gphys 1.1.1 → 1.2.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (369) hide show
  1. data/.gitignore +17 -0
  2. data/ChangeLog +221 -0
  3. data/Gemfile +4 -0
  4. data/LICENSE.txt +18 -30
  5. data/README +23 -26
  6. data/README.md +29 -0
  7. data/Rakefile +1 -56
  8. data/bin/gpaop +2 -1
  9. data/bin/gpcut +3 -2
  10. data/bin/gpedit +6 -2
  11. data/bin/gpmath +3 -2
  12. data/bin/gpmaxmin +3 -2
  13. data/bin/gpprint +2 -1
  14. data/bin/gpvect +28 -5
  15. data/bin/gpview +43 -5
  16. data/extconf.rb +5 -6
  17. data/gphys.gemspec +34 -0
  18. data/interpo.c +63 -24
  19. data/lib/gphys.rb +2 -0
  20. data/lib/numru/dclext.rb +2636 -0
  21. data/lib/numru/derivative.rb +53 -12
  22. data/lib/numru/ganalysis/eof.rb +4 -0
  23. data/lib/numru/ganalysis/histogram.rb +73 -5
  24. data/lib/numru/ganalysis/met.rb +163 -2
  25. data/lib/numru/ganalysis/planet.rb +230 -20
  26. data/lib/numru/ggraph.rb +147 -2247
  27. data/lib/numru/gphys/assoccoords.rb +19 -3
  28. data/lib/numru/gphys/axis.rb +1 -1
  29. data/lib/numru/gphys/coordmapping.rb +2 -2
  30. data/lib/numru/gphys/derivative.rb +56 -13
  31. data/lib/numru/gphys/gphys.rb +17 -1
  32. data/lib/numru/gphys/gphys_grads_io.rb +6 -5
  33. data/lib/numru/gphys/gphys_grib_io.rb +6 -6
  34. data/lib/numru/gphys/gphys_io.rb +25 -6
  35. data/lib/numru/gphys/grads_gridded.rb +31 -29
  36. data/lib/numru/gphys/grib.rb +13 -9
  37. data/lib/numru/gphys/interpolate.rb +153 -29
  38. data/lib/numru/gphys/unumeric.rb +29 -6
  39. data/lib/numru/gphys/varray.rb +9 -0
  40. data/lib/numru/gphys/varraygrib.rb +70 -8
  41. data/lib/version.rb +3 -0
  42. metadata +247 -531
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  44. data/doc/attributenetcdf.html +0 -15
  45. data/doc/axis.html +0 -376
  46. data/doc/coordmapping.html +0 -111
  47. data/doc/coordtransform.html +0 -36
  48. data/doc/derivative/gphys-derivative.html +0 -80
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- <html xmlns="http://www.w3.org/1999/xhtml">
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- <head>
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- <title>../../lib/numru/gphys/ep_flux.rb</title>
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- </head>
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- <body>
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- <h1><a name="label:0" id="label:0">module NumRu::GPhys::EP_Flux in ep_flux.</a></h1><!-- RDLabel: "module NumRu::GPhys::EP_Flux in ep_flux." -->
11
- <h2><a name="label:1" id="label:1">Testprogram</a></h2><!-- RDLabel: "Testprogram" -->
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- <p>Test script path is 'test/test_ep_flux.rb' in expand dir of gphys.tar.gz.</p>
13
- <h2><a name="label:2" id="label:2">Index</a></h2><!-- RDLabel: "Index" -->
14
- <ul>
15
- <li><a href="#label:3">module NumRu::GPhys::EP_Flux</a>
16
- <ul>
17
- <li><a href="#label:4">Functions:</a>
18
- <ul>
19
- <li><a href="#label:5">ep_full_sphere</a>
20
- <ul>
21
- <li>calculate EP Flux with full set equations on spherical coordinate.</li>
22
- </ul></li>
23
- <li><a href="#label:6">div_sphere</a>
24
- <ul>
25
- <li>calculate divergence on spherical coordinate, Not only for EP Flux!</li>
26
- </ul></li>
27
- <li><a href="#label:34">strm_rmean</a>
28
- <ul>
29
- <li>calculate residual mass stream function in spherical coordinate
30
- (it might be good precision, but enough test has not done yet.)</li>
31
- </ul></li>
32
- <li><a href="#label:9">scale_height</a>
33
- <ul>
34
- <li>get the scale height.</li>
35
- </ul></li>
36
- <li><a href="#label:10">scale_height=</a>
37
- <ul>
38
- <li>set the scale height.</li>
39
- </ul></li>
40
- <li><a href="#label:11">radius</a>
41
- <ul>
42
- <li>get the radus of planet.</li>
43
- </ul></li>
44
- <li><a href="#label:12">radius=</a>
45
- <ul>
46
- <li>set the radus of planet.</li>
47
- </ul></li>
48
- <li><a href="#label:13">rot_period</a>
49
- <ul>
50
- <li>get the rotation period of planet.</li>
51
- </ul></li>
52
- <li><a href="#label:14">rot_period=</a>
53
- <ul>
54
- <li>set the rotation period of planet.</li>
55
- </ul></li>
56
- <li><a href="#label:15">g_forces</a>
57
- <ul>
58
- <li>get the gravitational acceleration in surface.</li>
59
- </ul></li>
60
- <li><a href="#label:16">g_forces=</a>
61
- <ul>
62
- <li>set the gravitational acceleration in surface.</li>
63
- </ul></li>
64
- <li><a href="#label:17">p00</a>
65
- <ul>
66
- <li>get the reference surface pressure.</li>
67
- </ul></li>
68
- <li><a href="#label:18">p00=</a>
69
- <ul>
70
- <li>set the reference surface pressure.</li>
71
- </ul></li>
72
- <li><a href="#label:19">cp</a>
73
- <ul>
74
- <li>get the the specific heat at constant pressure of the atmosphere.</li>
75
- </ul></li>
76
- <li><a href="#label:20">cp=</a>
77
- <ul>
78
- <li>set the the specific heat at constant pressure of the atmosphere.</li>
79
- </ul></li>
80
- <li><a href="#label:21">gas_const</a>
81
- <ul>
82
