sequenzo 0.1.18__cp310-cp310-win_amd64.whl → 0.1.19__cp310-cp310-win_amd64.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of sequenzo might be problematic. Click here for more details.

Files changed (396) hide show
  1. sequenzo/__init__.py +39 -7
  2. sequenzo/big_data/clara/utils/get_weighted_diss.c +154 -154
  3. sequenzo/big_data/clara/utils/get_weighted_diss.cp310-win_amd64.pyd +0 -0
  4. sequenzo/clustering/KMedoids.py +39 -0
  5. sequenzo/clustering/clustering_c_code.cp310-win_amd64.pyd +0 -0
  6. sequenzo/clustering/hierarchical_clustering.py +107 -5
  7. sequenzo/define_sequence_data.py +10 -1
  8. sequenzo/dissimilarity_measures/c_code.cp310-win_amd64.pyd +0 -0
  9. sequenzo/dissimilarity_measures/get_distance_matrix.py +1 -2
  10. sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.c +154 -154
  11. sequenzo/dissimilarity_measures/utils/get_sm_trate_substitution_cost_matrix.cp310-win_amd64.pyd +0 -0
  12. sequenzo/dissimilarity_measures/utils/seqconc.c +154 -154
  13. sequenzo/dissimilarity_measures/utils/seqconc.cp310-win_amd64.pyd +0 -0
  14. sequenzo/dissimilarity_measures/utils/seqdss.c +154 -154
  15. sequenzo/dissimilarity_measures/utils/seqdss.cp310-win_amd64.pyd +0 -0
  16. sequenzo/dissimilarity_measures/utils/seqdur.c +154 -154
  17. sequenzo/dissimilarity_measures/utils/seqdur.cp310-win_amd64.pyd +0 -0
  18. sequenzo/dissimilarity_measures/utils/seqlength.c +154 -154
  19. sequenzo/dissimilarity_measures/utils/seqlength.cp310-win_amd64.pyd +0 -0
  20. sequenzo/multidomain/cat.py +0 -53
  21. sequenzo/multidomain/idcd.py +0 -1
  22. sequenzo/openmp_setup.py +233 -0
  23. sequenzo/visualization/plot_transition_matrix.py +21 -22
  24. {sequenzo-0.1.18.dist-info → sequenzo-0.1.19.dist-info}/METADATA +43 -10
  25. sequenzo-0.1.19.dist-info/RECORD +272 -0
  26. sequenzo/dissimilarity_measures/setup.py +0 -35
  27. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LDLT.h +0 -688
  28. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LLT.h +0 -558
  29. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +0 -99
  30. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +0 -682
  31. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +0 -346
  32. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +0 -462
  33. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +0 -91
  34. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/EigenSolver.h +0 -622
  35. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +0 -418
  36. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +0 -226
  37. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +0 -374
  38. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +0 -158
  39. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealQZ.h +0 -657
  40. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealSchur.h +0 -558
  41. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +0 -77
  42. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +0 -904
  43. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +0 -87
  44. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +0 -561
  45. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/AlignedBox.h +0 -486
  46. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/AngleAxis.h +0 -247
  47. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/EulerAngles.h +0 -114
  48. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Homogeneous.h +0 -501
  49. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Hyperplane.h +0 -282
  50. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/OrthoMethods.h +0 -235
  51. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/ParametrizedLine.h +0 -232
  52. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Quaternion.h +0 -870
  53. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Rotation2D.h +0 -199
  54. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/RotationBase.h +0 -206
  55. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Scaling.h +0 -188
  56. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Transform.h +0 -1563
  57. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Translation.h +0 -202
  58. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/Umeyama.h +0 -166
  59. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +0 -168
  60. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/BlockHouseholder.h +0 -110
  61. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/Householder.h +0 -176
  62. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Householder/HouseholderSequence.h +0 -545
  63. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +0 -226
  64. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +0 -212
  65. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +0 -229
  66. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +0 -394
  67. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +0 -453
  68. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +0 -444
  69. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +0 -198
  70. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +0 -117
  71. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/Jacobi/Jacobi.h +0 -483
  72. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/KLUSupport/KLUSupport.h +0 -358
  73. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/Determinant.h +0 -117
  74. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/FullPivLU.h +0 -877
  75. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/InverseImpl.h +0 -432
  76. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/PartialPivLU.h +0 -624
  77. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +0 -83
  78. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/LU/arch/InverseSize4.h +0 -351
  79. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/MetisSupport/MetisSupport.h +0 -137
  80. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Amd.h +0 -435
  81. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +0 -1863
  82. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/OrderingMethods/Ordering.h +0 -153
  83. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +0 -678
  84. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +0 -545
  85. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/ColPivHouseholderQR.h +0 -674
  86. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +0 -97
  87. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +0 -635
  88. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/FullPivHouseholderQR.h +0 -713
  89. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/HouseholderQR.h +0 -434
  90. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +0 -68
  91. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +0 -335
  92. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/BDCSVD.h +0 -1366
  93. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/JacobiSVD.h +0 -812
  94. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +0 -91
  95. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/SVDBase.h +0 -376
  96. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SVD/UpperBidiagonalization.h +0 -414
  97. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +0 -697
  98. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +0 -174
  99. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/AmbiVector.h +0 -378
  100. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/CompressedStorage.h +0 -274
  101. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +0 -352
  102. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +0 -67
  103. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseAssign.h +0 -270
  104. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseBlock.h +0 -571
  105. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseColEtree.h +0 -206
  106. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +0 -370
  107. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +0 -722
  108. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +0 -150
  109. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +0 -342
  110. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +0 -138
  111. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseDot.h +0 -98
  112. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseFuzzy.h +0 -29
  113. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMap.h +0 -305
  114. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMatrix.h +0 -1518
  115. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +0 -398
  116. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparsePermutation.h +0 -178
  117. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseProduct.h +0 -181
  118. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseRedux.h +0 -49
  119. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseRef.h +0 -397
  120. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +0 -659
  121. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSolverBase.h +0 -124
  122. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +0 -198
  123. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseTranspose.h +0 -92
  124. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseTriangularView.h +0 -189
  125. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseUtil.h +0 -186
  126. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseVector.h +0 -478
  127. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/SparseView.h +0 -254
  128. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseCore/TriangularSolver.h +0 -315
  129. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU.h +0 -923
  130. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLUImpl.h +0 -66
  131. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +0 -226
  132. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +0 -110
  133. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +0 -375
  134. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +0 -80
  135. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +0 -181
  136. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +0 -179
  137. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +0 -107
  138. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +0 -280
  139. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +0 -126
  140. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +0 -130
  141. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +0 -223
  142. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +0 -258
  143. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +0 -137
  144. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +0 -136
  145. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +0 -83
  146. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SparseQR/SparseQR.h +0 -758
  147. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdDeque.h +0 -116
  148. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdList.h +0 -106
  149. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/StdVector.h +0 -131
  150. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/StlSupport/details.h +0 -84
  151. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +0 -1025
  152. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +0 -642
  153. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/Image.h +0 -82
  154. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/Kernel.h +0 -79
  155. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/RealSvd2x2.h +0 -55
  156. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/blas.h +0 -440
  157. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapack.h +0 -152
  158. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapacke.h +0 -16292
  159. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/misc/lapacke_mangling.h +0 -17
