ contribution is collected in two places,
2557
+ in the "contrib-type" attribute on the
2558
+ Contributor element and in the Role element.
2559
+ For example, the Contributor attribute might
2560
+ have a value of "editor", while the content
2561
+ of the role element could be "Associate
2562
+ Editor". As another example, the contributor
2563
+ attribute might be "author" and the role
2564
+ element might be "Principle Author".
2565
+ The <role> element is also more likely to
2566
+ appear on screen or in print than the
2567
+ contributor attribute value. -->
2568
+ <!ELEMENT role (#PCDATA %role-elements;)* >
2569
+ <!-- content-type
2570
+ "content-type" attribute provides a way to
2571
+ preserve or add semantic distinctions. -->
2572
+ <!ATTLIST role
2573
+ %role-atts; >
2574
+
2575
+
2576
+ <!-- TRANSLATED SUBTITLE -->
2577
+ <!-- An alternate version of an article subtitle
2578
+ that has been translated out of the original
2579
+ language of the article subtitle <subtitle>
2580
+ Remarks: The related element <subtitle>
2581
+ should be used for the subtitle of the
2582
+ article in the original language in
2583
+ which it was published. This translated
2584
+ subtitle is used for a translation of the
2585
+ original subtitle, for example an English
2586
+ version of a Japanese subtitle -->
2587
+ <!ELEMENT trans-subtitle
2588
+ (#PCDATA %title-elements;)* >
2589
+ <!-- xml:lang The language in which the value of the
2590
+ element is expressed. Recommended best
2591
+ practice is to use values as defined in
2592
+ RFC 1766, typically 2-letter language
2593
+ codes such as "FR" (French), "EN" (English),
2594
+ and "DE" (German). These values are NOT
2595
+ case sensitive, so "EN" = "en". The values
2596
+ may include hyphenated differentiations such
2597
+ as "EN-AU" (Australian English) and "EN-US"
2598
+ (United States English).
2599
+ Authoring and Conversion Note: For the
2600
+ Translated Title element, the xml:lang
2601
+ attribute should always be set if the
2602
+ value is known. The only reason the
2603
+ attribute was not made #REQUIRED was that
2604
+ there may be cases where the language is
2605
+ not known.
2606
+ content-type
2607
+ "content-type" attribute provides a way to
2608
+ preserve or add semantic distinctions. -->
2609
+ <!ATTLIST trans-subtitle
2610
+ %trans-title-atts; >
2611
+
2612
+
2613
+ <!-- TRANSLATED TITLE -->
2614
+ <!-- An alternate version of the title that has
2615
+ been translated into a language other than
2616
+ that of the original article title
2617
+ <article-title>
2618
+ Remarks: The related element Article Title
2619
+ <article-title> should be used for the title
2620
+ of the article in the original language in
2621
+ which it was published. This element is used
2622
+ for a translation of that title, for example
2623
+ the English version of a Japanese article. -->
2624
+ <!ELEMENT trans-title (#PCDATA %title-elements;)* >
2625
+ <!-- xml:lang The language in which the value of the
2626
+ element is expressed. Recommended best
2627
+ practice is to use values as defined in
2628
+ RFC 1766, typically 2-letter language
2629
+ codes such as "FR" (French), "EN" (English),
2630
+ and "DE" (German). These values are NOT
2631
+ case sensitive, so "EN" = "en". The values
2632
+ may include hyphenated differentiations such
2633
+ as "EN-AU" (Australian English) and "EN-US"
2634
+ (United States English).
2635
+ Authoring and Conversion Note: For the
2636
+ Translated Title element, the xml:lang
2637
+ attribute should always be set if the
2638
+ value is known. The only reason the
2639
+ attribute was not made #REQUIRED was that
2640
+ there may be cases where the language is
2641
+ not known.
2642
+ content-type
2643
+ "content-type" attribute provides a way to
2644
+ preserve or add semantic distinctions. -->
2645
+ <!ATTLIST trans-title
2646
+ %trans-title-atts; >
2647
+
2648
+
2649
+ <!-- VOLUME NUMBER ELEMENTS -->
2650
+ <!-- The elements that can be included along with
2651
+ data characters inside the content model of
2652
+ a <volume> -->
2653
+ <!ENTITY % volume-elements
2654
+ "%just-rendition; " >
2655
+
2656
+
2657
+ <!-- VOLUME NUMBER -->
2658
+ <!-- NEW DEFINITION FOR RELEASE 2.0:
2659
+ The volume number, volume name, or other
2660
+ identifier of an volume of a journal that
2661
+ is displayed or printed with the volume.
2662
+ This is not the machine-readable internal
2663
+ identifier such as a DOI or SICI, that is
2664
+ the related element <volume-id> -->
2665
+ <!ELEMENT volume (#PCDATA %volume-elements;)* >
2666
+ <!-- seq Used to hold the sequence number or letter
2667
+ for journals in which articles are numbered
2668
+ from the start of the volume
2669
+ content-type
2670
+ "content-type" attribute provides a way to
2671
+ preserve or add semantic distinctions. -->
2672
+ <!ATTLIST volume
2673
+ %volume-atts; >
2674
+
2675
+
2676
+ <!-- VOLUME IDENTIFIER ELEMENTS -->
2677
+ <!-- The elements that can be included along with
2678
+ data characters inside the content model of
2679
+ a <volume-id> -->
2680
+ <!ENTITY % volume-id-elements
2681
+ "%just-rendition; " >
2682
+
2683
+
2684
+ <!-- VOLUME IDENTIFIER -->
2685
+ <!-- Used to record an identifier such as a DOI
2686
+ that describes an entire volume of a
2687
+ journal.
2688
+ Remarks: The related elements <volume>
2689
+ holds the volume number as published
2690
+ with the journal. -->
2691
+ <!ELEMENT volume-id (#PCDATA %volume-id-elements;)* >
2692
+ <!-- pub-id-type
2693
+ Indicates what type of identifier this is or
2694
+ who assigned the identifier, for example,
2695
+ "pub-id" for a publisher's non-DOI
2696
+ identifier or "DOI" for a Digital Object
2697
+ Identifier.
2698
+ In Archival this is a CDATA attribute but
2699
+ suggested values include:
2700
+ archive Identifier assigned by an archive
2701
+ or other repository
2702
+ aggregator
2703
+ Assigned by a data aggregator
2704
+ doaj Directory of Open Access Journals
2705
+ doi Digital Object Identifier
2706
+ index Assigned by an abstracting or
2707
+ indexing service
2708
+ pmc Assigned by PubMed Central
2709
+ publisher-id
2710
+ Non-DOI Identifier assigned by
2711
+ the content publisher
2712
+ content-type
2713
+ "content-type" attribute provides a way to
2714
+ preserve or add semantic distinctions. -->
2715
+ <!ATTLIST volume-id
2716
+ %volume-id-atts; >
2717
+
2718
+
2719
+ <!-- ============================================================= -->
2720
+ <!-- COMMON METADATA ELEMENTS CONTINUED -->
2721
+ <!-- PUBLISHER IDENTIFICATION ELEMENTS -->
2722
+ <!-- (COMMON ARTICLE METADATA/BIBLIOGRAPHIC) -->
2723
+ <!-- Used in article metadata and also inside -->
2724
+ <!-- a bibliographic reference (citation) -->
2725
+ <!-- ============================================================= -->
2726
+
2727
+
2728
+ <!-- ANONYMOUS ELEMENTS -->
2729
+ <!-- The elements that can be included along with
2730
+ data characters inside the content model of
2731
+ an <anonymous> element -->
2732
+ <!ENTITY % anonymous-elements
2733
+ "%just-rendition;" >
2734
+
2735
+
2736
+ <!-- ANONYMOUS CONTENT MODEL -->
2737
+ <!-- The content model for the <etal> element -->
2738
+ <!ENTITY % anonymous-model
2739
+ "(#PCDATA %anonymous-elements;)*" >
2740
+
2741
+
2742
+ <!-- ANONYMOUS -->
2743
+ <!-- Place holder for the name of a contributor
2744
+ whose name is unknown or not disclosed.
2745
+ Design Note: Most journal tag sets model
2746
+ this as an EMPTY element, typically used to
2747
+ generate text such as "anon.". However, a few
2748
+ journal tag sets expect content for this
2749
+ element, with such text as
2750
+ "Anonymous but assumed to be Francis Bacon".