- <li>get the specific heat at constant pressure of the atmosphere.</li>
83
- </ul></li>
84
- <li><a href="#label:22">gas_const=</a>
85
- <ul>
86
- <li>set the specific heat at constant pressure of the atmosphere.</li>
87
- </ul></li>
88
- <li><a href="#label:23">get_constants</a>
89
- <ul>
90
- <li>get the module variables</li>
91
- </ul></li>
92
- <li><a href="#label:24">set_constants</a>
93
- <ul>
94
- <li>set the module variables</li>
95
- </ul></li>
96
- <li><a href="#label:25">make_gphys</a>
97
- <ul>
98
- <li>convert <!-- Reference, RDLabel "Axis" doesn't exist --><em class="label-not-found">Axis</em><!-- Reference end --> to <!-- Reference, RDLabel "GPhys" doesn't exist --><em class="label-not-found">GPhys</em><!-- Reference end -->.</li>
99
- </ul></li>
100
- <li><a href="#label:26">to_w_if_omega</a>
101
- <ul>
102
- <li>convert to velocity if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is pressure velocity.</li>
103
- </ul></li>
104
- <li><a href="#label:27">to_z_if_pressure</a>
105
- <ul>
106
- <li>convert to altitude if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is pressure.</li>
107
- </ul></li>
108
- <li><a href="#label:28">to_p_if_altitude</a>
109
- <ul>
110
- <li>convert to pressure if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is altitude.</li>
111
- </ul></li>
112
- <li><a href="#label:29">to_theta_if_temperature</a>
113
- <ul>
114
- <li>convert to potential temperature of temperature if <!-- Reference, RDLabel "flag" doesn't exist --><em class="label-not-found">flag</em><!-- Reference end --> is true.</li>
115
- </ul></li>
116
- <li><a href="#label:30">to_rad_if_deg</a>
117
- <ul>
118
- <li>convert to radian if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is degrees.</li>
119
- </ul></li>
120
- <li><a href="#label:31">eddy_products</a>
121
- <ul>
122
- <li>calculate eddy flux respect to <!-- Reference, RDLabel "dimname" doesn't exist --><em class="label-not-found">dimname</em><!-- Reference end -->.</li>
123
- </ul></li>
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- <li><a href="#label:32">remove_0_at_poles</a>
125
- <ul>
126
- <li>set value if the cos(phi) is 0 at poles (phi is latitude).</li>
127
- </ul></li>
128
- <li><a href="#label:33">preparate_for_vector_on_merdional_section</a>
129
- <ul>
130
- <li>preparate for <!-- Reference, RDLabel "GGraph::vector_on_merdional_section" doesn't exist --><em class="label-not-found">GGraph::vector_on_merdional_section</em><!-- Reference end -->
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- in vector_on_merdional_section.rb</li>
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- </ul></li>
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- </ul></li>
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- <li><a href="#label:35">Constants:</a>
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- <ul>
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- <li><a href="#label:36">Deriv_methods</a>
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- <ul>
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- <li>derivative method names.</li>
139
- </ul></li>
140
- </ul></li>
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- </ul></li>
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- </ul>
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- <h1><a name="label:3" id="label:3">module NumRu::GPhys::EP_Flux</a></h1><!-- RDLabel: "module NumRu::GPhys::EP_Flux" -->
144
- <p>Module functions of EP_Flux Operater for GPhys.</p>
145
- <h2><a name="label:4" id="label:4">Functions:</a></h2><!-- RDLabel: "Functions:" -->
146
- <dl>
147
- <dt><a name="label:5" id="label:5"><code>ep_full_sphere(<var>gp_u</var>, <var>gp_v</var>, <var>gp_w_or_omega</var>, <var>gp_temp_or_theta</var>, <var>flag_temp_or_theta</var>, <var>xyzdims</var>=[<var>0</var>,<var>1</var>,<var>2</var>])</code></a></dt><!-- RDLabel: "ep_full_sphere" -->
148
- <dd>
149
- <p>Calculate Eliassen-Palm Flux(EP-Flux) from full set equations on the
150
- spherical coordinate. this method calculates EP-Flux from 4 GPhys objects,
151
- zonal-wind velocity(U), merdional-wind velocity(V), vertical-wind velocity(W)
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- or pressure velocity(Omega), and temperature(T) or potential(Theta)
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- temperature. check the equations on documents. </p>
154
- <p>Furthermore, Residual mean merdional circulation (0, v*, w*) can be calculated.</p>
155
- <p>ARGUMENTS</p>
156
- <ul>
157
- <li>gp_u (GPhys): a GPhys which data is U.</li>
158
- <li>gp_v (GPhys): a GPhys which data is V.</li>
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- <li>gp_w_or_omega (GPhys): a GPhys which data is W or Omega. if you give
160
- gp_omega, convert to W in this method and calculate EP-Flux.</li>
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- <li>gp_temp_or_theta (GPhys): a GPhys which data is T or Theta.</li>