  160. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +0 -358
  161. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +0 -696
  162. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/BlockMethods.h +0 -1442
  163. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +0 -115
  164. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +0 -177
  165. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/IndexedViewMethods.h +0 -262
  166. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +0 -152
  167. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +0 -95
  168. sequenzo/dissimilarity_measures/src/eigen/Eigen/src/plugins/ReshapedMethods.h +0 -149
  169. sequenzo/dissimilarity_measures/src/eigen/bench/BenchSparseUtil.h +0 -149
  170. sequenzo/dissimilarity_measures/src/eigen/bench/BenchTimer.h +0 -199
  171. sequenzo/dissimilarity_measures/src/eigen/bench/BenchUtil.h +0 -92
  172. sequenzo/dissimilarity_measures/src/eigen/bench/basicbenchmark.h +0 -63
  173. sequenzo/dissimilarity_measures/src/eigen/bench/btl/generic_bench/utils/utilities.h +0 -90
  174. sequenzo/dissimilarity_measures/src/eigen/bench/btl/libs/BLAS/blas.h +0 -675
  175. sequenzo/dissimilarity_measures/src/eigen/bench/btl/libs/BLAS/c_interface_base.h +0 -73
  176. sequenzo/dissimilarity_measures/src/eigen/bench/perf_monitoring/gemm_common.h +0 -67
  177. sequenzo/dissimilarity_measures/src/eigen/bench/perf_monitoring/gemv_common.h +0 -69
  178. sequenzo/dissimilarity_measures/src/eigen/bench/spbench/spbenchsolver.h +0 -573
  179. sequenzo/dissimilarity_measures/src/eigen/bench/spbench/spbenchstyle.h +0 -95
  180. sequenzo/dissimilarity_measures/src/eigen/bench/tensors/benchmark.h +0 -49
  181. sequenzo/dissimilarity_measures/src/eigen/bench/tensors/tensor_benchmarks.h +0 -597
  182. sequenzo/dissimilarity_measures/src/eigen/blas/BandTriangularSolver.h +0 -97
  183. sequenzo/dissimilarity_measures/src/eigen/blas/GeneralRank1Update.h +0 -44
  184. sequenzo/dissimilarity_measures/src/eigen/blas/PackedSelfadjointProduct.h +0 -53
  185. sequenzo/dissimilarity_measures/src/eigen/blas/PackedTriangularMatrixVector.h +0 -79
  186. sequenzo/dissimilarity_measures/src/eigen/blas/PackedTriangularSolverVector.h +0 -88
  187. sequenzo/dissimilarity_measures/src/eigen/blas/Rank2Update.h +0 -57
  188. sequenzo/dissimilarity_measures/src/eigen/blas/common.h +0 -175
  189. sequenzo/dissimilarity_measures/src/eigen/blas/f2c/datatypes.h +0 -24
  190. sequenzo/dissimilarity_measures/src/eigen/blas/level1_cplx_impl.h +0 -155
  191. sequenzo/dissimilarity_measures/src/eigen/blas/level1_impl.h +0 -144
  192. sequenzo/dissimilarity_measures/src/eigen/blas/level1_real_impl.h +0 -122
  193. sequenzo/dissimilarity_measures/src/eigen/blas/level2_cplx_impl.h +0 -360
  194. sequenzo/dissimilarity_measures/src/eigen/blas/level2_impl.h +0 -553
  195. sequenzo/dissimilarity_measures/src/eigen/blas/level2_real_impl.h +0 -306
  196. sequenzo/dissimilarity_measures/src/eigen/blas/level3_impl.h +0 -702
  197. sequenzo/dissimilarity_measures/src/eigen/debug/gdb/__init__.py +0 -1
  198. sequenzo/dissimilarity_measures/src/eigen/debug/gdb/printers.py +0 -314
  199. sequenzo/dissimilarity_measures/src/eigen/demos/mandelbrot/mandelbrot.h +0 -71
  200. sequenzo/dissimilarity_measures/src/eigen/demos/mix_eigen_and_c/binary_library.h +0 -71
  201. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/camera.h +0 -118
  202. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/gpuhelper.h +0 -207
  203. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/icosphere.h +0 -30
  204. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/quaternion_demo.h +0 -114
  205. sequenzo/dissimilarity_measures/src/eigen/demos/opengl/trackball.h +0 -42
  206. sequenzo/dissimilarity_measures/src/eigen/lapack/lapack_common.h +0 -29
  207. sequenzo/dissimilarity_measures/src/eigen/scripts/relicense.py +0 -69
  208. sequenzo/dissimilarity_measures/src/eigen/test/AnnoyingScalar.h +0 -165
  209. sequenzo/dissimilarity_measures/src/eigen/test/MovableScalar.h +0 -35
  210. sequenzo/dissimilarity_measures/src/eigen/test/SafeScalar.h +0 -30
  211. sequenzo/dissimilarity_measures/src/eigen/test/bug1213.h +0 -8
  212. sequenzo/dissimilarity_measures/src/eigen/test/evaluator_common.h +0 -0
  213. sequenzo/dissimilarity_measures/src/eigen/test/gpu_common.h +0 -176
  214. sequenzo/dissimilarity_measures/src/eigen/test/main.h +0 -857
  215. sequenzo/dissimilarity_measures/src/eigen/test/packetmath_test_shared.h +0 -275
  216. sequenzo/dissimilarity_measures/src/eigen/test/product.h +0 -259
  217. sequenzo/dissimilarity_measures/src/eigen/test/random_without_cast_overflow.h +0 -152
  218. sequenzo/dissimilarity_measures/src/eigen/test/solverbase.h +0 -36
  219. sequenzo/dissimilarity_measures/src/eigen/test/sparse.h +0 -204
  220. sequenzo/dissimilarity_measures/src/eigen/test/sparse_solver.h +0 -699
  221. sequenzo/dissimilarity_measures/src/eigen/test/split_test_helper.h +0 -5994
  222. sequenzo/dissimilarity_measures/src/eigen/test/svd_common.h +0 -521
  223. sequenzo/dissimilarity_measures/src/eigen/test/svd_fill.h +0 -118
  224. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/Tensor.h +0 -554
  225. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorArgMax.h +0 -329
  226. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorAssign.h +0 -247
  227. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorBase.h +0 -1176
  228. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorBlock.h +0 -1559
  229. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorBroadcasting.h +0 -1093
  230. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorChipping.h +0 -518
  231. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConcatenation.h +0 -377
  232. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContraction.h +0 -1023
  233. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionBlocking.h +0 -73
  234. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionCuda.h +0 -6
  235. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionGpu.h +0 -1413
  236. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionMapper.h +0 -575
  237. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionSycl.h +0 -1650
  238. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorContractionThreadPool.h +0 -1679
  239. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConversion.h +0 -456
  240. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConvolution.h +0 -1132
  241. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorConvolutionSycl.h +0 -544
  242. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorCostModel.h +0 -214
  243. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorCustomOp.h +0 -347
  244. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDevice.h +0 -137
  245. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceCuda.h +0 -6
  246. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceDefault.h +0 -104
  247. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceGpu.h +0 -389
  248. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceSycl.h +0 -1048
  249. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceThreadPool.h +0 -409
  250. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDimensionList.h +0 -236
  251. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDimensions.h +0 -490
  252. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorEvalTo.h +0 -236
  253. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorEvaluator.h +0 -983
  254. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorExecutor.h +0 -703
  255. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorExpr.h +0 -388
  256. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorFFT.h +0 -669
  257. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorFixedSize.h +0 -379
  258. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorForcedEval.h +0 -237
  259. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorForwardDeclarations.h +0 -191
  260. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorFunctors.h +0 -488
  261. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGenerator.h +0 -302
  262. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGlobalFunctions.h +0 -33
  263. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGpuHipCudaDefines.h +0 -99
  264. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorGpuHipCudaUndefines.h +0 -44
  265. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorIO.h +0 -79
  266. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorImagePatch.h +0 -603
  267. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorIndexList.h +0 -738
  268. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorInflation.h +0 -247
  269. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorInitializer.h +0 -82
  270. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorIntDiv.h +0 -263
  271. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorLayoutSwap.h +0 -216
  272. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMacros.h +0 -98
  273. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMap.h +0 -327
  274. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMeta.h +0 -311
  275. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorMorphing.h +0 -1102
  276. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorPadding.h +0 -708
  277. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorPatch.h +0 -291
  278. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorRandom.h +0 -322
  279. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReduction.h +0 -998
  280. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReductionCuda.h +0 -6
  281. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReductionGpu.h +0 -966
  282. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReductionSycl.h +0 -582
  283. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorRef.h +0 -454
  284. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorReverse.h +0 -465
  285. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorScan.h +0 -528
  286. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorScanSycl.h +0 -513
  287. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorShuffling.h +0 -471
  288. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorStorage.h +0 -161
  289. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorStriding.h +0 -346
  290. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorTrace.h +0 -303
  291. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorTraits.h +0 -264
  292. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorUInt128.h +0 -249
  293. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorVolumePatch.h +0 -629
  294. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/DynamicSymmetry.h +0 -293
  295. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/StaticSymmetry.h +0 -236
  296. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/Symmetry.h +0 -338
  297. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/TensorSymmetry/util/TemplateGroupTheory.h +0 -669
  298. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/Barrier.h +0 -67
  299. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/EventCount.h +0 -249
  300. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/NonBlockingThreadPool.h +0 -486
  301. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/RunQueue.h +0 -236
  302. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadCancel.h +0 -23
  303. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadEnvironment.h +0 -40
  304. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadLocal.h +0 -301
  305. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadPoolInterface.h +0 -48
  306. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/ThreadPool/ThreadYield.h +0 -20
