scitex 2.5.0__py3-none-any.whl → 2.7.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1091) hide show
  1. scitex/__init__.py +19 -8
  2. scitex/__main__.py +2 -1
  3. scitex/__version__.py +1 -1
  4. scitex/_optional_deps.py +13 -20
  5. scitex/ai/__init__.py +5 -0
  6. scitex/ai/_gen_ai/_Anthropic.py +3 -1
  7. scitex/ai/_gen_ai/_BaseGenAI.py +3 -2
  8. scitex/ai/_gen_ai/_DeepSeek.py +1 -1
  9. scitex/ai/_gen_ai/_Google.py +3 -2
  10. scitex/ai/_gen_ai/_Llama.py +4 -2
  11. scitex/ai/_gen_ai/_OpenAI.py +3 -1
  12. scitex/ai/_gen_ai/_PARAMS.py +1 -0
  13. scitex/ai/_gen_ai/_Perplexity.py +3 -1
  14. scitex/ai/_gen_ai/__init__.py +1 -0
  15. scitex/ai/_gen_ai/_format_output_func.py +3 -1
  16. scitex/ai/classification/CrossValidationExperiment.py +8 -14
  17. scitex/ai/classification/examples/timeseries_cv_demo.py +128 -112
  18. scitex/ai/classification/reporters/_BaseClassificationReporter.py +2 -0
  19. scitex/ai/classification/reporters/_ClassificationReporter.py +30 -45
  20. scitex/ai/classification/reporters/_MultiClassificationReporter.py +8 -11
  21. scitex/ai/classification/reporters/_SingleClassificationReporter.py +126 -182
  22. scitex/ai/classification/reporters/__init__.py +1 -1
  23. scitex/ai/classification/reporters/reporter_utils/_Plotter.py +213 -119
  24. scitex/ai/classification/reporters/reporter_utils/__init__.py +28 -36
  25. scitex/ai/classification/reporters/reporter_utils/aggregation.py +125 -143
  26. scitex/ai/classification/reporters/reporter_utils/data_models.py +128 -120
  27. scitex/ai/classification/reporters/reporter_utils/reporting.py +507 -340
  28. scitex/ai/classification/reporters/reporter_utils/storage.py +4 -1
  29. scitex/ai/classification/reporters/reporter_utils/validation.py +141 -154
  30. scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +204 -129
  31. scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +215 -171
  32. scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +17 -17
  33. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +67 -143
  34. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +67 -143
  35. scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +12 -13
  36. scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +231 -144
  37. scitex/ai/classification/timeseries/__init__.py +2 -4
  38. scitex/ai/classification/timeseries/_normalize_timestamp.py +3 -0
  39. scitex/ai/clustering/_pca.py +0 -1
  40. scitex/ai/clustering/_umap.py +1 -2
  41. scitex/ai/feature_extraction/__init__.py +10 -8
  42. scitex/ai/feature_extraction/vit.py +0 -1
  43. scitex/ai/feature_selection/feature_selection.py +3 -8
  44. scitex/ai/metrics/_calc_conf_mat.py +2 -0
  45. scitex/ai/metrics/_calc_feature_importance.py +3 -7
  46. scitex/ai/metrics/_calc_pre_rec_auc.py +5 -5
  47. scitex/ai/metrics/_calc_roc_auc.py +4 -2
  48. scitex/ai/metrics/_calc_seizure_prediction_metrics.py +35 -20
  49. scitex/ai/metrics/_calc_silhouette_score.py +1 -3
  50. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +0 -3
  51. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +0 -3
  52. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +0 -3
  53. scitex/ai/optim/_optimizers.py +1 -1
  54. scitex/ai/plt/__init__.py +6 -1
  55. scitex/ai/plt/_plot_feature_importance.py +1 -3
  56. scitex/ai/plt/_plot_learning_curve.py +9 -24
  57. scitex/ai/plt/_plot_optuna_study.py +4 -3
  58. scitex/ai/plt/_plot_pre_rec_curve.py +9 -15
  59. scitex/ai/plt/_plot_roc_curve.py +6 -8
  60. scitex/ai/plt/_stx_conf_mat.py +121 -122
  61. scitex/ai/sampling/undersample.py +3 -2
  62. scitex/ai/sklearn/__init__.py +2 -2
  63. scitex/ai/training/_LearningCurveLogger.py +23 -10
  64. scitex/ai/utils/_check_params.py +0 -1
  65. scitex/benchmark/__init__.py +15 -25
  66. scitex/benchmark/benchmark.py +124 -117
  67. scitex/benchmark/monitor.py +117 -107
  68. scitex/benchmark/profiler.py +61 -58
  69. scitex/bridge/__init__.py +110 -0
  70. scitex/bridge/_helpers.py +149 -0
  71. scitex/bridge/_plt_vis.py +529 -0
  72. scitex/bridge/_protocol.py +283 -0
  73. scitex/bridge/_stats_plt.py +261 -0
  74. scitex/bridge/_stats_vis.py +265 -0
  75. scitex/browser/__init__.py +0 -2
  76. scitex/browser/auth/__init__.py +0 -0
  77. scitex/browser/auth/google.py +16 -11
  78. scitex/browser/automation/CookieHandler.py +2 -3
  79. scitex/browser/collaboration/__init__.py +3 -0
  80. scitex/browser/collaboration/auth_helpers.py +3 -1
  81. scitex/browser/collaboration/collaborative_agent.py +2 -0
  82. scitex/browser/collaboration/interactive_panel.py +2 -2
  83. scitex/browser/collaboration/shared_session.py +20 -11
  84. scitex/browser/collaboration/standard_interactions.py +1 -0
  85. scitex/browser/core/BrowserMixin.py +12 -30
  86. scitex/browser/core/ChromeProfileManager.py +9 -24
  87. scitex/browser/debugging/_browser_logger.py +15 -25
  88. scitex/browser/debugging/_failure_capture.py +9 -2
  89. scitex/browser/debugging/_highlight_element.py +15 -6
  90. scitex/browser/debugging/_show_grid.py +5 -6
  91. scitex/browser/debugging/_sync_session.py +4 -3
  92. scitex/browser/debugging/_test_monitor.py +14 -5
  93. scitex/browser/debugging/_visual_cursor.py +46 -35
  94. scitex/browser/interaction/click_center.py +4 -3
  95. scitex/browser/interaction/click_with_fallbacks.py +7 -10
  96. scitex/browser/interaction/close_popups.py +79 -66
  97. scitex/browser/interaction/fill_with_fallbacks.py +8 -8
  98. scitex/browser/pdf/__init__.py +3 -1
  99. scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +11 -10
  100. scitex/browser/pdf/detect_chrome_pdf_viewer.py +3 -6
  101. scitex/browser/remote/CaptchaHandler.py +109 -96
  102. scitex/browser/remote/ZenRowsAPIClient.py +91 -97
  103. scitex/browser/remote/ZenRowsBrowserManager.py +138 -112
  104. scitex/browser/stealth/HumanBehavior.py +4 -9
  105. scitex/browser/stealth/StealthManager.py +11 -26
  106. scitex/capture/__init__.py +17 -17
  107. scitex/capture/__main__.py +2 -3
  108. scitex/capture/capture.py +23 -51
  109. scitex/capture/cli.py +14 -39
  110. scitex/capture/gif.py +5 -9
  111. scitex/capture/mcp_server.py +7 -20
  112. scitex/capture/session.py +4 -3
  113. scitex/capture/utils.py +18 -53
  114. scitex/cli/__init__.py +1 -1
  115. scitex/cli/cloud.py +158 -116
  116. scitex/cli/config.py +224 -0
  117. scitex/cli/main.py +41 -40
  118. scitex/cli/scholar.py +60 -27
  119. scitex/cli/security.py +14 -20
  120. scitex/cli/web.py +87 -90
  121. scitex/cli/writer.py +51 -45
  122. scitex/cloud/__init__.py +14 -11
  123. scitex/cloud/_matplotlib_hook.py +6 -6
  124. scitex/config/README.md +313 -0
  125. scitex/config/{PriorityConfig.py → _PriorityConfig.py} +114 -17
  126. scitex/config/_ScitexConfig.py +319 -0
  127. scitex/config/__init__.py +41 -9
  128. scitex/config/_paths.py +325 -0
  129. scitex/config/default.yaml +81 -0
  130. scitex/context/_suppress_output.py +2 -3
  131. scitex/db/_BaseMixins/_BaseBackupMixin.py +3 -1
  132. scitex/db/_BaseMixins/_BaseBatchMixin.py +3 -1
  133. scitex/db/_BaseMixins/_BaseBlobMixin.py +3 -1
  134. scitex/db/_BaseMixins/_BaseImportExportMixin.py +1 -3
  135. scitex/db/_BaseMixins/_BaseIndexMixin.py +3 -1
