gphys 1.1.1 → 1.2.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (369) hide show
  1. data/.gitignore +17 -0
  2. data/ChangeLog +221 -0
  3. data/Gemfile +4 -0
  4. data/LICENSE.txt +18 -30
  5. data/README +23 -26
  6. data/README.md +29 -0
  7. data/Rakefile +1 -56
  8. data/bin/gpaop +2 -1
  9. data/bin/gpcut +3 -2
  10. data/bin/gpedit +6 -2
  11. data/bin/gpmath +3 -2
  12. data/bin/gpmaxmin +3 -2
  13. data/bin/gpprint +2 -1
  14. data/bin/gpvect +28 -5
  15. data/bin/gpview +43 -5
  16. data/extconf.rb +5 -6
  17. data/gphys.gemspec +34 -0
  18. data/interpo.c +63 -24
  19. data/lib/gphys.rb +2 -0
  20. data/lib/numru/dclext.rb +2636 -0
  21. data/lib/numru/derivative.rb +53 -12
  22. data/lib/numru/ganalysis/eof.rb +4 -0
  23. data/lib/numru/ganalysis/histogram.rb +73 -5
  24. data/lib/numru/ganalysis/met.rb +163 -2
  25. data/lib/numru/ganalysis/planet.rb +230 -20
  26. data/lib/numru/ggraph.rb +147 -2247
  27. data/lib/numru/gphys/assoccoords.rb +19 -3
  28. data/lib/numru/gphys/axis.rb +1 -1
  29. data/lib/numru/gphys/coordmapping.rb +2 -2
  30. data/lib/numru/gphys/derivative.rb +56 -13
  31. data/lib/numru/gphys/gphys.rb +17 -1
  32. data/lib/numru/gphys/gphys_grads_io.rb +6 -5
  33. data/lib/numru/gphys/gphys_grib_io.rb +6 -6
  34. data/lib/numru/gphys/gphys_io.rb +25 -6
  35. data/lib/numru/gphys/grads_gridded.rb +31 -29
  36. data/lib/numru/gphys/grib.rb +13 -9
  37. data/lib/numru/gphys/interpolate.rb +153 -29
  38. data/lib/numru/gphys/unumeric.rb +29 -6
  39. data/lib/numru/gphys/varray.rb +9 -0
  40. data/lib/numru/gphys/varraygrib.rb +70 -8
  41. data/lib/version.rb +3 -0
  42. metadata +247 -531
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  44. data/doc/attributenetcdf.html +0 -15
  45. data/doc/axis.html +0 -376
  46. data/doc/coordmapping.html +0 -111
  47. data/doc/coordtransform.html +0 -36
  48. data/doc/derivative/gphys-derivative.html +0 -80
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- <head>
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- <title>../bin/gpview</title>
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- </head>
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- <body>
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- <h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
11
- <p>gpview - quick viewer for the values of a variable specified by a gtool4-type URL. </p>
12
- <ol>
13
- <li>for 1-dimensional variable, make line plot.</li>
14
- <li>for 2-dimensional variable, make contour/tone plot.</li>
15
- <li>for 3/more-dimensional variable, make contour/tone plot,
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- select first 2D. possible to make animation.</li>
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- </ol>
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- <h1><a name="label-1" id="label-1">USAGE</a></h1><!-- RDLabel: "USAGE" -->
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- <p>The first command form is </p>
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- <pre>% gpview [options] gturl1 gturl2 gturl3 ...</pre>
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- <p>where the format of the gturl is</p>
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- <pre>path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]</pre>
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- <p>The second commnad form is </p>
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- <pre>% gpview --var url [options] gtfile1 gtfile2 ...</pre>
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- <p>where the format of the url is </p>
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- <pre>varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]</pre>
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- <h1><a name="label-2" id="label-2">OPTIONS</a></h1><!-- RDLabel: "OPTIONS" -->
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- <p>if you want to know more description, please read</p>
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- <pre>http://ruby.gfd-dennou.org/products/gphys/doc/gpview.html</pre>
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- <h2><a name="label-3" id="label-3">GLOBAL OPTIONS</a></h2><!-- RDLabel: "GLOBAL OPTIONS" -->
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- <dl>
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- <dt><h4><a name="label-4" id="label-4">--help:</a></h4></dt><!-- RDLabel: "&shy;&shy;help:" -->
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- <dd>
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- print this message.
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- </dd>
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- <dt><h4><a name="label-5" id="label-5">--var url:</a></h4></dt><!-- RDLabel: "&shy;&shy;var url:" -->
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- <dd>
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- set the variable name and slicing parameters.
