scipy 1.16.2__cp313-cp313-win_arm64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scipy/__config__.py +161 -0
- scipy/__init__.py +150 -0
- scipy/_cyutility.cp313-win_arm64.lib +0 -0
- scipy/_cyutility.cp313-win_arm64.pyd +0 -0
- scipy/_distributor_init.py +18 -0
- scipy/_lib/__init__.py +14 -0
- scipy/_lib/_array_api.py +931 -0
- scipy/_lib/_array_api_compat_vendor.py +9 -0
- scipy/_lib/_array_api_no_0d.py +103 -0
- scipy/_lib/_bunch.py +229 -0
- scipy/_lib/_ccallback.py +251 -0
- scipy/_lib/_ccallback_c.cp313-win_arm64.lib +0 -0
- scipy/_lib/_ccallback_c.cp313-win_arm64.pyd +0 -0
- scipy/_lib/_disjoint_set.py +254 -0
- scipy/_lib/_docscrape.py +761 -0
- scipy/_lib/_elementwise_iterative_method.py +346 -0
- scipy/_lib/_fpumode.cp313-win_arm64.lib +0 -0
- scipy/_lib/_fpumode.cp313-win_arm64.pyd +0 -0
- scipy/_lib/_gcutils.py +105 -0
- scipy/_lib/_pep440.py +487 -0
- scipy/_lib/_sparse.py +41 -0
- scipy/_lib/_test_ccallback.cp313-win_arm64.lib +0 -0
- scipy/_lib/_test_ccallback.cp313-win_arm64.pyd +0 -0
- scipy/_lib/_test_deprecation_call.cp313-win_arm64.lib +0 -0
- scipy/_lib/_test_deprecation_call.cp313-win_arm64.pyd +0 -0
- scipy/_lib/_test_deprecation_def.cp313-win_arm64.lib +0 -0
- scipy/_lib/_test_deprecation_def.cp313-win_arm64.pyd +0 -0
- scipy/_lib/_testutils.py +373 -0
- scipy/_lib/_threadsafety.py +58 -0
- scipy/_lib/_tmpdirs.py +86 -0
- scipy/_lib/_uarray/LICENSE +29 -0
- scipy/_lib/_uarray/__init__.py +116 -0
- scipy/_lib/_uarray/_backend.py +707 -0
- scipy/_lib/_uarray/_uarray.cp313-win_arm64.lib +0 -0
- scipy/_lib/_uarray/_uarray.cp313-win_arm64.pyd +0 -0
- scipy/_lib/_util.py +1283 -0
- scipy/_lib/array_api_compat/__init__.py +22 -0
- scipy/_lib/array_api_compat/_internal.py +59 -0
- scipy/_lib/array_api_compat/common/__init__.py +1 -0
- scipy/_lib/array_api_compat/common/_aliases.py +727 -0
- scipy/_lib/array_api_compat/common/_fft.py +213 -0
- scipy/_lib/array_api_compat/common/_helpers.py +1058 -0
- scipy/_lib/array_api_compat/common/_linalg.py +232 -0
- scipy/_lib/array_api_compat/common/_typing.py +192 -0
- scipy/_lib/array_api_compat/cupy/__init__.py +13 -0
- scipy/_lib/array_api_compat/cupy/_aliases.py +156 -0
- scipy/_lib/array_api_compat/cupy/_info.py +336 -0
- scipy/_lib/array_api_compat/cupy/_typing.py +31 -0
- scipy/_lib/array_api_compat/cupy/fft.py +36 -0
- scipy/_lib/array_api_compat/cupy/linalg.py +49 -0
- scipy/_lib/array_api_compat/dask/__init__.py +0 -0
- scipy/_lib/array_api_compat/dask/array/__init__.py +12 -0
- scipy/_lib/array_api_compat/dask/array/_aliases.py +376 -0
- scipy/_lib/array_api_compat/dask/array/_info.py +416 -0
- scipy/_lib/array_api_compat/dask/array/fft.py +21 -0
- scipy/_lib/array_api_compat/dask/array/linalg.py +72 -0
- scipy/_lib/array_api_compat/numpy/__init__.py +28 -0
- scipy/_lib/array_api_compat/numpy/_aliases.py +190 -0
- scipy/_lib/array_api_compat/numpy/_info.py +366 -0
- scipy/_lib/array_api_compat/numpy/_typing.py +30 -0
- scipy/_lib/array_api_compat/numpy/fft.py +35 -0
- scipy/_lib/array_api_compat/numpy/linalg.py +143 -0
- scipy/_lib/array_api_compat/torch/__init__.py +22 -0
- scipy/_lib/array_api_compat/torch/_aliases.py +855 -0
- scipy/_lib/array_api_compat/torch/_info.py +369 -0
- scipy/_lib/array_api_compat/torch/_typing.py +3 -0
- scipy/_lib/array_api_compat/torch/fft.py +85 -0
- scipy/_lib/array_api_compat/torch/linalg.py +121 -0
- scipy/_lib/array_api_extra/__init__.py +38 -0
- scipy/_lib/array_api_extra/_delegation.py +171 -0
- scipy/_lib/array_api_extra/_lib/__init__.py +1 -0
- scipy/_lib/array_api_extra/_lib/_at.py +463 -0
- scipy/_lib/array_api_extra/_lib/_backends.py +46 -0
- scipy/_lib/array_api_extra/_lib/_funcs.py +937 -0