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- <li><p>xyzdims (Array): an Array which represents location of upper gphyses's </p>
163
- <pre>coordinate. if coordinate configuration is
164
- (longitude, latitude, z), then xyzdims = [0, 1, 2].
165
- else if coordinate configuration is
166
- (z, latitude, longitude), then xyzdims = [2, 1, 0].</pre></li>
167
- </ul>
168
- <p>RETURN VALUE</p>
169
- <ul>
170
- <li>epflx_y (GPhys): EP-Flux y-component. it is on the merdional hoge.</li>
171
- <li>epflx_z (GPhys): EP-Flux z-component.</li>
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- <li>v_rmean (GPhys): residual zonal mean V.</li>
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- <li>w_rmean (GPhys): residual zonal mean W.</li>
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- <li>gp_lat (GPhys): latitude (its units is radian)</li>
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- <li>gp_z (GPhys): from vertical axis (z)</li>
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- <li>u_mean (GPhys): zonal-mean U.</li>
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- <li>theta_mean (GPhys): zonal-mean Theta.</li>
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- <li>uv_dash (GPhys): zonal mean of zonal-eddy products U and V.</li>
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- <li>vt_dash (GPhys): zonal mean of zonal-eddy products V and Theta.</li>
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- <li>uw_dash (GPhys): zonal mean of zonal-eddy products U and W.</li>
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- <li>dtheta_dz (GPhys): zonal mean Theta derivate with z.</li>
182
- </ul></dd>
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- <dt><a name="label:6" id="label:6"><code>div_sphere(<var>gp_y</var>, <var>gp_z</var>)</code></a></dt><!-- RDLabel: "div_sphere" -->
184
- <dd>
185
- <p>Calculate divergence on the spherical coordinate. it is exclusive to in
186
- merdional cross section.</p>
187
- <p>ARGUMENTS</p>
188
- <ul>
189
- <li><p>gp_y (GPhys): a GPhys which is merdional component you want to calculate</p>
190
- <pre>divergence.</pre></li>
191
- <li><p>gp_z (GPhys): a GPhys which is vertical component you want to calculate </p>
192
- <pre>divergence.</pre></li>
193
- </ul>
194
- <p>RETURN VALUE</p>
195
- <ul>
196
- <li>gp_div (GPhys): a GPhys which is divergence on the spherical coordinate.</li>
197
- </ul></dd>
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- <dt><a name="label:7" id="label:7"><code>set_deriv_method( <var>method_name</var> )</code></a></dt><!-- RDLabel: "set_deriv_method" -->
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- <dd>
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- <p>Set derivative method. methods are defined in <!-- Reference, RDLabel "GPhys::derivative" doesn't exist --><em class="label-not-found">GPhys::derivative</em><!-- Reference end -->.
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- Now <!-- Reference, RDLabel "cderiv" doesn't exist --><em class="label-not-found">cderiv</em><!-- Reference end --> and <!-- Reference, RDLabel "threepoint_O2nd_deriv" doesn't exist --><em class="label-not-found">threepoint_O2nd_deriv</em><!-- Reference end --> supported</p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>method_name (String): derivative method name.</li>
205
- </ul>
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- <p>RETURN VALUE</p>
207
- <ul>
208
- <li>nil</li>
209
- </ul></dd>
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- <dt><a name="label:8" id="label:8"><code>deriv( *<var>args</var> )</code></a></dt><!-- RDLabel: "deriv" -->
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- <dd>
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- <p>Call derivative method defined in <!-- Reference, RDLabel "GPhys::Derivative" doesn't exist --><em class="label-not-found">GPhys::Derivative</em><!-- Reference end --> refer to
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- <!-- Reference, RDLabel "@@deriv_method" doesn't exist --><em class="label-not-found">@@deriv_method</em><!-- Reference end -->. </p>
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- <p>ARGUMENTS</p>
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- <ul>
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- <li>args : Option for derivative method. Pleaase see <!-- Reference, RDLabel "GPhys::Derivative" doesn't exist --><em class="label-not-found">GPhys::Derivative</em><!-- Reference end -->.</li>
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- </ul>
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- <p>RETURN VALUE</p>
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- <ul>
220
- <li>nil</li>
221
- </ul></dd>
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- <dt><a name="label:9" id="label:9"><code>scale_height</code></a></dt><!-- RDLabel: "scale_height" -->
223
- <dd>
224
- <p>return a value of the scale height on the log-pressure coordinate.