  136. scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +1 -3
  137. scitex/db/_BaseMixins/_BaseQueryMixin.py +3 -1
  138. scitex/db/_BaseMixins/_BaseRowMixin.py +3 -1
  139. scitex/db/_BaseMixins/_BaseTableMixin.py +3 -1
  140. scitex/db/_BaseMixins/_BaseTransactionMixin.py +1 -3
  141. scitex/db/_BaseMixins/__init__.py +1 -1
  142. scitex/db/__init__.py +9 -1
  143. scitex/db/__main__.py +8 -21
  144. scitex/db/_check_health.py +15 -31
  145. scitex/db/_delete_duplicates.py +7 -4
  146. scitex/db/_inspect.py +22 -38
  147. scitex/db/_inspect_optimized.py +89 -85
  148. scitex/db/_postgresql/_PostgreSQL.py +0 -1
  149. scitex/db/_postgresql/_PostgreSQLMixins/_BlobMixin.py +3 -1
  150. scitex/db/_postgresql/_PostgreSQLMixins/_ConnectionMixin.py +1 -3
  151. scitex/db/_postgresql/_PostgreSQLMixins/_ImportExportMixin.py +1 -3
  152. scitex/db/_postgresql/_PostgreSQLMixins/_MaintenanceMixin.py +1 -4
  153. scitex/db/_postgresql/_PostgreSQLMixins/_QueryMixin.py +3 -3
  154. scitex/db/_postgresql/_PostgreSQLMixins/_RowMixin.py +3 -1
  155. scitex/db/_postgresql/_PostgreSQLMixins/_TransactionMixin.py +1 -3
  156. scitex/db/_postgresql/__init__.py +1 -1
  157. scitex/db/_sqlite3/_SQLite3.py +2 -4
  158. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +11 -12
  159. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +19 -14
  160. scitex/db/_sqlite3/_SQLite3Mixins/_BatchMixin.py +3 -1
  161. scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +7 -7
  162. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +118 -111
  163. scitex/db/_sqlite3/_SQLite3Mixins/_ConnectionMixin.py +8 -10
  164. scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +17 -45
  165. scitex/db/_sqlite3/_SQLite3Mixins/_ImportExportMixin.py +1 -3
  166. scitex/db/_sqlite3/_SQLite3Mixins/_IndexMixin.py +3 -1
  167. scitex/db/_sqlite3/_SQLite3Mixins/_QueryMixin.py +3 -4
  168. scitex/db/_sqlite3/_SQLite3Mixins/_RowMixin.py +9 -9
  169. scitex/db/_sqlite3/_SQLite3Mixins/_TableMixin.py +18 -11
  170. scitex/db/_sqlite3/_SQLite3Mixins/__init__.py +1 -0
  171. scitex/db/_sqlite3/__init__.py +1 -1
  172. scitex/db/_sqlite3/_delete_duplicates.py +13 -11
  173. scitex/decorators/__init__.py +29 -4
  174. scitex/decorators/_auto_order.py +43 -43
  175. scitex/decorators/_batch_fn.py +12 -6
  176. scitex/decorators/_cache_disk.py +8 -9
  177. scitex/decorators/_cache_disk_async.py +8 -7
  178. scitex/decorators/_combined.py +19 -13
  179. scitex/decorators/_converters.py +16 -3
  180. scitex/decorators/_deprecated.py +32 -22
  181. scitex/decorators/_numpy_fn.py +18 -4
  182. scitex/decorators/_pandas_fn.py +17 -5
  183. scitex/decorators/_signal_fn.py +17 -3
  184. scitex/decorators/_torch_fn.py +32 -15
  185. scitex/decorators/_xarray_fn.py +23 -9
  186. scitex/dev/_analyze_code_flow.py +0 -2
  187. scitex/dict/_DotDict.py +15 -19
  188. scitex/dict/_flatten.py +1 -0
  189. scitex/dict/_listed_dict.py +1 -0
  190. scitex/dict/_pop_keys.py +1 -0
  191. scitex/dict/_replace.py +1 -0
  192. scitex/dict/_safe_merge.py +1 -0
  193. scitex/dict/_to_str.py +2 -3
  194. scitex/dsp/__init__.py +13 -4
  195. scitex/dsp/_crop.py +3 -1
  196. scitex/dsp/_detect_ripples.py +3 -1
  197. scitex/dsp/_modulation_index.py +3 -1
  198. scitex/dsp/_time.py +3 -1
  199. scitex/dsp/_wavelet.py +0 -1
  200. scitex/dsp/example.py +0 -5
  201. scitex/dsp/filt.py +4 -0
  202. scitex/dsp/utils/__init__.py +4 -1
  203. scitex/dsp/utils/pac.py +3 -3
  204. scitex/dt/_normalize_timestamp.py +4 -1
  205. scitex/errors.py +3 -6
  206. scitex/etc/__init__.py +1 -1
  207. scitex/gen/_DimHandler.py +6 -6
  208. scitex/gen/__init__.py +5 -1
  209. scitex/gen/_deprecated_close.py +1 -0
  210. scitex/gen/_deprecated_start.py +5 -3
  211. scitex/gen/_detect_environment.py +44 -41
  212. scitex/gen/_detect_notebook_path.py +51 -47
  213. scitex/gen/_embed.py +1 -1
  214. scitex/gen/_get_notebook_path.py +81 -62
  215. scitex/gen/_inspect_module.py +0 -1
  216. scitex/gen/_norm.py +16 -7
  217. scitex/gen/_norm_cache.py +78 -65
  218. scitex/gen/_print_config.py +0 -3
  219. scitex/gen/_src.py +2 -3
  220. scitex/gen/_title_case.py +3 -2
  221. scitex/gen/_to_even.py +8 -8
  222. scitex/gen/_transpose.py +3 -3
  223. scitex/gen/misc.py +0 -3
  224. scitex/gists/_SigMacro_processFigure_S.py +2 -2
  225. scitex/gists/_SigMacro_toBlue.py +2 -2
  226. scitex/gists/__init__.py +4 -1
  227. scitex/git/_branch.py +19 -11
  228. scitex/git/_clone.py +23 -15
  229. scitex/git/_commit.py +10 -12
  230. scitex/git/_init.py +15 -38
  231. scitex/git/_remote.py +9 -3
  232. scitex/git/_result.py +3 -0
  233. scitex/git/_retry.py +2 -5
  234. scitex/git/_types.py +4 -0
  235. scitex/git/_validation.py +8 -8
  236. scitex/git/_workflow.py +4 -4
  237. scitex/io/__init__.py +2 -1
  238. scitex/io/_glob.py +2 -2
  239. scitex/io/_json2md.py +3 -3
  240. scitex/io/_load.py +6 -8
  241. scitex/io/_load_cache.py +71 -71
  242. scitex/io/_load_configs.py +2 -3
  243. scitex/io/_load_modules/_H5Explorer.py +6 -12
  244. scitex/io/_load_modules/_ZarrExplorer.py +3 -3
  245. scitex/io/_load_modules/_bibtex.py +62 -63
  246. scitex/io/_load_modules/_canvas.py +4 -9
  247. scitex/io/_load_modules/_catboost.py +7 -2
  248. scitex/io/_load_modules/_hdf5.py +2 -0
  249. scitex/io/_load_modules/_image.py +5 -1
  250. scitex/io/_load_modules/_matlab.py +3 -1
  251. scitex/io/_load_modules/_optuna.py +0 -1
  252. scitex/io/_load_modules/_pdf.py +38 -29
  253. scitex/io/_load_modules/_sqlite3.py +1 -0
  254. scitex/io/_load_modules/_txt.py +2 -0
  255. scitex/io/_load_modules/_xml.py +9 -9
  256. scitex/io/_load_modules/_zarr.py +12 -10
  257. scitex/io/_metadata.py +76 -37
  258. scitex/io/_qr_utils.py +18 -13
  259. scitex/io/_save.py +220 -63
  260. scitex/io/_save_modules/__init__.py +7 -2
  261. scitex/io/_save_modules/_bibtex.py +66 -61
  262. scitex/io/_save_modules/_canvas.py +5 -6
  263. scitex/io/_save_modules/_catboost.py +2 -2
  264. scitex/io/_save_modules/_csv.py +4 -4
  265. scitex/io/_save_modules/_excel.py +5 -9
  266. scitex/io/_save_modules/_hdf5.py +9 -21
  267. scitex/io/_save_modules/_html.py +5 -5
  268. scitex/io/_save_modules/_image.py +105 -8
  269. scitex/io/_save_modules/_joblib.py +2 -2
  270. scitex/io/_save_modules/_json.py +51 -6
  271. scitex/io/_save_modules/_listed_dfs_as_csv.py +2 -1
  272. scitex/io/_save_modules/_listed_scalars_as_csv.py +2 -1
  273. scitex/io/_save_modules/_matlab.py +2 -2
  274. scitex/io/_save_modules/_numpy.py +6 -8
  275. scitex/io/_save_modules/_pickle.py +4 -4
  276. scitex/io/_save_modules/_plotly.py +3 -3
  277. scitex/io/_save_modules/_tex.py +23 -25
  278. scitex/io/_save_modules/_text.py +2 -2
  279. scitex/io/_save_modules/_yaml.py +9 -9
  280. scitex/io/_save_modules/_zarr.py +15 -15
  281. scitex/io/utils/__init__.py +2 -1
  282. scitex/io/utils/h5_to_zarr.py +173 -155
  283. scitex/linalg/__init__.py +1 -1
  284. scitex/linalg/_geometric_median.py +4 -3
  285. scitex/logging/_Tee.py +5 -7
  286. scitex/logging/__init__.py +18 -19
  287. scitex/logging/_config.py +4 -1
  288. scitex/logging/_context.py +6 -5
  289. scitex/logging/_formatters.py +2 -3
  290. scitex/logging/_handlers.py +19 -20