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- </dd>
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- <dt><h4><a name="label-6" id="label-6">--wsn [1-4]:</a></h4></dt><!-- RDLabel: "&shy;&shy;wsn [1-4]:" -->
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- <dd>
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- set work staion number. each number represent output device:
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- 1 : X window.
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- 2 : PS file. (named dcl.ps)
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- 3 : Tcl/Tk file.
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- 4 : GTK Windows (depend on dcl-5.3)
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- </dd>
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- <dt><h4><a name="label-7" id="label-7">--clrmap [1-]:</a></h4></dt><!-- RDLabel: "&shy;&shy;clrmap [1-]:" -->
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- <dd>
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- set colormap to draw tone/contour.
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- </dd>
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- <dt><h4><a name="label-8" id="label-8">--itr [1-4,5-7,10-15,20-23,30-33]:</a></h4></dt><!-- RDLabel: "&shy;&shy;itr [1-4,5-7,10-15,20-23,30-33]:" -->
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- <dd>
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- set axis scale. default is 1.
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- 1 : linear scale for x/y axis
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- 2 : linear scale for x , log scale for y axis
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- 3 : log scale for x , linear scale for y axis
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- 4 : log scale for x/y axis
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- </dd>
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- <dt><h4><a name="label-9" id="label-9">--similar [simfac,vxoff,vyoff]:</a></h4></dt><!-- RDLabel: "&shy;&shy;similar [simfac,vxoff,vyoff]:" -->
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- <dd>
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- (for 5&lt;=itr&lt;=7) set similarity parameters which are fed in DCL.grssim.
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- </dd>
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- <dt><h4><a name="label-10" id="label-10">--map_axis [uxc,uyc,rot]:</a></h4></dt><!-- RDLabel: "&shy;&shy;map_axis [uxc,uyc,rot]:" -->
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- <dd>
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- (for 10&lt;=itr&lt;=33) set mapping parameters which are fed in DCL.umpcnt.
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- </dd>
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- <dt><h4><a name="label-11" id="label-11">--title:</a></h4></dt><!-- RDLabel: "&shy;&shy;title:" -->
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- <dd>
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- set title of figure
71
- </dd>
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- <dt><h4><a name="label-12" id="label-12">--aspect &lt;aspect&gt;:</a></h4></dt><!-- RDLabel: "&shy;&shy;aspect <aspect>:" -->
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- <dd>
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- set aspect ratio of Viewport. default is 2.0.
75
- </dd>
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- <dt><h4><a name="label-13" id="label-13">--noannotate:</a></h4></dt><!-- RDLabel: "&shy;&shy;noannotate:" -->
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- <dd>
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- not draw annotations.
79
- </dd>
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- <dt><h4><a name="label-14" id="label-14">--animate/anim &lt;dim&gt;:</a></h4></dt><!-- RDLabel: "&shy;&shy;animate/anim <dim>:" -->
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- <dd>
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- plot animation along &lt;dim&gt;. &lt;dim&gt; must be name of dimension.
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- </dd>
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- <dt><h4><a name="label-15" id="label-15">--alternate, --Ga:</a></h4></dt><!-- RDLabel: "&shy;&shy;alternate, &shy;&shy;Ga:" -->
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- <dd>
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- enable to backing store.
87
- </dd>
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- <dt><h4><a name="label-16" id="label-16">--nowait, --Gw:</a></h4></dt><!-- RDLabel: "&shy;&shy;nowait, &shy;&shy;Gw:" -->
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- <dd>
90
- not wait for any actions if animate
91
- </dd>
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- <dt><h4><a name="label-17" id="label-17">--reverse, --Gr:</a></h4></dt><!-- RDLabel: "&shy;&shy;reverse, &shy;&shy;Gr:" -->
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- <dd>
94
- plot animation reversible if animate
95
- </dd>
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- <dt><h4><a name="label-18" id="label-18">--smooth, --Gaw:</a></h4></dt><!-- RDLabel: "&shy;&shy;smooth, &shy;&shy;Gaw:" -->
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- <dd>
98
- equal to --anlternate &amp;&amp; --nowait
99
- </dd>
100
- <dt><h4><a name="label-19" id="label-19">--exch:</a></h4></dt><!-- RDLabel: "&shy;&shy;exch:" -->
101
- <dd>
102
- exchange(transpose) x/y axis.
103
- </dd>
104
- <dt><h4><a name="label-20" id="label-20">--mean &lt;dim&gt;:</a></h4></dt><!-- RDLabel: "&shy;&shy;mean <dim>:" -->
105
- <dd>
106
- mean along axis &lt;dim&gt;.
