gphys 1.1.1 → 1.2.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (369) hide show
  1. data/.gitignore +17 -0
  2. data/ChangeLog +221 -0
  3. data/Gemfile +4 -0
  4. data/LICENSE.txt +18 -30
  5. data/README +23 -26
  6. data/README.md +29 -0
  7. data/Rakefile +1 -56
  8. data/bin/gpaop +2 -1
  9. data/bin/gpcut +3 -2
  10. data/bin/gpedit +6 -2
  11. data/bin/gpmath +3 -2
  12. data/bin/gpmaxmin +3 -2
  13. data/bin/gpprint +2 -1
  14. data/bin/gpvect +28 -5
  15. data/bin/gpview +43 -5
  16. data/extconf.rb +5 -6
  17. data/gphys.gemspec +34 -0
  18. data/interpo.c +63 -24
  19. data/lib/gphys.rb +2 -0
  20. data/lib/numru/dclext.rb +2636 -0
  21. data/lib/numru/derivative.rb +53 -12
  22. data/lib/numru/ganalysis/eof.rb +4 -0
  23. data/lib/numru/ganalysis/histogram.rb +73 -5
  24. data/lib/numru/ganalysis/met.rb +163 -2
  25. data/lib/numru/ganalysis/planet.rb +230 -20
  26. data/lib/numru/ggraph.rb +147 -2247
  27. data/lib/numru/gphys/assoccoords.rb +19 -3
  28. data/lib/numru/gphys/axis.rb +1 -1
  29. data/lib/numru/gphys/coordmapping.rb +2 -2
  30. data/lib/numru/gphys/derivative.rb +56 -13
  31. data/lib/numru/gphys/gphys.rb +17 -1
  32. data/lib/numru/gphys/gphys_grads_io.rb +6 -5
  33. data/lib/numru/gphys/gphys_grib_io.rb +6 -6
  34. data/lib/numru/gphys/gphys_io.rb +25 -6
  35. data/lib/numru/gphys/grads_gridded.rb +31 -29
  36. data/lib/numru/gphys/grib.rb +13 -9
  37. data/lib/numru/gphys/interpolate.rb +153 -29
  38. data/lib/numru/gphys/unumeric.rb +29 -6
  39. data/lib/numru/gphys/varray.rb +9 -0
  40. data/lib/numru/gphys/varraygrib.rb +70 -8
  41. data/lib/version.rb +3 -0
  42. metadata +247 -531
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  44. data/doc/attributenetcdf.html +0 -15
  45. data/doc/axis.html +0 -376
  46. data/doc/coordmapping.html +0 -111
  47. data/doc/coordtransform.html +0 -36
  48. data/doc/derivative/gphys-derivative.html +0 -80
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data/.gitignore ADDED
@@ -0,0 +1,17 @@
1
+ *.gem
2
+ *.rbc
3
+ .bundle
4
+ .config
5
+ .yardoc
6
+ Gemfile.lock
7
+ InstalledFiles
8
+ _yardoc
9
+ coverage
10
+ doc/
11
+ lib/bundler/man
12
+ pkg
13
+ rdoc
14
+ spec/reports
15
+ test/tmp
16
+ test/version_tmp
17
+ tmp
data/ChangeLog CHANGED
@@ -1,3 +1,224 @@
1
+ Fri Mar 2 2012 T Horinouchi
2
+ * gphys-1.2.2 released (cvs tag gphys-1_2_2)
3
+ Tue Feb 28 2012 R Mizuta
4
+ * lib/numru/gphys/unumeric.rb: not to use Date#to_datetime
5
+ + fix for "proleptic_gregorian" calendar.
6
+ Mon Feb 27 2012 T Horinouchi
7
+ * (Added Mar 2) I thought I did the following, but it has not been
8
+ released:
9
+ * gphys-1.2.2 released (cvs tag gphys-1_2_2)
10
+ * lib/numru/varraygrib.rb : changed to explicitly raise LoadError
11
+ if rb-GRIB is not available and VArrayGrib::use_rb_grib is called.
12
+ * lib/numru/ggraph.rb : altered the recently commited test :
13
+ reduced the numbder of figs; added cliping to polar stereo etc.
14
+ * lib/numru/gphys/assoccoords.rb : debug
15
+ * lib/numru/gphys/unumeric.rb: (for Ruby 1.8) not to use
16
+ Date#to_datetime if not defined.
17
+ Sun Feb 26 2012 S Otsuka
18
+ * lib/numru/dclext.rb
19
+ * bugfix in color_bar
20
+ * lib/numru/ggraph.rb
21
+ * bugfix of map_axes for itr == 10
22
+ Fri Feb 24 2012 S Otsuka
23
+ * lib/numru/dclext.rb
24
+ * bugfix in color_bar for itr >= 10
25
+ * lib/numru/ggraph.rb
26