225
- default value is "7000 m".</p>
226
- <pre>RETURN VALUE
227
- * scale height (UNumeric)</pre></dd>
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- <dt><a name="label:10" id="label:10"><code>scale_height=(<var>h</var>)</code></a></dt><!-- RDLabel: "scale_height=" -->
229
- <dd>
230
- <p>set a value of the scale height on the log-pressure coordinate.</p>
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- <pre>RETURN VALUE
232
- * nil</pre></dd>
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- <dt><a name="label:11" id="label:11"><code>radius</code></a></dt><!-- RDLabel: "radius" -->
234
- <dd>
235
- <p>return a value of the radius of the planet. default value is "6.37E6 m".</p>
236
- <pre>RETURN VALUE
237
- * radius (UNumeric)</pre></dd>
238
- <dt><a name="label:12" id="label:12"><code>radius=(<var>a</var>)</code></a></dt><!-- RDLabel: "radius=" -->
239
- <dd>
240
- <p>set a value of the radius of the planet.</p>
241
- <pre>RETURN VALUE
242
- * nil</pre></dd>
243
- <dt><a name="label:13" id="label:13"><code>rot_period</code></a></dt><!-- RDLabel: "rot_period" -->
244
- <dd>
245
- <p>return a value of the rotation period of the planet.
246
- default value is "8.64E4 s".</p>
247
- <pre>RETURN VALUE
248
- * rotation period (UNumeric)</pre></dd>
249
- <dt><a name="label:14" id="label:14"><code>rot_period=(<var>rp</var>)</code></a></dt><!-- RDLabel: "rot_period=" -->
250
- <dd>
251
- <p>set a value of the rotation period of the planet.</p>
252
- <pre>RETURN VALUE
253
- * nil</pre></dd>
254
- <dt><a name="label:15" id="label:15"><code>g_forces</code></a></dt><!-- RDLabel: "g_forces" -->
255
- <dd>
256
- <p>return a value of the gravitational acceleration on the surface.
257
- default value is "9.81 m/s2".</p>
258
- <pre>RETURN VALUE
259
- * rotation period (UNumeric)</pre></dd>
260
- <dt><a name="label:16" id="label:16"><code>g_forces=(<var>g</var>)</code></a></dt><!-- RDLabel: "g_forces=" -->
261
- <dd>
262
- <p>set a value of the gravitational acceleration on the surface.</p>
263
- <pre>RETURN VALUE
264
- * nil</pre></dd>
265
- <dt><a name="label:17" id="label:17"><code>p00</code></a></dt><!-- RDLabel: "p00" -->
266
- <dd>
267
- <p>return a value of the reference surface pressure.
268
- default value is "1.0E5 Pa".</p>
269
- <pre>RETURN VALUE
270
- * reference surface pressure (UNumeric)</pre></dd>
271
- <dt><a name="label:18" id="label:18"><code>p00=(<var>p00</var>)</code></a></dt><!-- RDLabel: "p00=" -->
272
- <dd>
273
- <p>set a value of the reference surface pressure.</p>
274
- <pre>RETURN VALUE
275
- * nil</pre></dd>
276
- <dt><a name="label:19" id="label:19"><code>cp</code></a></dt><!-- RDLabel: "cp" -->
277
- <dd>
278
- <p>return a value of the specific heat at constant pressure of the atmosphere.
279
- default value is "1004.0[J.K-1.kg-1]"</p>
280
- <pre>RETURN VALUE
281
- * reference surface pressure (UNumeric)</pre></dd>
282
- <dt><a name="label:20" id="label:20"><code>cp=(<var>cp</var>)</code></a></dt><!-- RDLabel: "cp=" -->
283
- <dd>
284
- <p>set a value of the specific heat at constant pressure of the atmosphere.</p>
285
- <pre>RETURN VALUE
286
- * nil</pre></dd>
287
- <dt><a name="label:21" id="label:21"><code>gas_const</code></a></dt><!-- RDLabel: "gas_const" -->
288
- <dd>
289
- <p>return a value of the gas constant divided by molecular mass.