2751
+ Therefore (as implemented in Version 2.3) this
2752
+ is an EMPTY element in the more prescriptive
2753
+ DTDs (Publishing, Authoring) and a #PCDATA
2754
+ element in Archiving and Book, where it
2755
+ may be necessary to preserve content -->
2756
+ <!ELEMENT anonymous %anonymous-model; >
2757
+
2758
+
2759
+ <!-- ET AL ELEMENTS -->
2760
+ <!-- The elements that can be included along with
2761
+ data characters inside the content model of
2762
+ an <etal> element -->
2763
+ <!ENTITY % etal-elements
2764
+ "%just-rendition;" >
2765
+
2766
+
2767
+ <!-- ET AL CONTENT MODEL -->
2768
+ <!-- The content model for the <etal> element -->
2769
+ <!ENTITY % etal-model "(#PCDATA %etal-elements;)*" >
2770
+
2771
+
2772
+ <!-- ET AL -->
2773
+ <!-- Most journals model this as an EMPTY element,
2774
+ typically used to generate the text "et al."
2775
+ from a stylesheet. However, a few journal
2776
+ DTDs (Blackwell's, for example) expect
2777
+ content for this element, with such text as
2778
+ "Associates, coworkers, and colleagues".
2779
+ Note: Therefore (as of Version 2.0, this is
2780
+ an EMPTY element in the more prescriptive DTD
2781
+ Publishing, a #PCDATA element in Archiving,
2782
+ and not used at all in the Authoring DTD. -->
2783
+ <!ELEMENT etal %etal-model; >
2784
+
2785
+
2786
+ <!-- PUBLISHER CONTENT MODEL -->
2787
+ <!-- The content model for the <publisher>
2788
+ element -->
2789
+ <!ENTITY % publisher-model
2790
+ "(publisher-name, publisher-loc?)" >
2791
+
2792
+
2793
+ <!-- PUBLISHER -->
2794
+ <!-- Who published the work -->
2795
+ <!ELEMENT publisher %publisher-model; >
2796
+ <!-- seq Used for sequence number or letter for
2797
+ content-type
2798
+ "content-type" attribute provides a way to
2799
+ preserve or add semantic distinctions -->
2800
+ <!ATTLIST publisher
2801
+ %publisher-atts; >
2802
+
2803
+
2804
+ <!-- PUBLISHER'S NAME ELEMENTS -->
2805
+ <!-- The elements that can be included along with
2806
+ data characters inside the content model of
2807
+ a <publisher-name>
2808
+ Design Note: All inline mixes begin with an
2809
+ OR bar; since %just-rendition; is an
2810
+ inline mix, the OR bar is already there -->
2811
+ <!ENTITY % publisher-name-elements
2812
+ "%just-rendition; " >
2813
+
2814
+
2815
+ <!-- PUBLISHER'S NAME -->
2816
+ <!-- Name of the publisher of the work -->
2817
+ <!ELEMENT publisher-name
2818
+ (#PCDATA %publisher-name-elements;)* >
2819
+
2820
+
2821
+ <!-- PUBLISHER'S LOCATION ELEMENTS -->
2822
+ <!-- Elements for use in the Publisher Location
2823
+ <publisher-loc> element -->
2824
+ <!ENTITY % publisher-loc-elements
2825
+ "| %address.class; | %address-link.class; |
2826
+ %emphasis.class; | %subsup.class;" >
2827
+
2828
+
2829
+ <!-- PUBLISHER'S LOCATION -->
2830
+ <!-- Place of publication, usually a city such
2831
+ as New York or London -->
2832
+ <!ELEMENT publisher-loc
2833
+ (#PCDATA %publisher-loc-elements;)* >
2834
+
2835
+
2836
+ <!-- ============================================================= -->
2837
+ <!-- COMMON METADATA ELEMENTS CONTINUED -->
2838
+ <!-- PAGE NUMBERING (SIZE) ELEMENTS -->
2839
+ <!-- ============================================================= -->
2840
+
2841
+
2842
+ <!-- FIRST PAGE -->
2843
+ <!-- The page number on which the article starts,
2844
+ for print journals that have page numbers -->
2845
+ <!ELEMENT fpage (#PCDATA) >
2846
+ <!-- seq Used for sequence number or letter for
2847
+ journals (such as continuous makeup journals)
2848
+ with more than one article starting on the
2849
+ same page
2850
+ content-type
2851
+ "content-type" attribute provides a way to
2852
+ preserve or add semantic distinctions -->
2853
+ <!ATTLIST fpage
2854
+ %fpage-atts; >
2855
+
2856
+
2857
+ <!-- LAST PAGE -->
2858
+ <!-- The page number on which the article ends,
2859
+ for print journals that have page numbers -->
2860
+ <!ELEMENT lpage (#PCDATA) >
2861
+ <!-- content-type
2862
+ "content-type" attribute provides a way to
2863
+ preserve or add semantic distinctions. -->
2864
+ <!ATTLIST lpage
2865
+ %lpage-atts; >
2866
+
2867
+
2868
+ <!-- PAGE RANGES -->
2869
+ <!-- A container element for additional page
2870
+ information (TO BE USED TO SUPPLEMENT AND
2871
+ NOT TO REPLACE <fpage> and <lpage>) to record
2872
+ discontinuous pages ranges such as
2873
+ "8-11, 14-19, 40"
2874
+ meaning that the article begins on page
2875
+ 8, runs 8 through 11, skips to pages 14
2876
+ through 19, and concludes on page 40. -->
2877
+ <!ELEMENT page-range (#PCDATA) >
2878
+ <!-- content-type
2879
+ "content-type" attribute provides a way to
2880
+ preserve or add semantic distinctions. -->
2881
+ <!ATTLIST page-range
2882
+ %page-range-atts; >
2883
+
2884
+
2885
+ <!-- SIZE -->
2886
+ <!-- The size (such as running time, page count,
2887
+ or physical measurements) of the object being
2888
+ described, usually by a <product> element.
2889
+ The "units" attribute must be used to name
2890
+ the unit of measure (pages, minutes, hours,
2891
+ linear feet, etc.).
2892
+ Best Practice Note: In the metadata for an
2893
+ article, the element <page-count> contains
2894
+ the total number of pages. In a <product>
2895
+ description, this information should be
2896
+ recorded using the <size> element, which can
2897
+ also be used for running time and other
2898
+ other measurements of size/length. Thus best
2899
+ practice does not use <page-count>
2900
+ inside <product>.
2901
+ Related Elements: Within a bibliographic
2902
+ reference <citation>, the element
2903
+ <page-count> contains similar information for
2904
+ printed material such as a book. The element
2905
+ <size> is not used inside <citation>s.
2906
+ -->
2907
+ <!ELEMENT size (#PCDATA) >
2908
+ <!-- units Required attribute to express the unit of
2909
+ measure in which the size (length) of a cited
2910
+ work is expressed, for example pages,
2911
+ minutes, seconds, linear feet, etc. -->
2912
+ <!ATTLIST size
2913
+ %size-atts; >
2914
+
2915
+
2916
+ <!-- ELECTRONIC LOCATION IDENTIFIER -->
2917
+ <!-- Used to identify an article that
2918
+ does not have traditional page numbers.
2919
+ For a printed article, when citations are
2920
+ sent through the Medline matcher to be turned
2921
+ into live links or when the metadata about an
2922
+ article is collected for complete
2923
+ identification, the first page number (and
2924
+ sometimes also the last page number) of the
2925
+ article is recorded to help indicate which
2926
+ article is being referenced. Electronic only
2927
+ journals have no page numbers, so this
2928
+ element is used as the equivalent identifier,
2929
+ the "electronic page number" that helps to
2930
+ identify the article. The value could be an
2931
+ article identifier, a doi, etc., for
2932
+ example, "E70".
2933
+ Remarks: This element is more accurately an
2934
+ electronic identifier, and it was considered
2935
+ renaming this element to that. The purpose
2936
+ of the name is to be a parallel with the
2937
+ <fpage>...<lpage> model. When neither first
2938
+ page or last page is appropriate, because
2939
+ the electronic journal has no pages, the
2940
+ <elocation-id> element is used instead. -->
2941
+ <!ELEMENT elocation-id (#PCDATA) >
2942
+ <!-- seq Used for sequence number or letter for
2943
+ journals (such as continuous makeup journals)
2944
+ with more than one article starting on the
2945
+ same page -->
2946
+ <!ATTLIST elocation-id
2947
+ %elocation-id-atts; >
2948
+
2949
+
2950
+ <!-- ============================================================= -->
2951
+ <!-- CONTRACT/GRANT INFORMATION ELEMENTS -->
2952
+ <!-- ============================================================= -->
2953
+
2954
+
2955
+ <!-- CONTRACT NUMBER ELEMENTS -->
2956
+ <!-- The elements that can be included along with
2957
+ data characters inside the content model of
2958
+ the contract number.