+ * test of color_bar for itr = 13..15 and 20..23
27
+ Thu Feb 23 2012 T Horinouchi
28
+ * gphys-1.2.1 released (cvs tag gphys-1_2_1)
29
+ Tue Feb 21 2012 T Horinouchi
30
+ * install.rb: added again
31
+ Tue Feb 21 2012 T Horinouchi
32
+ * gphys-1.2.0 released (cvs tag gphys-1_2_0)
33
+ Tue Feb 21 2012 T Horinouchi
34
+ * lib/numru/gphys/grib.rb : class name changed: NumRu::Grib -->
35
+ NumRu::GPhys::Grib etc
36
+ * lib/numru/gphys/varraygrads.rb: made gphys_grib (NumRu::GPhys::Grib)
37
+ the default, supported switching between gphys_grib and rb-GRIB
38
+ (external library)
39
+ * lib/numru/gphys/gphys_io.rb, lib/numru/gphys/gphys_grib_io.rb:
40
+ Changed accordingly
41
+ Mon Feb 20 2012 T Horinouchi
42
+ * gphys_grib_io.rb, gphys_io.rb, varraygrib.rb: previous changes
43
+ are reverted
44
+ * README : updated
45
+ Mon Feb 20 2012 S Nishizawa
46
+ * gphys_grib_io.rb, gphys_io.rb, varraygrib.rb: enable to switch
47
+ grib library (default is the gphys grib).
48
+ * to switch it use GPhys::IO.use_gphys_grib or GPhys:IO.use_rb_grib
49
+ Mon Feb 20 2012 T Horinouchi
50
+ * README : added a remark on rb-GRIB
51
+ * lib/numru/ggraph.rb : added a colorbar in graph 34 & 36 (itr=5)
52
+ * lib/numru/gphys/grib.rb : not show the warning (... is obsolte).
53
+ Mon Feb 20 2012 S Otsuka
54
+ * lib/numru/dclext.rb
55
+ * bugfix in color_bar for itr = 5, 6
56
+ Sun Feb 19 2012 T Horinouchi
57
+ * install.rb: deleted (it has been obsolete since extconf.rb
58
+ was introduced years ago.)
59
+ Sun Feb 19 2012 S Takehiro
60
+ * lib/numru/gphys/gphys_io.rb parse_gturl:
61
+ * gturl format was changed so as to be able to use "/"
62
+ as a separater between path and variable.
63
+ * bin/ : comments updated according to the change of gturl format.
64
+ Sun Feb 19 2012 T Horinouchi
65
+ * README: udpated
66
+ * lib/numru/gphys/coordmapping.rb: adapted the test part to Ruby 1.9
67
+ * lib/numru/ganalysis/histogram.rb: bugfix
68
+ Fri Feb 17 2012 T Horinouchi
69
+ * lib/numru/ganalysis/met.rb: added an option to frontogenesis_func
70
+ * lib/numru/dclext.rb : updated the documentation part
71
+ * doc/ : updated
72
+ Thu Feb 16 2012 T Horinouchi
73
+ * lib/numru/dclext.rb DCLExt::flow_vect_anyproj
74
+ * improved not to show arrows on the baskside when the
75
+ projection is multi-valued (map projections)
76
+ * added handling of NaNs
77
+ * modified test part
78
+ Wed Feb 15 2012 T Horinouchi
79
+ * lib/numru/ggraph.rb (separated DCLExt into the new file dclext.rb)
80
+ * lib/numru/dclext.rb (new file) NumRu::DCLExt is separated from
81
+ lib/numru/ggraph.rb
82
+ Wed Feb 15 2012 T Horinouchi (actually done in Dec 2011)
83
+ * DCLExt::flow_vect_anyproj : added option polar_thinning etc.
84
+ Thu Feb 9 2012 S Otsuka
85
+ * lib/numru/ggraph.rb
86
+ * In GGraph, GPhys#name will be used for the title of a diagram
87
+ if GPhys#long_name is too long.
88
+ * tentative workaround in GGraph#color_bar
89
+ * lib/numru/ganalysis/eof.rb
90
+ * Load rubygems because Ruby/GSL might be installed via rubygems.
91
+ Thu Feb 9 2012 R Mizuta
92
+ * lib/numru/gphys/unumeric.rb
93
+ * bugfix in the method self::from_date with "360_day" calendar.
94
+ Fri Feb 3 2012 S Otsuka
95
+ * lib/numru/ggraph.rb
96
+ * Map projection numbers 16--19 and 34 are enabled.
97
+ Additional modifications might be needed in future.
98
+ (DCL 5.4.3 or later is needed to actually use these.)
99
+ Fri Feb 3 2012 R Mizuta
100