  307. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/CXX11Meta.h +0 -537
  308. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/CXX11Workarounds.h +0 -88
  309. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/EmulateArray.h +0 -261
  310. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/util/MaxSizeVector.h +0 -158
  311. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/AutoDiff/AutoDiffJacobian.h +0 -108
  312. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/AutoDiff/AutoDiffScalar.h +0 -730
  313. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/AutoDiff/AutoDiffVector.h +0 -220
  314. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/BVH/BVAlgorithms.h +0 -293
  315. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/BVH/KdBVH.h +0 -223
  316. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Eigenvalues/ArpackSelfAdjointEigenSolver.h +0 -790
  317. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/EulerAngles/EulerAngles.h +0 -355
  318. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/EulerAngles/EulerSystem.h +0 -305
  319. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/FFT/ei_fftw_impl.h +0 -261
  320. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/FFT/ei_kissfft_impl.h +0 -449
  321. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h +0 -187
  322. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/DGMRES.h +0 -511
  323. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/GMRES.h +0 -335
  324. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/IDRS.h +0 -436
  325. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/IncompleteLU.h +0 -90
  326. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/IterationController.h +0 -154
  327. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/MINRES.h +0 -267
  328. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/IterativeSolvers/Scaling.h +0 -193
  329. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h +0 -305
  330. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMcovar.h +0 -84
  331. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMonestep.h +0 -202
  332. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMpar.h +0 -160
  333. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LMqrsolv.h +0 -188
  334. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/LevenbergMarquardt/LevenbergMarquardt.h +0 -396
  335. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixExponential.h +0 -441
  336. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixFunction.h +0 -569
  337. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixLogarithm.h +0 -373
  338. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixPower.h +0 -705
  339. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/MatrixSquareRoot.h +0 -368
  340. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MatrixFunctions/StemFunction.h +0 -117
  341. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/MoreVectorization/MathFunctions.h +0 -95
  342. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/HybridNonLinearSolver.h +0 -601
  343. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/LevenbergMarquardt.h +0 -657
  344. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/chkder.h +0 -66
  345. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/covar.h +0 -70
  346. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/dogleg.h +0 -107
  347. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/fdjac1.h +0 -79
  348. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/lmpar.h +0 -298
  349. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/qrsolv.h +0 -91
  350. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/r1mpyq.h +0 -30
  351. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/r1updt.h +0 -99
  352. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NonLinearOptimization/rwupdt.h +0 -49
  353. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/NumericalDiff/NumericalDiff.h +0 -130
  354. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Polynomials/Companion.h +0 -280
  355. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Polynomials/PolynomialSolver.h +0 -428
  356. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Polynomials/PolynomialUtils.h +0 -143
  357. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineInplaceLU.h +0 -352
  358. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineMatrix.h +0 -862
  359. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineMatrixBase.h +0 -212
  360. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineProduct.h +0 -295
  361. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineStorage.h +0 -259
  362. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Skyline/SkylineUtil.h +0 -89
  363. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/BlockOfDynamicSparseMatrix.h +0 -122
  364. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/BlockSparseMatrix.h +0 -1079
  365. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/DynamicSparseMatrix.h +0 -404
  366. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/MarketIO.h +0 -282
  367. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h +0 -247
  368. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SparseExtra/RandomSetter.h +0 -349
  369. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsArrayAPI.h +0 -286
  370. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsBFloat16.h +0 -68
  371. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsFunctors.h +0 -357
  372. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsHalf.h +0 -66
  373. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsImpl.h +0 -1959
  374. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/BesselFunctionsPacketMath.h +0 -118
  375. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/HipVectorCompatibility.h +0 -67
  376. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsArrayAPI.h +0 -167
  377. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsBFloat16.h +0 -58
  378. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsFunctors.h +0 -330
  379. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsHalf.h +0 -58
  380. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsImpl.h +0 -2045
  381. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/SpecialFunctionsPacketMath.h +0 -79
  382. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX/BesselFunctions.h +0 -46
  383. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX/SpecialFunctions.h +0 -16
  384. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX512/BesselFunctions.h +0 -46
  385. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/AVX512/SpecialFunctions.h +0 -16
  386. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/GPU/SpecialFunctions.h +0 -369
  387. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/NEON/BesselFunctions.h +0 -54
  388. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/SpecialFunctions/arch/NEON/SpecialFunctions.h +0 -34
  389. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Splines/Spline.h +0 -507
  390. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Splines/SplineFitting.h +0 -431
  391. sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/src/Splines/SplineFwd.h +0 -93
  392. sequenzo/dissimilarity_measures/src/eigen/unsupported/test/matrix_functions.h +0 -67
  393. sequenzo-0.1.18.dist-info/RECORD +0 -638
  394. {sequenzo-0.1.18.dist-info → sequenzo-0.1.19.dist-info}/WHEEL +0 -0
  395. {sequenzo-0.1.18.dist-info → sequenzo-0.1.19.dist-info}/licenses/LICENSE +0 -0
  396. {sequenzo-0.1.18.dist-info → sequenzo-0.1.19.dist-info}/top_level.txt +0 -0
@@ -1,1048 +0,0 @@
1
- // This file is part of Eigen, a lightweight C++ template library
2
- // for linear algebra.
3
- //
4
- // Mehdi Goli Codeplay Software Ltd.
5
- // Ralph Potter Codeplay Software Ltd.
6
- // Luke Iwanski Codeplay Software Ltd.
7
- // Contact: <eigen@codeplay.com>
8
- // Copyright (C) 2016 Benoit Steiner <benoit.steiner.goog@gmail.com>
9
-
10
- //
11
- // This Source Code Form is subject to the terms of the Mozilla
12
- // Public License v. 2.0. If a copy of the MPL was not distributed
13
- // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
14
-
15
- #if defined(EIGEN_USE_SYCL) && !defined(EIGEN_CXX11_TENSOR_TENSOR_DEVICE_SYCL_H)
16
- #define EIGEN_CXX11_TENSOR_TENSOR_DEVICE_SYCL_H
17
- #include <unordered_set>
18
-
19
- namespace Eigen {
20
-
21
- namespace TensorSycl {
22
- namespace internal {
23
-
24
- /// Cache all the device information needed
25
- struct SyclDeviceInfo {
26
- SyclDeviceInfo(cl::sycl::queue queue)
27
- : local_mem_type(
28
- queue.get_device()
29
- .template get_info<cl::sycl::info::device::local_mem_type>()),
30
- max_work_item_sizes(
31
- queue.get_device()
32
- .template get_info<
33
- cl::sycl::info::device::max_work_item_sizes>()),
34
- max_mem_alloc_size(
35
- queue.get_device()
36
- .template get_info<
37
- cl::sycl::info::device::max_mem_alloc_size>()),
38
- max_compute_units(queue.get_device()
39
- .template get_info<
40
- cl::sycl::info::device::max_compute_units>()),
41
- max_work_group_size(
42
- queue.get_device()
43
- .template get_info<
44
- cl::sycl::info::device::max_work_group_size>()),
45
- local_mem_size(
46
- queue.get_device()
47
- .template get_info<cl::sycl::info::device::local_mem_size>()),
48
- platform_name(queue.get_device()
49
- .get_platform()
50
- .template get_info<cl::sycl::info::platform::name>()),
51
- device_name(queue.get_device()
52
- .template get_info<cl::sycl::info::device::name>()),
53
- device_vendor(
54
- queue.get_device()
55
- .template get_info<cl::sycl::info::device::vendor>()) {}
56
-
57
- cl::sycl::info::local_mem_type local_mem_type;
58
- cl::sycl::id<3> max_work_item_sizes;
59
- unsigned long max_mem_alloc_size;
60
- unsigned long max_compute_units;
61
- unsigned long max_work_group_size;
62
- size_t local_mem_size;
63
- std::string platform_name;
64
- std::string device_name;
65
- std::string device_vendor;
66
- };
67
-
68
- } // end namespace internal
69
- } // end namespace TensorSycl
70
-
71
- typedef TensorSycl::internal::buffer_data_type_t buffer_scalar_t;
72
- // All devices (even AMD CPU with intel OpenCL runtime) that support OpenCL and
73
- // can consume SPIR or SPIRV can use the Eigen SYCL backend and consequently
74
- // TensorFlow via the Eigen SYCL Backend.
75
- EIGEN_STRONG_INLINE auto get_sycl_supported_devices()
76
- -> decltype(cl::sycl::device::get_devices()) {
77
- #ifdef EIGEN_SYCL_USE_DEFAULT_SELECTOR
78
- return {cl::sycl::device(cl::sycl::default_selector())};
79
- #else
80
- std::vector<cl::sycl::device> supported_devices;
81
- auto platform_list = cl::sycl::platform::get_platforms();
82
- for (const auto &platform : platform_list) {
83
- auto device_list = platform.get_devices();
84
- auto platform_name =
85
- platform.template get_info<cl::sycl::info::platform::name>();
86
- std::transform(platform_name.begin(), platform_name.end(),
87
- platform_name.begin(), ::tolower);
88
- for (const auto &device : device_list) {
89
- auto vendor = device.template get_info<cl::sycl::info::device::vendor>();
90
- std::transform(vendor.begin(), vendor.end(), vendor.begin(), ::tolower);
91
- bool unsupported_condition =
92
- (device.is_cpu() && platform_name.find("amd") != std::string::npos &&
93
- vendor.find("apu") == std::string::npos) ||
94
- (platform_name.find("experimental") != std::string::npos) ||
95
- device.is_host();
96
- if (!unsupported_condition) {
97
- supported_devices.push_back(device);
98
- }
99
- }
100
- }
101
- return supported_devices;
102
- #endif
103
- }
104
-
105
- class QueueInterface {
106
- public:
107
- /// Creating device by using cl::sycl::selector or cl::sycl::device.