  291. scitex/logging/_levels.py +9 -17
  292. scitex/logging/_logger.py +74 -15
  293. scitex/logging/_print_capture.py +17 -17
  294. scitex/nn/_BNet.py +1 -3
  295. scitex/nn/_Filters.py +6 -2
  296. scitex/nn/_ModulationIndex.py +3 -1
  297. scitex/nn/_PAC.py +3 -2
  298. scitex/nn/_PSD.py +0 -1
  299. scitex/nn/__init__.py +16 -3
  300. scitex/path/_clean.py +10 -8
  301. scitex/path/_find.py +1 -1
  302. scitex/path/_get_spath.py +1 -2
  303. scitex/path/_mk_spath.py +1 -1
  304. scitex/path/_symlink.py +5 -10
  305. scitex/pd/__init__.py +4 -1
  306. scitex/pd/_force_df.py +24 -24
  307. scitex/pd/_get_unique.py +1 -0
  308. scitex/pd/_merge_columns.py +1 -1
  309. scitex/pd/_round.py +11 -7
  310. scitex/pd/_to_xy.py +0 -1
  311. scitex/plt/REQUESTS.md +191 -0
  312. scitex/plt/__init__.py +185 -87
  313. scitex/plt/_subplots/_AxesWrapper.py +22 -6
  314. scitex/plt/_subplots/_AxisWrapper.py +100 -39
  315. scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +74 -52
  316. scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +183 -73
  317. scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +61 -45
  318. scitex/plt/_subplots/_AxisWrapperMixins/_TrackingMixin.py +26 -14
  319. scitex/plt/_subplots/_AxisWrapperMixins/_UnitAwareMixin.py +80 -73
  320. scitex/plt/_subplots/_FigWrapper.py +93 -60
  321. scitex/plt/_subplots/_SubplotsWrapper.py +135 -68
  322. scitex/plt/_subplots/__init__.py +10 -0
  323. scitex/plt/_subplots/_export_as_csv.py +89 -47
  324. scitex/plt/_subplots/_export_as_csv_formatters/__init__.py +1 -0
  325. scitex/plt/_subplots/_export_as_csv_formatters/_format_annotate.py +6 -4
  326. scitex/plt/_subplots/_export_as_csv_formatters/_format_bar.py +88 -38
  327. scitex/plt/_subplots/_export_as_csv_formatters/_format_barh.py +25 -31
  328. scitex/plt/_subplots/_export_as_csv_formatters/_format_boxplot.py +53 -23
  329. scitex/plt/_subplots/_export_as_csv_formatters/_format_contour.py +38 -25
  330. scitex/plt/_subplots/_export_as_csv_formatters/_format_contourf.py +17 -9
  331. scitex/plt/_subplots/_export_as_csv_formatters/_format_errorbar.py +70 -124
  332. scitex/plt/_subplots/_export_as_csv_formatters/_format_eventplot.py +12 -10
  333. scitex/plt/_subplots/_export_as_csv_formatters/_format_fill.py +31 -17
  334. scitex/plt/_subplots/_export_as_csv_formatters/_format_fill_between.py +33 -21
  335. scitex/plt/_subplots/_export_as_csv_formatters/_format_hexbin.py +14 -4
  336. scitex/plt/_subplots/_export_as_csv_formatters/_format_hist.py +43 -29
  337. scitex/plt/_subplots/_export_as_csv_formatters/_format_hist2d.py +14 -4
  338. scitex/plt/_subplots/_export_as_csv_formatters/_format_imshow.py +27 -11
  339. scitex/plt/_subplots/_export_as_csv_formatters/_format_imshow2d.py +7 -5
  340. scitex/plt/_subplots/_export_as_csv_formatters/_format_matshow.py +9 -7
  341. scitex/plt/_subplots/_export_as_csv_formatters/_format_pie.py +15 -6
  342. scitex/plt/_subplots/_export_as_csv_formatters/_format_plot.py +85 -46
  343. scitex/plt/_subplots/_export_as_csv_formatters/_format_plot_box.py +52 -27
  344. scitex/plt/_subplots/_export_as_csv_formatters/_format_plot_imshow.py +1 -0
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  891. scitex/scholar/url_finder/translators/individual/sciencedirect.py +36 -17
  892. scitex/scholar/url_finder/translators/individual/semantics_visual_library.py +3 -1
  893. scitex/scholar/url_finder/translators/individual/silverchair.py +70 -52
  894. scitex/scholar/url_finder/translators/individual/sora.py +3 -1
  895. scitex/scholar/url_finder/translators/individual/springer.py +15 -11
  896. scitex/scholar/url_finder/translators/individual/ssrn.py +3 -3
  897. scitex/scholar/url_finder/translators/individual/stanford_encyclopedia_of_philosophy.py +3 -1
  898. scitex/scholar/url_finder/translators/individual/superlib.py +3 -1
  899. scitex/scholar/url_finder/translators/individual/treesearch.py +3 -1
  900. scitex/scholar/url_finder/translators/individual/university_of_chicago_press_books.py +3 -1
  901. scitex/scholar/url_finder/translators/individual/vlex.py +3 -1
  902. scitex/scholar/url_finder/translators/individual/web_of_science.py +3 -1
  903. scitex/scholar/url_finder/translators/individual/web_of_science_nextgen.py +3 -1
  904. scitex/scholar/url_finder/translators/individual/wiley.py +31 -25
  905. scitex/scholar/url_finder/translators/individual/wilson_center_digital_archive.py +3 -1
  906. scitex/scholar/utils/bibtex/_parse_bibtex.py +3 -3
  907. scitex/scholar/utils/cleanup/_cleanup_scholar_processes.py +5 -9
  908. scitex/scholar/utils/text/_TextNormalizer.py +249 -176
  909. scitex/scholar/utils/validation/DOIValidator.py +31 -28
  910. scitex/scholar/utils/validation/__init__.py +0 -0
  911. scitex/scholar/utils/validation/validate_library_dois.py +61 -57
  912. scitex/scholar/zotero/__init__.py +1 -1
  913. scitex/security/cli.py +7 -20
  914. scitex/security/github.py +45 -32
  915. scitex/session/__init__.py +8 -9
  916. scitex/session/_decorator.py +49 -42
  917. scitex/session/_lifecycle.py +39 -39
  918. scitex/session/_manager.py +24 -20
  919. scitex/sh/__init__.py +4 -3
  920. scitex/sh/_execute.py +10 -7
  921. scitex/sh/_security.py +3 -3
  922. scitex/sh/_types.py +2 -3
  923. scitex/stats/__init__.py +57 -6
  924. scitex/stats/_schema.py +42 -569
  925. scitex/stats/auto/__init__.py +188 -0
  926. scitex/stats/auto/_context.py +331 -0
  927. scitex/stats/auto/_formatting.py +679 -0
  928. scitex/stats/auto/_rules.py +901 -0
  929. scitex/stats/auto/_selector.py +554 -0
  930. scitex/stats/auto/_styles.py +721 -0
  931. scitex/stats/correct/__init__.py +4 -4
  932. scitex/stats/correct/_correct_bonferroni.py +43 -34
  933. scitex/stats/correct/_correct_fdr.py +14 -40
  934. scitex/stats/correct/_correct_fdr_.py +39 -46
  935. scitex/stats/correct/_correct_holm.py +14 -32
  936. scitex/stats/correct/_correct_sidak.py +36 -21
  937. scitex/stats/descriptive/_circular.py +20 -21
  938. scitex/stats/descriptive/_describe.py +19 -5
  939. scitex/stats/descriptive/_nan.py +5 -7
  940. scitex/stats/descriptive/_real.py +4 -3
  941. scitex/stats/effect_sizes/__init__.py +10 -11
  942. scitex/stats/effect_sizes/_cliffs_delta.py +35 -32
  943. scitex/stats/effect_sizes/_cohens_d.py +30 -31
  944. scitex/stats/effect_sizes/_epsilon_squared.py +19 -22
  945. scitex/stats/effect_sizes/_eta_squared.py +23 -27
  946. scitex/stats/effect_sizes/_prob_superiority.py +18 -21
  947. scitex/stats/posthoc/__init__.py +3 -3
  948. scitex/stats/posthoc/_dunnett.py +75 -55
  949. scitex/stats/posthoc/_games_howell.py +61 -43
  950. scitex/stats/posthoc/_tukey_hsd.py +42 -34
  951. scitex/stats/power/__init__.py +2 -2
  952. scitex/stats/power/_power.py +56 -56
  953. scitex/stats/tests/__init__.py +1 -1
  954. scitex/stats/tests/correlation/__init__.py +1 -1
  955. scitex/stats/tests/correlation/_test_pearson.py +28 -38
  956. scitex/stats/utils/__init__.py +14 -17
  957. scitex/stats/utils/_effect_size.py +85 -78
  958. scitex/stats/utils/_formatters.py +49 -43
  959. scitex/stats/utils/_normalizers.py +7 -14
  960. scitex/stats/utils/_power.py +56 -56
  961. scitex/str/__init__.py +1 -0
