gphys 1.2.2.1 → 1.4.3
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- checksums.yaml +7 -0
- data/.gitignore +8 -17
- data/.rspec +2 -0
- data/.travis.yml +3 -0
- data/ChangeLog +5762 -753
- data/LICENSE.txt +30 -18
- data/Rakefile +1 -0
- data/bin/console +14 -0
- data/bin/gpcat +43 -2
- data/bin/gpcut +16 -0
- data/bin/gpvect +167 -15
- data/bin/gpview +254 -51
- data/bin/setup +7 -0
- data/dim_op.c +1220 -0
- data/doc/attribute.html +19 -0
- data/doc/attributenetcdf.html +15 -0
- data/doc/axis.html +387 -0
- data/doc/coordmapping.html +111 -0
- data/doc/coordtransform.html +36 -0
- data/doc/dclext.html +821 -0
- data/doc/derivative/gphys-derivative.html +100 -0
- data/doc/derivative/index.html +21 -0
- data/doc/derivative/index.rd +14 -0
- data/doc/derivative/math-doc/document.pdf +0 -0
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- data/doc/derivative/numru-derivative.html +158 -0
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- data/ext_init.c +1 -0
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- data/lib/numru/dclext.rb +718 -546
- data/lib/numru/derivative.rb +2 -0
- data/lib/numru/ganalysis.rb +38 -0
- data/lib/numru/ganalysis/beta_plane.rb +103 -0
- data/lib/numru/ganalysis/eof.rb +3 -2
- data/lib/numru/ganalysis/fitting.rb +559 -0
- data/lib/numru/ganalysis/histogram.rb +36 -19
- data/lib/numru/ganalysis/log_p.rb +130 -0
- data/lib/numru/ganalysis/met.rb +396 -2
- data/lib/numru/ganalysis/met_z.rb +300 -0
- data/lib/numru/ganalysis/planet.rb +17 -7
- data/lib/numru/ganalysis/qg.rb +685 -0
- data/lib/numru/ganalysis/sigma_coord.rb +90 -0
- data/lib/numru/gdir.rb +2 -1
- data/lib/numru/ggraph.rb +204 -60
- data/lib/numru/ggraph_on_merdional_section.rb +1 -1
- data/lib/numru/gphys.rb +6 -0
- data/lib/numru/gphys/assoccoords.rb +18 -3
- data/lib/numru/gphys/axis.rb +209 -8
- data/lib/numru/gphys/derivative.rb +11 -0
- data/lib/numru/gphys/gphys.rb +539 -48
- data/lib/numru/gphys/gphys_dim_op.rb +331 -0
- data/lib/numru/gphys/gphys_fft.rb +48 -2
- data/lib/numru/gphys/gphys_io.rb +241 -13
- data/lib/numru/gphys/gphys_netcdf_io.rb +77 -39
- data/lib/numru/gphys/gphys_nusdas_io.rb +3 -0
- data/lib/numru/gphys/grib.rb +133 -54
- data/lib/numru/gphys/grib_params.rb +26 -3
- data/lib/numru/gphys/grid.rb +75 -34
- data/lib/numru/gphys/interpolate.rb +24 -10
- data/lib/numru/gphys/mdstorage.rb +160 -0
- data/lib/numru/gphys/netcdf_convention.rb +4 -2
- data/lib/numru/gphys/subsetmapping.rb +0 -1
- data/lib/numru/gphys/unumeric.rb +50 -5
- data/lib/numru/gphys/varray.rb +15 -30
- data/lib/numru/gphys/varraycomposite.rb +107 -24
- data/lib/numru/gphys/varraynetcdf.rb +9 -3
- data/lib/numru/gphys/version.rb +5 -0
- data/sample/druby_cli1.rb +2 -0
- data/sample/druby_cli2.rb +0 -6
- data/sample/druby_serv2.rb +0 -13
- data/spec/gphys_spec.rb +11 -0
- data/spec/spec_helper.rb +2 -0
- data/test/test_assoccoords.rb +102 -0
- data/test/test_axis.rb +61 -0
- data/test/test_fitting.rb +116 -0
- data/test/test_gphys.rb +20 -0
- data/test/test_met_z.rb +96 -0
- data/test/test_sigma_coord.rb +50 -0
- data/{test → test_old}/eof_slp.rb +0 -0
- data/{test → test_old}/mltbit.dat +0 -0
- data/{test → test_old}/test_ep_flux.rb +0 -0
- data/{test → test_old}/test_multibitIO.rb +0 -0
- metadata +530 -191
- data/README.md +0 -29
- data/lib/gphys.rb +0 -2
- data/lib/numru/dclext_datetime_ax.rb +0 -220
- data/lib/version.rb +0 -3
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<h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
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<p>grads2nc_with_gphys - GrADS to NetCDF converter</p>
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<h1><a name="label-1" id="label-1">WARNING</a></h1><!-- RDLabel: "WARNING" -->
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<p>Not efficient if the GrADS file has many variables.</p>
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<h1><a name="label-2" id="label-2">USAGE</a></h1><!-- RDLabel: "USAGE" -->
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<pre>% grads2nc_with_gphys infilename outfilename [-v varname1 [varname2 ...]]</pre>
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<h1><a name="label-3" id="label-3">EXAMPLE</a></h1><!-- RDLabel: "EXAMPLE" -->
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<pre>% grads2nc_with_gphys ../testdata/T.jan.ctl tmp.nc
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% grads2nc_with_gphys ../testdata/T.jan.ctl tmp.nc -v T</pre>
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<title>../lib/numru/gphys/grads_gridded.rb</title>
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<body>
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<h1><a name="label-0" id="label-0">NumRu::GrADS_Gridded -- a class for GrADS gridded datasets</a></h1><!-- RDLabel: "NumRu::GrADS_Gridded ­­ a class for GrADS gridded datasets" -->
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<p>by T Horinouchi and R Mizuta</p>
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<h2><a name="label-1" id="label-1">Overview</a></h2><!-- RDLabel: "Overview" -->
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<p>a GrADS_Gridded object corresponds to a GrADS control file,
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through which the users can also access its binary data file(s).</p>
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<h2><a name="label-2" id="label-2">Current Limitations</a></h2><!-- RDLabel: "Current Limitations" -->
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<ul>
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<li>option 365_day_calendar is not interpreted</li>
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<li>Partial support of the "template" option
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(only %y2,%y4,%m1,%m2,%d1,%d2,%h1,%h2,%n2)
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(Time is assumed to be increasing monotonically).</li>
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</ul>
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<h2><a name="label-3" id="label-3">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
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<dl>
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<dt><h4><a name="label-4" id="label-4"><code>GrADS_Gridded.new(<var>ctlfilename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.new" -->
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<dd>
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same as GrADS_Gridded.open</dd>
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<dt><h4><a name="label-5" id="label-5"><code>GrADS_Gridded.open(<var>ctlfilename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.open" -->
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<dd>