290
- default value is "287.0[J.K-1.kg-1]".</p>
291
- <pre>RETURN VALUE
292
- * reference surface pressure (UNumeric)</pre></dd>
293
- <dt><a name="label:22" id="label:22"><code>gas_const=(<var>r</var>)</code></a></dt><!-- RDLabel: "gas_const=" -->
294
- <dd>
295
- <p>set a value of the gas constant divided by molecular mass.</p>
296
- <pre>RETURN VALUE
297
- * nil</pre></dd>
298
- <dt><a name="label:23" id="label:23"><code>get_constants</code></a></dt><!-- RDLabel: "get_constants" -->
299
- <dd>
300
- <p>return values of the scale height, radius, rotation period,
301
- gravitational acceleration, reference surface pressure, specific heat,
302
- gas constant.</p>
303
- <pre>RETURN VALUE
304
- * scale height (UNumeric)
305
- * radius (UNumeric)
306
- * rotation period (UNumeric)
307
- * gravitational acceleration (UNumeric)
308
- * reference surface pressure (UNumeric)
309
- * specific heat at constant pressure of the atmosphere (UNumeric)
310
- * gas constant divided by molecular mass (UNumeric)</pre></dd>
311
- <dt><a name="label:24" id="label:24"><code>set_constants(<var>scale_height</var>, <var>radius</var>, <var>rot_period</var>, <var>g_forces</var>, <var>p00</var>, <var>cp</var>, <var>gas_const</var>)</code></a></dt><!-- RDLabel: "set_constants" -->
312
- <dd>
313
- <p>set values of the scale height, radius, rotation period, and gravitational
314
- acceleration.</p>
315
- <pre>ARGUMENTS
316
- * scale height (UNumeric)
317
- * radius (UNumeric)
318
- * rotation period (UNumeric)
319
- * gravitational acceleration (UNumeric)
320
- * reference surface pressure (UNumeric)
321
- * specific heat at constant pressure of the atmosphere (UNumeric)
322
- * gas constant divided by molecular mass (UNumeric)
323
-
324
- RETURN VALUE
325
- * nil</pre></dd>
326
- <dt><a name="label:25" id="label:25"><code>make_gphys(*<var>ax_ary</var>)</code></a></dt><!-- RDLabel: "make_gphys" -->
327
- <dd>
328
- <p>make GPhys objects from Axis or VArray. data components is VArray of
329
- <!-- Reference, RDLabel "Axis.pos" doesn't exist --><em class="label-not-found">Axis.pos</em><!-- Reference end -->.</p>
330
- <p>ARGUMENTS</p>
331
- <ul>
332
- <li>ax_ary (Array): an Array each objects are <!-- Reference, RDLabel "Axis" doesn't exist --><em class="label-not-found">Axis</em><!-- Reference end --> or <!-- Reference, RDLabel "VArray" doesn't exist --><em class="label-not-found">VArray</em><!-- Reference end -->.</li>
333
- </ul>
334
- <p>RETURN VALUE</p>
335
- <ul>
336
- <li>gp_ary (Array): an Array each objects are <!-- Reference, RDLabel "GPhys" doesn't exist --><em class="label-not-found">GPhys</em><!-- Reference end -->.</li>
337
- </ul></dd>
338
- <dt><a name="label:26" id="label:26"><code>to_w_if_omega(<var>gp</var>, <var>z</var>)</code></a></dt><!-- RDLabel: "to_w_if_omega" -->
339
- <dd>
340
- <p>convert to velocity(W) if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is pressure velocity(Omega).
341
- decide from units <!-- Reference, RDLabel "gp.data.units" doesn't exist --><em class="label-not-found">gp.data.units</em><!-- Reference end -->. if it compatible with "m/s" then
342
- deem it <!-- Reference, RDLabel "W" doesn't exist --><em class="label-not-found">W</em><!-- Reference end -->, else if "Pa/s" then deem it <!-- Reference, RDLabel "Omega" doesn't exist --><em class="label-not-found">Omega</em><!-- Reference end -->.</p>
343
- <p>ARGUMENTS</p>
344
- <ul>
345
- <li>gp(GPhys): a GPhys which data represents velocity or pressure velocity.</li>
346
- <li>z(GPhys): a GPhys which data represents z-coordinate.</li>
347
- </ul>
348
- <p>RETURN VALUE</p>
349
- <ul>
350
- <li>gp_w(GPhys): a GPhys which data represents velocity or pressure velocity</li>
351
- </ul></dd>
352
- <dt><a name="label:27" id="label:27"><code>to_z_if_pressure(<var>gp</var>)</code></a></dt><!-- RDLabel: "to_z_if_pressure" -->
353
- <dd>
354
- <p>convert to altitude(z) if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is pressure coordinate (p).