108
- template <typename DeviceOrSelector>
109
- explicit QueueInterface(
110
- const DeviceOrSelector &dev_or_sel, cl::sycl::async_handler handler,
111
- unsigned num_threads = std::thread::hardware_concurrency())
112
- : m_queue(dev_or_sel, handler),
113
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
114
- m_prog(m_queue.get_context(), get_sycl_supported_devices()),
115
- #endif
116
- m_thread_pool(num_threads),
117
- m_device_info(m_queue) {
118
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
119
- m_prog.build_with_kernel_type<DeviceOrSelector>();
120
- auto f = [&](cl::sycl::handler &cgh) {
121
- cgh.single_task<DeviceOrSelector>(m_prog.get_kernel<DeviceOrSelector>(),
122
- [=]() {})
123
- };
124
- EIGEN_SYCL_TRY_CATCH(m_queue.submit(f));
125
- #endif
126
- }
127
-
128
- template <typename DeviceOrSelector>
129
- explicit QueueInterface(
130
- const DeviceOrSelector &dev_or_sel,
131
- unsigned num_threads = std::thread::hardware_concurrency())
132
- : QueueInterface(dev_or_sel,
133
- [this](cl::sycl::exception_list l) {
134
- this->exception_caught_ = this->sycl_async_handler(l);
135
- },
136
- num_threads) {}
137
-
138
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
139
- EIGEN_STRONG_INLINE cl::sycl::program &program() const { return m_prog; }
140
- #endif
141
-
142
- /// Attach an existing buffer to the pointer map, Eigen will not reuse it
143
- EIGEN_STRONG_INLINE void *attach_buffer(
144
- cl::sycl::buffer<buffer_scalar_t, 1> &buf) const {
145
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
146
- return static_cast<void *>(pMapper.add_pointer(buf));
147
- }
148
-
149
- /// Detach previously attached buffer
150
- EIGEN_STRONG_INLINE void detach_buffer(void *p) const {
151
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
152
- TensorSycl::internal::SYCLfree<false>(p, pMapper);
153
- }
154
-
155
- /// Allocating device pointer. This pointer is actually an 8 bytes host
156
- /// pointer used as key to access the sycl device buffer. The reason is that
157
- /// we cannot use device buffer as a pointer as a m_data in Eigen leafNode
158
- /// expressions. So we create a key pointer to be used in Eigen expression
159
- /// construction. When we convert the Eigen construction into the sycl
160
- /// construction we use this pointer as a key in our buffer_map and we make
161
- /// sure that we dedicate only one buffer only for this pointer. The device
162
- /// pointer would be deleted by calling deallocate function.
163
- EIGEN_STRONG_INLINE void *allocate(size_t num_bytes) const {
164
- #if EIGEN_MAX_ALIGN_BYTES > 0
165
- size_t align = num_bytes % EIGEN_MAX_ALIGN_BYTES;
166
- if (align > 0) {
167
- num_bytes += EIGEN_MAX_ALIGN_BYTES - align;
168
- }
169
- #endif
170
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
171
- return TensorSycl::internal::SYCLmalloc(num_bytes, pMapper);
172
- }
173
-
174
- EIGEN_STRONG_INLINE void *allocate_temp(size_t num_bytes) const {
175
- #if EIGEN_MAX_ALIGN_BYTES > 0
176
- size_t align = num_bytes % EIGEN_MAX_ALIGN_BYTES;
177
- if (align > 0) {
178
- num_bytes += EIGEN_MAX_ALIGN_BYTES - align;
179
- }
180
- #endif
181
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
182
- #ifndef EIGEN_SYCL_NO_REUSE_BUFFERS
183
- if (scratch_buffers.empty()) {
184
- return TensorSycl::internal::SYCLmalloc(num_bytes, pMapper);
185
- ;
186
- } else {
187
- for (auto it = scratch_buffers.begin(); it != scratch_buffers.end();) {
188
- auto buff = pMapper.get_buffer(*it);
189
- if (buff.get_size() >= num_bytes) {
190
- auto ptr = *it;
191
- scratch_buffers.erase(it);
192
- return ptr;
193
- } else {
194
- ++it;
195
- }
196
- }
197
- return TensorSycl::internal::SYCLmalloc(num_bytes, pMapper);
198
- }
199
- #else
200
- return TensorSycl::internal::SYCLmalloc(num_bytes, pMapper);
201
- #endif
202
- }
203
- template <typename data_t>
204
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE TensorSycl::internal::RangeAccess<
205
- cl::sycl::access::mode::read_write, data_t>
206
- get(data_t *data) const {
207
- return get_range_accessor<cl::sycl::access::mode::read_write, data_t>(data);
208
- }
209
- template <typename data_t>
210
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE data_t *get(
211
- TensorSycl::internal::RangeAccess<cl::sycl::access::mode::read_write,
212
- data_t>
213
- data) const {
214
- return static_cast<data_t *>(data.get_virtual_pointer());
215
- }
216
-
217
- EIGEN_STRONG_INLINE void deallocate_temp(void *p) const {
218
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
219
- #ifndef EIGEN_SYCL_NO_REUSE_BUFFERS
220
- scratch_buffers.insert(p);
221
- #else
222
- TensorSycl::internal::SYCLfree(p, pMapper);
223
- #endif
224
- }
225
- template <cl::sycl::access::mode AcMd, typename T>
226
- EIGEN_STRONG_INLINE void deallocate_temp(
227
- const TensorSycl::internal::RangeAccess<AcMd, T> &p) const {
228
- deallocate_temp(p.get_virtual_pointer());
229
- }
230
-
231
- /// This is used to deallocate the device pointer. p is used as a key inside
232
- /// the map to find the device buffer and delete it.
233
- EIGEN_STRONG_INLINE void deallocate(void *p) const {
234
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
235
- TensorSycl::internal::SYCLfree(p, pMapper);
236
- }
237
-
238
- EIGEN_STRONG_INLINE void deallocate_all() const {
239
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
240
- TensorSycl::internal::SYCLfreeAll(pMapper);
241
- #ifndef EIGEN_SYCL_NO_REUSE_BUFFERS
242
- scratch_buffers.clear();
243
- #endif
244
- }
245
-
246
- /// The memcpyHostToDevice is used to copy the data from host to device
247
- /// The destination pointer could be deleted before the copy happend which is
248
- /// why a callback function is needed. By default if none is provided, the
249
- /// function is blocking.
250
- EIGEN_STRONG_INLINE void memcpyHostToDevice(
251
- void *dst, const void *src, size_t n,
252
- std::function<void()> callback) const {
253
- static const auto write_mode = cl::sycl::access::mode::discard_write;
254
- static const auto global_access = cl::sycl::access::target::global_buffer;
255
- typedef cl::sycl::accessor<buffer_scalar_t, 1, write_mode, global_access>
256
- write_accessor;
257
- if (n == 0) {
258
- if (callback) callback();
259
- return;
260
- }
261
- n /= sizeof(buffer_scalar_t);
262
- auto f = [&](cl::sycl::handler &cgh) {
263
- write_accessor dst_acc = get_range_accessor<write_mode>(cgh, dst, n);
264
- buffer_scalar_t const *ptr = static_cast<buffer_scalar_t const *>(src);
265
- auto non_deleter = [](buffer_scalar_t const *) {};
266
- std::shared_ptr<const buffer_scalar_t> s_ptr(ptr, non_deleter);
267
- cgh.copy(s_ptr, dst_acc);
268
- };
269
- cl::sycl::event e;
270
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(f));
271
- synchronize_and_callback(e, callback);
272
- }
273
-
274
- /// The memcpyDeviceToHost is used to copy the data from device to host.
275
- /// The source pointer could be deleted before the copy happend which is
276
- /// why a callback function is needed. By default if none is provided, the
277
- /// function is blocking.
278
- EIGEN_STRONG_INLINE void memcpyDeviceToHost(
279
- void *dst, const void *src, size_t n,
280
- std::function<void()> callback) const {
281
- static const auto read_mode = cl::sycl::access::mode::read;
282
- static const auto global_access = cl::sycl::access::target::global_buffer;
283
- typedef cl::sycl::accessor<buffer_scalar_t, 1, read_mode, global_access>
284
- read_accessor;
285
- if (n == 0) {
286
- if (callback) callback();
287
- return;
288
- }
289
- n /= sizeof(buffer_scalar_t);
290
- auto f = [&](cl::sycl::handler &cgh) {
291
- read_accessor src_acc = get_range_accessor<read_mode>(cgh, src, n);
292
- buffer_scalar_t *ptr = static_cast<buffer_scalar_t *>(dst);
293
- auto non_deleter = [](buffer_scalar_t *) {};
294
- std::shared_ptr<buffer_scalar_t> s_ptr(ptr, non_deleter);
295
- cgh.copy(src_acc, s_ptr);
296
- };
297
- cl::sycl::event e;
298
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(f));
299
- synchronize_and_callback(e, callback);
300
- }
301
-
302
- /// The memcpy function.