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<p>make a new GrADS_Gridded object. </p>
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<p>ARGUMENTS</p>
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<ul>
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<li>ctlfilename (String): name of the control file to open</li>
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<li>mode (String): IO mode. "r" (read only) or "w" (write only).</li>
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</ul>
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<p>REMARK</p>
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<ul>
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<li>You can modify the object through instance methods even if mode=="r".
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In that case, the modification will not be written in the original
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control file.</li>
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</ul></dd>
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<dt><h4><a name="label-6" id="label-6"><code>GrADS_Gridded.create(<var>ctlfilename</var>, <var>noclobber</var>=<var>false</var>, <var>share</var>=<var>false</var>)</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.create" -->
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<dd>
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<p>make a new GrADS_Gridded object with creating a new control file</p>
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<p>REMARK</p>
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<ul>
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<li>It is used with writing methods, but currently writing methods
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does not work. </li>
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</ul></dd>
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</dl>
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<h2><a name="label-7" id="label-7">Methods</a></h2><!-- RDLabel: "Methods" -->
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<dl>
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<dt><h4><a name="label-8" id="label-8"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
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<dd>
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returns the number of dimensions in the file (always 4). </dd>
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<dt><h4><a name="label-9" id="label-9"><code>nvars</code></a></h4></dt><!-- RDLabel: "nvars" -->
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<dd>
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returns the number of variables in the file. </dd>
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<dt><h4><a name="label-10" id="label-10"><code>natts</code></a></h4></dt><!-- RDLabel: "natts" -->
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<dd>
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returns the number of attributes of the variable.</dd>
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<dt><h4><a name="label-11" id="label-11"><code>path</code></a></h4></dt><!-- RDLabel: "path" -->
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<dd>
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returns the path of the control file.</dd>
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<dt><h4><a name="label-12" id="label-12"><code>put_att( <var>attname</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
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<dd>
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<p>set global attribute</p>
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<p>ARGUMENTS</p>
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<ul>
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<li>attrname (String): name of an attribute</li>
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<li>value (String): value of an attribute</li>
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</ul></dd>
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<dt><h4><a name="label-13" id="label-13"><code>def_var(<var>name</var>="<var>noname</var>",<var>nlev</var>=<var>0</var>,<var>option</var>="<var>99</var>",<var>description</var>="")</code></a></h4></dt><!-- RDLabel: "def_var" -->
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<dd>
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<p>define a variable</p>
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<p>ARGUMENTS</p>
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<ul>
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<li>name (String): name of the variable</li>
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<li>nlev (Integer): number of vertical levels</li>
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<li>option (String): variable placement option
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("99": normal, "-1,30": transpose lon and lat)</li>
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</ul></dd>
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<dt><h4><a name="label-14" id="label-14"><code>var( <var>varname</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "var" -->
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<dd>
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<p>opens an existing variable in the file. </p>
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<p>ARGUMENTS</p>
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<ul>
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<li>varname (String): name of the variable to open</li>
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</ul>
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<p>RETURN VALUE</p>
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<ul>
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<li>a GrADSVar object. </li>
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</ul></dd>
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<dt><h4><a name="label-15" id="label-15"><code>vars( <var>names</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "vars" -->
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<dd>
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<p>opens existing variables in the file. </p>
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<p>ARGUMENTS</p>
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<ul>
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<li>names (Array): names(String) of the variable to open</li>
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</ul>
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<p>RETURN VALUE</p>
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<ul>
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<li>Array of GrADSVar objects.