- scipy/_lib/array_api_extra/_lib/_lazy.py +357 -0
- scipy/_lib/array_api_extra/_lib/_testing.py +278 -0
- scipy/_lib/array_api_extra/_lib/_utils/__init__.py +1 -0
- scipy/_lib/array_api_extra/_lib/_utils/_compat.py +74 -0
- scipy/_lib/array_api_extra/_lib/_utils/_compat.pyi +45 -0
- scipy/_lib/array_api_extra/_lib/_utils/_helpers.py +559 -0
- scipy/_lib/array_api_extra/_lib/_utils/_typing.py +10 -0
- scipy/_lib/array_api_extra/_lib/_utils/_typing.pyi +105 -0
- scipy/_lib/array_api_extra/testing.py +359 -0
- scipy/_lib/cobyqa/__init__.py +20 -0
- scipy/_lib/cobyqa/framework.py +1240 -0
- scipy/_lib/cobyqa/main.py +1506 -0
- scipy/_lib/cobyqa/models.py +1529 -0
- scipy/_lib/cobyqa/problem.py +1296 -0
- scipy/_lib/cobyqa/settings.py +132 -0
- scipy/_lib/cobyqa/subsolvers/__init__.py +14 -0
- scipy/_lib/cobyqa/subsolvers/geometry.py +387 -0
- scipy/_lib/cobyqa/subsolvers/optim.py +1203 -0
- scipy/_lib/cobyqa/utils/__init__.py +18 -0
- scipy/_lib/cobyqa/utils/exceptions.py +22 -0
- scipy/_lib/cobyqa/utils/math.py +77 -0
- scipy/_lib/cobyqa/utils/versions.py +67 -0
- scipy/_lib/decorator.py +399 -0
- scipy/_lib/deprecation.py +274 -0
- scipy/_lib/doccer.py +366 -0
- scipy/_lib/messagestream.cp313-win_arm64.lib +0 -0
- scipy/_lib/messagestream.cp313-win_arm64.pyd +0 -0
- scipy/_lib/pyprima/__init__.py +212 -0
- scipy/_lib/pyprima/cobyla/__init__.py +0 -0
- scipy/_lib/pyprima/cobyla/cobyla.py +559 -0
- scipy/_lib/pyprima/cobyla/cobylb.py +714 -0
- scipy/_lib/pyprima/cobyla/geometry.py +226 -0
- scipy/_lib/pyprima/cobyla/initialize.py +215 -0
- scipy/_lib/pyprima/cobyla/trustregion.py +492 -0
- scipy/_lib/pyprima/cobyla/update.py +289 -0
- scipy/_lib/pyprima/common/__init__.py +0 -0
- scipy/_lib/pyprima/common/_bounds.py +34 -0
- scipy/_lib/pyprima/common/_linear_constraints.py +46 -0
- scipy/_lib/pyprima/common/_nonlinear_constraints.py +54 -0
- scipy/_lib/pyprima/common/_project.py +173 -0
- scipy/_lib/pyprima/common/checkbreak.py +93 -0
- scipy/_lib/pyprima/common/consts.py +47 -0
- scipy/_lib/pyprima/common/evaluate.py +99 -0
- scipy/_lib/pyprima/common/history.py +38 -0
- scipy/_lib/pyprima/common/infos.py +30 -0
- scipy/_lib/pyprima/common/linalg.py +435 -0
- scipy/_lib/pyprima/common/message.py +290 -0
- scipy/_lib/pyprima/common/powalg.py +131 -0
- scipy/_lib/pyprima/common/preproc.py +277 -0
- scipy/_lib/pyprima/common/present.py +5 -0
- scipy/_lib/pyprima/common/ratio.py +54 -0
- scipy/_lib/pyprima/common/redrho.py +47 -0
- scipy/_lib/pyprima/common/selectx.py +296 -0
- scipy/_lib/tests/__init__.py +0 -0
- scipy/_lib/tests/test__gcutils.py +110 -0
- scipy/_lib/tests/test__pep440.py +67 -0
- scipy/_lib/tests/test__testutils.py +32 -0
- scipy/_lib/tests/test__threadsafety.py +51 -0
- scipy/_lib/tests/test__util.py +641 -0
- scipy/_lib/tests/test_array_api.py +322 -0
- scipy/_lib/tests/test_bunch.py +169 -0
- scipy/_lib/tests/test_ccallback.py +196 -0
- scipy/_lib/tests/test_config.py +45 -0
- scipy/_lib/tests/test_deprecation.py +10 -0
- scipy/_lib/tests/test_doccer.py +143 -0
- scipy/_lib/tests/test_import_cycles.py +18 -0
- scipy/_lib/tests/test_public_api.py +482 -0
- scipy/_lib/tests/test_scipy_version.py +28 -0
- scipy/_lib/tests/test_tmpdirs.py +48 -0
- scipy/_lib/tests/test_warnings.py +137 -0
- scipy/_lib/uarray.py +31 -0
- scipy/cluster/__init__.py +31 -0
- scipy/cluster/_hierarchy.cp313-win_arm64.lib +0 -0
- scipy/cluster/_hierarchy.cp313-win_arm64.pyd +0 -0
- scipy/cluster/_optimal_leaf_ordering.cp313-win_arm64.lib +0 -0
- scipy/cluster/_optimal_leaf_ordering.cp313-win_arm64.pyd +0 -0
- scipy/cluster/_vq.cp313-win_arm64.lib +0 -0
- scipy/cluster/_vq.cp313-win_arm64.pyd +0 -0