303
- /// No callback is required here as both arguments are on the device
304
- /// and SYCL can handle the dependency.
305
- EIGEN_STRONG_INLINE void memcpy(void *dst, const void *src, size_t n) const {
306
- static const auto read_mode = cl::sycl::access::mode::read;
307
- static const auto write_mode = cl::sycl::access::mode::discard_write;
308
- if (n == 0) {
309
- return;
310
- }
311
- n /= sizeof(buffer_scalar_t);
312
- auto f = [&](cl::sycl::handler &cgh) {
313
- auto src_acc = get_range_accessor<read_mode>(cgh, src, n);
314
- auto dst_acc = get_range_accessor<write_mode>(cgh, dst, n);
315
- cgh.copy(src_acc, dst_acc);
316
- };
317
- cl::sycl::event e;
318
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(f));
319
- async_synchronize(e);
320
- }
321
-
322
- /// the memset function.
323
- /// No callback is required here as both arguments are on the device
324
- /// and SYCL can handle the dependency.
325
- EIGEN_STRONG_INLINE void memset(void *data, int c, size_t n) const {
326
- static const auto write_mode = cl::sycl::access::mode::discard_write;
327
- if (n == 0) {
328
- return;
329
- }
330
- n /= sizeof(buffer_scalar_t);
331
- auto f = [&](cl::sycl::handler &cgh) {
332
- auto dst_acc = get_range_accessor<write_mode>(cgh, data, n);
333
- // The cast to uint8_t is here to match the behaviour of the standard
334
- // memset. The cast to buffer_scalar_t is needed to match the type of the
335
- // accessor (in case buffer_scalar_t is not uint8_t)
336
- cgh.fill(dst_acc, static_cast<buffer_scalar_t>(static_cast<uint8_t>(c)));
337
- };
338
- cl::sycl::event e;
339
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(f));
340
- async_synchronize(e);
341
- }
342
-
343
- /// Get a range accessor to the virtual pointer's device memory. This range
344
- /// accessor will allow access to the memory from the pointer to the end of
345
- /// the buffer.
346
- ///
347
- /// NOTE: Inside a kernel the range accessor will always be indexed from the
348
- /// start of the buffer, so the offset in the accessor is only used by
349
- /// methods like handler::copy and will not be available inside a kernel.
350
- template <cl::sycl::access::mode AcMd, typename T>
351
- EIGEN_STRONG_INLINE TensorSycl::internal::RangeAccess<AcMd, T>
352
- get_range_accessor(const void *ptr) const {
353
- static const auto global_access = cl::sycl::access::target::global_buffer;
354
- static const auto is_place_holder = cl::sycl::access::placeholder::true_t;
355
- typedef TensorSycl::internal::RangeAccess<AcMd, T> ret_type;
356
- typedef const TensorSycl::internal::buffer_data_type_t *internal_ptr_t;
357
-
358
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
359
-
360
- auto original_buffer = pMapper.get_buffer(ptr);
361
- const ptrdiff_t offset = pMapper.get_offset(ptr);
362
- const ptrdiff_t typed_offset = offset / sizeof(T);
363
- eigen_assert(typed_offset >= 0);
364
- const auto typed_size = original_buffer.get_size() / sizeof(T);
365
- auto buffer = original_buffer.template reinterpret<
366
- typename Eigen::internal::remove_const<T>::type>(
367
- cl::sycl::range<1>(typed_size));
368
- const ptrdiff_t size = buffer.get_count() - typed_offset;
369
- eigen_assert(size >= 0);
370
- typedef cl::sycl::accessor<typename Eigen::internal::remove_const<T>::type,
371
- 1, AcMd, global_access, is_place_holder>
372
- placeholder_accessor_t;
373
- const auto start_ptr = static_cast<internal_ptr_t>(ptr) - offset;
374
- return ret_type(placeholder_accessor_t(buffer, cl::sycl::range<1>(size),
375
- cl::sycl::id<1>(typed_offset)),
376
- static_cast<size_t>(typed_offset),
377
- reinterpret_cast<std::intptr_t>(start_ptr));
378
- }
379
-
380
- /// Get a range accessor to the virtual pointer's device memory with a
381
- /// specified size.
382
- template <cl::sycl::access::mode AcMd, typename Index>
383
- EIGEN_STRONG_INLINE cl::sycl::accessor<
384
- buffer_scalar_t, 1, AcMd, cl::sycl::access::target::global_buffer>
385
- get_range_accessor(cl::sycl::handler &cgh, const void *ptr,
386
- const Index n_bytes) const {
387
- static const auto global_access = cl::sycl::access::target::global_buffer;
388
- eigen_assert(n_bytes >= 0);
389
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
390
- auto buffer = pMapper.get_buffer(ptr);
391
- const ptrdiff_t offset = pMapper.get_offset(ptr);
392
- eigen_assert(offset >= 0);
393
- eigen_assert(offset + n_bytes <= buffer.get_size());
394
- return buffer.template get_access<AcMd, global_access>(
395
- cgh, cl::sycl::range<1>(n_bytes), cl::sycl::id<1>(offset));
396
- }
397
-
398
- /// Creation of sycl accessor for a buffer. This function first tries to find
399
- /// the buffer in the buffer_map. If found it gets the accessor from it, if
400
- /// not, the function then adds an entry by creating a sycl buffer for that
401
- /// particular pointer.
402
- template <cl::sycl::access::mode AcMd>
403
- EIGEN_STRONG_INLINE cl::sycl::accessor<
404
- buffer_scalar_t, 1, AcMd, cl::sycl::access::target::global_buffer>
405
- get_sycl_accessor(cl::sycl::handler &cgh, const void *ptr) const {
406
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
407
- return pMapper.get_buffer(ptr)
408
- .template get_access<AcMd, cl::sycl::access::target::global_buffer>(
409
- cgh);
410
- }
411
-
412
- EIGEN_STRONG_INLINE cl::sycl::buffer<buffer_scalar_t, 1> get_sycl_buffer(
413
- const void *ptr) const {
414
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
415
- return pMapper.get_buffer(ptr);
416
- }
417
-
418
- EIGEN_STRONG_INLINE ptrdiff_t get_offset(const void *ptr) const {
419
- std::lock_guard<std::mutex> lock(pmapper_mutex_);
420
- return pMapper.get_offset(ptr);
421
- }
422
-
423
- template <typename OutScalar, typename sycl_kernel, typename Lhs,
424
- typename Rhs, typename OutPtr, typename Range, typename Index,
425
- typename... T>
426
- EIGEN_ALWAYS_INLINE void binary_kernel_launcher(const Lhs &lhs,
427
- const Rhs &rhs, OutPtr outptr,
428
- Range thread_range,
429
- Index scratchSize,
430
- T... var) const {
431
- auto kernel_functor = [=](cl::sycl::handler &cgh) {
432
- // binding the placeholder accessors to a commandgroup handler
433
- lhs.bind(cgh);
434
- rhs.bind(cgh);
435
- outptr.bind(cgh);
436
- typedef cl::sycl::accessor<OutScalar, 1,
437
- cl::sycl::access::mode::read_write,
438
- cl::sycl::access::target::local>
439
- LocalAccessor;
440
-
441
- LocalAccessor scratch(cl::sycl::range<1>(scratchSize), cgh);
442
- cgh.parallel_for(
443
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
444
- program().template get_kernel<sycl_kernel>(),
445
- #endif
446
- thread_range, sycl_kernel(scratch, lhs, rhs, outptr, var...));
447
- };
448
- cl::sycl::event e;
449
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(kernel_functor));
450
- async_synchronize(e);
451
- }
452
-
453
- template <typename OutScalar, typename sycl_kernel, typename InPtr,
454
- typename OutPtr, typename Range, typename Index, typename... T>
455
- EIGEN_ALWAYS_INLINE void unary_kernel_launcher(const InPtr &inptr,
456
- OutPtr &outptr,
457
- Range thread_range,
458
- Index scratchSize,
459
- T... var) const {
460
- auto kernel_functor = [=](cl::sycl::handler &cgh) {
461
- // binding the placeholder accessors to a commandgroup handler
462
- inptr.bind(cgh);
463
- outptr.bind(cgh);
464
- typedef cl::sycl::accessor<OutScalar, 1,
465
- cl::sycl::access::mode::read_write,
466
- cl::sycl::access::target::local>
467
- LocalAccessor;
468
-
469
- LocalAccessor scratch(cl::sycl::range<1>(scratchSize), cgh);
470
- cgh.parallel_for(
471
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
472
- program().template get_kernel<sycl_kernel>(),
473
- #endif
474
- thread_range, sycl_kernel(scratch, inptr, outptr, var...));
475
- };
476
- cl::sycl::event e;
477
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(kernel_functor));
478
- async_synchronize(e);
479
- }
480
-