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returns all variables if names==nil</li>
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</ul></dd>
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<dt><h4><a name="label-16" id="label-16"><code>get_att( <var>key</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "get_att" -->
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<dd>
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returns tha value of the global attribute</dd>
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<dt><h4><a name="label-17" id="label-17"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
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<dd>
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returns the names of all dimensions in the control file.</dd>
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<dt><h4><a name="label-18" id="label-18"><code>var_names</code></a></h4></dt><!-- RDLabel: "var_names" -->
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<dd>
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returns the names of all variables in the control file.</dd>
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<dt><h4><a name="label-19" id="label-19"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
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<dd>
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returns the names of all the global attributes.</dd>
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<dt><h4><a name="label-20" id="label-20"><code>to_ctl</code></a></h4></dt><!-- RDLabel: "to_ctl" -->
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<dd>
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<p>returns the contents of the corresponding control file as a String.</p>
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<p>REMARK</p>
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<ul>
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<li>The contents is reconstructed from the internal data of the object.
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Therefore, even when the object is based on a read-only control file,
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it is not necessarily the same as the original one. It is especially
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true when the object was modified after it is opened.</li>
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</ul></dd>
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<dt><h4><a name="label-21" id="label-21"><code>get(<var>name</var>, <var>z</var>, <var>t</var>)</code></a></h4></dt><!-- RDLabel: "get" -->
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<dd>
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<p>reads the binary data and returns as a NArray.</p>
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<p>ARGUMENTS</p>
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<ul>
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<li>name (String): name of the variable to read</li>
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<li>z (Integer, currently): vertical level to read (0,1,2,...; starting
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from 0). Currently only one vertical levels must be chosen, but in the
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future, it is planned to support multiple levels.</li>
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<li>t (Integer, currently): time to read (0,1,2,...; starting
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from 0). Currently only one time must be chosen, but in the
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future, it is planned to support multiple times.</li>
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</ul></dd>
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<dt><h4><a name="label-22" id="label-22"><code>put(<var>ary</var>)</code></a></h4></dt><!-- RDLabel: "put" -->
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<dd>
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<p>writes the NArray on the binary data file. </p>
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<p>ARGUMENTS</p>
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<ul>
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<li>ary (NArray): data to write. </li>
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</ul></dd>