- scipy/cluster/hierarchy.py +4348 -0
- scipy/cluster/tests/__init__.py +0 -0
- scipy/cluster/tests/hierarchy_test_data.py +145 -0
- scipy/cluster/tests/test_disjoint_set.py +202 -0
- scipy/cluster/tests/test_hierarchy.py +1238 -0
- scipy/cluster/tests/test_vq.py +434 -0
- scipy/cluster/vq.py +832 -0
- scipy/conftest.py +683 -0
- scipy/constants/__init__.py +358 -0
- scipy/constants/_codata.py +2266 -0
- scipy/constants/_constants.py +369 -0
- scipy/constants/codata.py +21 -0
- scipy/constants/constants.py +53 -0
- scipy/constants/tests/__init__.py +0 -0
- scipy/constants/tests/test_codata.py +78 -0
- scipy/constants/tests/test_constants.py +83 -0
- scipy/datasets/__init__.py +90 -0
- scipy/datasets/_download_all.py +71 -0
- scipy/datasets/_fetchers.py +225 -0
- scipy/datasets/_registry.py +26 -0
- scipy/datasets/_utils.py +81 -0
- scipy/datasets/tests/__init__.py +0 -0
- scipy/datasets/tests/test_data.py +128 -0
- scipy/differentiate/__init__.py +27 -0
- scipy/differentiate/_differentiate.py +1129 -0
- scipy/differentiate/tests/__init__.py +0 -0
- scipy/differentiate/tests/test_differentiate.py +694 -0
- scipy/fft/__init__.py +114 -0
- scipy/fft/_backend.py +196 -0
- scipy/fft/_basic.py +1650 -0
- scipy/fft/_basic_backend.py +197 -0
- scipy/fft/_debug_backends.py +22 -0
- scipy/fft/_fftlog.py +223 -0
- scipy/fft/_fftlog_backend.py +200 -0
- scipy/fft/_helper.py +348 -0
- scipy/fft/_pocketfft/LICENSE.md +25 -0
- scipy/fft/_pocketfft/__init__.py +9 -0
- scipy/fft/_pocketfft/basic.py +251 -0
- scipy/fft/_pocketfft/helper.py +249 -0
- scipy/fft/_pocketfft/pypocketfft.cp313-win_arm64.lib +0 -0
- scipy/fft/_pocketfft/pypocketfft.cp313-win_arm64.pyd +0 -0
- scipy/fft/_pocketfft/realtransforms.py +109 -0
- scipy/fft/_pocketfft/tests/__init__.py +0 -0
- scipy/fft/_pocketfft/tests/test_basic.py +1011 -0
- scipy/fft/_pocketfft/tests/test_real_transforms.py +505 -0
- scipy/fft/_realtransforms.py +706 -0
- scipy/fft/_realtransforms_backend.py +63 -0
- scipy/fft/tests/__init__.py +0 -0
- scipy/fft/tests/mock_backend.py +96 -0
- scipy/fft/tests/test_backend.py +98 -0
- scipy/fft/tests/test_basic.py +504 -0
- scipy/fft/tests/test_fftlog.py +215 -0
- scipy/fft/tests/test_helper.py +558 -0
- scipy/fft/tests/test_multithreading.py +84 -0
- scipy/fft/tests/test_real_transforms.py +247 -0
- scipy/fftpack/__init__.py +103 -0
- scipy/fftpack/_basic.py +428 -0
- scipy/fftpack/_helper.py +115 -0
- scipy/fftpack/_pseudo_diffs.py +554 -0
- scipy/fftpack/_realtransforms.py +598 -0
- scipy/fftpack/basic.py +20 -0
- scipy/fftpack/convolve.cp313-win_arm64.lib +0 -0
- scipy/fftpack/convolve.cp313-win_arm64.pyd +0 -0
- scipy/fftpack/helper.py +19 -0
- scipy/fftpack/pseudo_diffs.py +22 -0
- scipy/fftpack/realtransforms.py +19 -0
- scipy/fftpack/tests/__init__.py +0 -0
- scipy/fftpack/tests/fftw_double_ref.npz +0 -0
- scipy/fftpack/tests/fftw_longdouble_ref.npz +0 -0
- scipy/fftpack/tests/fftw_single_ref.npz +0 -0
- scipy/fftpack/tests/test.npz +0 -0
- scipy/fftpack/tests/test_basic.py +877 -0
- scipy/fftpack/tests/test_helper.py +54 -0
- scipy/fftpack/tests/test_import.py +33 -0
- scipy/fftpack/tests/test_pseudo_diffs.py +388 -0
- scipy/fftpack/tests/test_real_transforms.py +836 -0
- scipy/integrate/__init__.py +122 -0
- scipy/integrate/_bvp.py +1160 -0
- scipy/integrate/_cubature.py +729 -0
- scipy/integrate/_dop.cp313-win_arm64.lib +0 -0
- scipy/integrate/_dop.cp313-win_arm64.pyd +0 -0
- scipy/integrate/_ivp/__init__.py +8 -0
- scipy/integrate/_ivp/base.py +290 -0
- scipy/integrate/_ivp/bdf.py +478 -0
- scipy/integrate/_ivp/common.py +451 -0
- scipy/integrate/_ivp/dop853_coefficients.py +193 -0