481
- template <typename OutScalar, typename sycl_kernel, typename InPtr,
482
- typename Range, typename Index, typename... T>
483
- EIGEN_ALWAYS_INLINE void nullary_kernel_launcher(const InPtr &inptr,
484
- Range thread_range,
485
- Index scratchSize,
486
- T... var) const {
487
- auto kernel_functor = [=](cl::sycl::handler &cgh) {
488
- // binding the placeholder accessors to a commandgroup handler
489
- inptr.bind(cgh);
490
- typedef cl::sycl::accessor<OutScalar, 1,
491
- cl::sycl::access::mode::read_write,
492
- cl::sycl::access::target::local>
493
- LocalAccessor;
494
-
495
- LocalAccessor scratch(cl::sycl::range<1>(scratchSize), cgh);
496
- cgh.parallel_for(
497
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
498
- program().template get_kernel<sycl_kernel>(),
499
- #endif
500
- thread_range, sycl_kernel(scratch, inptr, var...));
501
- };
502
- cl::sycl::event e;
503
- EIGEN_SYCL_TRY_CATCH(e = m_queue.submit(kernel_functor));
504
- async_synchronize(e);
505
- }
506
-
507
-
508
- EIGEN_STRONG_INLINE void synchronize() const {
509
- #ifdef EIGEN_EXCEPTIONS
510
- m_queue.wait_and_throw();
511
- #else
512
- m_queue.wait();
513
- #endif
514
- }
515
-
516
-
517
- EIGEN_STRONG_INLINE void async_synchronize(cl::sycl::event e) const {
518
- set_latest_event(e);
519
- #ifndef EIGEN_SYCL_ASYNC_EXECUTION
520
- synchronize();
521
- #endif
522
- }
523
-
524
- template <typename Index>
525
- EIGEN_STRONG_INLINE void parallel_for_setup(Index n, Index &tileSize,
526
- Index &rng, Index &GRange) const {
527
- tileSize = static_cast<Index>(getNearestPowerOfTwoWorkGroupSize());
528
- tileSize = std::min(static_cast<Index>(EIGEN_SYCL_LOCAL_THREAD_DIM0 *
529
- EIGEN_SYCL_LOCAL_THREAD_DIM1),
530
- static_cast<Index>(tileSize));
531
- rng = n;
532
- if (rng == 0) rng = static_cast<Index>(1);
533
- GRange = rng;
534
- if (tileSize > GRange)
535
- tileSize = GRange;
536
- else if (GRange > tileSize) {
537
- Index xMode = static_cast<Index>(GRange % tileSize);
538
- if (xMode != 0) GRange += static_cast<Index>(tileSize - xMode);
539
- }
540
- }
541
-
542
- /// This is used to prepare the number of threads and also the number of
543
- /// threads per block for sycl kernels
544
- template <typename Index>
545
- EIGEN_STRONG_INLINE void parallel_for_setup(
546
- const std::array<Index, 2> &input_dim, cl::sycl::range<2> &global_range,
547
- cl::sycl::range<2> &local_range) const {
548
- std::array<Index, 2> input_range = input_dim;
549
- Index max_workgroup_Size =
550
- static_cast<Index>(getNearestPowerOfTwoWorkGroupSize());
551
- max_workgroup_Size =
552
- std::min(static_cast<Index>(EIGEN_SYCL_LOCAL_THREAD_DIM0 *
553
- EIGEN_SYCL_LOCAL_THREAD_DIM1),
554
- static_cast<Index>(max_workgroup_Size));
555
- Index pow_of_2 = static_cast<Index>(std::log2(max_workgroup_Size));
556
- local_range[1] =
557
- static_cast<Index>(std::pow(2, static_cast<Index>(pow_of_2 / 2)));
558
- input_range[1] = input_dim[1];
559
- if (input_range[1] == 0) input_range[1] = static_cast<Index>(1);
560
- global_range[1] = input_range[1];
561
- if (local_range[1] > global_range[1])
562
- local_range[1] = global_range[1];
563
- else if (global_range[1] > local_range[1]) {
564
- Index xMode = static_cast<Index>(global_range[1] % local_range[1]);
565
- if (xMode != 0)
566
- global_range[1] += static_cast<Index>(local_range[1] - xMode);
567
- }
568
- local_range[0] = static_cast<Index>(max_workgroup_Size / local_range[1]);
569
- input_range[0] = input_dim[0];
570
- if (input_range[0] == 0) input_range[0] = static_cast<Index>(1);
571
- global_range[0] = input_range[0];
572
- if (local_range[0] > global_range[0])
573
- local_range[0] = global_range[0];
574
- else if (global_range[0] > local_range[0]) {
575
- Index xMode = static_cast<Index>(global_range[0] % local_range[0]);
576
- if (xMode != 0)
577
- global_range[0] += static_cast<Index>(local_range[0] - xMode);
578
- }
579
- }
580
-
581
- /// This is used to prepare the number of threads and also the number of
582
- /// threads per block for sycl kernels
583
- template <typename Index>
584
- EIGEN_STRONG_INLINE void parallel_for_setup(
585
- const std::array<Index, 3> &input_dim, cl::sycl::range<3> &global_range,
586
- cl::sycl::range<3> &local_range) const {
587
- std::array<Index, 3> input_range = input_dim;
588
- Index max_workgroup_Size =
589
- static_cast<Index>(getNearestPowerOfTwoWorkGroupSize());
590
- max_workgroup_Size =
591
- std::min(static_cast<Index>(EIGEN_SYCL_LOCAL_THREAD_DIM0 *
592
- EIGEN_SYCL_LOCAL_THREAD_DIM1),
593
- static_cast<Index>(max_workgroup_Size));
594
- Index pow_of_2 = static_cast<Index>(std::log2(max_workgroup_Size));
595
- local_range[2] =
596
- static_cast<Index>(std::pow(2, static_cast<Index>(pow_of_2 / 3)));
597
- input_range[2] = input_dim[2];
598
- if (input_range[2] == 0) input_range[1] = static_cast<Index>(1);
599
- global_range[2] = input_range[2];
600
- if (local_range[2] > global_range[2])
601
- local_range[2] = global_range[2];
602
- else if (global_range[2] > local_range[2]) {
603
- Index xMode = static_cast<Index>(global_range[2] % local_range[2]);
604
- if (xMode != 0)
605
- global_range[2] += static_cast<Index>(local_range[2] - xMode);
606
- }
607
- pow_of_2 = static_cast<Index>(
608
- std::log2(static_cast<Index>(max_workgroup_Size / local_range[2])));
609
- local_range[1] =
610
- static_cast<Index>(std::pow(2, static_cast<Index>(pow_of_2 / 2)));
611
- input_range[1] = input_dim[1];
612
- if (input_range[1] == 0) input_range[1] = static_cast<Index>(1);
613
- global_range[1] = input_range[1];
614
- if (local_range[1] > global_range[1])
615
- local_range[1] = global_range[1];
616
- else if (global_range[1] > local_range[1]) {
617
- Index xMode = static_cast<Index>(global_range[1] % local_range[1]);
618
- if (xMode != 0)
619
- global_range[1] += static_cast<Index>(local_range[1] - xMode);
620
- }
621
- local_range[0] = static_cast<Index>(max_workgroup_Size /
622
- (local_range[1] * local_range[2]));
623
- input_range[0] = input_dim[0];
624
- if (input_range[0] == 0) input_range[0] = static_cast<Index>(1);
625
- global_range[0] = input_range[0];
626
- if (local_range[0] > global_range[0])
627
- local_range[0] = global_range[0];
628
- else if (global_range[0] > local_range[0]) {
629
- Index xMode = static_cast<Index>(global_range[0] % local_range[0]);
630
- if (xMode != 0)
631
- global_range[0] += static_cast<Index>(local_range[0] - xMode);
632
- }
633
- }
634
-
635
- EIGEN_STRONG_INLINE bool has_local_memory() const {
636
- #if !defined(EIGEN_SYCL_LOCAL_MEM) && defined(EIGEN_SYCL_NO_LOCAL_MEM)
637
- return false;
638
- #elif defined(EIGEN_SYCL_LOCAL_MEM) && !defined(EIGEN_SYCL_NO_LOCAL_MEM)
639
- return true;
640
- #else
641
- return m_device_info.local_mem_type ==
642
- cl::sycl::info::local_mem_type::local;
643
- #endif
644
- }
645
-
646
- EIGEN_STRONG_INLINE unsigned long max_buffer_size() const {
647
- return m_device_info.max_mem_alloc_size;
648
- }
649
-
650
- EIGEN_STRONG_INLINE unsigned long getNumSyclMultiProcessors() const {
651
- return m_device_info.max_compute_units;
652
- }
653
-
654
- EIGEN_STRONG_INLINE unsigned long maxSyclThreadsPerBlock() const {
655
- return m_device_info.max_work_group_size;
656
- }
657
-
658
- EIGEN_STRONG_INLINE cl::sycl::id<3> maxWorkItemSizes() const {
659
- return m_device_info.max_work_item_sizes;
660
- }
661
-
662
- /// No need for sycl it should act the same as CPU version
663
- EIGEN_STRONG_INLINE int majorDeviceVersion() const { return 1; }
664
-
665
- EIGEN_STRONG_INLINE unsigned long maxSyclThreadsPerMultiProcessor() const {
666
- // OpenCL doesnot have such concept
667
- return 2;
668
- }
669
-
670
- EIGEN_STRONG_INLINE size_t sharedMemPerBlock() const {
671
- return m_device_info.local_mem_size;
672
- }
673
-
674
- // This function returns the nearest power of 2 Work-group size which is <=
675
- // maximum device workgroup size.