+ * lib/numru/gphys/grads_gridded.rb, gphys_grads_io.rb:
101
+ * fixed an error when variable names in grads ctl files
102
+ conflict with dimension names (x,y,z,t).
103
+ Wed Feb 1 2012 S Takehiro < S. Nishizawa
104
+ * bin/gpview
105
+ * added --tonf option.
106
+ * bin/gpvect
107
+ * added --tonf option.
108
+ Tue Jan 31 2012 R Mizuta
109
+ * lib/numru/gphys/unumeric.rb
110
+ * added support for "proleptic_gregorian" calendar.
111
+ * added check for invalid date in "360_day" calendar.
112
+ Tue Jan 24 2012 T Horinouchi
113
+ * commited some enhancement/modification made in Dec 2011
114
+ * lib/numru/ganalysis/planet.rb
115
+ * supported boundary condition selection for derivatives (lat_bc)
116
+ * added some methods (grad_sx, grad_sy, grad_sy_cosphifact,
117
+ weight_tanphi, weight_cosphi, weight_sinphi)
118
+ * lib/numru/ganalysis/met.rb
119
+ * added a method df_dx_vialogscale, to support numerical
120
+ derivative in log-p coordinate. This is not necessarily
121
+ an improvement --- it depends on inputs, but the default
122
+ is tentatively changed to use it.
123
+ * added new methods: z2geostrophic_wind, frontogenesis_func
124
+ Sun Jan 8 2012 S Otsuka
125
+ * lib/numru/ggraph.rb:
126
+ * default value of LGLOBE in map projections are changed.
127
+ * when Mercator, LGLOBE becomes true only if the window is
128
+ almost global.
129
+ * bugfix in DCLExt#color_bar: when map projection is used
130
+ in the main plot, ITR was reset when DCLExt.color_bar was called.
131
+ Wed Jan 4 2012 S Otsuka
132
+ * lib/numru/gphys/varray.rb: marshal dump and load are implemented.
133
+ Thu Dec 24 2011 S Otsuka
134
+ * lib/numru/ganalysis/histogram.rb: bugfix for logarithmic axes.
135
+ Thu Dec 22 2011 S Otsuka
136
+ * lib/numru/ggraph.rb: log10_safe and log10_or_0 are defined
137
+ in order to prevent errors when 0 is given to Math::log10.
138
+ Math::log10 in color_bar-related functions are substituted
139
+ with log10_or_0.
140
+ * lib/numru/ganalysis/histogram.rb: bugfix of default window.
141
+ Wed Dec 14 2011 T Horinouchi
142
+ * lib/numru/ggraph.rb: Supported vector drawing in any projection
143
+ (esp. map projection!). It requires a new (yet to come) version
144
+ of NArrayMiss -- it depends on NArrayMiss#valid? with argument(s).
145
+ * New methods:
146
+ * DCLExt::flow_vect_anyproj : flow_vect on any DCL projection.
147
+ Arrows drawn by this method are properly directed locally
148
+ (consistent with the local coordinate). Their lengths are
149
+ proportional to those of the data given. (currently not yet
150
+ tested with the tranformations 5 and 6, which I'm not used to).
151
+ * DCLExt::unit_vect_single : for DCLExt::flow_vect_anyproj.
152
+ Draws only one arrow to express the scaling (by default,
153
+ upward oriented.)
154
+ * Default change:
155
+ * GGraph::vector : changed to use flow_vect_anyproj if
156
+ the current projection number is >= 2. (the method to use
157
+ can be switched by the new option "flow_vect_anyproj")
158
+
159
+ Mon Dec 12 2011 T Horinouchi
160
+ * lib/numru/interpolate.rb: debug of mouse_cut: up to the previous
161
+ version, the end point of the last line segment is not included
162
+ in the sample points. (So the debug is to cover this end point.)
163
+ * lib/numru/interpolate.rb: debug of coord_data_reverse :
164
+ to avoid a side effect on the grid of self.
165
+ * lib/numru/interpolate.rb: Added a new method dcl_fig_cut,