  962. scitex/str/_clean_path.py +3 -3
  963. scitex/str/_factor_out_digits.py +86 -58
  964. scitex/str/_format_plot_text.py +180 -111
  965. scitex/str/_latex.py +19 -19
  966. scitex/str/_latex_fallback.py +9 -10
  967. scitex/str/_parse.py +3 -6
  968. scitex/str/_print_debug.py +13 -13
  969. scitex/str/_printc.py +2 -0
  970. scitex/str/_search.py +3 -3
  971. scitex/template/.legacy/_clone_project.py +9 -13
  972. scitex/template/__init__.py +10 -2
  973. scitex/template/_clone_project.py +7 -2
  974. scitex/template/_copy.py +1 -0
  975. scitex/template/_customize.py +3 -6
  976. scitex/template/_git_strategy.py +2 -3
  977. scitex/template/_rename.py +1 -0
  978. scitex/template/clone_pip_project.py +6 -7
  979. scitex/template/clone_research.py +7 -10
  980. scitex/template/clone_singularity.py +6 -7
  981. scitex/template/clone_writer_directory.py +6 -7
  982. scitex/tex/_preview.py +26 -11
  983. scitex/tex/_to_vec.py +10 -7
  984. scitex/torch/__init__.py +11 -1
  985. scitex/types/_ArrayLike.py +2 -0
  986. scitex/types/_is_listed_X.py +3 -3
  987. scitex/units.py +110 -77
  988. scitex/utils/_compress_hdf5.py +3 -3
  989. scitex/utils/_email.py +8 -4
  990. scitex/utils/_notify.py +14 -8
  991. scitex/utils/_search.py +6 -6
  992. scitex/utils/_verify_scitex_format.py +17 -42
  993. scitex/utils/_verify_scitex_format_v01.py +12 -34
  994. scitex/utils/template.py +4 -3
  995. scitex/vis/__init__.py +0 -0
  996. scitex/vis/backend/__init__.py +3 -3
  997. scitex/vis/backend/{export.py → _export.py} +1 -1
  998. scitex/vis/backend/{parser.py → _parser.py} +1 -3
  999. scitex/vis/backend/{render.py → _render.py} +1 -1
  1000. scitex/vis/canvas.py +15 -3
  1001. scitex/vis/editor/__init__.py +0 -0
  1002. scitex/vis/editor/_dearpygui_editor.py +450 -304
  1003. scitex/vis/editor/_defaults.py +114 -123
  1004. scitex/vis/editor/_edit.py +38 -26
  1005. scitex/vis/editor/_flask_editor.py +8 -8
  1006. scitex/vis/editor/_mpl_editor.py +63 -48
  1007. scitex/vis/editor/_qt_editor.py +210 -159
  1008. scitex/vis/editor/_tkinter_editor.py +146 -89
  1009. scitex/vis/editor/flask_editor/__init__.py +10 -10
  1010. scitex/vis/editor/flask_editor/_bbox.py +529 -0
  1011. scitex/vis/editor/flask_editor/{core.py → _core.py} +45 -29
  1012. scitex/vis/editor/flask_editor/_plotter.py +567 -0
  1013. scitex/vis/editor/flask_editor/_renderer.py +393 -0
  1014. scitex/vis/editor/flask_editor/{utils.py → _utils.py} +13 -14
  1015. scitex/vis/editor/flask_editor/templates/__init__.py +5 -5
  1016. scitex/vis/editor/flask_editor/templates/{html.py → _html.py} +234 -16
  1017. scitex/vis/editor/flask_editor/templates/_scripts.py +1261 -0
  1018. scitex/vis/editor/flask_editor/templates/{styles.py → _styles.py} +192 -2
  1019. scitex/vis/io/__init__.py +5 -5
  1020. scitex/vis/io/{canvas.py → _canvas.py} +8 -4
  1021. scitex/vis/io/{data.py → _data.py} +13 -9
  1022. scitex/vis/io/{directory.py → _directory.py} +7 -4
  1023. scitex/vis/io/{export.py → _export.py} +15 -12
  1024. scitex/vis/io/{load.py → _load.py} +1 -1
  1025. scitex/vis/io/{panel.py → _panel.py} +21 -13
  1026. scitex/vis/io/{save.py → _save.py} +0 -0
  1027. scitex/vis/model/__init__.py +7 -7
  1028. scitex/vis/model/{annotations.py → _annotations.py} +2 -4
  1029. scitex/vis/model/{axes.py → _axes.py} +1 -1
  1030. scitex/vis/model/{figure.py → _figure.py} +0 -0
  1031. scitex/vis/model/{guides.py → _guides.py} +1 -1
  1032. scitex/vis/model/{plot.py → _plot.py} +2 -4
  1033. scitex/vis/model/{plot_types.py → _plot_types.py} +0 -0
  1034. scitex/vis/model/{styles.py → _styles.py} +0 -0
  1035. scitex/vis/utils/__init__.py +2 -2
  1036. scitex/vis/utils/{defaults.py → _defaults.py} +1 -2
  1037. scitex/vis/utils/{validate.py → _validate.py} +3 -9
  1038. scitex/web/__init__.py +7 -1
  1039. scitex/web/_scraping.py +54 -38
  1040. scitex/web/_search_pubmed.py +30 -14
  1041. scitex/writer/.legacy/Writer_v01-refactored.py +4 -4
  1042. scitex/writer/.legacy/_compile.py +18 -28
  1043. scitex/writer/Writer.py +8 -21
  1044. scitex/writer/__init__.py +11 -11
  1045. scitex/writer/_clone_writer_project.py +2 -6
  1046. scitex/writer/_compile/__init__.py +1 -0
  1047. scitex/writer/_compile/_parser.py +1 -0
  1048. scitex/writer/_compile/_runner.py +35 -38
  1049. scitex/writer/_compile/_validator.py +1 -0
  1050. scitex/writer/_compile/manuscript.py +1 -0
  1051. scitex/writer/_compile/revision.py +1 -0
  1052. scitex/writer/_compile/supplementary.py +1 -0
  1053. scitex/writer/_compile_async.py +5 -12
  1054. scitex/writer/_project/__init__.py +1 -0
  1055. scitex/writer/_project/_create.py +10 -25
  1056. scitex/writer/_project/_trees.py +4 -9
  1057. scitex/writer/_project/_validate.py +2 -3
  1058. scitex/writer/_validate_tree_structures.py +7 -18
  1059. scitex/writer/dataclasses/__init__.py +8 -10
  1060. scitex/writer/dataclasses/config/_CONSTANTS.py +2 -3
  1061. scitex/writer/dataclasses/config/_WriterConfig.py +4 -9
  1062. scitex/writer/dataclasses/contents/_ManuscriptContents.py +14 -25
  1063. scitex/writer/dataclasses/contents/_RevisionContents.py +21 -16
  1064. scitex/writer/dataclasses/contents/_SupplementaryContents.py +21 -24
  1065. scitex/writer/dataclasses/core/_Document.py +2 -3
  1066. scitex/writer/dataclasses/core/_DocumentSection.py +8 -23
  1067. scitex/writer/dataclasses/results/_CompilationResult.py +2 -3
  1068. scitex/writer/dataclasses/results/_LaTeXIssue.py +3 -6
  1069. scitex/writer/dataclasses/results/_SaveSectionsResponse.py +20 -9
  1070. scitex/writer/dataclasses/results/_SectionReadResponse.py +24 -10
  1071. scitex/writer/dataclasses/tree/_ConfigTree.py +7 -4
  1072. scitex/writer/dataclasses/tree/_ManuscriptTree.py +10 -13
  1073. scitex/writer/dataclasses/tree/_RevisionTree.py +16 -17
  1074. scitex/writer/dataclasses/tree/_ScriptsTree.py +10 -5
  1075. scitex/writer/dataclasses/tree/_SharedTree.py +10 -13
  1076. scitex/writer/dataclasses/tree/_SupplementaryTree.py +15 -14
  1077. scitex/writer/utils/.legacy_git_retry.py +3 -8
  1078. scitex/writer/utils/_parse_latex_logs.py +2 -3
  1079. scitex/writer/utils/_parse_script_args.py +20 -23
  1080. scitex/writer/utils/_watch.py +5 -5
  1081. {scitex-2.5.0.dist-info → scitex-2.7.0.dist-info}/METADATA +4 -10
  1082. {scitex-2.5.0.dist-info → scitex-2.7.0.dist-info}/RECORD +1071 -975
  1083. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +0 -583
  1084. scitex/plt/_subplots/_export_as_csv_formatters.py +0 -112
  1085. scitex/vis/editor/flask_editor/bbox.py +0 -216
  1086. scitex/vis/editor/flask_editor/plotter.py +0 -130
  1087. scitex/vis/editor/flask_editor/renderer.py +0 -184
  1088. scitex/vis/editor/flask_editor/templates/scripts.py +0 -614
  1089. {scitex-2.5.0.dist-info → scitex-2.7.0.dist-info}/WHEEL +0 -0
  1090. {scitex-2.5.0.dist-info → scitex-2.7.0.dist-info}/entry_points.txt +0 -0
  1091. {scitex-2.5.0.dist-info → scitex-2.7.0.dist-info}/licenses/LICENSE +0 -0
@@ -34,12 +34,12 @@ class CurrentAffairsTranslator:
34
34
  "inRepository": True,
35
35
  "translatorType": 4,
36
36
  "browserSupport": "gcsibv",
37
- "lastUpdated": "2021-08-07 00:42:35"
37
+ "lastUpdated": "2021-08-07 00:42:35",
38
38
  }
39
39
 