- scipy/integrate/_ivp/ivp.py +755 -0
- scipy/integrate/_ivp/lsoda.py +224 -0
- scipy/integrate/_ivp/radau.py +572 -0
- scipy/integrate/_ivp/rk.py +601 -0
- scipy/integrate/_ivp/tests/__init__.py +0 -0
- scipy/integrate/_ivp/tests/test_ivp.py +1287 -0
- scipy/integrate/_ivp/tests/test_rk.py +37 -0
- scipy/integrate/_lebedev.py +5450 -0
- scipy/integrate/_lsoda.cp313-win_arm64.lib +0 -0
- scipy/integrate/_lsoda.cp313-win_arm64.pyd +0 -0
- scipy/integrate/_ode.py +1395 -0
- scipy/integrate/_odepack.cp313-win_arm64.lib +0 -0
- scipy/integrate/_odepack.cp313-win_arm64.pyd +0 -0
- scipy/integrate/_odepack_py.py +273 -0
- scipy/integrate/_quad_vec.py +674 -0
- scipy/integrate/_quadpack.cp313-win_arm64.lib +0 -0
- scipy/integrate/_quadpack.cp313-win_arm64.pyd +0 -0
- scipy/integrate/_quadpack_py.py +1283 -0
- scipy/integrate/_quadrature.py +1336 -0
- scipy/integrate/_rules/__init__.py +12 -0
- scipy/integrate/_rules/_base.py +518 -0
- scipy/integrate/_rules/_gauss_kronrod.py +202 -0
- scipy/integrate/_rules/_gauss_legendre.py +62 -0
- scipy/integrate/_rules/_genz_malik.py +210 -0
- scipy/integrate/_tanhsinh.py +1385 -0
- scipy/integrate/_test_multivariate.cp313-win_arm64.lib +0 -0
- scipy/integrate/_test_multivariate.cp313-win_arm64.pyd +0 -0
- scipy/integrate/_test_odeint_banded.cp313-win_arm64.lib +0 -0
- scipy/integrate/_test_odeint_banded.cp313-win_arm64.pyd +0 -0
- scipy/integrate/_vode.cp313-win_arm64.lib +0 -0
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- scipy/integrate/lsoda.py +15 -0
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- scipy/integrate/quadpack.py +23 -0
- scipy/integrate/tests/__init__.py +0 -0
- scipy/integrate/tests/test__quad_vec.py +211 -0
- scipy/integrate/tests/test_banded_ode_solvers.py +305 -0
- scipy/integrate/tests/test_bvp.py +714 -0
- scipy/integrate/tests/test_cubature.py +1375 -0
- scipy/integrate/tests/test_integrate.py +840 -0
- scipy/integrate/tests/test_odeint_jac.py +74 -0
- scipy/integrate/tests/test_quadpack.py +680 -0
- scipy/integrate/tests/test_quadrature.py +730 -0
- scipy/integrate/tests/test_tanhsinh.py +1171 -0
- scipy/integrate/vode.py +15 -0
- scipy/interpolate/__init__.py +228 -0
- scipy/interpolate/_bary_rational.py +715 -0
- scipy/interpolate/_bsplines.py +2469 -0
- scipy/interpolate/_cubic.py +973 -0
- scipy/interpolate/_dfitpack.cp313-win_arm64.lib +0 -0
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- scipy/io/_fast_matrix_market/__init__.py +600 -0
- scipy/io/_fast_matrix_market/_fmm_core.cp313-win_arm64.lib +0 -0
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- scipy/io/_harwell_boeing/__init__.py +7 -0
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import math
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import numpy as np
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from numpy.testing import assert_equal, assert_allclose, suppress_warnings
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import pytest
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from scipy.linalg import block_diag
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from scipy.sparse import coo_array, random_array, SparseEfficiencyWarning
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from .._coo import _block_diag, _extract_block_diag
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def test_shape_constructor():
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empty1d = coo_array((3,))
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assert empty1d.shape == (3,)
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assert_equal(empty1d.toarray(), np.zeros((3,)))
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empty2d = coo_array((3, 2))