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<dt><h4><a name="label-23" id="label-23"><code>varnames</code></a></h4></dt><!-- RDLabel: "varnames" -->
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<dd>
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Returns names of the variable in the GrADS file as an Array in the order
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placed.</dd>
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<dt><h4><a name="label-24" id="label-24"><code>dimensions</code></a></h4></dt><!-- RDLabel: "dimensions" -->
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<dd>
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<p>Returns info on the four dimensions.</p>
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<p>RETURN VALUE</p>
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<ul>
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<li><p>an Array of 4 elements: dimension[0] for x, dimension[1] for y,
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dimension[2] for z, and dimension[3] for t. Each of them is a
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Hash like the following:</p>
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<pre>{:name=>"x",
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:len=>132,
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:flag=>"LINEAR",
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:spec=>"-0.7500 1.5000",
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:start=>-0.75, :increment=>1.5,
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:description=>"longitude",
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:units=>"degrees_east"}</pre>
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<p>Here, :len, :flag, and :spec are directly from the control file, while
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others are derived properties for internal use. </p></li>
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</ul>
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<p>WARNING</p>
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<ul>
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<li>Each elements of the return value is not a clone but is a direct
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association to an internal object of the object. Therefore, to
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modify it is to modify the object. That is, dimensions[0][:len]=10
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would actually change the internal variable, while dimensions[0]=nil
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has no effect (the former is a substitution IN a Hash, while the latter
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is a substitution OF the Hash).</li>
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</ul></dd>
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<dt><h4><a name="label-25" id="label-25"><code>get_dim(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "get_dim" -->
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<dd>
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<p>returns positions of a dimension as an NArray.</p>
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<p>ARGUMENTS</p>
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<ul>
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<li>dim (String): a dimension name</li>
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</ul>
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<p>RETURN VALUE</p>
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<ul>
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<li>an NArray</li>
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</ul></dd>
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<dt><h4><a name="label-26" id="label-26"><code>title</code></a></h4></dt><!-- RDLabel: "title" -->
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<dt><h4><a name="label-27" id="label-27"><code>title=</code></a></h4></dt><!-- RDLabel: "title=" -->
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<dd>
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get/set the title</dd>
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+
<dt><h4><a name="label-28" id="label-28"><code>undef</code></a></h4></dt><!-- RDLabel: "undef" -->
|
|
194
|
+