107
- </dd>
108
- <dt><h4><a name="label-21" id="label-21">--m, --map &lt;map_type&gt;:</a></h4></dt><!-- RDLabel: "&shy;&shy;m, &shy;&shy;map <map_type>:" -->
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- <dd>
110
- plot map. itr number must be set. this option is neglect if itr
111
- number is 1-4. abailable map type is coast_world, border_world,
112
- plate_world, state_usa, coast_japan, pref_japan
113
- </dd>
114
- <dt><h4><a name="label-22" id="label-22">--operation &lt;math_func&gt;:</a></h4></dt><!-- RDLabel: "&shy;&shy;operation <math_func>:" -->
115
- <dd>
116
- operation of the specified math function on the data.
117
- &lt;math_func&gt; should be a math function with one argument
118
- such as log10, sqrt, sin, etc.
119
- </dd>
120
- </dl>
121
- <h2><a name="label-23" id="label-23">LINE/MARK OPTIONS</a></h2><!-- RDLabel: "LINE/MARK OPTIONS" -->
122
- <dl>
123
- <dt><h4><a name="label-24" id="label-24">--line:</a></h4></dt><!-- RDLabel: "&shy;&shy;line:" -->
124
- <dd>
125
- make line plot forced. (about first 1D)
126
- </dd>
127
- <dt><h4><a name="label-25" id="label-25">--mark:</a></h4></dt><!-- RDLabel: "&shy;&shy;mark:" -->
128
- <dd>
129
- make mark plot forced. (about first 1D)
130
- </dd>
131
- <dt><h4><a name="label-26" id="label-26">--index:</a></h4></dt><!-- RDLabel: "&shy;&shy;index:" -->
132
- <dd>
133
- set DCL line index, which set the color/thickness of the line
134
- primitive. please see DCL documents.
135
- </dd>
136
- <dt><h4><a name="label-27" id="label-27">--type:</a></h4></dt><!-- RDLabel: "&shy;&shy;type:" -->
137
- <dd>
138
- set line type.
139
- </dd>
140
- <dt><h4><a name="label-28" id="label-28">--range [min:max]</a></h4></dt><!-- RDLabel: "&shy;&shy;range [min:max]" -->
141
- <dd>
142
- set min/max value for line plot. min or max must be set.
143
- </dd>
144
- <dt><h4><a name="label-29" id="label-29">--overplot</a></h4></dt><!-- RDLabel: "&shy;&shy;overplot" -->
145
- <dd>
146
- set number of lines on each figure
147
- </dd>
148
- </dl>
149
- <h2><a name="label-30" id="label-30">CONTOUR/TONE OPTIONS</a></h2><!-- RDLabel: "CONTOUR/TONE OPTIONS" -->
150
- <dl>
151
- <dt><h4><a name="label-31" id="label-31">--shade:</a></h4></dt><!-- RDLabel: "&shy;&shy;shade:" -->
152
- <dd>
153
- make contour and tone plot.
154
- </dd>
155
- <dt><h4><a name="label-32" id="label-32">--noshade:</a></h4></dt><!-- RDLabel: "&shy;&shy;noshade:" -->
156
- <dd>
157
- make contour plot, without tone.
158
- </dd>
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- <dt><h4><a name="label-33" id="label-33">--nocont:</a></h4></dt><!-- RDLabel: "&shy;&shy;nocont:" -->
160
- <dd>
161
- make tone plot, without contour.
162
- </dd>
163
- <dt><h4><a name="label-34" id="label-34">--range [min:max]:</a></h4></dt><!-- RDLabel: "&shy;&shy;range [min:max]:" -->
164
- <dd>
165
- set min/max value for contour/tone plot. min or max must be set.
166
- </dd>
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- <dt><h4><a name="label-35" id="label-35">--crange:</a></h4></dt><!-- RDLabel: "&shy;&shy;crange:" -->
168
- <dd>
169
- set min/max value for contour plot. this is more dominant than --range
170
- </dd>
171
- <dt><h4><a name="label-36" id="label-36">--srange:</a></h4></dt><!-- RDLabel: "&shy;&shy;srange:" -->
172
- <dd>
173
- set min/max value for tone plot. this is more dominant than --interval/int
174
- </dd>
175
- <dt><h4><a name="label-37" id="label-37">--interval,--int [num]:</a></h4></dt><!-- RDLabel: "&shy;&shy;interval,&shy;&shy;int [num]:" -->
176
- <dd>
177
- set interval value for contour/tone plot. set the number of lines if
178
- you set negative value.