40
40
  def detect_web(self, doc: BeautifulSoup, url: str) -> str:
41
41
  """Detect if the page is a magazine article."""
42
- if doc.select_one('h1.title') and doc.select_one('.primary'):
42
+ if doc.select_one("h1.title") and doc.select_one(".primary"):
43
43
  return "magazineArticle"
44
44
  return ""
45
45
 
@@ -52,50 +52,48 @@ class CurrentAffairsTranslator:
52
52
  def scrape(self, doc: BeautifulSoup, url: str) -> Dict[str, Any]:
53
53
  """Scrape article data from the document."""
54
54
  item = {
55
- 'itemType': 'magazineArticle',
56
- 'publicationTitle': 'Current Affairs',
57
- 'language': 'en',
58
- 'ISSN': '2471-2647',
59
- 'url': re.sub(r'[#?].*$', '', url), # Remove query params and anchors
60
- 'creators': [],
61
- 'tags': [],
62
- 'attachments': []
55
+ "itemType": "magazineArticle",
56
+ "publicationTitle": "Current Affairs",
57
+ "language": "en",
58
+ "ISSN": "2471-2647",
59
+ "url": re.sub(r"[#?].*$", "", url), # Remove query params and anchors
60
+ "creators": [],
61
+ "tags": [],
62
+ "attachments": [],
63
63
  }
64
64
 