166
+ which is separated from mouse_cut for use cases without
167
+ mouse click.
168
+ Fri Dec 9 2011 S Otsuka
169
+ * lib/numru/ggraph.rb: xreverse and yreverse will be true
170
+ when the unit of an axis is compatible with that specified
171
+ as an option (previously xreverse/yreverse became true
172
+ only when the unit was exactly the same).
173
+ Fri Dec 2 2011 T Horinouchi
174
+ * lib/numru/gphys/gphys.rb: added a new method shape_coerce_full
175
+ (similar to shape_coerce but possibly expands by replication)
176
+ * lib/numru/interpolate.rb: added a new method coord_data_reverse
177
+ (reverses the main data (i.e., the dependent variable) and one of the
178
+ coordinates (an independent variable) through interpolation.)
179
+ Thu Dec 1 2011 T Horinouchi
180
+ * lib/numru/interpolate.rb, interpo.c: Supported a behavior
181
+ not to make extrapolation outside the original grid.
182
+ Changed the default behavior to this one.
183
+ * lib/numru/interpolate.rb: added a new class method
184
+ GPhys::extrapolation=(extrapo), where extrapo is true or
185
+ false --- the default behavior is false, as noted above.
186
+ Tue Nov 29 2011 S Nishizawa
187
+ * lib/numru/grib.rb: print message to inform that this grib library is obsoluted.
188
+ * lib/numru/varraygrib: change to find rb-grib library first.
189
+ Sun Nov 20 2011 S Takehiro
190
+ * bin/gpview: option --eddy implemented.
191
+ * bin/gpvect: option --eddy implemented.
192
+ Fri Nov 11 2011 T Horinouchi
193
+ * lib/numru/ggraph.rb: added 'xloglabelall' and
194
+ 'yloglabelall' to the options of GGraph::axes (to show
195
+ lavels for all log-level tick marks)
196
+ Thu Nov 03 2011 S Takehiro
197
+ * bin/gpview: option --time_ax implemented.
198
+ Fri Oct 28 2011 S Otsuka
199
+ * lib/numru/ganalysis/histogram.rb:
200
+ * support for itr=2, 3, and 4 in GGraph#histogram.
201
+ Tue Oct 18 2011 T Horinouchi
202
+ * lib/numru/ganalysis/planet.rb :
203
+ * Changed method name: get_lonlat --> get_lambda_phi.
204
+ * method get_lambda_phi: added an optional argument
205
+ err_raise (default:true). Changed the order of outputs.
206
+ Added doc.
207
+ * lib/numru/interpolate.rb: minor reformating of documentation
208
+ * lib/numru/gphys/axis.rb: Axis#cyclic_extendible?: debug
209
+ Mon Oct 17 2011 T Horinouchi
210
+ * lib/numru/ganalysis/planet.rb : find_lon_lat_dims: Refined the
211
+ criteria
212
+ Fri Oct 14 2011 T Horinouchi
213
+ * lib/numru/gphys/derivative.rb: added a new method deriv2nd
214
+ * lib/numru/derivative.rb: added a new method deriv2nd
215
+ (2nd derivative covering uniform grids)
216
+ Sun Sep 04 2011 S Otsuka
217
+ * When max and min of an axis are the same integer value,
218
+ window values become invalid.
219
+ Thu Aug 18 2011 T Horinouchi
220
+ * lib/numru/interpolate.rb: mouse_cut: added optional arguments
221
+ line_type & line_index, whose default values are 1 & 1,respectively.
1
222
  Mon Aug 15 2011 T Horinouchi
2
223
  * gphys-1.1.1 released (cvs tag gphys-1_1_1)
3
224
  Thu Aug 11 2011 T Horinouchi
data/Gemfile ADDED
@@ -0,0 +1,4 @@
1
+ source 'https://rubygems.org'
2
+
3
+ # Specify your gem's dependencies in gphys.gemspec
4
+ gemspec
data/LICENSE.txt CHANGED
@@ -1,34 +1,22 @@
1
- GPhys is copyrighted free software by Takeshi Horinouchi and
2
- GFD Dennou Club (http://www.gfd-dennou.org/).
1
+ Copyright (c) 2012 Eriko Nishimoto
3
2
 