676
- EIGEN_STRONG_INLINE size_t getNearestPowerOfTwoWorkGroupSize() const {
677
- return getPowerOfTwo(m_device_info.max_work_group_size, false);
678
- }
679
-
680
- EIGEN_STRONG_INLINE std::string getPlatformName() const {
681
- return m_device_info.platform_name;
682
- }
683
-
684
- EIGEN_STRONG_INLINE std::string getDeviceName() const {
685
- return m_device_info.device_name;
686
- }
687
-
688
- EIGEN_STRONG_INLINE std::string getDeviceVendor() const {
689
- return m_device_info.device_vendor;
690
- }
691
-
692
- // This function returns the nearest power of 2
693
- // if roundup is true returns result>=wgsize
694
- // else it return result <= wgsize
695
- EIGEN_STRONG_INLINE size_t getPowerOfTwo(size_t wGSize, bool roundUp) const {
696
- if (roundUp) --wGSize;
697
- wGSize |= (wGSize >> 1);
698
- wGSize |= (wGSize >> 2);
699
- wGSize |= (wGSize >> 4);
700
- wGSize |= (wGSize >> 8);
701
- wGSize |= (wGSize >> 16);
702
- #if EIGEN_ARCH_x86_64 || EIGEN_ARCH_ARM64 || EIGEN_OS_WIN64
703
- wGSize |= (wGSize >> 32);
704
- #endif
705
- return ((!roundUp) ? (wGSize - (wGSize >> 1)) : ++wGSize);
706
- }
707
-
708
- EIGEN_STRONG_INLINE cl::sycl::queue &sycl_queue() const { return m_queue; }
709
-
710
- // This function checks if the runtime recorded an error for the
711
- // underlying stream device.
712
- EIGEN_STRONG_INLINE bool ok() const {
713
- if (!exception_caught_) {
714
- synchronize();
715
- }
716
- return !exception_caught_;
717
- }
718
-
719
- EIGEN_STRONG_INLINE cl::sycl::event get_latest_event() const {
720
- #ifdef EIGEN_SYCL_STORE_LATEST_EVENT
721
- std::lock_guard<std::mutex> lock(event_mutex_);
722
- return latest_events_[std::this_thread::get_id()];
723
- #else
724
- eigen_assert(false);
725
- return cl::sycl::event();
726
- #endif
727
- }
728
-
729
- // destructor
730
- ~QueueInterface() {
731
- pMapper.clear();
732
- #ifndef EIGEN_SYCL_NO_REUSE_BUFFERS
733
- scratch_buffers.clear();
734
- #endif
735
- }
736
-
737
- protected:
738
- EIGEN_STRONG_INLINE void set_latest_event(cl::sycl::event e) const {
739
- #ifdef EIGEN_SYCL_STORE_LATEST_EVENT
740
- std::lock_guard<std::mutex> lock(event_mutex_);
741
- latest_events_[std::this_thread::get_id()] = e;
742
- #else
743
- EIGEN_UNUSED_VARIABLE(e);
744
- #endif
745
- }
746
-
747
- void synchronize_and_callback(cl::sycl::event e,
748
- const std::function<void()> &callback) const {
749
- set_latest_event(e);
750
- if (callback) {
751
- auto callback_ = [=]() {
752
- #ifdef EIGEN_EXCEPTIONS
753
- cl::sycl::event(e).wait_and_throw();
754
- #else
755
- cl::sycl::event(e).wait();
756
- #endif
757
- callback();
758
- };
759
- m_thread_pool.Schedule(std::move(callback_));
760
- } else {
761
- #ifdef EIGEN_EXCEPTIONS
762
- m_queue.wait_and_throw();
763
- #else
764
- m_queue.wait();
765
- #endif
766
- }
767
- }
768
-
769
- bool sycl_async_handler(cl::sycl::exception_list exceptions) const {
770
- bool exception_caught = false;
771
- for (const auto &e : exceptions) {
772
- if (e) {
773
- exception_caught = true;
774
- EIGEN_THROW_X(e);
775
- }
776
- }
777
- return exception_caught;
778
- }
779
-
780
- /// class members:
781
- bool exception_caught_ = false;
782
-
783
- mutable std::mutex pmapper_mutex_;
784
-
785
- #ifdef EIGEN_SYCL_STORE_LATEST_EVENT
786
- mutable std::mutex event_mutex_;
787
- mutable std::unordered_map<std::thread::id, cl::sycl::event> latest_events_;
788
- #endif
789
-
790
- /// std::map is the container used to make sure that we create only one buffer
791
- /// per pointer. The lifespan of the buffer now depends on the lifespan of
792
- /// SyclDevice. If a non-read-only pointer is needed to be accessed on the
793
- /// host we should manually deallocate it.
794
- mutable TensorSycl::internal::PointerMapper pMapper;
795
- #ifndef EIGEN_SYCL_NO_REUSE_BUFFERS
796
- mutable std::unordered_set<void *> scratch_buffers;
797
- #endif
798
- /// sycl queue
799
- mutable cl::sycl::queue m_queue;
800
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
801
- mutable cl::sycl::program m_prog;
802
- #endif
803
-
804
- /// The thread pool is used to wait on events and call callbacks
805
- /// asynchronously
806
- mutable Eigen::ThreadPool m_thread_pool;
807
-
808
- const TensorSycl::internal::SyclDeviceInfo m_device_info;
809
- };
810
-
811
- struct SyclDeviceBase {
812
- /// QueueInterface is not owned. it is the caller's responsibility to destroy
813
- /// it
814
- const QueueInterface *m_queue_stream;
815
- explicit SyclDeviceBase(const QueueInterface *queue_stream)
816
- : m_queue_stream(queue_stream) {}
817
- EIGEN_STRONG_INLINE const QueueInterface *queue_stream() const {
818
- return m_queue_stream;
819
- }
820
- };
821
-
822
- // Here is a sycl device struct which accept the sycl queue interface
823
- // as an input
824
- struct SyclDevice : public SyclDeviceBase {
825
- explicit SyclDevice(const QueueInterface *queue_stream)
826
- : SyclDeviceBase(queue_stream) {}
827
-
828
- // this is the accessor used to construct the evaluator
829
- template <cl::sycl::access::mode AcMd, typename T>
830
- EIGEN_STRONG_INLINE TensorSycl::internal::RangeAccess<AcMd, T>
831
- get_range_accessor(const void *ptr) const {
832
- return queue_stream()->template get_range_accessor<AcMd, T>(ptr);
833
- }
834
-
835
- // get sycl accessor
836
- template <cl::sycl::access::mode AcMd>
837
- EIGEN_STRONG_INLINE cl::sycl::accessor<
838
- buffer_scalar_t, 1, AcMd, cl::sycl::access::target::global_buffer>
839
- get_sycl_accessor(cl::sycl::handler &cgh, const void *ptr) const {
840
- return queue_stream()->template get_sycl_accessor<AcMd>(cgh, ptr);
841
- }
842
-
843
- /// Accessing the created sycl device buffer for the device pointer
844
- EIGEN_STRONG_INLINE cl::sycl::buffer<buffer_scalar_t, 1> get_sycl_buffer(
845
- const void *ptr) const {
846
- return queue_stream()->get_sycl_buffer(ptr);
847
- }
848
-
849
- /// This is used to prepare the number of threads and also the number of
850
- /// threads per block for sycl kernels
851
- template <typename Index>
852
- EIGEN_STRONG_INLINE void parallel_for_setup(Index n, Index &tileSize,
853
- Index &rng, Index &GRange) const {
854
- queue_stream()->parallel_for_setup(n, tileSize, rng, GRange);
855
- }
856
-
857
- /// This is used to prepare the number of threads and also the number of
858
- /// threads per block for sycl kernels
859
- template <typename Index>
860
- EIGEN_STRONG_INLINE void parallel_for_setup(
861
- const std::array<Index, 2> &input_dim, cl::sycl::range<2> &global_range,
862
- cl::sycl::range<2> &local_range) const {
863
- queue_stream()->parallel_for_setup(input_dim, global_range, local_range);
864
- }
865
-
866
- /// This is used to prepare the number of threads and also the number of
867
- /// threads per block for sycl kernels
868
- template <typename Index>
869
- EIGEN_STRONG_INLINE void parallel_for_setup(
870
- const std::array<Index, 3> &input_dim, cl::sycl::range<3> &global_range,
871
- cl::sycl::range<3> &local_range) const {