65
65
  # Extract title
66
- title_elem = doc.select_one('h1.title')
66
+ title_elem = doc.select_one("h1.title")
67
67
  if title_elem:
68
- item['title'] = title_elem.get_text(strip=True)
68
+ item["title"] = title_elem.get_text(strip=True)
69
69
 
70
70
  # Extract abstract from meta description
71
- description_meta = doc.find('meta', {'name': 'description'})
72
- if description_meta and description_meta.get('content'):
73
- item['abstractNote'] = description_meta['content']
71
+ description_meta = doc.find("meta", {"name": "description"})
72
+ if description_meta and description_meta.get("content"):
73
+ item["abstractNote"] = description_meta["content"]
74
74
 
75
75
  # Extract issue
76
- issue_input = doc.select_one('#wpIssueName')
77
- if issue_input and issue_input.get('value'):
78
- item['issue'] = issue_input['value']
76
+ issue_input = doc.select_one("#wpIssueName")
77
+ if issue_input and issue_input.get("value"):
78
+ item["issue"] = issue_input["value"]
79
79
 
80
80
  # Extract date from dateline
81
- dateline_elem = doc.select_one('.dateline span')
81
+ dateline_elem = doc.select_one(".dateline span")
82
82
  if dateline_elem:
83
83
  date_text = dateline_elem.get_text(strip=True)
84
84
  # Convert to ISO format if possible
85
- item['date'] = date_text
85
+ item["date"] = date_text
86
86
 
87
87
  # Extract authors from bylines
88
- for byline in doc.select('.primary .bylines li'):
88
+ for byline in doc.select(".primary .bylines li"):
89
89
  author_name = byline.get_text(strip=True)
90
90
  if author_name:
91
- item['creators'].append(self._clean_author(author_name, 'author'))
91
+ item["creators"].append(self._clean_author(author_name, "author"))
92
92
 
93
93
  # Add snapshot attachment
94
- item['attachments'].append({
95
- 'title': 'Snapshot',
96
- 'mimeType': 'text/html',
97
- 'url': url
98
- })
94
+ item["attachments"].append(
95
+ {"title": "Snapshot", "mimeType": "text/html", "url": url}
96
+ )
99
97
 
100
98
  return item
101
99
 
@@ -106,13 +104,9 @@ class CurrentAffairsTranslator:
106
104
 
107
105
  if len(parts) >= 2:
108
106
  return {
109
- 'firstName': ' '.join(parts[:-1]),
110
- 'lastName': parts[-1],
111
- 'creatorType': creator_type
107
+ "firstName": " ".join(parts[:-1]),
108
+ "lastName": parts[-1],
109
+ "creatorType": creator_type,
112
110
  }
113
111
  else:
114
- return {
115
- 'lastName': name,
116
- 'creatorType': creator_type,
117
- 'fieldMode': True
118
- }
112
+ return {"lastName": name, "creatorType": creator_type, "fieldMode": True}
@@ -34,7 +34,7 @@ class DABITranslator:
34
34
  "inRepository": True,
35
35
  "translatorType": 4,
36
36
  "browserSupport": "gcsibv",
37
- "lastUpdated": "2021-09-10 18:58:10"
37
+ "lastUpdated": "2021-09-10 18:58:10",
38
38
  }
39
39
 
40
40
  def detect_web(self, doc: BeautifulSoup, url: str) -> str:
@@ -42,27 +42,29 @@ class DABITranslator:
42
42
  if "/vollanzeige.pl?" in url:
43
43
  return "journalArticle"
44
44
  elif "/suche.pl?" in url and self._get_search_results(doc, True):
45
- return 'multiple'
45
+ return "multiple"
46
46
  return ""
47
47
 
48
- def _get_search_results(self, doc: BeautifulSoup, check_only: bool = False) -> Dict[str, str]:
48
+ def _get_search_results(
49
+ self, doc: BeautifulSoup, check_only: bool = False
50
+ ) -> Dict[str, str]:
49
51
  """Get search results from the page."""
50
52
  items = {}
51
53
  found = False
52
- rows = doc.find_all('tr')[1:] # Skip header row
54
+ rows = doc.find_all("tr")[1:] # Skip header row
53
55
 
54
56
  for row in rows:
55
- tds = row.find_all('td')
57
+ tds = row.find_all("td")
56
58
  if len(tds) < 3:
57
59
  continue
58
60
 
59
- link = tds[0].find('a')
61
+ link = tds[0].find("a")
60
62
  if not link:
61
63
  continue
62
64
 
63
- url = link.get('href')
65
+ url = link.get("href")
64
66
  author = tds[1].get_text(strip=True)
65
- title = tds[2].get_text(strip=True).replace('<br>', '. ')
67
+ title = tds[2].get_text(strip=True).replace("<br>", ". ")
66
68
 
67
69
  if author:
68
70
  item_text = f"{title} ({re.sub(r';.*', ' et al.', author)})"
@@ -88,114 +90,116 @@ class DABITranslator:
88
90
  def scrape(self, doc: BeautifulSoup, url: str) -> Dict[str, Any]:
89
91
  """Scrape article data from the document."""
90
92
  item = {
91
- 'itemType': 'journalArticle',
92
- 'creators': [],
93
- 'tags': [],
94
- 'attachments': []
93
+ "itemType": "journalArticle",
94
+ "creators": [],
95
+ "tags": [],
96
+ "attachments": [],
95
97
  }
96
98
 
97
99
  # Parse table rows for metadata
98
100
  data = {}
99
- rows = doc.find_all('tr')
101
+ rows = doc.find_all("tr")
100
102
 
101
103
  for row in rows:
102
- headers = row.find_all('th')
103
- contents = row.find_all('td')
104
+ headers = row.find_all("th")
105
+ contents = row.find_all("td")
104
106
 
105
107
  if headers and contents:
106
- header = headers[0].get_text(strip=True).replace(' ', '')
108
+ header = headers[0].get_text(strip=True).replace(" ", "")
107
109
  content_html = str(contents[0])
108
110
  data[header] = content_html.strip()
109
111
 
110
112
  # Set URL to fulltext resource if present
111
- if 'URL' in data:
112
- url_match = re.search(r'<a.*?href="(.*?)"', data['URL'])
113
+ if "URL" in data:
114
+ url_match = re.search(r'<a.*?href="(.*?)"', data["URL"])
113
115
  if url_match:
114
116
  url_value = url_match.group(1)
115
117
 
116
- if re.search(r'\.pdf(#.*)?$', url_value):
117
- item['attachments'].append({
118
- 'url': url_value,
119
- 'title': 'DABI Full Text PDF',
120
- 'mimeType': 'application/pdf'
121
- })
118
+ if re.search(r"\.pdf(#.*)?$", url_value):
119
+ item["attachments"].append(
120
+ {
121
+ "url": url_value,
122
+ "title": "DABI Full Text PDF",
123
+ "mimeType": "application/pdf",
124
+ }
125
+ )
122
126
  else:
123
- item['url'] = url_value
127
+ item["url"] = url_value
124
128
 
125
129
  # Handle title fields
126
- if 'Titel' not in data and 'Untertitel' in data:
127
- data['Titel'] = data['Untertitel']
128
- del data['Untertitel']
130
+ if "Titel" not in data and "Untertitel" in data:
131
+ data["Titel"] = data["Untertitel"]
132
+ del data["Untertitel"]
129
133
 
130
- if 'Titel' in data:
131
- item['title'] = data['Titel'].replace('*', '')
134
+ if "Titel" in data:
135
+ item["title"] = data["Titel"].replace("*", "")
132
136
 
133
- if 'Untertitel' in data:
134
- subtitle = data['Untertitel']
135
- if re.search(r'(\?|!|\.)\W?$', item['title']):
136
- item['title'] += " " + subtitle
137
+ if "Untertitel" in data:
138
+ subtitle = data["Untertitel"]
139
+ if re.search(r"(\?|!|\.)\W?$", item["title"]):
140
+ item["title"] += " " + subtitle
137
141
  else:
138
- item['title'] += ": " + subtitle
142
+ item["title"] += ": " + subtitle
139
143
 
140
144
  # Parse authors
141
- if 'Autoren' in data:
142
- authors = data['Autoren'].split('; ')
145
+ if "Autoren" in data:
146
+ authors = data["Autoren"].split("; ")
143
147
  for author in authors:
144
- item['creators'].append(self._clean_author(author, "author"))
148
+ item["creators"].append(self._clean_author(author, "author"))
145
149
 