179
- </dd>
180
- <dt><h4><a name="label-38" id="label-38">--cint:</a></h4></dt><!-- RDLabel: "&shy;&shy;cint:" -->
181
- <dd>
182
- set interval value for contour plot. this is more dominant
183
- than --interval/int
184
- </dd>
185
- <dt><h4><a name="label-39" id="label-39">--sint:</a></h4></dt><!-- RDLabel: "&shy;&shy;sint:" -->
186
- <dd>
187
- set interval value for tone plot. this is more dominant than --interval/int.
188
- </dd>
189
- <dt><h4><a name="label-40" id="label-40">--levels:</a></h4></dt><!-- RDLabel: "&shy;&shy;levels:" -->
190
- <dd>
191
- set values of contour/tone levels.
192
- </dd>
193
- <dt><h4><a name="label-41" id="label-41">--clevels:</a></h4></dt><!-- RDLabel: "&shy;&shy;clevels:" -->
194
- <dd>
195
- set values of contour levels.
196
- </dd>
197
- <dt><h4><a name="label-42" id="label-42">--slevels:</a></h4></dt><!-- RDLabel: "&shy;&shy;slevels:" -->
198
- <dd>
199
- set tone of contour levels.
200
- </dd>
201
- <dt><h4><a name="label-43" id="label-43">--patterns:</a></h4></dt><!-- RDLabel: "&shy;&shy;patterns:" -->
202
- <dd>
203
- set each patterns for tone plot.
204
- </dd>
205
- <dt><h4><a name="label-44" id="label-44">--nocolorbar:</a></h4></dt><!-- RDLabel: "&shy;&shy;nocolorbar:" -->
206
- <dd>
207
- do not draw color bar
208
- </dd>
209
- <dt><h4><a name="label-45" id="label-45">--nozero:</a></h4></dt><!-- RDLabel: "&shy;&shy;nozero:" -->
210
- <dd>
211
- do not draw zero contour
212
- </dd>
213
- </dl>
214
- <h2><a name="label-46" id="label-46">EXAMPLES</a></h2><!-- RDLabel: "EXAMPLES" -->
215
- <p>For a single GPhys variable, </p>
216
- <pre>% gpview data.nc@temp
217
- % gpview data.nc@temp,lon=130:150,lat=0:90:2
218
- % gpview --nocont data.nc@temp,lon=130:150,lat=0
219
- % gpview --noshade data.nc@temp,lon=130:150,lat=0
220
- % gpview --mean lon data.nc@temp,lon=130:150,lat=0
221
- % gpview --exch data.nc@temp,lon=130:150,lat=0
222
- % gpview --animate lon data.nc@temp,lon=130:150
223
- % gpview --animate lon --alternate data.nc@temp
224
- % gpview --smooth lon data.nc@temp,lon=130:150
225
- % gpview --levels 0,10,20,30 --pattern 30999,40999,50999,60999,70999 data.nc@temp
226
- % gpview --overplot=3 --anim t data.nc@temp,lon=0
227
- % gpview --mark data.nc@temp,lon=0,lat=0
228
- % gpview --operation log10 data.nc@temp,lon=0</pre>
229
- <p>For multiple GPhys variables, </p>
230
- <pre>% gpview data1.nc@temp data2.nc@temp
231
- % gpview data1.nc@temp,lon=130:150 data2.nc@temp,lon=150:170
232
- % gpview --overplot=3 --anim t data.nc@temp,lon=0 data.nc@temp,lon=10
233
- % gpview --var temp,lon=130:150 data?.nc
234
- % gpview --anim t --var temp,lon=130:150 data*.nc </pre>
235
- <h2><a name="label-47" id="label-47">HISTORY</a></h2><!-- RDLabel: "HISTORY" -->
236
- <pre>2004/12/14 D Tsukahara &amp;&amp; T Horinouti(parse_gturl)
237
- 2005/01/08 D Tsukahara (add option --exch and able to invalid value)
238
- 2005/01/09 D Tsukahara (add option --animate, smooth, alternate, index )
239
- 2005/01/10 D Tsukahara (transpose axis with attr "positive:down" ,
240
- abailable loopsense_flag. )
241
- 2005/01/10 D Tsukahara (implement GGraph::color_bar, and margin_info,
242
- which file name, date, and toolname. )
243
- 2005/01/11 D Tsukahara ( 1. write document about OPTIONS.