2959
+ Design Note: All inline mixes begin with an
2960
+ OR bar, but since %simple-text; is an inline
2961
+ mix, the OR bar is already there. -->
2962
+ <!ENTITY % contract-elements
2963
+ "%simple-text;" >
2964
+
2965
+
2966
+ <!-- CONTRACT NUMBER -->
2967
+ <!-- Contract number of the supported work that is
2968
+ described in the article.
2969
+ Authoring Conversion Note: If an acronym of
2970
+ the sponsor is available, it should be
2971
+ inserted before the number. -->
2972
+ <!ELEMENT contract-num
2973
+ (#PCDATA %contract-elements;)* >
2974
+ <!-- id Unique identifier, so the contributor can be
2975
+ referenced
2976
+ rid May be used to point to, for example, link
2977
+ contract numbers and sponsors
2978
+ content-type
2979
+ "content-type" attribute provides a way to
2980
+ preserve or add semantic distinctions
2981
+ xlink:href Provides an address or identifier of the
2982
+ object to which the link points, for
2983
+ example a URI or a filename associated with
2984
+ a grant or sponsor -->
2985
+ <!ATTLIST contract-num
2986
+ %contract-atts; >
2987
+
2988
+
2989
+ <!-- CONTRACT SPONSOR ELEMENTS -->
2990
+ <!-- The elements that can be included along with
2991
+ data characters inside the content model of
2992
+ the contract sponsor.
2993
+ Design Note: All inline mixes begin with an
2994
+ OR bar, but since %simple-text; is an online
2995
+ mix, the OR bar is already there. -->
2996
+ <!ENTITY % contract-sponsor-elements
2997
+ "%simple-text;" >
2998
+
2999
+
3000
+ <!-- CONTRACT SPONSOR -->
3001
+ <!-- Name of the organization that sponsored the
3002
+ work described in the article. -->
3003
+ <!ELEMENT contract-sponsor
3004
+ (#PCDATA %contract-sponsor-elements;)* >
3005
+ <!-- id Unique identifier, so the contributor can be
3006
+ referenced
3007
+ rid May be used to point to, for example, link
3008
+ contract numbers and sponsors
3009
+ content-type
3010
+ "content-type" attribute provides a way to
3011
+ preserve or add semantic distinctions
3012
+ xlink:href Provides an address or identifier of the
3013
+ object to which the link points, for
3014
+ example a URI or a filename associated with
3015
+ a grant or sponsor -->
3016
+ <!ATTLIST contract-sponsor
3017
+ %contract-atts; >
3018
+
3019
+
3020
+ <!-- GRANT NUMBER ELEMENTS -->
3021
+ <!-- The elements that can be included along with
3022
+ data characters inside the content model of
3023
+ the grant number.
3024
+ Design Note: All inline mixes begin with an
3025
+ OR bar, but since %simple-text; is an inline
3026
+ mix, the OR bar is already there. -->
3027
+ <!ENTITY % grant-elements
3028
+ "%simple-text;" >
3029
+
3030
+
3031
+ <!-- GRANT NUMBER -->
3032
+ <!-- Grant number of the supported work that is
3033
+ described in the article.
3034
+ Authoring Conversion Note: If an acronym of
3035
+ the grant sponsor is available, it should be
3036
+ inserted before the number. -->
3037
+ <!ELEMENT grant-num (#PCDATA %grant-elements;)* >
3038
+ <!-- id Unique identifier, so the contributor can be
3039
+ referenced
3040
+ rid May be used to point to, for example, link
3041
+ contract numbers and sponsors
3042
+ content-type
3043
+ "content-type" attribute provides a way to
3044
+ preserve or add semantic distinctions
3045
+ xlink:href Provides an address or identifier of the
3046
+ object to which the link points, for
3047
+ example a URI or a filename associated with
3048
+ a grant or sponsor -->
3049
+ <!ATTLIST grant-num
3050
+ %contract-atts; >
3051
+
3052
+
3053
+ <!-- GRANT SPONSOR ELEMENTS -->
3054
+ <!-- The elements that can be included along with
3055
+ data characters inside the content model of
3056
+ the grant sponsor.
3057
+ Design Note: All inline mixes begin with an
3058
+ OR bar, but since %simple-text; is an online
3059
+ mix, the OR bar is already there. -->
3060
+ <!ENTITY % grant-sponsor-elements
3061
+ "%simple-text;" >
3062
+
3063
+
3064
+ <!-- GRANT SPONSOR -->
3065
+ <!-- Name of the organization that sponsored the
3066
+ grant that supported the work that is
3067
+ described in the article. -->
3068
+ <!ELEMENT grant-sponsor
3069
+ (#PCDATA %grant-sponsor-elements;)* >
3070
+ <!-- id Unique identifier, so the contributor can be
3071
+ referenced
3072
+ rid May be used to point to, for example, link
3073
+ contract numbers and sponsors
3074
+ content-type
3075
+ "content-type" attribute provides a way to
3076
+ preserve or add semantic distinctions
3077
+ xlink:href Provides an address or identifier of the
3078
+ object to which the link points, for
3079
+ example a URI or a filename associated with
3080
+ a grant or sponsor -->
3081
+ <!ATTLIST grant-sponsor
3082
+ %contract-atts; >
3083
+
3084
+
3085
+ <!-- ============================================================= -->
3086
+ <!-- CITATION (BIBLIOGRAPHIC REFERENCE) -->
3087
+ <!-- ============================================================= -->
3088
+
3089
+
3090
+ <!-- CITATION ELEMENTS -->
3091
+ <!-- Content model for the <citation> element.
3092
+ Design Note: All inline mixes begin with an
3093
+ OR bar. -->
3094
+ <!ENTITY % citation-elements
3095
+ "| %emphasis.class; | %inline-display.class; |
3096
+ %inline-math.class; | %label.class; |
3097
+ %phrase.class; | %references.class; |
3098
+ %subsup.class;" >
3099
+
3100
+
3101
+ <!-- CITATION -->
3102
+ <!-- A citation is a description of a work, such
3103
+ as a journal article, book, or personal
3104
+ communication, that is cited in the text of
3105
+ the article. Although the DTD does not
3106
+ enforce it, a citation to a journal article
3107
+ *should* be tagged with as many as possible
3108
+ of the following, so that PubMed Central or
3109
+ other matching processing can make the
3110
+ citation into a live link:
3111
+ source The MEDLINE abbreviation of the
3112
+ journal name
3113
+ article-title
3114
+ Title of the article
3115
+ volume Volume of the journal
3116
+ issue Issue of the journal
3117
+ fpage Page number on which the article
3118
+ starts
3119
+ name Of an author or editor
3120
+ year Year of publication
3121
+ month Month of publication (if present)
3122
+ day Date of publication (if present)
3123
+ The other elements may be tagged if
3124
+ desired. The <title> element may be used
3125
+ for titles of books, conference proceedings,
3126
+ etc.
3127
+ Authoring and Conversion Note: In order to
3128
+ make citations into live links, as much
3129
+ of the author and date information as is
3130
+ available should be preserved. The most
3131
+ important date tag is year, and it should
3132
+ always be tagged if possible:
3133
+ <year>2003</year>
3134
+ The <day> and <month> tags will be used
3135
+ more rarely; they are provided because some
3136
+ of the citation matching services can use
3137
+ the month and the day if they are available.
3138
+ -->
3139
+ <!ELEMENT citation (#PCDATA %citation-elements;)* >
3140
+ <!-- citation-type
3141
+ Defines the type of work being referenced.