4
- Copyright 2011 (C) Takeshi Horinouchi and GFD Dennou Club
5
- (http://www.gfd-dennou.org/) All rights reserved.
3
+ MIT License
6
4
 
7
- Redistribution and use in source and binary forms, with or without
8
- modification, are permitted provided that the following conditions are
9
- met:
5
+ Permission is hereby granted, free of charge, to any person obtaining
6
+ a copy of this software and associated documentation files (the
7
+ "Software"), to deal in the Software without restriction, including
8
+ without limitation the rights to use, copy, modify, merge, publish,
9
+ distribute, sublicense, and/or sell copies of the Software, and to
10
+ permit persons to whom the Software is furnished to do so, subject to
11
+ the following conditions:
10
12
 
11
- 1. Redistributions of source code must retain the above copyright
12
- notice, this list of conditions and the following disclaimer.
13
+ The above copyright notice and this permission notice shall be
14
+ included in all copies or substantial portions of the Software.
13
15
 
14
- 2. Redistributions in binary form must reproduce the above copyright
15
- notice, this list of conditions and the following disclaimer in
16
- the documentation and/or other materials provided with the
17
- distribution.
18
-
19
- THIS SOFTWARE IS PROVIDED BY GFD DENNOU CLUB AND CONTRIBUTORS ``AS IS''
20
- AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
21
- THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
22
- PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GFD DENNOU CLUB OR
23
- CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
24
- EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
25
- PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
26
- PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
27
- LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
28
- NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
29
- SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
30
-
31
- The views and conclusions contained in the software and documentation
32
- are those of the authors and should not be interpreted as representing
33
- official policies, either expressed or implied, of Takeshi Horinouchi
34
- and GFD Dennou Club.
16
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
17
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
18
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
19
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
20
+ LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
21
+ OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
22
+ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
data/README CHANGED
@@ -1,33 +1,30 @@
1
+ = GPhys -- a class of multi-dimensional Gridded Physical quantities
1
2
 
2
- GPhys -- a class of multi-dimensional Gridded Physical quantities
3
+ == Description and general information
4
+ See http://ruby.gfd-dennou.org/products/gphys/
3
5
 