<dt><h4><a name="label-29" id="label-29"><code>undef=</code></a></h4></dt><!-- RDLabel: "undef=" -->
|
|
195
|
+
<dd>
|
|
196
|
+
get/set the undef value</dd>
|
|
197
|
+
<dt><h4><a name="label-30" id="label-30"><code>dset</code></a></h4></dt><!-- RDLabel: "dset" -->
|
|
198
|
+
<dt><h4><a name="label-31" id="label-31"><code>dset=</code></a></h4></dt><!-- RDLabel: "dset=" -->
|
|
199
|
+
<dd>
|
|
200
|
+
get/set the dset string</dd>
|
|
201
|
+
</dl>
|
|
202
|
+
<h1><a name="label-32" id="label-32">GrADSVar -- a class for a variable of GrADS gridded datasets</a></h1><!-- RDLabel: "GrADSVar ­­ a class for a variable of GrADS gridded datasets" -->
|
|
203
|
+
<p>by R Mizuta</p>
|
|
204
|
+
<h2><a name="label-33" id="label-33">Overview</a></h2><!-- RDLabel: "Overview" -->
|
|
205
|
+
<p>a GrADSVar object corresponds to one variable in a GrADS control file.
|
|
206
|
+
It is intended to behave as a correspondent of a NetCDFVar object. </p>
|
|
207
|
+
<h2><a name="label-34" id="label-34">Current Limitations</a></h2><!-- RDLabel: "Current Limitations" -->
|
|
208
|
+
<ul>
|
|
209
|
+
<li>Only a part of the methods can work. </li>
|
|
210
|
+
<li>Writing methods are not supported. </li>
|
|
211
|
+
</ul>
|
|
212
|
+
<h2><a name="label-35" id="label-35">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
213
|
+
<dl>
|
|
214
|
+
<dt><h4><a name="label-36" id="label-36"><code>GrADSVar.new(<var>file</var>, <var>varname</var>)</code></a></h4></dt><!-- RDLabel: "GrADSVar.new" -->
|
|
215
|
+
<dd>
|
|
216
|
+
<p>make a new GrADSVar object. </p>
|
|
217
|
+
<p>ARGUMENTS</p>
|
|
218
|
+
<ul>
|
|
219
|
+
<li>file (GrADS_Gridded or String): a GrADS_Gridded object or
|
|
220
|
+
a name of the control file to open</li>
|
|
221
|
+
<li>varname (String): name of the variable to open</li>
|
|
222
|
+
</ul></dd>
|
|
223
|
+
</dl>
|
|
224
|
+
<h2><a name="label-37" id="label-37">Methods</a></h2><!-- RDLabel: "Methods" -->
|
|
225
|
+
<dl>
|
|
226
|
+
<dt><h4><a name="label-38" id="label-38"><code>shape_ul0</code></a></h4></dt><!-- RDLabel: "shape_ul0" -->
|
|
227
|
+
<dd>
|
|
228
|
+
<p>returns the shape of the variable, but the length of the unlimited
|
|
229
|
+
dimension is set to zero.</p>
|
|
230
|
+
<p>RETURN VALUE</p>
|
|
231
|
+
<ul>
|
|
232
|
+
<li>Array. [length of 0th dim, length of 1st dim,.. ]</li>
|
|
233
|
+
</ul></dd>
|
|
234
|
+
<dt><h4><a name="label-39" id="label-39"><code>shape_current</code></a></h4></dt><!-- RDLabel: "shape_current" -->
|
|
235
|
+
<dd>
|
|
236
|
+
<p>returns the current shape of the variable.</p>
|
|
237
|
+
<p>RETURN VALUE</p>
|
|
238
|
+
<ul>
|
|
239
|
+
<li>Array. [length of 0th dim, length of 1st dim,.. ]</li>
|
|
240
|
+
</ul></dd>
|
|
241
|
+
<dt><h4><a name="label-40" id="label-40"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
|
|
242
|
+
<dd>
|
|
243
|
+
returns the names of all dimensions of the variable.</dd>
|
|
244
|
+
<dt><h4><a name="label-41" id="label-41"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
|
|
245
|
+
<dd>
|
|
246
|
+
returns the names of all attributes of the variable.</dd>
|
|
247
|
+
<dt><h4><a name="label-42" id="label-42"><code>name</code></a></h4></dt><!-- RDLabel: "name" -->
|
|
248
|
+
<dd>
|
|
249
|
+
returns the name of the variable. </dd>
|
|
250
|
+
<dt><h4><a name="label-43" id="label-43"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
|
|
251
|
+
<dd>
|
|
252
|
+
returns the number of dimensions in the file (always 4). </dd>
|
|
253
|
+
<dt><h4><a name="label-44" id="label-44"><code>rank</code></a></h4></dt><!-- RDLabel: "rank" -->
|
|
254
|
+
<dd>
|
|
255
|
+
alias of ndims</dd>
|
|
256
|
+
<dt><h4><a name="label-45" id="label-45"><code>vartype</code></a></h4></dt><!-- RDLabel: "vartype" -->
|
|
257
|
+
<dd>
|
|
258
|
+
returns "sfloat" in order to behave as NetCDFVar#vartype. </dd>
|
|
259
|
+
<dt><h4><a name="label-46" id="label-46"><code>natts</code></a></h4></dt><!-- RDLabel: "natts" -->
|
|
260
|
+
<dd>
|
|
261
|
+
returns the number of attributes of the variable.</dd>
|
|
262
|
+
<dt><h4><a name="label-47" id="label-47"><code>file</code></a></h4></dt><!-- RDLabel: "file" -->
|
|
263
|
+
<dd>
|
|
264
|
+
returns the file name that controls the variable. </dd>
|
|
265
|
+
<dt><h4><a name="label-48" id="label-48"><code>get_att( <var>name</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "get_att" -->
|
|
266
|
+
<dd>
|
|
267
|
+
returns tha value of the attribute of the variable.</dd>