3142
+ Suggested values include:
3143
+ book Book
3144
+ commun Informal or personal
3145
+ communication, such as a
3146
+ phone call or an email
3147
+ message
3148
+ confproc Conference proceedings
3149
+ discussion Discussion among a group in
3150
+ some forum - public, private,
3151
+ or electronic, which may or
3152
+ may not be moderated
3153
+ gov Government publication
3154
+ journal Journal article
3155
+ list Listserv
3156
+ other None of the listed types
3157
+ patent Patent or patent application
3158
+ thesis Work written as part of the
3159
+ completion of an advanced
3160
+ degree
3161
+ web Website
3162
+ id Unique identifier so the element may be
3163
+ referenced
3164
+ xlink:href Provides an address or identifier of the
3165
+ object to which the link points, for
3166
+ example a URI or a filename -->
3167
+ <!ATTLIST citation
3168
+ %citation-atts; >
3169
+
3170
+
3171
+ <!-- ============================================================= -->
3172
+ <!-- ADDRESS ELEMENTS (BIBLIOGRAPHIC) -->
3173
+ <!-- ============================================================= -->
3174
+
3175
+
3176
+ <!-- ADDRESS MODEL -->
3177
+ <!-- Content model for the <address> element -->
3178
+ <!ENTITY % address-model
3179
+ "(%address.class; | %address-link.class;)*" >
3180
+
3181
+
3182
+ <!-- ADDRESS/CONTACT INFORMATION -->
3183
+ <!-- Wrapper element for contact information such
3184
+ as address, phone, fax, email, url, country,
3185
+ etc. -->
3186
+ <!ELEMENT address %address-model; >
3187
+ <!-- id Unique identifier so the element may be
3188
+ referenced
3189
+ content-type
3190
+ "type" attributes provide a way to preserve
3191
+ or add semantic distinctions, for example,
3192
+ saying that this <address> is the sabbatical
3193
+ address of an author usually at a primary
3194
+ address (also given and typed). -->
3195
+ <!ATTLIST address
3196
+ %address-atts; >
3197
+
3198
+
3199
+ <!-- ADDRESS LINE ELEMENTS -->
3200
+ <!-- Elements for use in the <addr-line> element-->
3201
+ <!ENTITY % addr-line-elements
3202
+ "%simple-text;" >
3203
+
3204
+
3205
+ <!-- ADDRESS LINE -->
3206
+ <!-- One line in an address -->
3207
+ <!-- Conversion Note: If the address is
3208
+ undifferentiated data characters, the entire
3209
+ address may be inside one of these elements.
3210
+ -->
3211
+ <!ELEMENT addr-line (#PCDATA %addr-line-elements;)* >
3212
+ <!-- content-type
3213
+ "content-type" attributes provide a way to
3214
+ preserve or add semantic distinctions between
3215
+ different address lines, for example to say
3216
+ that some are part of a United States
3217
+ address. -->
3218
+ <!ATTLIST addr-line
3219
+ %addr-line-atts; >
3220
+
3221
+
3222
+ <!-- COUNTRY: IN AN ADDRESS -->
3223
+ <!ELEMENT country (#PCDATA) >
3224
+ <!-- content-type
3225
+ "content-type" attributes provide a way to
3226
+ preserve or add semantic distinctions between
3227
+ different countries
3228
+ country This attribute allows an archive to regularize
3229
+ the input for searching without altering the
3230
+ content, for example placing a country code
3231
+ in the attribute for a full text or non-
3232
+ standard country abbreviation.
3233
+ Best Practice Note: Although this attribute
3234
+ is optional and open to any value, for best
3235
+ practice, the country should be provided
3236
+ whenever it is known and the ISO 31660-1
3237
+ 2-letter alphabetic codes should be used,
3238
+ for example:
3239
+ US United States
3240
+ GB United Kingdom
3241
+ CA Canada
3242
+ This complete list is available from ISO,
3243
+ in HTML, text-file, and XML-file versions at
3244
+ the following location:
3245
+ http://www.iso.org/iso/en/prods-services/iso3166ma/02iso-3166-code-lists/index.html
3246
+ -->
3247
+ <!ATTLIST country
3248
+ %country-atts; >
3249
+
3250
+
3251
+ <!-- EMAIL ADDRESS ELEMENTS -->
3252
+ <!-- Elements to be mixed with #PCDATA inside the
3253
+ <email> element -->
3254
+ <!ENTITY % email-elements
3255
+ " " >
3256
+
3257
+
3258
+ <!-- EMAIL ADDRESS -->
3259
+ <!ELEMENT email (#PCDATA %email-elements;)* >
3260
+ <!-- content-type
3261
+ "content-type" attributes provide a way to
3262
+ preserve or add semantic distinctions between
3263
+ different email addresses.
3264
+ xlink:href Provides an address or identifier of the
3265
+ object to which the link points, for
3266
+ example a URI or a filename -->
3267
+ <!ATTLIST email
3268
+ %email-atts; >
3269
+
3270
+
3271
+ <!-- FAX NUMBER ELEMENTS -->
3272
+ <!-- The elements that can be included along with
3273
+ data characters inside the content model of
3274
+ a <fax> -->
3275
+ <!ENTITY % fax-elements
3276
+ "%just-rendition; " >
3277
+
3278
+
3279
+ <!-- FAX NUMBER: IN AN ADDRESS -->
3280
+ <!ELEMENT fax (#PCDATA %fax-elements;)* >
3281
+ <!-- content-type
3282
+ "content-type" attributes provide a way to
3283
+ preserve or add semantic distinctions between
3284
+ different email addresses -->
3285
+ <!ATTLIST fax
3286
+ %fax-atts; >
3287
+
3288
+
3289
+ <!-- INSTITUTION NAME ELEMENTS -->
3290
+ <!-- Elements for use in the <institution>
3291
+ element -->
3292
+ <!ENTITY % institution-elements
3293
+ "| %break.class; | %emphasis.class; |
3294
+ %subsup.class;" >
3295
+
3296
+
3297
+ <!-- INSTITUTION NAME: IN AN ADDRESS -->
3298
+ <!-- Name of a institution or organization such as
3299
+ a university or corporation used in an
3300
+ address or within a citation -->
3301
+ <!ELEMENT institution (#PCDATA %institution-elements;)* >
3302
+ <!-- id Unique identifier so the element may be
3303
+ referenced
3304
+ content-type
3305
+ "content-type" attributes provide a way to
3306
+ preserve or add semantic distinctions.
3307
+ xlink:href Provides an address or identifier of the
3308
+ object to which the link points, for
3309
+ example a URI or a filename -->
3310
+ <!ATTLIST institution
3311
+ %institution-atts; >
3312
+
3313
+
3314
+ <!-- PHONE NUMBER ELEMENTS -->
3315
+ <!-- The elements that can be included along with
3316
+ data characters inside the content model of
3317
+ a <phone number>
3318
+ Design Note: All inline mixes begin with an
3319
+ OR bar, but since %just-rendition; is an
3320
+ inline mix, the OR bar is already there. -->
3321
+ <!ENTITY % phone-elements
3322
+ "%just-rendition;" >
3323
+
3324
+
3325
+ <!-- PHONE NUMBER: IN AN ADDRESS -->
3326
+ <!-- A callable phone number in some telephone or
3327
+ wireless system somewhere in the world.
3328
+ Typically includes area code; may include
3329
+ country extension, especially for non-US. -->
3330
+ <!ELEMENT phone (#PCDATA %phone-elements;)* >
3331
+ <!-- content-type
3332
+ "content-type" attributes provide a way to
3333
+ preserve or add semantic distinctions. -->
3334
+ <!ATTLIST phone
3335
+ %phone-atts; >
3336
+
3337
+
3338
+ <!-- URI ELEMENTS -->
3339
+ <!-- The elements that can be included along with
3340
+ data characters inside the content model of
3341
+ a <uri>
3342
+ Design Note: This PE begins with an OR
3343
+ bar because %just-rendition; begins with an
3344
+ OR bar. -->
3345
+ <!ENTITY % uri-elements
3346
+ "%just-rendition;" >
3347
+
3348
+
3349
+ <!-- URI -->
3350
+ <!-- URI such as a URL that may be used as a
3351
+ live link, typically naming a website, such
3352
+ as:
3353
+ <url>http://www.mulberrytech.com</url>
3354
+ Alternatively the element content may name
3355
+ the URL, e.g., "Mulberry's Website" and the
3356
+ "xlink:href" attribute may hold the real
3357
+ URL.
3358
+ <url xlink:href="http://www.mulberrytech.