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assert_equal(empty2d.toarray(), np.zeros((3, 2)))
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empty_nd = coo_array((2,3,4,6,7))
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assert empty_nd.shape == (2,3,4,6,7)
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assert_equal(empty_nd.toarray(), np.zeros((2,3,4,6,7)))
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def test_dense_constructor():
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# 1d
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res1d = coo_array([1, 2, 3])
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assert_equal(res1d.toarray(), np.array([1, 2, 3]))
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# 2d
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assert_equal(res2d.toarray(), np.array([[1, 2, 3], [4, 5, 6]]))
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# 4d
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arr4d = np.array([[[[3, 7], [1, 0]], [[6, 5], [9, 2]]],
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[[[4, 3], [2, 8]], [[7, 5], [1, 6]]],
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[[[0, 9], [4, 3]], [[2, 1], [7, 8]]]])
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res4d = coo_array(arr4d)
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assert res4d.shape == (3, 2, 2, 2)
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assert_equal(res4d.toarray(), arr4d)
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# 9d
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np.random.seed(12)
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arr9d = np.random.randn(2,3,4,7,6,5,3,2,4)
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res9d = coo_array(arr9d)
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assert res9d.shape == (2,3,4,7,6,5,3,2,4)
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assert_equal(res9d.toarray(), arr9d)
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# storing nan as element of sparse array
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nan_3d = coo_array([[[1, np.nan]], [[3, 4]], [[5, 6]]])
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assert nan_3d.shape == (3, 1, 2)
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assert_equal(nan_3d.toarray(), np.array([[[1, np.nan]], [[3, 4]], [[5, 6]]]))
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def test_dense_constructor_with_shape():
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assert_equal(res1d.toarray(), np.array([1, 2, 3]))
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res2d = coo_array([[1, 2, 3], [4, 5, 6]], shape=(2, 3))
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assert res2d.shape == (2, 3)
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assert_equal(res2d.toarray(), np.array([[1, 2, 3], [4, 5, 6]]))
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res3d = coo_array([[[3]], [[4]]], shape=(2, 1, 1))
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assert res3d.shape == (2, 1, 1)
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assert_equal(res3d.toarray(), np.array([[[3]], [[4]]]))
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np.random.seed(12)
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arr7d = np.random.randn(2,4,1,6,5,3,2)
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res7d = coo_array((arr7d), shape=(2,4,1,6,5,3,2))
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assert res7d.shape == (2,4,1,6,5,3,2)
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assert_equal(res7d.toarray(), arr7d)