355
- decide from units <!-- Reference, RDLabel "gp.data.units" doesn't exist --><em class="label-not-found">gp.data.units</em><!-- Reference end -->. if it compatible with "Pa" then
356
- deem it (p).</p>
357
- <p>ARGUMENTS</p>
358
- <ul>
359
- <li>gp(GPhys): a GPhys which data represents z or pressure coordinate.</li>
360
- </ul>
361
- <p>RETURN VALUE</p>
362
- <ul>
363
- <li>gp_z(GPhys): a GPhys which data represents z-coordinate.</li>
364
- </ul></dd>
365
- <dt><a name="label:28" id="label:28"><code>to_p_if_altitude(<var>gp</var>)</code></a></dt><!-- RDLabel: "to_p_if_altitude" -->
366
- <dd>
367
- <p>convert to pressure(p) if <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> is altitude(z).
368
- decide from units <!-- Reference, RDLabel "gp.data.units" doesn't exist --><em class="label-not-found">gp.data.units</em><!-- Reference end -->. if it compatible with "m" then
369
- deem it (z).</p>
370
- <p>ARGUMENTS</p>
371
- <ul>
372
- <li>gp(GPhys): a GPhys which data represents z or pressure coordinate.</li>
373
- </ul>
374
- <p>RETURN VALUE</p>
375
- <ul>
376
- <li>gp_p(GPhys): a GPhys which data represents p-coordinate.</li>
377
- </ul></dd>
378
- <dt><a name="label:29" id="label:29"><code>to_theta_if_temperature(<var>gp_t</var>, <var>z</var>, <var>flag_temp_or_theta</var>=<var>true</var>)</code></a></dt><!-- RDLabel: "to_theta_if_temperature" -->
379
- <dd>
380
- <p>convert <!-- Reference, RDLabel "gp" doesn't exist --><em class="label-not-found">gp</em><!-- Reference end --> to potential temperature(\theta) if
381
- <!-- Reference, RDLabel "flag_temp_or_theta" doesn't exist --><em class="label-not-found">flag_temp_or_theta</em><!-- Reference end --> is true. </p>
382
- <p>ARGUMENTS</p>
383
- <ul>
384
- <li><p>gp_t(GPhys): a GPhys which data represents potential temperature or </p>
385
- <pre>temperature.</pre></li>
386
- <li>z(GPhys) : a GPhys which data represents z-coordinate.</li>
387
- <li>flag_temp_or_theta(True or False): a flagment if <!-- Reference, RDLabel "gp_t" doesn't exist --><em class="label-not-found">gp_t</em><!-- Reference end --> convert to.</li>
388
- </ul>
389
- <p>RETURN VALUE</p>
390
- <ul>
391
- <li>gp_theta(GPhys): a GPhys which data represents potential temperature.</li>
392
- </ul></dd>
393
- <dt><a name="label:30" id="label:30"><code>to_rad_if_deg(<var>gp</var>)</code></a></dt><!-- RDLabel: "to_rad_if_deg" -->
394
- <dd>
395
- <p>convert to radian if <!-- Reference, RDLabel "gp.data.units" doesn't exist --><em class="label-not-found">gp.data.units</em><!-- Reference end --> is degrees. </p>
396
- <p>ARGUMENTS</p>
397
- <ul>
398
- <li>gp(GPhys): a GPhys which represents angle (radian or degree).</li>
399
- </ul>
400
- <p>RETURN VALUE</p>
401
- <ul>
402
- <li>gp_rad(GPhys): a GPhys which units is radian.</li>
403
- </ul></dd>
404
- <dt><a name="label:31" id="label:31"><code>eddy_products(<var>gp_u</var>, <var>gp_v</var>, <var>gp_w</var>, <var>gp_t</var>, <var>dimname</var>)</code></a></dt><!-- RDLabel: "eddy_products" -->
405
- <dd>
406
- <p>calculate eddy products along "dimname" dimension. now in this documents,
407
- ' means eddy from zonal mean, and () means zonal mean.</p>
408
- <p>ARGUMENTS</p>
409
- <ul>
410
- <li>gp_u(GPhys): a GPhys which data represents zonal-wind velocity(m/s).</li>
411
- <li>gp_v(GPhys): a GPhys which data represents merdional-wind velocity(m/s).</li>
412
- <li>gp_w(GPhys): a GPhys which data represents vertical-wind velocity(m/s).</li>
413
- <li>gp_t(GPhys): a GPhys which data represents temperature(K).</li>
414
- </ul>
415
- <p>RETURN VALUE</p>
416
- <ul>
417
- <li>uv_dash(GPhys): a GPhys which represents (gp_u'*gp_v').</li>
418
- <li>vt_dash(GPhys): a GPhys which represents (gp_v'*gp_t').</li>
419
- <li>uw_dash(GPhys): a GPhys which represents (gp_u'*gp_w').</li>
420
- </ul></dd>
421
- <dt><a name="label:32" id="label:32"><code>remove_0_at_poles(<var>cos_gp</var>)</code></a></dt><!-- RDLabel: "remove_0_at_poles" -->
422
- <dd>
423
- <p>set value if the cos(latitude) is nearly equal to 0 (|x|&lt; 1e-6) at poles.