872
- queue_stream()->parallel_for_setup(input_dim, global_range, local_range);
873
- }
874
-
875
- /// allocate device memory
876
- EIGEN_STRONG_INLINE void *allocate(size_t num_bytes) const {
877
- return queue_stream()->allocate(num_bytes);
878
- }
879
-
880
- EIGEN_STRONG_INLINE void *allocate_temp(size_t num_bytes) const {
881
- return queue_stream()->allocate_temp(num_bytes);
882
- }
883
-
884
- /// deallocate device memory
885
- EIGEN_STRONG_INLINE void deallocate(void *p) const {
886
- queue_stream()->deallocate(p);
887
- }
888
-
889
- EIGEN_STRONG_INLINE void deallocate_temp(void *buffer) const {
890
- queue_stream()->deallocate_temp(buffer);
891
- }
892
- template <cl::sycl::access::mode AcMd, typename T>
893
- EIGEN_STRONG_INLINE void deallocate_temp(
894
- const TensorSycl::internal::RangeAccess<AcMd, T> &buffer) const {
895
- queue_stream()->deallocate_temp(buffer);
896
- }
897
- EIGEN_STRONG_INLINE void deallocate_all() const {
898
- queue_stream()->deallocate_all();
899
- }
900
-
901
- template <typename data_t>
902
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE TensorSycl::internal::RangeAccess<
903
- cl::sycl::access::mode::read_write, data_t>
904
- get(data_t *data) const {
905
- return queue_stream()->get(data);
906
- }
907
- template <typename data_t>
908
- EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE data_t *get(
909
- TensorSycl::internal::RangeAccess<cl::sycl::access::mode::read_write,
910
- data_t>
911
- data) const {
912
- return queue_stream()->get(data);
913
- }
914
-
915
- /// attach existing buffer
916
- EIGEN_STRONG_INLINE void *attach_buffer(
917
- cl::sycl::buffer<buffer_scalar_t, 1> &buf) const {
918
- return queue_stream()->attach_buffer(buf);
919
- }
920
- /// detach buffer
921
- EIGEN_STRONG_INLINE void detach_buffer(void *p) const {
922
- queue_stream()->detach_buffer(p);
923
- }
924
- EIGEN_STRONG_INLINE ptrdiff_t get_offset(const void *ptr) const {
925
- return queue_stream()->get_offset(ptr);
926
- }
927
-
928
- // some runtime conditions that can be applied here
929
- EIGEN_STRONG_INLINE bool isDeviceSuitable() const { return true; }
930
-
931
- /// memcpyHostToDevice
932
- template <typename Index>
933
- EIGEN_STRONG_INLINE void memcpyHostToDevice(
934
- Index *dst, const Index *src, size_t n,
935
- std::function<void()> callback = {}) const {
936
- queue_stream()->memcpyHostToDevice(dst, src, n, callback);
937
- }
938
- /// memcpyDeviceToHost
939
- template <typename Index>
940
- EIGEN_STRONG_INLINE void memcpyDeviceToHost(
941
- void *dst, const Index *src, size_t n,
942
- std::function<void()> callback = {}) const {
943
- queue_stream()->memcpyDeviceToHost(dst, src, n, callback);
944
- }
945
- /// the memcpy function
946
- template <typename Index>
947
- EIGEN_STRONG_INLINE void memcpy(void *dst, const Index *src, size_t n) const {
948
- queue_stream()->memcpy(dst, src, n);
949
- }
950
- /// the memset function
951
- EIGEN_STRONG_INLINE void memset(void *data, int c, size_t n) const {
952
- queue_stream()->memset(data, c, n);
953
- }
954
- /// returning the sycl queue
955
- EIGEN_STRONG_INLINE cl::sycl::queue &sycl_queue() const {
956
- return queue_stream()->sycl_queue();
957
- }
958
- #ifdef EIGEN_SYCL_USE_PROGRAM_CLASS
959
- EIGEN_STRONG_INLINE cl::sycl::program &program() const {
960
- return queue_stream()->program();
961
- }
962
- #endif
963
-
964
- EIGEN_STRONG_INLINE size_t firstLevelCacheSize() const { return 48 * 1024; }
965
-
966
- EIGEN_STRONG_INLINE size_t lastLevelCacheSize() const {
967
- // We won't try to take advantage of the l2 cache for the time being, and
968
- // there is no l3 cache on sycl devices.
969
- return firstLevelCacheSize();
970
- }
971
- EIGEN_STRONG_INLINE unsigned long getNumSyclMultiProcessors() const {
972
- return queue_stream()->getNumSyclMultiProcessors();
973
- }
974
- EIGEN_STRONG_INLINE unsigned long maxSyclThreadsPerBlock() const {
975
- return queue_stream()->maxSyclThreadsPerBlock();
976
- }
977
- EIGEN_STRONG_INLINE cl::sycl::id<3> maxWorkItemSizes() const {
978
- return queue_stream()->maxWorkItemSizes();
979
- }
980
- EIGEN_STRONG_INLINE unsigned long maxSyclThreadsPerMultiProcessor() const {
981
- // OpenCL doesnot have such concept
982
- return queue_stream()->maxSyclThreadsPerMultiProcessor();
983
- }
984
- EIGEN_STRONG_INLINE size_t sharedMemPerBlock() const {
985
- return queue_stream()->sharedMemPerBlock();
986
- }
987
- EIGEN_STRONG_INLINE size_t getNearestPowerOfTwoWorkGroupSize() const {
988
- return queue_stream()->getNearestPowerOfTwoWorkGroupSize();
989
- }
990
-
991
- EIGEN_STRONG_INLINE size_t getPowerOfTwo(size_t val, bool roundUp) const {
992
- return queue_stream()->getPowerOfTwo(val, roundUp);
993
- }
994
- /// No need for sycl it should act the same as CPU version
995
- EIGEN_STRONG_INLINE int majorDeviceVersion() const {
996
- return queue_stream()->majorDeviceVersion();
997
- }
998
-
999
- EIGEN_STRONG_INLINE void synchronize() const {
1000
- queue_stream()->synchronize();
1001
- }
1002
- EIGEN_STRONG_INLINE void async_synchronize(
1003
- cl::sycl::event e = cl::sycl::event()) const {
1004
- queue_stream()->async_synchronize(e);
1005
- }
1006
- EIGEN_STRONG_INLINE cl::sycl::event get_latest_event() const {
1007
- return queue_stream()->get_latest_event();
1008
- }
1009
-
1010
- // This function checks if the runtime recorded an error for the
1011
- // underlying stream device.
1012
- EIGEN_STRONG_INLINE bool ok() const { return queue_stream()->ok(); }
1013
-
1014
- EIGEN_STRONG_INLINE bool has_local_memory() const {
1015
- return queue_stream()->has_local_memory();
1016
- }
1017
- EIGEN_STRONG_INLINE long max_buffer_size() const {
1018
- return queue_stream()->max_buffer_size();
1019
- }
1020
- EIGEN_STRONG_INLINE std::string getPlatformName() const {
1021
- return queue_stream()->getPlatformName();
1022
- }
1023
- EIGEN_STRONG_INLINE std::string getDeviceName() const {
1024
- return queue_stream()->getDeviceName();
1025
- }
1026
- EIGEN_STRONG_INLINE std::string getDeviceVendor() const {
1027
- return queue_stream()->getDeviceVendor();
1028
- }
1029
- template <typename OutScalar, typename KernelType, typename... T>
1030
- EIGEN_ALWAYS_INLINE void binary_kernel_launcher(T... var) const {
1031
- queue_stream()->template binary_kernel_launcher<OutScalar, KernelType>(
1032
- var...);
1033
- }
1034
- template <typename OutScalar, typename KernelType, typename... T>
1035
- EIGEN_ALWAYS_INLINE void unary_kernel_launcher(T... var) const {
1036
- queue_stream()->template unary_kernel_launcher<OutScalar, KernelType>(
1037
- var...);
1038
- }
1039
-
1040
- template <typename OutScalar, typename KernelType, typename... T>
1041
- EIGEN_ALWAYS_INLINE void nullary_kernel_launcher(T... var) const {
1042
- queue_stream()->template nullary_kernel_launcher<OutScalar, KernelType>(
1043
- var...);
1044
- }
1045
- };
1046
- } // end namespace Eigen
1047
-
1048
- #endif // EIGEN_CXX11_TENSOR_TENSOR_DEVICE_SYCL_H