146
150
  # Parse pages
147
- if 'Anfangsseite' in data and int(data.get('Anfangsseite', 0)) > 0:
148
- start_page = data['Anfangsseite']
149
- end_page = data.get('Endseite', '')
151
+ if "Anfangsseite" in data and int(data.get("Anfangsseite", 0)) > 0:
152
+ start_page = data["Anfangsseite"]
153
+ end_page = data.get("Endseite", "")
150
154
  if end_page and int(end_page) > int(start_page):
151
- item['pages'] = f"{start_page}-{end_page}"
155
+ item["pages"] = f"{start_page}-{end_page}"
152
156
  else:
153
- item['pages'] = start_page
157
+ item["pages"] = start_page
154
158
 
155
159
  # Parse tags
156
- if 'Schlagwörter' in data:
157
- tags = data['Schlagwörter'].split('; ')
158
- item['tags'] = [{'tag': tag} for tag in tags if tag]
160
+ if "Schlagwörter" in data:
161
+ tags = data["Schlagwörter"].split("; ")
162
+ item["tags"] = [{"tag": tag} for tag in tags if tag]
159
163
 
160
164
  # Clean publication title
161
- if 'Zeitschrift' in data:
162
- item['publicationTitle'] = data['Zeitschrift'].replace(' : ', ': ')
165
+ if "Zeitschrift" in data:
166
+ item["publicationTitle"] = data["Zeitschrift"].replace(" : ", ": ")
163
167
 
164
168
  # Other fields
165
- if 'Jahr' in data:
166
- item['date'] = data['Jahr']
167
- if 'Heft' in data:
168
- item['issue'] = data['Heft']
169
- if 'Band' in data:
170
- item['volume'] = data['Band']
171
- if 'Abstract' in data:
172
- item['abstractNote'] = data['Abstract']
169
+ if "Jahr" in data:
170
+ item["date"] = data["Jahr"]
171
+ if "Heft" in data:
172
+ item["issue"] = data["Heft"]
173
+ if "Band" in data:
174
+ item["volume"] = data["Band"]
175
+ if "Abstract" in data:
176
+ item["abstractNote"] = data["Abstract"]
173
177
 
174
178
  return item
175
179
 
176
180
  def _clean_author(self, name: str, creator_type: str) -> Dict[str, Any]:
177
181
  """Parse author name into first and last name."""
178
182
  name = name.strip()
179
- parts = name.split(',')
183
+ parts = name.split(",")
180
184
 
181
185
  if len(parts) >= 2:
182
186
  # Format: "Last, First"
183
187
  return {
184
- 'firstName': parts[1].strip(),
185
- 'lastName': parts[0].strip(),
186
- 'creatorType': creator_type
188
+ "firstName": parts[1].strip(),
189
+ "lastName": parts[0].strip(),
190
+ "creatorType": creator_type,
187
191
  }
188
192
  else:
189
193
  parts = name.split()
190
194
  if len(parts) >= 2:
191
195
  return {
192
- 'firstName': ' '.join(parts[:-1]),
193
- 'lastName': parts[-1],
194
- 'creatorType': creator_type
196
+ "firstName": " ".join(parts[:-1]),
197
+ "lastName": parts[-1],
198
+ "creatorType": creator_type,
195
199
  }
196
200
  else:
197
201
  return {
198
- 'lastName': name,
199
- 'creatorType': creator_type,
200
- 'fieldMode': True
202
+ "lastName": name,
203
+ "creatorType": creator_type,
204
+ "fieldMode": True,
201
205
  }
@@ -12,7 +12,9 @@ class DagensNyheterTranslator(BaseTranslator):
12
12
  """Dagens Nyheter."""
13
13
 
14
14
  LABEL = "Dagens Nyheter"
15
- URL_TARGET_PATTERN = r"^https?://www\.dn\.se/(nyheter|ekonomi|kultur-noje|sport|sok)/"
15
+ URL_TARGET_PATTERN = (
16
+ r"^https?://www\.dn\.se/(nyheter|ekonomi|kultur-noje|sport|sok)/"
17
+ )
16
18
 
17
19
  @classmethod
18
20
  def matches_url(cls, url: str) -> bool:
@@ -30,7 +30,7 @@ class DagstuhlTranslator:
30
30
  "priority": 100,
31
31
  "inRepository": True,
32
32
  "translatorType": 4, # Web
33
- "lastUpdated": "2024-11-30 08:38:44"
33
+ "lastUpdated": "2024-11-30 08:38:44",
34
34
  }
35
35
 
36
36
  def detect_web(self, doc, url: str) -> Optional[str]:
@@ -99,17 +99,16 @@ class DagstuhlTranslator:
99
99
  # Add PDF attachment if available
100
100
  pdf_url = self._get_pdf_url(doc)
101
101
  if pdf_url:
102
- item["attachments"].append({
103
- "url": pdf_url,
104
- "title": "Full Text PDF",
105
- "mimeType": "application/pdf"
106
- })
102
+ item["attachments"].append(
103
+ {
104
+ "url": pdf_url,
105
+ "title": "Full Text PDF",
106
+ "mimeType": "application/pdf",
107
+ }
108
+ )
107
109
 
108
110
  # Add snapshot
109
- item["attachments"].append({
110
- "title": "Snapshot",
111
- "mimeType": "text/html"
112
- })
111
+ item["attachments"].append({"title": "Snapshot", "mimeType": "text/html"})
113
112
 
114
113
  item["libraryCatalog"] = "Dagstuhl Research Online Publication Server"
115
114
 
@@ -140,11 +139,7 @@ class DagstuhlTranslator:
140
139
  Returns:
141
140
  Item dictionary
142
141
  """
143
- item = {
144
- "creators": [],
145
- "tags": [],
146
- "attachments": []
147
- }
142
+ item = {"creators": [], "tags": [], "attachments": []}
148
143
 
149
144
  # Would use BibTeX translator
150
145
  # Extract keywords from notes
@@ -31,7 +31,7 @@ class DarAlmandumahTranslator:
31
31
  "priority": 100,
32
32
  "inRepository": True,
33
33
  "translatorType": 4, # Web
34
- "lastUpdated": "2021-07-30 23:08:33"
34
+ "lastUpdated": "2021-07-30 23:08:33",
35
35
  }
36
36
 
37
37
  def detect_web(self, doc, url: str) -> Optional[str]:
@@ -88,7 +88,9 @@ class DarAlmandumahTranslator:
88
88
  return {}
89
89
 
90
90
  # Construct EndNote export URL
91
- export_url = f"https://search.mandumah.com/Record/{record_id}/Export?style=EndNote"
91
+ export_url = (
92
+ f"https://search.mandumah.com/Record/{record_id}/Export?style=EndNote"
93
+ )
92
94
 
93
95
  # Fetch EndNote data
94
96
  # In real implementation, would fetch and parse
@@ -103,11 +105,13 @@ class DarAlmandumahTranslator:
103
105
  # Add PDF if available
104
106
  pdf_url = self._get_pdf_url(doc)
105
107
  if pdf_url:
106
- item["attachments"].append({
107
- "url": pdf_url,
108
- "title": "Full Text PDF",
109
- "mimeType": "application/pdf"
110
- })
108
+ item["attachments"].append(
109
+ {
110
+ "url": pdf_url,
111
+ "title": "Full Text PDF",
112
+ "mimeType": "application/pdf",
113
+ }
114
+ )
111
115
 
112
116
  return item
113
117
 
@@ -145,11 +149,11 @@ class DarAlmandumahTranslator:
145
149
  "itemType": "journalArticle",
146
150
  "creators": [],
147
151
  "tags": [],
148
- "attachments": []
152
+ "attachments": [],
149
153
  }
150
154
 
151
155
  # Clean Arabic commas in author names
152
- text = re.sub(r'^(\s*%[AEY].*)،', r'\1,', text, flags=re.MULTILINE)
156
+ text = re.sub(r"^(\s*%[AEY].*)،", r"\1,", text, flags=re.MULTILINE)
153
157
 