4
- by T Horinouchi
5
- 2003/05/14
6
+ == Licence
7
+ See LICENSE.txt
6
8
 
7
- * DESCRIPTION
9
+ == Dependent libraries
8
10
 
9
- To be written.
10
- See http://ruby.gfd-dennou.org/workshop200303/horinout/ (in Japanese).
11
+ As of GPhys 1.2.0.
11
12
 
12
- * INSTALL
13
+ Dependent libraries and their versions (required or recommended):
14
+ * Ruby 1.8 or 1.9
15
+ * NArray: 0.5.7 or later
16
+ * NumRu::Misc : 0.1.0 or later
17
+ * NumRu::Units : 1.7 or later
18
+ * NArrayMiss : 1.2.4 or later
19
+ * RubyNetCDF : 0.6.6 or later
20
+ * RubyDCL : 1.6.1 or later
21
+ * Ruby-FFTW3 : 0.3 or later
22
+ * RubyGSL : 1.14 or later
13
23
 
14
- # ruby extconf.rb && make && make install
15
- # ruby ./install.rb
24
+ Recommended libraries:
25
+ * Ruby-LAPACK : 1.5 or later (used for efficiency if installed)
16
26
 
17
- * SAMPLE PROGRAMS
18
-
19
- Each library file has a sample program part, which is invoked by
20
- directly feeding the file to Ruby. For example
21
-
22
- % cd lib/numru/
23
- % ruby ggraph.rb
24
-
25
- % cd lib/numru/gphys
26
- % ruby gphys.rb
27
- % ruby gphys_netcdf_io.rb
28
-
29
- Sample programs are also found in the
30
-
31
- ./sample
32
-
33
- diredtory.
27
+ Optional dependent libraries:
28
+ * rb-GRIB : 0.2.0 or later (used if installed and explicitly specified.
29
+ Needed to read GRIB2 data. But rb-GRIB 0.2.0 is experimental, so it
30
+ is not recommended. Wait for a future version.)
data/README.md ADDED
@@ -0,0 +1,29 @@
1
+ # Gphys
2
+
3
+ TODO: Write a gem description
4
+
5
+ ## Installation
6
+
7
+ Add this line to your application's Gemfile:
8
+
9
+ gem 'gphys'
10
+
11
+ And then execute:
12
+
13
+ $ bundle
14
+
15
+ Or install it yourself as:
16
+
17
+ $ gem install gphys
18
+
19
+ ## Usage
20
+
21
+ TODO: Write usage instructions here
22
+
23
+ ## Contributing
24
+
25
+ 1. Fork it
26
+ 2. Create your feature branch (`git checkout -b my-new-feature`)
27
+ 3. Commit your changes (`git commit -am 'Add some feature'`)
28
+ 4. Push to the branch (`git push origin my-new-feature`)
29
+ 5. Create new Pull Request
data/Rakefile CHANGED
@@ -1,56 +1 @@
1
- require 'rake/gempackagetask'
2
-
3
- NAME = 'gphys'
4
- VER = '1.1.1'
5
-
6
- PKG_FILES = FileList[
7
- '**',
8
- 'bin/**/*',
9
- 'doc/**/*',
10
- 'lib/**/*',
11
- 'sample/**/*',
12
- 'test/**/*',
13
- 'testdata/**/*'
14
- ]
15
-
16
- spec = Gem::Specification.new do |s|
17
- s.name = NAME
18
- s.version = VER
19
- s.authors = ["Takeshi Horinouchi", "Ryo Mizuta",\
20
- "Daisuke Tsukahara", "Seiya Nishizawa", "Shin-ichi Takehiro"]
21
- s.email = ['eriko@gfd-dennou.org']
22
- s.homepage = 'http://www.gfd-dennou.org/arch/ruby/products/gphys/'
23
- s.licenses = ["GFD Dennou Club"]
24
- s.platform = Gem::Platform::RUBY
25
- s.summary = %q{a multi-purpose class to handle Gridded Physical quantities}
26
- s.description = %q{comprehensive library for self-descriptive gridded physical data (in NetCDF, GrADS, or on memory) with graphicsgraphicsgraphicsgraphics.}
27
-
28
- s.files = PKG_FILES.to_a
29
- s.require_paths = ['lib']
30
- s.test_files = Dir.glob("test/*")
31
- s.bindir = 'bin'
32
- s.executables = ['gdir_client','gpaop','gpcut','gplist'\
33
- ,'gpmaxmin','gpvect','grads2nc_with_gphys','gdir_server'\
34
- ,'gpcat','gpedit','gpmath','gpprint','gpview']
35
-
36
- s.has_rdoc = false
37
- #s.extra_rdoc_files = ['README']
38
-
39
- s.required_ruby_version = Gem::Requirement.new(">= 1.6")
40
-
41
- s.add_runtime_dependency(%q<narray>, [">= 0"])
42
- s.add_runtime_dependency(%q<numru-misc>, [">= 0.0.4"])
43
- s.add_runtime_dependency(%q<numru-units>, [">= 1.5"])
44
- s.add_runtime_dependency(%q<narray_miss>, [">= 0"])
45
- s.add_runtime_dependency(%q<ruby-netcdf>, [">= 0.5.2"])
46
- s.add_runtime_dependency(%q<ruby-dcl>, [">= 1.2.1"])
47
- s.add_runtime_dependency(%q<fftw3>, [">= 0.2"])
48
-
49
- s.extensions << "extconf.rb"
50
- end
51
-
52
- Rake::GemPackageTask.new(spec) do |pkg|
53
- pkg.gem_spec = spec
54
- pkg.need_tar = true
55
- end
56
-
1
+ require "bundler/gem_tasks"
data/bin/gpaop CHANGED
@@ -20,7 +20,7 @@ by the following command formats.
20
20
 