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def test_dense_constructor_with_inconsistent_shape():
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with pytest.raises(ValueError, match='inconsistent shapes'):
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coo_array([1, 2, 3], shape=(4,))
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with pytest.raises(ValueError, match='inconsistent shapes'):
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coo_array([1, 2, 3], shape=(3, 1))
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with pytest.raises(ValueError, match='inconsistent shapes'):
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coo_array([[1, 2, 3]], shape=(3,))
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with pytest.raises(ValueError, match='inconsistent shapes'):
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coo_array([[[3]], [[4]]], shape=(1, 1, 1))
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with pytest.raises(ValueError,
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match='axis 0 index 2 exceeds matrix dimension 2'):
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coo_array(([1], ([2],)), shape=(2,))
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with pytest.raises(ValueError,
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match='axis 1 index 3 exceeds matrix dimension 3'):
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coo_array(([1,3], ([0, 1], [0, 3], [1, 1])), shape=(2, 3, 2))
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with pytest.raises(ValueError, match='negative axis 0 index: -1'):
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coo_array(([1], ([-1],)))
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with pytest.raises(ValueError, match='negative axis 2 index: -1'):
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coo_array(([1], ([0], [2], [-1])))
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def test_1d_sparse_constructor():
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empty1d = coo_array((3,))
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res = coo_array(empty1d)
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assert res.shape == (3,)
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assert_equal(res.toarray(), np.zeros((3,)))
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def test_1d_tuple_constructor():
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res = coo_array(([9,8], ([1,2],)))
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assert res.shape == (3,)
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assert_equal(res.toarray(), np.array([0, 9, 8]))
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def test_1d_tuple_constructor_with_shape():
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res = coo_array(([9,8], ([1,2],)), shape=(4,))
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assert res.shape == (4,)
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assert_equal(res.toarray(), np.array([0, 9, 8, 0]))
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def test_non_subscriptability():
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coo_2d = coo_array((2, 2))
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with pytest.raises(TypeError,
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match="'coo_array' object does not support item assignment"):
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coo_2d[0, 0] = 1
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with pytest.raises(TypeError,