154
158
  # Would use Refer/BibIX translator
155
159
 
@@ -30,7 +30,7 @@ class DARTEuropeTranslator:
30
30
  "priority": 100,
31
31
  "inRepository": True,
32
32
  "translatorType": 4, # Web
33
- "lastUpdated": "2022-05-04 03:09:28"
33
+ "lastUpdated": "2022-05-04 03:09:28",
34
34
  }
35
35
 
36
36
  def detect_web(self, doc, url: str) -> Optional[str]:
@@ -80,12 +80,7 @@ class DARTEuropeTranslator:
80
80
  Returns:
81
81
  Scraped item data
82
82
  """
83
- item = {
84
- "itemType": "thesis",
85
- "creators": [],
86
- "tags": [],
87
- "attachments": []
88
- }
83
+ item = {"itemType": "thesis", "creators": [], "tags": [], "attachments": []}
89
84
 
90
85
  # Extract title
91
86
  title = self._get_field_value(doc, "Title")
@@ -125,11 +120,9 @@ class DARTEuropeTranslator:
125
120
  # Extract author
126
121
  author = self._get_field_value(doc, "Author")
127
122
  if author:
128
- item["creators"].append({
129
- "firstName": "",
130
- "lastName": author,
131
- "creatorType": "author"
132
- })
123
+ item["creators"].append(
124
+ {"firstName": "", "lastName": author, "creatorType": "author"}
125
+ )
133
126
 
134
127
  # Extract subjects as tags
135
128
  subjects = self._get_field_value(doc, "Subject(s)")
@@ -142,17 +135,21 @@ class DARTEuropeTranslator:
142
135
  if fulltext:
143
136
  fulltext = fulltext.strip()
144
137
  if ".pdf" in fulltext.lower():
145
- item["attachments"].append({
146
- "url": fulltext,
147
- "title": "Dart-Europe Full Text PDF",
148
- "mimeType": "application/pdf"
149
- })
138
+ item["attachments"].append(
139
+ {
140
+ "url": fulltext,
141
+ "title": "Dart-Europe Full Text PDF",
142
+ "mimeType": "application/pdf",
143
+ }
144
+ )
150
145
  elif fulltext.startswith("http"):
151
- item["attachments"].append({
152
- "url": fulltext,
153
- "title": "DART-Europe Thesis Page",
154
- "mimeType": "text/html"
155
- })
146
+ item["attachments"].append(
147
+ {
148
+ "url": fulltext,
149
+ "title": "DART-Europe Thesis Page",
150
+ "mimeType": "text/html",
151
+ }
152
+ )
156
153
 
157
154
  item["url"] = url
158
155
  item["libraryCatalog"] = "DART-Europe"
@@ -30,7 +30,7 @@ class DataGovTranslator:
30
30
  "priority": 100,
31
31
  "inRepository": True,
32
32
  "translatorType": 4, # Web
33
- "lastUpdated": "2021-07-21 21:34:07"
33
+ "lastUpdated": "2021-07-21 21:34:07",
34
34
  }
35
35
 
36
36
  def detect_web(self, doc, url: str) -> Optional[str]:
@@ -88,7 +88,7 @@ class DataGovTranslator:
88
88
  "attachments": [],
89
89
  "language": "en",
90
90
  "url": url,
91
- "libraryCatalog": "Data.gov"
91
+ "libraryCatalog": "Data.gov",
92
92
  }
93
93
 
94
94
  # Extract from Schema.org metadata
@@ -34,7 +34,7 @@ class DatabaryTranslator:
34
34
  "inRepository": True,
35
35
  "translatorType": 4,
36
36
  "browserSupport": "gcsibv",
37
- "lastUpdated": "2023-04-19 16:49:05"
37
+ "lastUpdated": "2023-04-19 16:49:05",
38
38
  }
39
39
 
40
40
  def detect_web(self, doc: BeautifulSoup, url: str) -> str:
@@ -48,16 +48,18 @@ class DatabaryTranslator:
48
48
  Returns:
49
49
  'dataset' for volume pages, 'multiple' for search, empty string otherwise
50
50
  """
51
- if '/volume/' in url:
52
- return 'dataset'
53
- elif '/search?q=' in url:
51
+ if "/volume/" in url:
52
+ return "dataset"
53
+ elif "/search?q=" in url:
54
54
  # Check if there are search results
55
- rows = doc.select('h3.search-volume-result-title>a')
55
+ rows = doc.select("h3.search-volume-result-title>a")
56
56
  if rows:
57
- return 'multiple'
58
- return ''
57
+ return "multiple"
58
+ return ""
59
59
 
60
- def get_search_results(self, doc: BeautifulSoup, check_only: bool = False) -> Optional[Dict[str, str]]:
60
+ def get_search_results(
61
+ self, doc: BeautifulSoup, check_only: bool = False
62
+ ) -> Optional[Dict[str, str]]:
61
63
  """
62
64
  Extract search results from the page.
63
65
 
@@ -69,17 +71,17 @@ class DatabaryTranslator:
69
71
  Dictionary mapping URLs to titles, or None if none found
70
72
  """
71
73
  items = {}
72
- rows = doc.select('h3.search-volume-result-title>a')
74
+ rows = doc.select("h3.search-volume-result-title>a")
73
75
 
74
76
  for row in rows:
75
- href = row.get('href')
77
+ href = row.get("href")
76
78
  title = row.get_text(strip=True)
77
79
 
78
80
  if not href or not title:
79
81
  continue
80
82
 
81
83
  if check_only:
82
- return {'found': 'true'}
84
+ return {"found": "true"}
83
85
 
84
86
  items[href] = title
85
87
 
@@ -98,7 +100,7 @@ class DatabaryTranslator:
98
100
  """
99
101
  page_type = self.detect_web(doc, url)
100
102
 
101
- if page_type == 'multiple':
103
+ if page_type == "multiple":
102
104
  return self.get_search_results(doc, check_only=False)
103
105
  else:
104
106
  return self.scrape(doc, url)
@@ -114,32 +116,29 @@ class DatabaryTranslator:
114
116
  Returns:
115
117
  Dictionary containing dataset metadata
116
118
  """
117
- item = {
118
- 'itemType': 'dataset',
119
- 'creators': [],
120
- 'tags': [],
121
- 'attachments': []
122
- }
119
+ item = {"itemType": "dataset", "creators": [], "tags": [], "attachments": []}
123
120
 
124
121
  # Extract DOI from the citation panel
125
- doi_link = doc.select_one('p.panel-overview-volume-citation>a')
122
+ doi_link = doc.select_one("p.panel-overview-volume-citation>a")
126
123
  if doi_link:
127
- doi = doi_link.get('href', '').replace('https://doi.org/', '').replace('http://doi.org/', '')
124
+ doi = (
125
+ doi_link.get("href", "")
126
+ .replace("https://doi.org/", "")
127
+ .replace("http://doi.org/", "")
128
+ )
128
129
  if doi:
129
- item['DOI'] = doi
130
+ item["DOI"] = doi
130
131
  # Set repository info
131
- item['repository'] = 'Databrary'
132
- item['libraryCatalog'] = 'Databrary'
132
+ item["repository"] = "Databrary"
133
+ item["libraryCatalog"] = "Databrary"
133
134
 
134
135
  # Note: In the original JS, this fetches RIS data from DataCite
135
136
  # For Python implementation, we'd extract DOI and let the DOI resolver handle it
136
137
  # or we could implement RIS fetching here
137
138
 
138
139
  # Add snapshot attachment
139
- item['attachments'].append({
140
- 'title': 'Snapshot',
141
- 'url': url,
142
- 'mimeType': 'text/html'
143
- })
140
+ item["attachments"].append(
141
+ {"title": "Snapshot", "url": url, "mimeType": "text/html"}
142
+ )
144
143
 
145
144
  return item