424
- at North pole, new value is <a href="(a_cos_lat.val[0] + a_cos_lat.val[1])">2</a>
425
- and at South pole <a href="(a_cos_lat.val[-1] + a_cos_lat.val[-2])">2</a></p>
426
- <pre>ARGUMENTS
427
- * cos_gp(GPhys): a GPhys which represents latitude.
428
-
429
- RETURN VALUE
430
- * new_cos_gp(GPhys): a GPhys which value at poles displaceed.</pre></dd>
431
- <dt><a name="label:33" id="label:33"><code>preparate_for_vector_on_merdional_section(<var>xax</var>, <var>yax</var>)</code></a></dt><!-- RDLabel: "preparate_for_vector_on_merdional_section" -->
432
- <dd>
433
- <p>preparate for <!-- Reference, RDLabel "GGraph::vector_on_merdional_section" doesn't exist --><em class="label-not-found">GGraph::vector_on_merdional_section</em><!-- Reference end --> in
434
- vector_on_merdional_section. </p>
435
- <ol>
436
- <li>check <!-- Reference, RDLabel "yax" doesn't exist --><em class="label-not-found">yax</em><!-- Reference end --> if it is proportional to p </li>
437
- <li>get axis ( a*phi, z ) </li>
438
- </ol>
439
- <pre>ARGUMENTS
440
- * xax(VArray): a VArray which represents x axis.
441
- * yax(VArray): a VArray which represents y axis.
442
-
443
- RETURN VALUE
444
- * va_aphi(VArray): a VArray which represents x-coordinate(radius * phi).
445
- * va_z(VArray): a VArray which represents z-coordinate.
446
- * was_proportional_to_p(True or False): flag original axis proportional to
447
- pressure or z.</pre></dd>
448
- <dt><a name="label:34" id="label:34"><code>strm_rmean(<var>v_rmean</var>, <var>yzdims</var>=[<var>0</var>,<var>1</var>])</code></a></dt><!-- RDLabel: "strm_rmean" -->
449
- <dd>
450
- <p>Calculate mass stream function for residual zonal mean circulation. </p>
451
- <p>ARGUMENTS</p>
452
- <ul>
453
- <li>v_rmean (GPhys): a GPhys which is residual zonal mean V.</li>
454
- <li>yzdims (Array): an Array which represents axis.</li>
455
- </ul>
456
- <p>RETURN VALUE</p>
457
- <ul>
458
- <li>gp_strm (GPhys): a GPhys which is mass stream function on merdional section.</li>
459
- </ul></dd>
460
- </dl>
461
- <h2><a name="label:35" id="label:35">Constants:</a></h2><!-- RDLabel: "Constants:" -->
462
- <dl>
463
- <dt><a name="label:36" id="label:36"><code>Deriv_methods</code></a></dt><!-- RDLabel: "Deriv_methods" -->
464
- <dd>
465
- <p>derivative method name [ 'cderiv', 'threepoint_O2nd_deriv' ]</p></dd>
466
- </dl>
467
-
468
- </body>
469
- </html>
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- <body>
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- <h1><a name="label:0" id="label:0">module NumRu::GGraph in vector_on_merdional_section.rb</a></h1><!-- RDLabel: "module NumRu::GGraph in vector_on_merdional_section.rb" -->
11
- <p>This file defines additional method of NumRu::GGraph. This method is for
12
- drawing vector on merdional sections.</p>
13
- <h2><a name="label:1" id="label:1">Index</a></h2><!-- RDLabel: "Index" -->
14
- <ul>
15
- <li><!-- Reference, RDLabel "module NumRu::GGraph" doesn't exist --><em class="label-not-found">module NumRu::GGraph</em><!-- Reference end -->
16
- <ul>
17
- <li><a href="#label:3">vector_on_merdional_section</a>
18
- Draw vector by selecting the first 2 dimensions
19
- (with GPhys#first2D) if <code>gphys</code> is more than 3D.</li>
20
- </ul></li>
21
- </ul>
22
- <h2><a name="label:2" id="label:2">Module Functions</a></h2><!-- RDLabel: "Module Functions" -->
23
- <dl>
24
- <dt><a name="label:3" id="label:3"><code>vector_on_merdional_section(<var>fx</var>, <var>fy</var>, <var>newframe</var>=<var>true</var>, <var>options</var>=<var>nil</var>)</code></a></dt><!-- RDLabel: "vector_on_merdional_section" -->
25
- <dd>
26
- <p>Draw vector by selecting the first 2 dimensions
27
- (with GPhys#first2D) if <code>gphys</code> is more than 3D.</p>
28
- <p>ARGUMENTS</p>
29
- <ul>
30
- <li>fx (GPhys) : a GPhys whose data is plotted x-componet.</li>
31
- <li>fy (GPhys) : a GPhys whose data is plotted y-componet.</li>
32
- <li>newframe (true/false) : if true, calls <!-- Reference, RDLabel "fig" doesn't exist --><em class="label-not-found">fig</em><!-- Reference end -->, <!-- Reference, RDLabel "axes" doesn't exist --><em class="label-not-found">axes</em><!-- Reference end -->,
33
- <!-- Reference, RDLabel "title" doesn't exist --><em class="label-not-found">title</em><!-- Reference end -->, and <!-- Reference, RDLabel "annotate" doesn't exist --><em class="label-not-found">annotate</em><!-- Reference end --> internally; if false, only
34
- the poly-line is drawn (overlaid to the exiting figure).</li>
35
- <li><p>options (Hash) : options to change the default behavior if specified.