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match="'coo_array' object is not subscriptable"):
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coo_2d[0, :]
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def test_reshape_overflow():
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# see gh-22353 : new idx_dtype can need to be int64 instead of int32
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M, N = (1045507, 523266)
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coords = (np.array([M - 1], dtype='int32'), np.array([N - 1], dtype='int32'))
|
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A = coo_array(([3.3], coords), shape=(M, N))
|
138
|
+
|
139
|
+
# need new idx_dtype to not overflow
|
140
|
+
B = A.reshape((M * N, 1))
|
141
|
+
assert B.coords[0].dtype == np.dtype('int64')
|
142
|
+
assert B.coords[0][0] == (M * N) - 1
|
143
|
+
|
144
|
+
# need idx_dtype to stay int32 if before and after can be int32
|
145
|
+
C = A.reshape(N, M)
|
146
|
+
assert C.coords[0].dtype == np.dtype('int32')
|
147
|
+
assert C.coords[0][0] == N - 1
|
148
|
+
|
149
|
+
def test_reshape():
|
150
|
+
arr1d = coo_array([1, 0, 3])
|
151
|
+
assert arr1d.shape == (3,)
|
152
|
+
|
153
|
+
col_vec = arr1d.reshape((3, 1))
|
154
|
+
assert col_vec.shape == (3, 1)
|
155
|
+
assert_equal(col_vec.toarray(), np.array([[1], [0], [3]]))
|
156
|
+
|
157
|
+
row_vec = arr1d.reshape((1, 3))
|
158
|
+
assert row_vec.shape == (1, 3)
|
159
|
+
assert_equal(row_vec.toarray(), np.array([[1, 0, 3]]))
|
160
|
+
|
161
|
+
# attempting invalid reshape
|
162
|
+
with pytest.raises(ValueError, match="cannot reshape array"):
|
163
|
+
arr1d.reshape((3,3))
|
164
|
+
|
165
|
+
# attempting reshape with a size 0 dimension
|
166
|
+
with pytest.raises(ValueError, match="cannot reshape array"):
|
167
|
+
arr1d.reshape((3,0))
|
168
|
+
|
169
|
+
arr2d = coo_array([[1, 2, 0], [0, 0, 3]])
|
170
|
+
assert arr2d.shape == (2, 3)
|
171
|
+
|
172
|
+
flat = arr2d.reshape((6,))
|
173
|
+
assert flat.shape == (6,)
|
174
|
+
assert_equal(flat.toarray(), np.array([1, 2, 0, 0, 0, 3]))
|
175
|
+
|
176
|
+
# 2d to 3d
|
177
|
+
to_3d_arr = arr2d.reshape((2, 3, 1))
|
178
|
+
assert to_3d_arr.shape == (2, 3, 1)
|
179
|
+
assert_equal(to_3d_arr.toarray(), np.array([[[1], [2], [0]], [[0], [0], [3]]]))
|
180
|
+
|
181
|
+
# attempting invalid reshape
|
182
|
+
with pytest.raises(ValueError, match="cannot reshape array"):
|
183
|
+
arr2d.reshape((1,3))
|
184
|
+
|
185
|
+
|
186
|
+
def test_nnz():
|
187
|
+
arr1d = coo_array([1, 0, 3])
|
188
|
+
assert arr1d.shape == (3,)
|
189
|
+
assert arr1d.nnz == 2
|
190
|
+
|
191
|
+
arr2d = coo_array([[1, 2, 0], [0, 0, 3]])
|
192
|
+
assert arr2d.shape == (2, 3)
|
193
|
+
assert arr2d.nnz == 3
|
194
|
+
|
195
|
+
|
196
|
+
def test_transpose():
|
197
|
+
arr1d = coo_array([1, 0, 3]).T
|
198
|
+
assert arr1d.shape == (3,)
|
199
|
+
assert_equal(arr1d.toarray(), np.array([1, 0, 3]))
|
200
|
+
|
201
|
+
arr2d = coo_array([[1, 2, 0], [0, 0, 3]]).T
|
202
|
+
assert arr2d.shape == (3, 2)
|
203
|
+
assert_equal(arr2d.toarray(), np.array([[1, 0], [2, 0], [0, 3]]))
|
204
|
+
|
205
|
+
|
206
|
+
def test_transpose_with_axis():
|
207
|
+
arr1d = coo_array([1, 0, 3]).transpose(axes=(0,))
|
208
|
+
assert arr1d.shape == (3,)
|
209
|
+
assert_equal(arr1d.toarray(), np.array([1, 0, 3]))
|
210
|
+
|
211
|
+
arr2d = coo_array([[1, 2, 0], [0, 0, 3]]).transpose(axes=(0, 1))
|
212
|
+
assert arr2d.shape == (2, 3)
|
213
|
+
assert_equal(arr2d.toarray(), np.array([[1, 2, 0], [0, 0, 3]]))
|
214
|
+
|
215
|
+
with pytest.raises(ValueError, match="axes don't match matrix dimensions"):
|
216
|
+
coo_array([1, 0, 3]).transpose(axes=(0, 1))
|
217
|
+
|