244
- 2. add many options. more info please see document. )
245
- 2005/01/23 S Takehiro (add option --similar, map_axis)
246
- 2005/02/09 D Tsukahara &amp;&amp; M Nakano (add option --reverse, --Gr, --map)
247
- 2005/02/10 D Tsukahara (change option parser (getopts =&gt; getoptlong))
248
- 2005/02/24 D Tsukahara (apply --range for line plot)
249
- 2005/06/15 S Takehiro (add option --levels, --clevels, --slevels, --patterns)
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- 2005/06/17 S Takehiro (missing_value attribute setting removed)
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- 2005/06/22 S Takehiro (debug, clipping control added to GGraph::annotate)
252
- 2005/06/23 S Takehiro (debug, option --title implemented)
253
- 2005/07/15 S Takehiro (option --noannotate implemented)
254
- 2005/08/07 S Takehiro (option --overplot implemented)
255
- 2005/08/09 S Takehiro &amp;&amp; T Horinouchi (add option --help and help function.
256
- URL information corrected. )
257
- 2005/08/23 S Takehiro (multiple Gphys variables plotting
258
- and option --var implemented)
259
- 2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
260
- 2005/10/30 S Takehiro (option --animate recoverd)
261
- 2005/10/31 S Takehiro (option --smooth bug fixed)
262
- 2006/03/07 M Nakano (option --int bug fixed)
263
- 2007/10/03 S Takehiro (option --nocolorbar implemented)
264
- 2008/04/03 S Takehiro (option --nozero implemented)
265
- 2008/12/14 S Takehiro (option --mark implemented)
266
- 2010/03/10 Y SASAKI (change help block into RD format)
267
- 2011/01/14 T Tanigawa &amp;&amp; S Takehiro (option --operation implemented)</pre>
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-
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- </body>
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- </html>
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- <h1><a name="label-0" id="label-0">NAME</a></h1><!-- RDLabel: "NAME" -->
11
- <p>grads2nc_with_gphys - GrADS to NetCDF converter</p>
12
- <h1><a name="label-1" id="label-1">WARNING</a></h1><!-- RDLabel: "WARNING" -->
13
- <p>Not efficient if the GrADS file has many variables.</p>
14
- <h1><a name="label-2" id="label-2">USAGE</a></h1><!-- RDLabel: "USAGE" -->
15
- <pre>% grads2nc_with_gphys infilename outfilename [-v varname1 [varname2 ...]]</pre>
16
- <h1><a name="label-3" id="label-3">EXAMPLE</a></h1><!-- RDLabel: "EXAMPLE" -->
17
- <pre>% grads2nc_with_gphys ../testdata/T.jan.ctl tmp.nc
18
- % grads2nc_with_gphys ../testdata/T.jan.ctl tmp.nc -v T</pre>
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-
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- <head>
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- <title>../lib/numru/gphys/grads_gridded.rb</title>
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- </head>
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- <body>
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- <h1><a name="label-0" id="label-0">NumRu::GrADS_Gridded -- a class for GrADS gridded datasets</a></h1><!-- RDLabel: "NumRu::GrADS_Gridded &shy;&shy; a class for GrADS gridded datasets" -->
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- <p>by T Horinouchi and R Mizuta</p>
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- <h2><a name="label-1" id="label-1">Overview</a></h2><!-- RDLabel: "Overview" -->
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- <p>a GrADS_Gridded object corresponds to a GrADS control file,
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- through which the users can also access its binary data file(s).</p>
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- <h2><a name="label-2" id="label-2">Current Limitations</a></h2><!-- RDLabel: "Current Limitations" -->
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- <ul>
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- <li>option 365_day_calendar is not interpreted</li>
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- <li>Partial support of the "template" option
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- (only %y2,%y4,%m1,%m2,%d1,%d2,%h1,%h2,%n2)
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- (Time is assumed to be increasing monotonically).</li>
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- </ul>
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- <h2><a name="label-3" id="label-3">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
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- <dl>
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- <dt><h4><a name="label-4" id="label-4"><code>GrADS_Gridded.new(<var>ctlfilename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.new" -->
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- <dd>
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- same as GrADS_Gridded.open</dd>
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- <dt><h4><a name="label-5" id="label-5"><code>GrADS_Gridded.open(<var>ctlfilename</var>, <var>mode</var>="<var>r</var>")</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.open" -->
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- <dd>
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- <p>make a new GrADS_Gridded object. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>ctlfilename (String): name of the control file to open</li>
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- <li>mode (String): IO mode. "r" (read only) or "w" (write only).</li>
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- </ul>
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- <p>REMARK</p>
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- <ul>
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- <li>You can modify the object through instance methods even if mode=="r".