21
21
  % gpaop -f func [options] gturl1 gturl2 ...
22
22
 
23
- Format of 'gturl*' is 'path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]'
23
+ Format of 'gturl*' is 'path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]'
24
24
 
25
25
  % gpaop -f func --var varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]] [options] gtfile1 gtfile2 ...
26
26
 
@@ -55,6 +55,7 @@ Usage Examples
55
55
  2005/08/21 S Takehiro (created)
56
56
  2005/08/23 S Takehiro (common methods to gp* commandmoved to gpcommon.rb)
57
57
  2010/03/10 Y SASAKI (change help block into RD format)
58
+ 2012/02/19 S Takehiro (description for gturl format updated)
58
59
 
59
60
  =end
60
61
 
data/bin/gpcut CHANGED
@@ -10,7 +10,7 @@ gpcut - Extract, slicing and thinning a GPhys variable.
10
10
 
11
11
  = USAGE
12
12
 
13
- % gpcut [options] path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
13
+ % gpcut [options] path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
14
14
 
15
15
  = OPTIONS
16
16
 
@@ -30,6 +30,7 @@ gpcut - Extract, slicing and thinning a GPhys variable.
30
30
  2005/08/21 S Takehiro (global attributes copied to the output file)
31
31
  2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
32
32
  2010/03/10 Y SASAKI (change help block into RD format)
33
+ 2012/02/19 S Takehiro (description for gturl format updated)
33
34
 
34
35
  =end
35
36
 
@@ -41,7 +42,7 @@ require "getoptlong"
41
42
 
42
43
  #------------------------ Default Settings ------------------------
43
44
  Output_default = 'gphys.nc'
44
- URLfmt = "path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]"
45
+ URLfmt = "path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]"
45
46
 
46
47
  #---------------------- Option Configuration ----------------------
47
48
  parser = GetoptLong.new(
data/bin/gpedit CHANGED
@@ -8,7 +8,7 @@
8
8
 
9
9
  = USAGE
10
10
 
11
- % gpedit [options] path@[varname:var_attr=...][varname|+global_attr]
11
+ % gpedit [options] path[@|/][varname:var_attr=...][varname|+global_attr]
12
12
 