|
|
268
|
+
<dt><h4><a name="label-49" id="label-49"><code>put_att( <var>name</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
|
|
269
|
+
<dd>
|
|
270
|
+
<p>set an attribute of the variable. </p>
|
|
271
|
+
<p>ARGUMENTS</p>
|
|
272
|
+
<ul>
|
|
273
|
+
<li>name (String): name of an attribute</li>
|
|
274
|
+
<li>value (String): value of an attribute</li>
|
|
275
|
+
</ul></dd>
|
|
276
|
+
<dt><h4><a name="label-50" id="label-50"><code>get(<var>hash</var>=<var>nil</var>)</code></a></h4></dt><!-- RDLabel: "get" -->
|
|
277
|
+
<dd>
|
|
278
|
+
<p>returns values of the variable.</p>
|
|
279
|
+
<p>ARGUMENTS</p>
|
|
280
|
+
<ul>
|
|
281
|
+
<li>hash (Hash) : Optional argument to limit the portion of the
|
|
282
|
+
variable to output values. If omitted, the whole variable is
|
|
283
|
+
subject to the output. This argument accepts a Hash whose keys
|
|
284
|
+
contain either "index" or a combination of "start","end", and
|
|
285
|
+
"stride". The value of "index" points the index of a scalar
|
|
286
|
+
portion of the variable. The other case is used to designate a
|
|
287
|
+
regularly ordered subset, where "start" and "end" specifies
|
|
288
|
+
bounds in each dimension and "stride" specifies intervals in
|
|
289
|
+
it. As in Array "start", "end", and "index" can take negative
|
|
290
|
+
values to specify index backward from the end. However,
|
|
291
|
+
"stride" has to be positive, so reversing the array must be
|
|
292
|
+
done afterwards if you like.</li>
|
|
293
|
+
</ul>
|
|
294
|
+
<p>RETURN VALUE</p>
|
|
295
|
+
<ul>
|
|
296
|
+
<li>an NArray object</li>
|
|
297
|
+
</ul>
|
|
298
|
+
<p>REMARK
|
|
299
|
+
"stride","index" is not supported yet.</p></dd>
|
|
300
|
+
<dt><h4><a name="label-51" id="label-51"><code>[]</code></a></h4></dt><!-- RDLabel: "[]" -->
|
|
301
|
+
<dd>
|
|
302
|
+
Same as GrADSVar#get but a subset is specified as in the method []
|
|
303
|
+
of NArray. </dd>
|
|
304
|
+
</dl>
|
|
305
|
+
|
|
306
|
+
</body>
|
|
307
|
+
</html>
|
data/doc/grib.html
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
1
|
+
<?xml version="1.0" ?>
|
|
2
|
+
<!DOCTYPE html
|
|
3
|
+
PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
|
|
4
|
+
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
5
|
+
<html xmlns="http://www.w3.org/1999/xhtml">
|
|
6
|
+
<head>
|
|
7
|
+
<title>../lib/numru/gphys/grib.rb</title>
|
|
8
|
+
</head>
|
|
9
|
+
<body>
|
|
10
|
+
<h1><a name="label-0" id="label-0">Status</a></h1><!-- RDLabel: "Status" -->
|
|
11
|
+
<ul>
|
|
12
|
+
<li>only a Lon-Lat coordinate is supported</li>
|
|
13
|
+
<li>only simple pakking is supported</li>
|
|
14
|
+
<li>variable list is not complete for NCEP and ECMWF</li>
|
|
15
|
+
</ul>
|
|
16
|
+
<p>if ! 'a'.respond_to?(:ord)</p>
|
|
17
|
+
<pre>class String
|
|
18
|
+
def ord
|
|
19
|
+
self[0]
|
|
20
|
+
end
|
|
21
|
+
end</pre>
|
|
22
|
+
<p>end
|
|
23
|
+
if ! 'a'.respond_to?(:getbyte)</p>
|
|
24
|
+
<pre>class String
|
|
25
|
+
def getbyte(i)
|
|
26
|
+
self[i]
|
|
27
|
+
end
|
|
28
|
+
end</pre>
|
|
29
|
+
<p>end</p>
|
|
30
|
+
<pre>def str2uint1(str)
|
|
31
|
+
return nil if str.length==0
|
|
32
|
+
return str.ord
|
|
33
|
+
end
|
|
34
|
+
def str2uint2(str)
|
|
35
|
+
return nil if str.length==0
|
|
36
|
+
return (str.ord<<8)+str.getbyte(1)
|
|
37
|
+
end
|
|
38
|
+
def str2uint3(str)
|
|
39
|
+
return nil if str.length==0
|
|
40
|
+
return (str.ord<<16)+(str.getbyte(1)<<8)+str.getbyte(2)
|
|
41
|
+
end</pre>
|
|
42
|
+
<pre>index[1].each{|j|
|
|
43
|
+
jj = j-index[1].first
|
|
44
|
+
sb = j*nlon+index[0].first
|
|
45
|
+
sb = sb-map[true,0..jj-1].count_false if jj>0
|
|
46
|
+
sb = sb*nbits_pack
|
|
47
|
+
eb = sb+mask[true,j].count_true*nbits_pack
|
|
48
|
+
if sb!=eb
|
|
49
|
+
var[mask[true,j].where,jj] = get_value(@sgm.file,@pos+8,sb,eb,nbits_pack,nstep)
|
|
50
|
+
end
|
|
51
|
+
}</pre>
|
|
52
|
+
<pre>sb = index[1].first*nlon*nbits_pack
|
|
53
|
+
eb = (index[1].end+1)*nlon*nbits_pack
|
|
54
|
+
var = get_value(@sgm.file,@pos+8,sb,eb,nbits_pack,nstep)
|
|
55
|
+
var.reshape!(nlon, var.length/nlon)
|
|
56
|
+
var = var[index[0],true]</pre>
|
|
57
|
+
<pre>eb = nlen*nbits_pack
|
|
58
|
+
var = get_value(@sgm.file,@pos+8,0,eb,nbits_pack,nstep)
|
|
59
|
+
var.reshape!(nlon,nlat)</pre>
|
|
60
|
+
<h1><a name="label-1" id="label-1">NumRu::GPhys::Grib -- a class for Grib datasets</a></h1><!-- RDLabel: "NumRu::GPhys::Grib ­­ a class for Grib datasets" -->