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- In that case, the modification will not be written in the original
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- control file.</li>
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- </ul></dd>
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- <dt><h4><a name="label-6" id="label-6"><code>GrADS_Gridded.create(<var>ctlfilename</var>, <var>noclobber</var>=<var>false</var>, <var>share</var>=<var>false</var>)</code></a></h4></dt><!-- RDLabel: "GrADS_Gridded.create" -->
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- <dd>
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- <p>make a new GrADS_Gridded object with creating a new control file</p>
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- <p>REMARK</p>
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- <ul>
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- <li>It is used with writing methods, but currently writing methods
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- does not work. </li>
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- </ul></dd>
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- </dl>
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- <h2><a name="label-7" id="label-7">Methods</a></h2><!-- RDLabel: "Methods" -->
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- <dl>
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- <dt><h4><a name="label-8" id="label-8"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
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- <dd>
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- returns the number of dimensions in the file (always 4). </dd>
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- <dt><h4><a name="label-9" id="label-9"><code>nvars</code></a></h4></dt><!-- RDLabel: "nvars" -->
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- <dd>
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- returns the number of variables in the file. </dd>
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- <dt><h4><a name="label-10" id="label-10"><code>natts</code></a></h4></dt><!-- RDLabel: "natts" -->
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- <dd>
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- returns the number of attributes of the variable.</dd>
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- <dt><h4><a name="label-11" id="label-11"><code>path</code></a></h4></dt><!-- RDLabel: "path" -->
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- <dd>
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- returns the path of the control file.</dd>
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- <dt><h4><a name="label-12" id="label-12"><code>put_att( <var>attname</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
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- <dd>
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- <p>set global attribute</p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>attrname (String): name of an attribute</li>
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- <li>value (String): value of an attribute</li>
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- </ul></dd>
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- <dt><h4><a name="label-13" id="label-13"><code>def_var(<var>name</var>="<var>noname</var>",<var>nlev</var>=<var>0</var>,<var>option</var>="<var>99</var>",<var>description</var>="")</code></a></h4></dt><!-- RDLabel: "def_var" -->
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- <dd>
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- <p>define a variable</p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>name (String): name of the variable</li>
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- <li>nlev (Integer): number of vertical levels</li>
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- <li>option (String): variable placement option
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- ("99": normal, "-1,30": transpose lon and lat)</li>
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- </ul></dd>
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- <dt><h4><a name="label-14" id="label-14"><code>var( <var>varname</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "var" -->
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- <dd>
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- <p>opens an existing variable in the file. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>varname (String): name of the variable to open</li>
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- </ul>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li>a GrADSVar object. </li>
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- </ul></dd>
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- <dt><h4><a name="label-15" id="label-15"><code>vars( <var>names</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "vars" -->
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- <dd>
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- <p>opens existing variables in the file. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>names (Array): names(String) of the variable to open</li>
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- </ul>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li>Array of GrADSVar objects.
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- returns all variables if names==nil</li>
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- </ul></dd>
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- <dt><h4><a name="label-16" id="label-16"><code>get_att( <var>key</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "get_att" -->
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- <dd>
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- returns tha value of the global attribute</dd>
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- <dt><h4><a name="label-17" id="label-17"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
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- <dd>
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- returns the names of all dimensions in the control file.</dd>
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- <dt><h4><a name="label-18" id="label-18"><code>var_names</code></a></h4></dt><!-- RDLabel: "var_names" -->
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- <dd>
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- returns the names of all variables in the control file.</dd>
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- <dt><h4><a name="label-19" id="label-19"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
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- <dd>
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- returns the names of all the global attributes.</dd>
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- <dt><h4><a name="label-20" id="label-20"><code>to_ctl</code></a></h4></dt><!-- RDLabel: "to_ctl" -->
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- <dd>
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- <p>returns the contents of the corresponding control file as a String.</p>
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- <p>REMARK</p>
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- <ul>
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- <li>The contents is reconstructed from the internal data of the object.