3359
+ com">Mulberry's Website</url>
3360
+ Related Elements: A URI used outside the
3361
+ context of an address of contributor should
3362
+ be tagged as an External Link <ext-link> -->
3363
+ <!ELEMENT uri (#PCDATA %uri-elements;)* >
3364
+ <!-- content-type
3365
+ "content-type" attribute provides a way to
3366
+ preserve or add semantic distinctions. -->
3367
+ <!ATTLIST uri
3368
+ %uri-atts; >
3369
+
3370
+
3371
+ <!-- ============================================================= -->
3372
+ <!-- DATE ELEMENTS (PUBLICATION HISTORY) -->
3373
+ <!-- ============================================================= -->
3374
+
3375
+
3376
+ <!-- DATE -->
3377
+ <!-- The elements <day>, <month>, and <year> should
3378
+ ALWAYS be numeric values. The date may be
3379
+ represented as a string in <string-date>, but
3380
+ the numeric values should be present whenever
3381
+ possible. -->
3382
+ <!ELEMENT date %date-model; >
3383
+ <!-- date-type Attribute should only be used if the date
3384
+ is one of the known types, otherwise omit
3385
+ the attribute. Values are:
3386
+ accepted - Date manuscript was
3387
+ accepted
3388
+ received - Date manuscript received
3389
+ rev-request - Date revisions were
3390
+ requested or manuscript
3391
+ was returned
3392
+ rev-recd - Date revised manuscript
3393
+ was received -->
3394
+ <!ATTLIST date
3395
+ %date-atts; >
3396
+
3397
+
3398
+ <!-- DAY -->
3399
+ <!-- The numeric value of a day of the month, used
3400
+ in both article metadata and inside a citation,
3401
+ in two digits as it would be stated in the "DD"
3402
+ in an international date format YYYY-MM-DD, for
3403
+ example "03", "25". -->
3404
+ <!ELEMENT day (#PCDATA) >
3405
+ <!-- content-type
3406
+ "content-type" attribute provides a way to
3407
+ preserve or add semantic distinctions. -->
3408
+ <!ATTLIST day
3409
+ %day-atts; >
3410
+
3411
+
3412
+ <!-- MONTH -->
3413
+ <!-- Names one of the months of the year. Used in
3414
+ both article metadata and inside a citation,
3415
+ this element may contain a full month
3416
+ "December", an abbreviation "Dec", or,
3417
+ preferably, a numeric month such as "12".
3418
+ Authoring and Conversion Note: For ease in
3419
+ comparisons and searching, many archives
3420
+ prefer that months be converted to numeric
3421
+ Suggested values:
3422
+ 1 = January
3423
+ 2 = February
3424
+ 3 = March, etc. -->
3425
+ <!ELEMENT month (#PCDATA) >
3426
+ <!-- content-type
3427
+ "content-type" attribute provides a way to
3428
+ preserve or add semantic distinctions. -->
3429
+ <!ATTLIST month
3430
+ %day-atts; >
3431
+
3432
+
3433
+ <!-- SEASON -->
3434
+ <!-- Season of publication, such as "Spring".
3435
+ Used in both article metadata and inside a
3436
+ citation -->
3437
+ <!ELEMENT season (#PCDATA) >
3438
+ <!-- content-type
3439
+ "content-type" attribute provides a way to
3440
+ preserve or add semantic distinctions. -->
3441
+ <!ATTLIST season
3442
+ %day-atts; >
3443
+
3444
+
3445
+ <!-- YEAR -->
3446
+ <!-- Year of publication, which should be expressed
3447
+ as a 4-digit number: "1776" or "1924" -->
3448
+ <!ELEMENT year (#PCDATA) >
3449
+ <!-- content-type
3450
+ "content-type" attribute provides a way to
3451
+ preserve or add semantic distinctions. -->
3452
+ <!ATTLIST year
3453
+ %year-atts; >
3454
+
3455
+
3456
+ <!-- STRING DATE ELEMENTS -->
3457
+ <!-- The elements that can be included along with
3458
+ data characters inside the content model of
3459
+ the <string-date> element -->
3460
+ <!ENTITY % string-date-elements
3461
+ " | %date-parts.class;" >
3462
+
3463
+
3464
+ <!-- DATE AS A STRING -->
3465
+ <!-- This is a representation of the date as a
3466
+ string. Usually used for dates for which
3467
+ months and years are not given, but may be
3468
+ used for any date as a string (i.e., "January,
3469
+ 2001" "Fall 2001" "March 11, 2001".
3470
+ It is better practice to tag the year
3471
+ and month as numbers with a date such
3472
+ as "January, 2001" or "March 11, 2001". -->
3473
+ <!ELEMENT string-date (#PCDATA %string-date-elements;)* >
3474
+ <!-- content-type
3475
+ "content-type" attribute provides a way to
3476
+ preserve or add semantic distinctions. -->
3477
+ <!ATTLIST string-date
3478
+ %string-date-atts; >
3479
+
3480
+
3481
+ <!-- ============================================================= -->
3482
+ <!-- PERSON'S NAME ELEMENTS (BIBLIOGRAPHIC) -->
3483
+ <!-- ============================================================= -->
3484
+
3485
+
3486
+ <!-- STRING NAME ELEMENTS -->
3487
+ <!-- The elements that can be included along with
3488
+ data characters inside the content model of
3489
+ the <string-name> element -->
3490
+ <!ENTITY % string-name-elements
3491
+ " | %person-name.class;" >
3492
+
3493
+
3494
+ <!-- NAME OF PERSON (UNSTRUCTURED) -->
3495
+ <!-- Wrapper element for personal names where the
3496
+ stricter format of the <name> element cannot
3497
+ be followed. This is a very loose element,
3498
+ allowing data characters, generated text,
3499
+ and any or all of the naming elements.
3500
+ Authoring or Conversion Note: Use this
3501
+ element if the name parts are unknown or
3502
+ untagged. -->
3503
+ <!ELEMENT string-name (#PCDATA %string-name-elements;)* >
3504
+
3505
+
3506
+ <!-- NAME OF PERSON (STRUCTURED) -->
3507
+ <!-- Wrapper element for personal names.
3508
+ Authoring or Conversion Note: If the name
3509
+ parts are unknown or untagged, names should
3510
+ be placed within the <string-name> element.
3511
+ -->
3512
+ <!ELEMENT name (surname, given-names?, prefix?, suffix?) >
3513
+ <!-- name-style Used for choosing an inversion algorithm or
3514
+ for sorting or other processing functions. The
3515
+ three values and approximate meanings are:
3516
+ Value Display Sort/Inversion
3517
+ western given family family given
3518
+ eastern family given family given
3519
+ islensk given patronymic given, patronymic
3520
+ content-type
3521
+ "content-type" attribute provides a way to
3522
+ preserve or add semantic distinctions. -->
3523
+ <!ATTLIST name
3524
+ %name-atts; >
3525
+
3526
+
3527
+ <!-- SURNAME ELEMENTS -->
3528
+ <!-- The elements that can be included along with
3529
+ data characters inside the content model of
3530
+ a <surname>
3531
+ Design Note: This PE begins with an OR
3532
+ bar because %just-rendition; begins with an
3533
+ OR bar. -->
3534
+ <!ENTITY % surname-elements
3535
+ "%just-rendition; " >
3536
+
3537
+
3538
+ <!-- SURNAME -->
3539
+ <!-- The surname of an individual. If there is
3540
+ only one name, for example, "Cher" or
3541
+ "Pele", that is considered to be a surname
3542
+ for consistency purposes. -->
3543
+ <!ELEMENT surname (#PCDATA %surname-elements;)* >
3544
+ <!ATTLIST surname
3545
+ %surname-atts; >
3546
+
3547
+
3548
+ <!-- GIVEN (FIRST) NAMES ELEMENTS -->
3549
+ <!-- The elements that can be included along with
3550
+ data characters inside the content model of
3551
+ a <given-names> -->
3552
+ <!ENTITY % given-names-elements
3553
+ "%just-rendition;" >
3554
+
3555
+
3556
+ <!-- GIVEN (FIRST) NAMES -->
3557
+ <!-- Includes all given names for a person, such
3558
+ as the first name, middle names, maiden
3559
+ name if used as part of the married name,
3560
+ etc.) -->
3561
+ <!ELEMENT given-names (#PCDATA %given-names-elements;)* >
3562
+ <!ATTLIST given-names
3563
+ %given-names-atts; >
3564
+
3565
+
3566
+ <!-- PREFIX ELEMENTS -->
3567
+ <!-- The elements that can be included along with
3568
+ data characters inside the content model of
3569
+ a <prefix>
3570
+ Design Note: This PE begins with an OR
3571
+ bar because %just-rendition; begins with an
3572
+ OR bar. -->
3573
+ <!ENTITY % prefix-elements
3574
+ "%just-rendition;" >
3575
+
3576
+
3577
+ <!-- PREFIX -->
3578
+ <!-- Honorifics or other qualifiers that usually
3579
+ precede the surname, for example, Professor,
3580
+ Rev., President, Senator, Dr., Sir, The
3581
+ Honorable, et al. -->
3582
+ <!ELEMENT prefix (#PCDATA %prefix-elements;)* >
3583
+
3584
+
3585
+
3586
+ <!-- SUFFIX ELEMENTS -->
3587
+ <!-- The elements that can be included along with
3588
+ data characters inside the content model of
3589
+ a <suffix>
3590
+ Design Note: This PE begins with an OR bar,
3591
+ it is inside %just-rendition; -->
3592
+ <!ENTITY % suffix-elements
3593
+ "%just-rendition;" >
3594
+
3595
+
3596
+ <!-- SUFFIX -->
3597
+ <!-- Text used as a suffix to a person's name, for
3598
+ example: Sr. Jr. III, 3rd -->
3599
+ <!ELEMENT suffix (#PCDATA %suffix-elements;)* >
3600
+ <!-- content-type
3601
+ "content-type" attribute provides a way to
3602
+ preserve or add semantic distinctions. -->
3603
+ <!ATTLIST suffix
3604
+ %suffix-atts; >
3605
+
3606
+
3607
+ <!-- ============================================================= -->
3608
+ <!-- EXTERNAL LINK ELEMENTS -->
3609
+ <!-- ============================================================= -->
3610
+
3611
+
3612
+ <!-- EXTERNAL LINK ELEMENTS -->
3613
+ <!-- The elements that can be included along with
3614
+ data characters inside the content model of
3615
+ an <ext-link>
3616
+ Design Note: All inline mixes begin with an
3617
+ OR bar, but since %link-elements; is an inline
3618
+ mix, the OR bar is already there. -->
3619
+ <!ENTITY % ext-link-elements
3620
+ "%link-elements;" >
3621
+
3622
+
3623
+ <!-- EXTERNAL LINK -->
3624
+ <!-- Link to an external file, such as Medline,
3625
+ Genbank, etc. Linking may be accomplished
3626
+ using the XLink linking attributes. -->
3627
+ <!ELEMENT ext-link (#PCDATA %ext-link-elements;)* >
3628
+ <!-- ext-link-type
3629
+ Type of external link. Use this attribute
3630
+ if the type of external link is one of the
3631
+ ones below or another named type.