|
|
61
|
+
<h2><a name="label-2" id="label-2">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
62
|
+
<dl>
|
|
63
|
+
<dt><h4><a name="label-3" id="label-3"><code>Grib.new(<var>filename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "Grib.new" -->
|
|
64
|
+
<dd>
|
|
65
|
+
<p>make a new Grib object.</p>
|
|
66
|
+
<p>ARGUMENTS</p>
|
|
67
|
+
<ul>
|
|
68
|
+
<li>filename (String): name of the file to open</li>
|
|
69
|
+
<li>mode (String): IO mode. "r" (read only) or "w" (write only).</li>
|
|
70
|
+
</ul></dd>
|
|
71
|
+
<dt><h4><a name="label-4" id="label-4"><code>Grib.open(<var>filename</var>)</code></a></h4></dt><!-- RDLabel: "Grib.open" -->
|
|
72
|
+
<dd>
|
|
73
|
+
open a Grib file.</dd>
|
|
74
|
+
<dt><h4><a name="label-5" id="label-5"><code>Grib.create(<var>filename</var>)</code></a></h4></dt><!-- RDLabel: "Grib.create" -->
|
|
75
|
+
<dd>
|
|
76
|
+
create a Grib file.</dd>
|
|
77
|
+
<dt><h4><a name="label-6" id="label-6"><code>Grib.is_aGrib?(<var>filename</var>)</code></a></h4></dt><!-- RDLabel: "Grib.is_aGrib?" -->
|
|
78
|
+
<dd>
|
|
79
|
+
return true when file is a Grib dataset</dd>
|
|
80
|
+
</dl>
|
|
81
|
+
<h2><a name="label-7" id="label-7">Methods</a></h2><!-- RDLabel: "Methods" -->
|
|
82
|
+
<dl>
|
|
83
|
+
<dt><h4><a name="label-8" id="label-8"><code>close</code></a></h4></dt><!-- RDLabel: "close" -->
|
|
84
|
+
<dt><h4><a name="label-9" id="label-9"><code>parse</code></a></h4></dt><!-- RDLabel: "parse" -->
|
|
85
|
+
<dt><h4><a name="label-10" id="label-10"><code>path</code></a></h4></dt><!-- RDLabel: "path" -->
|
|
86
|
+
<dt><h4><a name="label-11" id="label-11"><code>var_names</code></a></h4></dt><!-- RDLabel: "var_names" -->
|
|
87
|
+
<dt><h4><a name="label-12" id="label-12"><code>var( <var>name</var> )</code></a></h4></dt><!-- RDLabel: "var" -->
|
|
88
|
+
<dt><h4><a name="label-13" id="label-13"><code>def_var( <var>name</var> )</code></a></h4></dt><!-- RDLabel: "def_var" -->
|
|
89
|
+
<dt><h4><a name="label-14" id="label-14"><code>enddef</code></a></h4></dt><!-- RDLabel: "enddef" -->
|
|
90
|
+
<dt><h4><a name="label-15" id="label-15"><code>write</code></a></h4></dt><!-- RDLabel: "write" -->
|
|
91
|
+
</dl>
|
|
92
|
+
<h1><a name="label-16" id="label-16">NumRu::GPhys::GribDim</a></h1><!-- RDLabel: "NumRu::GPhys::GribDim" -->
|
|
93
|
+
<h2><a name="label-17" id="label-17">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
94
|
+
<dl>
|
|
95
|
+
<dt><h4><a name="label-18" id="label-18"><code>new( <var>vat</var>, <var>name</var>, <var>length</var> )</code></a></h4></dt><!-- RDLabel: "new" -->
|
|
96
|
+
</dl>
|
|
97
|
+
<h2><a name="label-19" id="label-19">Methods</a></h2><!-- RDLabel: "Methods" -->
|
|
98
|
+
<dl>
|
|
99
|
+
<dt><h4><a name="label-20" id="label-20"><code>var</code></a></h4></dt><!-- RDLabel: "var" -->
|
|
100
|
+
<dt><h4><a name="label-21" id="label-21"><code>length</code></a></h4></dt><!-- RDLabel: "length" -->
|
|
101
|
+
<dt><h4><a name="label-22" id="label-22"><code>name</code></a></h4></dt><!-- RDLabel: "name" -->
|
|
102
|
+
<dt><h4><a name="label-23" id="label-23"><code>typecode</code></a></h4></dt><!-- RDLabel: "typecode" -->
|
|
103
|
+
<dt><h4><a name="label-24" id="label-24"><code>get</code></a></h4></dt><!-- RDLabel: "get" -->
|
|
104
|
+
<dt><h4><a name="label-25" id="label-25"><code>[<var>indices</var>]</code></a></h4></dt><!-- RDLabel: "[]" -->
|
|
105
|
+
<dt><h4><a name="label-26" id="label-26"><code>put_att(<var>key</var>,<var>val</var>)</code></a></h4></dt><!-- RDLabel: "put_att" -->
|
|
106
|
+
<dt><h4><a name="label-27" id="label-27"><code>set_att(<var>key</var>,<var>val</var>)</code></a></h4></dt><!-- RDLabel: "set_att" -->
|
|
107
|
+
<dt><h4><a name="label-28" id="label-28"><code>att(<var>key</var>)</code></a></h4></dt><!-- RDLabel: "att" -->
|
|
108
|
+
<dt><h4><a name="label-29" id="label-29"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
|
|
109
|
+
<dt><h4><a name="label-30" id="label-30"><code>inspect</code></a></h4></dt><!-- RDLabel: "inspect" -->
|
|
110
|
+
</dl>
|
|
111
|
+
<h1><a name="label-31" id="label-31">NumRu::GPhys::GribVar</a></h1><!-- RDLabel: "NumRu::GPhys::GribVar" -->
|
|
112
|
+
<h2><a name="label-32" id="label-32">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
|
|
113
|
+
<dl>
|
|
114
|
+
<dt><h4><a name="label-33" id="label-33"><code>always_time_seq=(<var>t_or_f</var>)</code></a></h4></dt><!-- RDLabel: "always_time_seq=" -->