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- Therefore, even when the object is based on a read-only control file,
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- it is not necessarily the same as the original one. It is especially
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- true when the object was modified after it is opened.</li>
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- </ul></dd>
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- <dt><h4><a name="label-21" id="label-21"><code>get(<var>name</var>, <var>z</var>, <var>t</var>)</code></a></h4></dt><!-- RDLabel: "get" -->
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- <dd>
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- <p>reads the binary data and returns as a NArray.</p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>name (String): name of the variable to read</li>
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- <li>z (Integer, currently): vertical level to read (0,1,2,...; starting
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- from 0). Currently only one vertical levels must be chosen, but in the
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- future, it is planned to support multiple levels.</li>
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- <li>t (Integer, currently): time to read (0,1,2,...; starting
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- from 0). Currently only one time must be chosen, but in the
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- future, it is planned to support multiple times.</li>
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- </ul></dd>
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- <dt><h4><a name="label-22" id="label-22"><code>put(<var>ary</var>)</code></a></h4></dt><!-- RDLabel: "put" -->
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- <dd>
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- <p>writes the NArray on the binary data file. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>ary (NArray): data to write. </li>
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- </ul></dd>
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- <dt><h4><a name="label-23" id="label-23"><code>varnames</code></a></h4></dt><!-- RDLabel: "varnames" -->
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- <dd>
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- Returns names of the variable in the GrADS file as an Array in the order
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- placed.</dd>
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- <dt><h4><a name="label-24" id="label-24"><code>dimensions</code></a></h4></dt><!-- RDLabel: "dimensions" -->
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- <dd>
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- <p>Returns info on the four dimensions.</p>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li><p>an Array of 4 elements: dimension[0] for x, dimension[1] for y,
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- dimension[2] for z, and dimension[3] for t. Each of them is a
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- Hash like the following:</p>
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- <pre>{:name=&gt;"x",
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- :len=&gt;132,
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- :flag=&gt;"LINEAR",
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- :spec=&gt;"-0.7500 1.5000",
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- :start=&gt;-0.75, :increment=&gt;1.5,
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- :description=&gt;"longitude",
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- :units=&gt;"degrees_east"}</pre>
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- <p>Here, :len, :flag, and :spec are directly from the control file, while
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- others are derived properties for internal use. </p></li>
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- </ul>
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- <p>WARNING</p>
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- <ul>
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- <li>Each elements of the return value is not a clone but is a direct
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- association to an internal object of the object. Therefore, to
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- modify it is to modify the object. That is, dimensions[0][:len]=10
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- would actually change the internal variable, while dimensions[0]=nil
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- has no effect (the former is a substitution IN a Hash, while the latter
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- is a substitution OF the Hash).</li>
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- </ul></dd>
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- <dt><h4><a name="label-25" id="label-25"><code>get_dim(<var>dim</var>)</code></a></h4></dt><!-- RDLabel: "get_dim" -->
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- <dd>
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- <p>returns positions of a dimension as an NArray.</p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>dim (String): a dimension name</li>
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- </ul>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li>an NArray</li>
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- </ul></dd>
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- <dt><h4><a name="label-26" id="label-26"><code>title</code></a></h4></dt><!-- RDLabel: "title" -->
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- <dt><h4><a name="label-27" id="label-27"><code>title=</code></a></h4></dt><!-- RDLabel: "title=" -->
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- <dd>
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- get/set the title</dd>
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- <dt><h4><a name="label-28" id="label-28"><code>undef</code></a></h4></dt><!-- RDLabel: "undef" -->
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- <dt><h4><a name="label-29" id="label-29"><code>undef=</code></a></h4></dt><!-- RDLabel: "undef=" -->
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- <dd>
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- get/set the undef value</dd>
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- <dt><h4><a name="label-30" id="label-30"><code>dset</code></a></h4></dt><!-- RDLabel: "dset" -->
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- <dt><h4><a name="label-31" id="label-31"><code>dset=</code></a></h4></dt><!-- RDLabel: "dset=" -->
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- <dd>
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- get/set the dset string</dd>
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- </dl>
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- <h1><a name="label-32" id="label-32">GrADSVar -- a class for a variable of GrADS gridded datasets</a></h1><!-- RDLabel: "GrADSVar &shy;&shy; a class for a variable of GrADS gridded datasets" -->
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- <p>by R Mizuta</p>
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- <h2><a name="label-33" id="label-33">Overview</a></h2><!-- RDLabel: "Overview" -->
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- <p>a GrADSVar object corresponds to one variable in a GrADS control file.