3632
+ Suggested values include:
3633
+ aoi Astronomical Object Identifier
3634
+ doi Digital Object Identifier
3635
+ ec Enzyme nomenclature - see
3636
+ http://www.chem.qmw.ac.uk/iubmb/enzyme/
3637
+ email An email message
3638
+ ftp File transfer protocol
3639
+ gen GenBank identifier
3640
+ genpept Translated Protein-encoding
3641
+ sequence Database
3642
+ highwire HighWire press intrajournal
3643
+ pdb Protein data bank. See
3644
+ http://www.rcsb.org/pdb/
3645
+ pgr Plant gene register. See
3646
+ http://www.tarweed.com/pgr/
3647
+ pir Protein Information Resource
3648
+ see http://pir.georgetown.edu
3649
+ pirdb Protein Information Resource
3650
+ see http://pir.georgetown.edu
3651
+ pmc Used to link between articles
3652
+ in PubMed Central access is
3653
+ PMID
3654
+ sprot Swiss-Prot. See
3655
+ http://www.ebi.ac.uk/swissprot/
3656
+ uri Website or web service
3657
+ id Unique identifier so the element may be
3658
+ referenced
3659
+ xlink:href Provides an address or identifier of the
3660
+ object to which the link points, for
3661
+ example a URI or a filename -->
3662
+ <!ATTLIST ext-link
3663
+ %ext-link-atts; >
3664
+
3665
+
3666
+ <!-- ============================================================= -->
3667
+ <!-- STRUCTURAL ELEMENTS -->
3668
+ <!-- ============================================================= -->
3669
+
3670
+
3671
+ <!-- ATTRIBUTION ELEMENTS -->
3672
+ <!-- The elements that can be included along with
3673
+ data characters inside the content model of
3674
+ an attribution
3675
+ Design Note: All inline mixes begin with an
3676
+ OR bar, but since %simple-phrase; is an
3677
+ inline mix, the OR bar is already there. -->
3678
+ <!ENTITY % attrib-elements
3679
+ "%emphasized-text;" >
3680
+
3681
+
3682
+ <!-- ATTRIBUTION -->
3683
+ <!-- Source, author, formal thanks, or other
3684
+ information (other than copyright material)
3685
+ concerning the origins of an extract, a poem
3686
+ <verse-group> or similar element.
3687
+ Formatting Note: Typically displayed on
3688
+ a separate line (or lines) following the
3689
+ material it concerns, inheriting that
3690
+ material's margins. -->
3691
+ <!ELEMENT attrib (#PCDATA %attrib-elements;)* >
3692
+ <!-- id Unique identifier so the element may be
3693
+ referenced -->
3694
+ <!ATTLIST attrib
3695
+ %attrib-atts; >
3696
+
3697
+ <!-- PRICE -->
3698
+ <!-- Sale price of a work, typically a book or
3699
+ software package that is being reviewed -->
3700
+ <!ELEMENT price (#PCDATA | %emphasis.class;)* >
3701
+ <!-- currency In what currency is this price presented?
3702
+ Best Practice Note: This is an attribute that
3703
+ can take any value, but best practice is to
3704
+ use the ISO 4117 "currency code" values.
3705
+ These are 3-letter, all upper case codes that
3706
+ are NOT the same as the ISO country codes.
3707
+ Examples include:
3708
+ USD United States Dollar in the US and
3709
+ US territories
3710
+ CAD Canadian Dollar
3711
+ EUR European Union Euro
3712
+ RUB Russian Ruble
3713
+ These codes are defined by ISO in ISO 4217
3714
+ and listed at:
3715
+ http://www.iso.org/iso/en/prods-services/popstds/currencycodeslist.html#SZ.
3716
+ Best Practice Note: Although this is an
3717
+ optional attribute, best practice would be
3718
+ to include it for every price where it is
3719
+ known.
3720
+ content-type
3721
+ "content-type" attributes provide a way to
3722
+ preserve or add semantic distinctions. -->
3723
+ <!ATTLIST price
3724
+ %price-atts; >
3725
+
3726
+
3727
+ <!-- STRUCTURAL TITLE ELEMENTS -->
3728
+ <!-- The elements that can be included along with
3729
+ data characters inside the content model of
3730
+ the <title> element
3731
+ Design Note: All inline mixes begin with an
3732
+ OR bar, but since %simple-phrase; is an
3733
+ inline mix, the OR bar is already there. -->
3734
+ <!ENTITY % struct-title-elements
3735
+ "%simple-phrase; | %break.class;" >
3736
+
3737
+
3738
+ <!-- TITLE -->
3739
+ <!-- Heading or title for a structural element
3740
+ such as a Section, Figure, Boxed Text, etc.-->
3741
+ <!ELEMENT title (#PCDATA %struct-title-elements;)* >
3742
+ <!-- id Unique identifier so the element may be
3743
+ referenced
3744
+ content-type
3745
+ "content-type" attributes provide a way to
3746
+ preserve or add semantic distinctions. -->
3747
+ <!ATTLIST title
3748
+ %title-atts; >
3749
+
3750
+
3751
+ <!-- LABEL ELEMENTS -->
3752
+ <!-- The elements that can be included along with
3753
+ data characters inside the content model of
3754
+ the <label> element -->
3755
+ <!ENTITY % label-elements
3756
+ "| %emphasis.class; | %inline-display.class; |
3757
+ %inline-math.class; | %subsup.class;" >
3758
+
3759
+
3760
+ <!-- LABEL OF A FIGURE, REFERENCE, ETC. -->
3761
+ <!-- The number and any prefix word that comes
3762
+ before, for example, the caption of a Figure,
3763
+ such as "Figure 3." or "Exhibit 2.". This
3764
+ element can be used to preserve the prefix
3765
+ number or label of an element, for example
3766
+ for a reference or citation "25." or
3767
+ "[Lapeyre 2002]". This can be useful when
3768
+ reconstructing untagged cross references. -->
3769
+ <!ELEMENT label (#PCDATA %label-elements;)* >
3770
+
3771
+
3772
+ <!-- ============================================================= -->
3773
+ <!-- RELATED ARTICLE ELEMENTS -->
3774
+ <!-- ============================================================= -->
3775
+
3776
+
3777
+ <!-- RELATED ARTICLE ELEMENTS -->
3778
+ <!-- Elements allowed inside <related-article> -->
3779
+ <!ENTITY % related-article-elements
3780
+ "| %emphasis.class; | %journal-id.class; |
3781
+ %references.class; | %subsup.class;" >
3782
+
3783
+
3784
+ <!-- RELATED ARTICLE INFORMATION -->
3785
+ <!-- Wrapper element, used as a container for
3786
+ text links to a related article, possibly
3787
+ accompanied by a very brief description
3788
+ such as "errata (correction)".