13
13
  = EXAMPLES
14
14
 
@@ -23,6 +23,7 @@
23
23
  "
24
24
  = HISTORY
25
25
 
26
+ 2012/02/19 S Takehiro (gturl format updated)
26
27
  2010/03/10 Y SASAKI (change help block into RD format)
27
28
  2007/07/18 Y. Morikawa 'gpattr' is renamed to 'gpedit'
28
29
  2006/09/29 Y. Morikawa A value looks like numeric is treated as a numerical value
@@ -142,8 +143,11 @@ def parse_gturl_for_attr(gturl)
142
143
  if /(.*)@(.*)/ =~ gturl
143
144
  file = $1
144
145
  var = $2
146
+ elsif /(.*)\/(.*)/ =~ gturl
147
+ file = $1
148
+ var = $2
145
149
  else
146
- url_error "'@' between path & variable is not found"
150
+ url_error "'[@|/]' between path & variable is not found"
147
151
  end
148
152
  if /(.*):(.*)/ =~ var
149
153
  var_name = var.split(":")[0]
data/bin/gpmath CHANGED
@@ -6,7 +6,7 @@ gpmath - operating a mathematical function to a GPhys variable.
6
6
 
7
7
  = USAGE
8
8
 
9
- % gpmath [options] path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
9
+ % gpmath [options] path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
10
10
 
11
11
  = OPTIONS
12
12
 
@@ -33,6 +33,7 @@ gpmath - operating a mathematical function to a GPhys variable.
33
33
  2005/08/21 S Takehiro (global attributes copied to the output file)
34
34
  2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
35
35
  2010/03/10 Y SASAKI (change help block into RD format)
36
+ 2012/02/19 S Takehiro (description for gturl format updated)
36
37
 
37
38
  =end
38
39
 
@@ -44,7 +45,7 @@ require "getoptlong"
44
45
 
45
46
  #------------------------ Default Settings ------------------------
46
47
  Output_default = 'gphys.nc'
47
- URLfmt = "path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]"
48
+ URLfmt = "path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]"
48
49
 
49
50
  #---------------------- Option Configuration ----------------------
50
51
  parser = GetoptLong.new(
data/bin/gpmaxmin CHANGED
@@ -6,7 +6,7 @@ gpmaxmin - printing maximum and minimum values of a GPhys variable.
6
6
 
7
7
  = USAGE
8
8
 
9
- % gpmaxmin [options] path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
9
+ % gpmaxmin [options] path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
10
10
 
11
11
  = OPTIONS
12
12
 
@@ -26,6 +26,7 @@ gpmaxmin - printing maximum and minimum values of a GPhys variable.
26
26
  2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
27
27
  2006/03/07 M Nakano (USAGE Typo fixed)
28
28
  2010/03/10 Y SASAKI (change help block into RD format)
29
+ 2012/02/19 S Takehiro (description for gturl format updated)
29
30
 
30
31
  =end
31
32
 
@@ -36,7 +37,7 @@ include NumRu
36
37
  require "getoptlong"
37
38
 
38
39
  #------------------------ Default Settings ------------------------
39
- URLfmt = "path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]"
40
+ URLfmt = "path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]"
40
41
  print_maxdefault=5
41
42
 
42
43
  #---------------------- Option Configuration ----------------------
data/bin/gpprint CHANGED
@@ -18,7 +18,7 @@ texts with line feeding to avoid long lines and are made to stdout.
18
18
 
19
19
  where the format of the url is
20
20
 
21
- path@varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
21
+ path[@|/]varname[,dimname=pos1[:pos2[:thinning_intv]][,dimname=...]]
22
22
 
23
23
  = EXAMPLES
24
24
 
@@ -35,6 +35,7 @@ where the format of the url is
35
35
  2005/08/10 S Takehiro (utilize internal function for printing help message)
36
36
  2005/08/23 S Takehiro (common methods to gp* command moved to gpcommon.rb)
37
37
  2010/03/10 Y SASAKI (change help block into RD format)
38
+ 2012/02/19 S Takehiro (description for gturl format updated)
38
39
 
39
40
  =end
40
41
  ##################################################