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- It is intended to behave as a correspondent of a NetCDFVar object. </p>
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- <h2><a name="label-34" id="label-34">Current Limitations</a></h2><!-- RDLabel: "Current Limitations" -->
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- <ul>
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- <li>Only a part of the methods can work. </li>
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- <li>Writing methods are not supported. </li>
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- </ul>
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- <h2><a name="label-35" id="label-35">Class Methods</a></h2><!-- RDLabel: "Class Methods" -->
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- <dl>
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- <dt><h4><a name="label-36" id="label-36"><code>GrADSVar.new(<var>file</var>, <var>varname</var>)</code></a></h4></dt><!-- RDLabel: "GrADSVar.new" -->
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- <dd>
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- <p>make a new GrADSVar object. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>file (GrADS_Gridded or String): a GrADS_Gridded object or
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- a name of the control file to open</li>
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- <li>varname (String): name of the variable to open</li>
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- </ul></dd>
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- </dl>
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- <h2><a name="label-37" id="label-37">Methods</a></h2><!-- RDLabel: "Methods" -->
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- <dl>
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- <dt><h4><a name="label-38" id="label-38"><code>shape_ul0</code></a></h4></dt><!-- RDLabel: "shape_ul0" -->
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- <dd>
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- <p>returns the shape of the variable, but the length of the unlimited
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- dimension is set to zero.</p>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li>Array. [length of 0th dim, length of 1st dim,.. ]</li>
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- </ul></dd>
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- <dt><h4><a name="label-39" id="label-39"><code>shape_current</code></a></h4></dt><!-- RDLabel: "shape_current" -->
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- <dd>
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- <p>returns the current shape of the variable.</p>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li>Array. [length of 0th dim, length of 1st dim,.. ]</li>
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- </ul></dd>
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- <dt><h4><a name="label-40" id="label-40"><code>dim_names</code></a></h4></dt><!-- RDLabel: "dim_names" -->
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- <dd>
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- returns the names of all dimensions of the variable.</dd>
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- <dt><h4><a name="label-41" id="label-41"><code>att_names</code></a></h4></dt><!-- RDLabel: "att_names" -->
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- <dd>
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- returns the names of all attributes of the variable.</dd>
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- <dt><h4><a name="label-42" id="label-42"><code>name</code></a></h4></dt><!-- RDLabel: "name" -->
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- <dd>
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- returns the name of the variable. </dd>
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- <dt><h4><a name="label-43" id="label-43"><code>ndims</code></a></h4></dt><!-- RDLabel: "ndims" -->
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- <dd>
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- returns the number of dimensions in the file (always 4). </dd>
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- <dt><h4><a name="label-44" id="label-44"><code>rank</code></a></h4></dt><!-- RDLabel: "rank" -->
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- <dd>
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- alias of ndims</dd>
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- <dt><h4><a name="label-45" id="label-45"><code>vartype</code></a></h4></dt><!-- RDLabel: "vartype" -->
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- <dd>
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- returns "sfloat" in order to behave as NetCDFVar#vartype. </dd>
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- <dt><h4><a name="label-46" id="label-46"><code>natts</code></a></h4></dt><!-- RDLabel: "natts" -->
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- <dd>
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- returns the number of attributes of the variable.</dd>
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- <dt><h4><a name="label-47" id="label-47"><code>file</code></a></h4></dt><!-- RDLabel: "file" -->
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- <dd>
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- returns the file name that controls the variable. </dd>
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- <dt><h4><a name="label-48" id="label-48"><code>get_att( <var>name</var>=<var>nil</var> )</code></a></h4></dt><!-- RDLabel: "get_att" -->
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- <dd>
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- returns tha value of the attribute of the variable.</dd>
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- <dt><h4><a name="label-49" id="label-49"><code>put_att( <var>name</var>, <var>value</var> )</code></a></h4></dt><!-- RDLabel: "put_att" -->
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- <dd>
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- <p>set an attribute of the variable. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>name (String): name of an attribute</li>
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- <li>value (String): value of an attribute</li>
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- </ul></dd>
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- <dt><h4><a name="label-50" id="label-50"><code>get(<var>hash</var>=<var>nil</var>)</code></a></h4></dt><!-- RDLabel: "get" -->
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- <dd>
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- <p>returns values of the variable.</p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>hash (Hash) : Optional argument to limit the portion of the
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- variable to output values. If omitted, the whole variable is
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- subject to the output. This argument accepts a Hash whose keys
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- contain either "index" or a combination of "start","end", and
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- "stride". The value of "index" points the index of a scalar
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- portion of the variable. The other case is used to designate a
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- regularly ordered subset, where "start" and "end" specifies
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- bounds in each dimension and "stride" specifies intervals in
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- it. As in Array "start", "end", and "index" can take negative
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- values to specify index backward from the end. However,
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- "stride" has to be positive, so reversing the array must be
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- done afterwards if you like.</li>
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- </ul>
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- <p>RETURN VALUE</p>
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- <ul>
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- <li>an NArray object</li>
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- </ul>
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- <p>REMARK
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- "stride","index" is not supported yet.</p></dd>
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- <dt><h4><a name="label-51" id="label-51"><code>[]</code></a></h4></dt><!-- RDLabel: "[]" -->
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- <dd>
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- Same as GrADSVar#get but a subset is specified as in the method []
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- of NArray. </dd>
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- </dl>
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-
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- </body>
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- </html>