|
|
115
|
+
</dl>
|
|
116
|
+
<p>If true is given, a GribVar will always have a time dimension,
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even when the time is unique (i.e., length of the time coordinate is 1).</p>
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<dl>
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<dt><h4><a name="label-34" id="label-34"><code>new( <var>file</var>, <var>name</var>, <var>obj</var>, <var>dims</var> )</code></a></h4></dt><!-- RDLabel: "new" -->
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</dl>
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<h2><a name="label-35" id="label-35">Methods</a></h2><!-- RDLabel: "Methods" -->
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<dl>
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<dt><h4><a name="label-36" id="label-36"><code>file</code></a></h4></dt><!-- RDLabel: "file" -->
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<dt><h4><a name="label-37" id="label-37"><code>name</code></a></h4></dt><!-- RDLabel: "name" -->
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<dt><h4><a name="label-38" id="label-38"><code>rank</code></a></h4></dt><!-- RDLabel: "rank" -->
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<dt><h4><a name="label-39" id="label-39"><code>total</code></a></h4></dt><!-- RDLabel: "total" -->
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<dt><h4><a name="label-40" id="label-40"><code>set_var</code></a></h4></dt><!-- RDLabel: "set_var" -->
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<dt><h4><a name="label-41" id="label-41"><code>set_miss</code></a></h4></dt><!-- RDLabel: "set_miss" -->
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<dt><h4><a name="label-42" id="label-42"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
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<dt><h4><a name="label-43" id="label-43"><code>dim( <var>index</var> )</code></a></h4></dt><!-- RDLabel: "dim" -->
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<dt><h4><a name="label-44" id="label-44"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
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<dt><h4><a name="label-45" id="label-45"><code>def_dim(<var>name</var>,<var>index</var>)</code></a></h4></dt><!-- RDLabel: "def_dim" -->
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<dt><h4><a name="label-46" id="label-46"><code>put_att( <var>key</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
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<dt><h4><a name="label-47" id="label-47"><code>set_att( <var>key</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "set_att" -->
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<dt><h4><a name="label-48" id="label-48"><code>att( <var>key</var> )</code></a></h4></dt><!-- RDLabel: "att" -->
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<dt><h4><a name="label-49" id="label-49"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
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<dt><h4><a name="label-50" id="label-50"><code>shape</code></a></h4></dt><!-- RDLabel: "shape" -->
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<dt><h4><a name="label-51" id="label-51"><code>typecode</code></a></h4></dt><!-- RDLabel: "typecode" -->
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<dt><h4><a name="label-52" id="label-52"><code>get( <var>indics</var> )</code></a></h4></dt><!-- RDLabel: "get" -->
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<dt><h4><a name="label-53" id="label-53"><code>[ <var>indics</var> ]</code></a></h4></dt><!-- RDLabel: "[]" -->
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<dt><h4><a name="label-54" id="label-54"><code>inspect</code></a></h4></dt><!-- RDLabel: "inspect" -->
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</dl>
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<pre>if pds1.time_range!=pds2.time_range
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warn("time range is not same: #{pds1.time_range} != #{pds2.time_range}")
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return true
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end</pre>
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</body>
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</html>
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