36
- It is a Hash with option names (String) as keys and their values.
37
- Options are interpreted by a NumRu::Misc::KeywordOptAutoHelp,
38
- so you can shorten the keys (by omitting tails) as long as it is
39
- unambiguous.</p>
40
- <pre>option name default value # description:
41
- "title" nil # Title of the figure(if nil, internally
42
- # determined)
43
- "annotate" true # if false, do not put texts on the right
44
- # margin even when newframe==true
45
- "transpose" false # if true, exchange x and y axes
46
- "flow_vect" true # If true, use DCLExt::flow_vect to draw
47
- # vectors; otherwise, DCL::ugvect is used
48
- "xintv" 1 # (Effective only if flow_vect) interval
49
- # sampling in x of data
50
- "yintv" 1 # (Effective only if flow_vect) interval
51
- # of data sampling in y
52
- "factor" 1.0 # (Effective only if flow_vect) scaling
53
- # factor to strech/reduce the arrow
54
- # lengths.
55
- "use_before_scale" #
56
- false #(Effective only unless flow_vect) If true,
57
- # use scale factor before vector.
58
- "unit_vect" false # Show the unit vector
59
- "max_unit_vect" false # (Effective only if flow_vect &amp;&amp;
60
- # unit_vect) If true, use the maximum
61
- # arrows to scale the unit vector;
62
- # otherwise, normalize in V coordinate.</pre></li>
63
- </ul>
64
- <p>RETURN VALUE</p>
65
- <ul>
66
- <li>nil</li>
67
- </ul></dd>
68
- </dl>
69
-
70
- </body>
71
- </html>
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7
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8
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9
- <body>
10
- <h1><a name="label:0" id="label:0">Reference manuals of the GPhys::EP_Flux library</a></h1><!-- RDLabel: "Reference manuals of the GPhys::EP_Flux library" -->
11
- <h2><a name="label:1" id="label:1">GPhys::EP_Flux</a></h2><!-- RDLabel: "GPhys::EP_Flux" -->
12
- <ul>
13
- <li><a href="ep_flux.html">module NumRu::GPhys::EP_Flux</a> :
14
- Module functions of EP-Flux Operators for GPhys.</li>
15
- <li><a href="math-doc/document/index.html">description of mathmatical definition</a>
16
- Description of mathmatical definition about GPhys::EP_Flux</li>
17
- </ul>
18
- <h2><a name="label:2" id="label:2">Additional Graphic Method</a></h2><!-- RDLabel: "Additional Graphic Method" -->
19
- <ul>
20
- <li><a href="ggraph_on_merdional_section.html">module NumRu::GGraph</a> :
21
- Additional features of GGraph to support vector plots on
22
- merdional sections of the earth (or a planet).</li>
23
- </ul>
24
- <h2><a name="label:3" id="label:3">Tutrial(in Japanese)</a></h2><!-- RDLabel: "Tutrial(in Japanese)" -->
25
- <ul>
26
- <li><p><a href="http://www.gfd-dennou.org/arch/ruby/products/gphys/tutorial/ep_flux/index.html">Tutrial for GPhys::EP_Flux</a></p>
27
- <p>Tutorial page for GPhys::EP_Flux users. Now only Japanese.</p></li>
28
- </ul>
29
-
30
- </body>
31
- </html>
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- =begin
2
-
3
- =Reference manuals of the GPhys::EP_Flux library
4
-
5
- ==GPhys::EP_Flux
6
-
7
- * ((<module NumRu::GPhys::EP_Flux|URL:ep_flux.html>)) :
8
- Module functions of EP-Flux Operators for GPhys.
9
- * ((<description of mathmatical definition|URL:math-doc/document/index.html>))
10
- Description of mathmatical definition about GPhys::EP_Flux
11
-
12
- ==Additional Graphic Method
13
-
14
- * ((<module NumRu::GGraph|URL:ggraph_on_merdional_section.html>)) :
15
- Additional features of GGraph to support vector plots on
16
- merdional sections of the earth (or a planet).
17
-
18
- ==Tutrial(in Japanese)
19
-
20
- * ((<Tutrial for GPhys::EP_Flux|URL:http://www.gfd-dennou.org/arch/ruby/products/gphys/tutorial/ep_flux/index.html>))
21
-
22
- Tutorial page for GPhys::EP_Flux users. Now only Japanese.
23
-
24
- =end
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