3789
+ Remarks: This element is slightly overloaded
3790
+ in that it has 2 uses, one inside the article
3791
+ metadata to name one or more related articles
3792
+ and as part of the link class, which can
3793
+ occur many places in textual content.
3794
+ This allows all such references, to
3795
+ companion articles within the same journal,
3796
+ to a previous part of a multi-part article,
3797
+ to a news item that summarizes the article,
3798
+ to the article for which this article is
3799
+ a correction or addendum, etc. wherever
3800
+ these occur in the article. -->
3801
+ <!ELEMENT related-article
3802
+ (#PCDATA %related-article-elements;)* >
3803
+ <!-- id Unique identifier so the element may be
3804
+ referenced
3805
+ alt-form-of
3806
+ Exactly like the "alt-form-of" attribute
3807
+ used with <graphic>, this is an IDREF
3808
+ attribute which points to the ID of another
3809
+ <related-article> in the same document
3810
+ rather than to an external file.
3811
+ related-article-type
3812
+ This attribute can take any text value,
3813
+ suggested values include:
3814
+ addendum Additional material for an
3815
+ article, generated too late
3816
+ to be added to the main text
3817
+ commentary-article
3818
+ Used in an commentary or
3819
+ editorial to link to the
3820
+ article on which it is
3821
+ commenting
3822
+ companion Used in an article to link
3823
+ to a companion (related
3824
+ or sibling article)
3825
+ corrected-article
3826
+ Used in a correction to link
3827
+ to the article being
3828
+ corrected. Sometimes called
3829
+ erratum.
3830
+ in-this-issue Related article in the same
3831
+ journal issue
3832
+ letter A letter to the publication
3833
+ or a reply to such a
3834
+ letter
3835
+ commentary Used in an article to link
3836
+ to its associated commentary
3837
+ or editorial
3838
+ correction-forward
3839
+ Used in an article to link
3840
+ forward to its associated
3841
+ correction (rarely used)
3842
+ partial-retraction Partial retraction of
3843
+ previously published material
3844
+ retracted-article
3845
+ Used in a retraction to link
3846
+ to the article being retracted
3847
+ retraction-forward
3848
+ Used in an article to link
3849
+ forward to its associated
3850
+ retraction (rare)
3851
+ vol Volume of the journal in which the related
3852
+ article exists. The scope is limited to
3853
+ the journal; in which the current article
3854
+ resides.
3855
+ page Page number of the related article. Scope
3856
+ is limited to the volume of the journal in
3857
+ which the current article resides. The
3858
+ values should be a first page or a page
3859
+ range.
3860
+ xlink:href Provides an address or identifier of the
3861
+ object to which the link points, for
3862
+ example a URI or a filename. -->
3863
+ <!ATTLIST related-article
3864
+ %related-article-atts; >
3865
+
3866
+
3867
+ <!-- ============================================================= -->
3868
+ <!-- FRONT MATTER/BACK MATTER ELEMENTS -->
3869
+ <!-- ============================================================= -->
3870
+
3871
+
3872
+ <!-- ACKNOWLEDGMENTS MODEL -->
3873
+ <!-- Content model for the <ack> element -->
3874
+ <!ENTITY % ack-model "%sec-opt-title-model;" >
3875
+
3876
+
3877
+ <!-- ACKNOWLEDGMENTS -->
3878
+ <!ELEMENT ack %ack-model; >
3879
+ <!-- id Unique identifier so the element may be
3880
+ referenced
3881
+ content-type
3882
+ Identification of the subject, type of
3883
+ content, or reason that this word or phrase
3884
+ is considered semantically special, as a
3885
+ means of preserving the semantic intent of
3886
+ the original tagging. -->
3887
+ <!ATTLIST ack
3888
+ %ack-atts; >
3889
+
3890
+
3891
+ <!-- BIOGRAPHY MODEL -->
3892
+ <!-- Content model for the <bio> element -->
3893
+ <!ENTITY % bio-model "(title?, (%just-para.class;)+ ) " >
3894
+
3895
+
3896
+ <!-- BIOGRAPHY -->
3897
+ <!-- Short biography of a person, usually the
3898
+ author
3899
+ Authoring Note: The "xlink:href" attribute
3900
+ may be used to point to a graphic of the
3901
+ author or to his/her website, etc. -->
3902
+ <!ELEMENT bio %bio-model; >
3903
+ <!-- id Unique identifier so the element may be
3904
+ referenced
3905
+ rid Points to the identifier of an author or
3906
+ authors
3907
+ content-type
3908
+ "content-type" attribute is a means of
3909
+ preserving or adding additional typing or
3910
+ semantic information to the biography.
3911
+ xlink:href Provides an address or identifier of the
3912
+ object to which the link points, for
3913
+ example a URI or a filename. -->
3914
+ <!ATTLIST bio
3915
+ %bio-atts; >
3916
+
3917
+
3918
+ <!-- NOTES MODEL -->
3919
+ <!-- Content model for the <notes> element -->
3920
+ <!ENTITY % notes-model "%sec-opt-title-model;" >
3921
+
3922
+
3923
+ <!-- NOTES -->
3924
+ <!-- A container element for the notes that may
3925
+ appear at the end of an Article or at the
3926
+ end of a Table. For example, a typical
3927
+ end-of-article note is a "Note in Proof".
3928
+ A Note in Proof contains late-breaking news
3929
+ items or other material produced while the
3930
+ article was being typeset or was otherwise
3931
+ in production, that therefore happened too
3932
+ late to be included in the text of the
3933
+ article. This is typically NOT peer-reviewed
3934
+ content and citations to other material is
3935
+ usually just integrated into the text, not
3936
+ listed separately in a References List. -->
3937
+ <!ELEMENT notes %notes-model; >
3938
+ <!-- id Unique identifier so the element may be
3939
+ referenced
3940
+ notes-type To identify the type of note, if the type can
3941
+ be/has been identified, for example,
3942
+ "note-in-proof" -->
3943
+ <!ATTLIST notes
3944
+ %notes-atts; >
3945
+
3946
+
3947
+ <!-- ============================================================= -->
3948
+ <!-- ACCESSIBILITY ELEMENTS -->
3949
+ <!-- ============================================================= -->
3950
+
3951
+
3952
+ <!-- ALTERNATE TITLE TEXT FOR A FIGURE, ETC. -->
3953
+ <!-- Short phrase used to display or pronounce
3954
+ as an alternative to providing the full
3955
+ graphic for accessibility display or
3956
+ graphic-limited websites or devices. For
3957
+ example, <alt-text> may be used to display
3958
+ "behind" a figure or graphic.
3959
+ Authoring and Conversion Note: Not to be used
3960
+ as a replacement for <caption>. -->
3961
+ <!ELEMENT alt-text (#PCDATA) >
3962
+ <!-- id Unique identifier so the element may be
3963
+ referenced
3964
+ content-type
3965
+ "content-type" attribute provides a way to
3966
+ preserve or add semantic distinctions.
3967
+ xml:lang The language in which the value of the
3968
+ element is expressed. Recommended best
3969
+ practice is to use values as defined in
3970
+ RFC 1766, typically 2-letter language
3971
+ codes such as "FR" (French), "EN" (English),
3972
+ and "DE" (German). These values are NOT
3973
+ case sensitive, so "EN" = "en". The values
3974
+ may include hyphenated differentiations such
3975
+ as "EN-AU" (Australian English) and "EN-US"
3976
+ (United States English). -->
3977
+ <!ATTLIST alt-text
3978
+ %alt-text-atts; >
3979
+
3980
+
3981
+ <!-- LONG DESCRIPTION ELEMENTS -->
3982
+ <!-- Elements to be mixed with data characters
3983
+ inside the <long-desc> element -->
3984
+ <!ENTITY % long-desc-elements
3985
+ " " >
3986
+
3987
+
3988
+ <!-- LONG DESCRIPTION -->
3989
+ <!-- Description or summary of the content of a
3990
+ graphical object, table, or textual object
3991
+ such as a text box, used by some systems to
3992
+ make the object accessible, even to people
3993
+ or systems that cannot read/see/display the
3994
+ object.
3995
+ Authoring and Conversion Note: Not to be used
3996
+ as a replacement for <caption>. -->
3997
+ <!ELEMENT long-desc (#PCDATA %long-desc-elements;)* >
3998
+ <!-- id Unique identifier so the element may be
3999
+ referenced
4000
+ content-type
4001
+ "content-type" attribute provides a way to
4002
+ preserve or add semantic distinctions, for
4003
+ multiple conference dates
4004
+ xml:lang The language in which the value of the
4005
+ element is expressed. Recommended best
4006
+ practice is to use values as defined in
4007
+ RFC 1766, typically 2-letter language
4008
+ codes such as "FR" (French), "EN" (English),
4009
+ and "DE" (German). These values are NOT
4010
+ case sensitive, so "EN" = "en". The values
4011
+ may include hyphenated differentiations such
4012
+ as "EN-AU" (Australian English) and "EN-US"
4013
+ (United States English). -->
4014
+ <!ATTLIST long-desc
4015
+ %long-desc-atts; >
4016
+
4017
+
4018
+ <!-- DEFINITION LIST: DEFINITION MODEL -->
4019
+ <!-- Content model for the <def> element -->
4020
+ <!ENTITY % def-model "((%just-para.class;)+ )" >
4021
+
4022
+
4023
+ <!-- DEFINITION LIST: DEFINITION -->
4024
+ <!-- Used in two senses:
4025
+ 1) The definition, description, or other
4026
+ explanation of the word, phrase, or picture
4027
+ of a 2-part or definition list
4028
+ 2) The definition or expansion of an
4029
+ abbreviation or acronym <abbrev> -->
4030
+ <!ELEMENT def %def-model; >
4031
+ <!-- id Unique identifier so the element may be
4032
+ referenced
4033
+ rid Points to the identifier of a term,
4034
+ so that a term and definition may be linked
4035
+ -->
4036
+ <!ATTLIST def
4037
+ %def-atts; >
4038
+
4039
+
4040
+ <!-- ============================================================= -->
4041
+ <!-- CUSTOMIZED METADATA ELEMENTS -->
4042
+ <!-- ============================================================= -->
4043
+
4044
+
4045
+ <!-- CUSTOMIZED METADATA WRAPPER MODEL -->
4046
+ <!-- Content model for the <custom-meta-wrap>
4047
+ element -->
4048
+ <!ENTITY % custom-meta-wrap-model
4049
+ "(custom-meta+)" >
4050
+
4051
+
4052
+ <!-- CUSTOMIZED METADATA WRAPPER -->
4053
+ <!-- Some DTDs and schemas allow for metadata
4054
+ above and beyond that which can be specified
4055
+ by this DTD. This element is a wrapper
4056
+ element used to contain all these additional
4057
+ metadata elements. -->
4058
+ <!ELEMENT custom-meta-wrap
4059
+ %custom-meta-wrap-model; >
4060
+
4061
+
4062
+ <!-- CUSTOMIZED METADATA MODEL -->
4063
+ <!-- Content model for the <custom-meta> element-->
4064
+ <!ENTITY % custom-meta-model
4065
+ "(meta-name, meta-value)" >
4066
+
4067
+
4068
+ <!-- CUSTOM METADATA -->
4069
+ <!-- Some DTDs and schemas allow for metadata
4070
+ above and beyond that which can be specified
4071
+ by this DTD. This element is used to capture
4072
+ metadata elements that have not been defined
4073
+ explicitly in the models for this DTD, so
4074
+ that the intellectual content will not be lost.
4075
+ Remarks: The <custom-meta> element allows
4076
+ for an infinite number of name/value pairs,
4077
+ with few constraints on the length or
4078
+ content of the value. This element will
4079
+ probably be used for special cases, product-
4080
+ specific material, or other unusual
4081
+ metadata, for example the journal-history
4082
+ information preserved in at least one
4083
+ publisher's DTD. -->
4084
+ <!ELEMENT custom-meta %custom-meta-model; >
4085
+ <!-- id Unique identifier so the element may be
4086
+ referenced -->
4087
+ <!ATTLIST custom-meta
4088
+ %custom-meta-atts; >
4089
+
4090
+
4091
+ <!-- METADATA DATA NAME ELEMENTS -->
4092
+ <!-- Elements that may be used, along with data
4093
+ characters, inside the <meta-name> element
4094
+ Design Note: All inline mixes begin with an
4095
+ OR bar, but since %simple-phrase; is an
4096
+ inline mix, the OR bar is already there. -->
4097
+ <!ENTITY % meta-name-elements
4098
+ "%simple-phrase;" >
4099
+
4100
+
4101
+ <!-- METADATA DATA NAME FOR CUSTOM METADATA -->
4102
+ <!-- Some DTDs and schemas allow for metadata
4103
+ above and beyond that which can be specified
4104
+ by this DTD. The <custom-meta> element
4105
+ allow for an infinite number of name/value
4106
+ pairs, with few constraints on the length or
4107
+ content of the value. This element contains
4108
+ the name of the metadata field. -->
4109
+ <!ELEMENT meta-name (#PCDATA %meta-name-elements;)* >
4110
+
4111
+
4112
+ <!-- METADATA DATA VALUE ELEMENTS -->
4113
+ <!-- Elements that may be used, along with data
4114
+ characters, inside the <meta-value> element
4115
+ Design Note: All inline mixes begin with an
4116
+ OR bar, but since %simple-phrase; is an
4117
+ inline mix, the OR bar is already there. -->
4118
+ <!ENTITY % meta-value-elements
4119
+ "%simple-phrase;" >
4120
+
4121
+
4122
+ <!-- METADATA DATA VALUE FOR CUSTOM METADATA -->
4123
+ <!-- Some DTDs and schemas allow for metadata
4124
+ above and beyond that which can be specified
4125
+ by this DTD. The <custom-meta> element
4126
+ allow for an infinite number of name/value
4127
+ pairs, with few constraints on the length or
4128
+ content of the value. This element contains
4129
+ the value of the metadata field that is named
4130
+ by the <meta-name> element. -->
4131
+ <!ELEMENT meta-value (#PCDATA %meta-value-elements;)* >
4132
+
4133
+
4134
+
4135
+ <!-- ============================================================= -->
4136
+ <!-- GENERATED TEXT OR PUNCTUATION -->
4137
+ <!-- ============================================================= -->
4138
+
4139
+
4140
+ <!-- X TEXT ATTRIBUTES -->
4141
+ <!-- Attributes for the element <x> -->
4142
+ <!ENTITY % x-atts
4143
+ "content-type
4144
+ CDATA #IMPLIED
4145
+ xml:space (default | preserve) #FIXED 'preserve'" >
4146
+
4147
+
4148
+ <!-- X ELEMENTS -->
4149
+ <!-- Elements for use inside the <x> element -->
4150
+ <!ENTITY % x-elements " " >
4151
+
4152
+
4153
+ <!-- X - GENERATED TEXT AND PUNCTUATION -->
4154
+ <!-- A container element to hold punctuation or
4155
+ other generated text, typically when 1) an
4156
+ archive decides not to have any text
4157
+ generated and thus to pre-generate such
4158
+ things as commas or semicolons between
4159
+ keywords or 2) when an archive receives text
4160
+ with <x> tags embedded and wishes to retain
4161
+ them.
4162
+ Remarks: This element is called "x" for
4163
+ historical reasons, since DTDs that use an
4164
+ element for generated punctuation have
4165
+ typically called it that. -->
4166
+ <!ELEMENT x (#PCDATA %x-elements;)* >
4167
+ <!-- content-type
4168
+ "content-type" attribute provides a way to
4169
+ preserve or add semantic distinctions, for
4170
+ multiple copyright statements
4171
+ xml:space Request that, when printing or displaying
4172
+ this element, all white space such as tabs
4173
+ and spaces and line breaks be preserved. -->
4174
+ <!ATTLIST x
4175
+ %x-atts; >
4176
+
4177
+
4178
+ <!-- ================== End Common (Shared) Elements Module ====== -->
4179
+