218
|
+
with pytest.raises(ValueError, match="repeated axis in transpose"):
|
219
|
+
coo_array([[1, 2, 0], [0, 0, 3]]).transpose(axes=(1, 1))
|
220
|
+
|
221
|
+
|
222
|
+
def test_1d_row_and_col():
|
223
|
+
res = coo_array([1, -2, -3])
|
224
|
+
assert_equal(res.col, np.array([0, 1, 2]))
|
225
|
+
assert_equal(res.row, np.zeros_like(res.col))
|
226
|
+
assert res.row.dtype == res.col.dtype
|
227
|
+
assert res.row.flags.writeable is False
|
228
|
+
|
229
|
+
res.col = [1, 2, 3]
|
230
|
+
assert len(res.coords) == 1
|
231
|
+
assert_equal(res.col, np.array([1, 2, 3]))
|
232
|
+
assert res.row.dtype == res.col.dtype
|
233
|
+
|
234
|
+
with pytest.raises(ValueError, match="cannot set row attribute"):
|
235
|
+
res.row = [1, 2, 3]
|
236
|
+
|
237
|
+
|
238
|
+
def test_1d_toformats():
|
239
|
+
res = coo_array([1, -2, -3])
|
240
|
+
for f in [res.tobsr, res.tocsc, res.todia, res.tolil]:
|
241
|
+
with pytest.raises(ValueError, match='Cannot convert'):
|
242
|
+
f()
|
243
|
+
for f in [res.tocoo, res.tocsr, res.todok]:
|
244
|
+
assert_equal(f().toarray(), res.toarray())
|
245
|
+
|
246
|
+
|
247
|
+
@pytest.mark.parametrize('arg', [1, 2, 4, 5, 8])
|
248
|
+
def test_1d_resize(arg: int):
|
249
|
+
den = np.array([1, -2, -3])
|
250
|
+
res = coo_array(den)
|
251
|
+
den.resize(arg, refcheck=False)
|
252
|
+
res.resize(arg)
|
253
|
+
assert res.shape == den.shape
|
254
|
+
assert_equal(res.toarray(), den)
|
255
|
+
|
256
|
+
|
257
|
+
@pytest.mark.parametrize('arg', zip([1, 2, 3, 4], [1, 2, 3, 4]))
|
258
|
+
def test_1d_to_2d_resize(arg: tuple[int, int]):
|
259
|
+
den = np.array([1, 0, 3])
|
260
|
+
res = coo_array(den)
|
261
|
+
|
262
|
+
den.resize(arg, refcheck=False)
|
263
|
+
res.resize(arg)
|
264
|
+
assert res.shape == den.shape
|
265
|
+
assert_equal(res.toarray(), den)
|
266
|
+
|
267
|
+
|
268
|
+
@pytest.mark.parametrize('arg', [1, 4, 6, 8])
|
269
|
+
def test_2d_to_1d_resize(arg: int):
|
270
|
+
den = np.array([[1, 0, 3], [4, 0, 0]])
|
271
|
+
res = coo_array(den)
|
272
|
+
den.resize(arg, refcheck=False)
|
273
|
+
res.resize(arg)
|
274
|
+
assert res.shape == den.shape
|
275
|
+
assert_equal(res.toarray(), den)
|
276
|
+
|
277
|
+
|
278
|
+
def test_sum_duplicates():
|
279
|
+
# 1d case
|
280
|
+
arr1d = coo_array(([2, 2, 2], ([1, 0, 1],)))
|
281
|
+
assert arr1d.nnz == 3
|
282
|
+
assert_equal(arr1d.toarray(), np.array([2, 4]))
|
283
|
+
arr1d.sum_duplicates()
|
284
|
+
assert arr1d.nnz == 2
|
285
|
+
assert_equal(arr1d.toarray(), np.array([2, 4]))
|
286
|
+
|
287
|
+
# 4d case
|
288
|
+
arr4d = coo_array(([2, 3, 7], ([1, 0, 1], [0, 2, 0], [1, 2, 1], [1, 0, 1])))
|
289
|
+
assert arr4d.nnz == 3
|
290
|
+
expected = np.array( # noqa: E501
|
291
|
+
[[[[0, 0], [0, 0], [0, 0]], [[0, 0], [0, 0], [0, 0]], [[0, 0], [0, 0], [3, 0]]],
|
292
|
+
[[[0, 0], [0, 9], [0, 0]], [[0, 0], [0, 0], [0, 0]], [[0, 0], [0, 0], [0, 0]]]]
|
293
|
+
)
|
294
|
+
assert_equal(arr4d.toarray(), expected)
|
295
|
+
arr4d.sum_duplicates()
|
296
|
+
assert arr4d.nnz == 2
|
297
|
+
assert_equal(arr4d.toarray(), expected)
|
298
|
+
|
299
|
+
# when there are no duplicates
|
300
|
+
arr_nodups = coo_array(([1, 2, 3, 4], ([0, 1, 2, 3],)))
|
301
|
+
assert arr_nodups.nnz == 4
|
302
|
+
arr_nodups.sum_duplicates()
|
303
|
+
assert arr_nodups.nnz == 4
|
304
|
+
|
305
|
+
|
306
|
+
def test_eliminate_zeros():
|
307
|
+
arr1d = coo_array(([0, 0, 1], ([1, 0, 1],)))
|
308
|
+
assert arr1d.nnz == 3
|
309
|
+
assert arr1d.count_nonzero() == 1
|
310
|
+
assert_equal(arr1d.toarray(), np.array([0, 1]))
|
311
|
+
arr1d.eliminate_zeros()
|
312
|
+
assert arr1d.nnz == 1
|
313
|
+
assert arr1d.count_nonzero() == 1
|
314
|
+
assert_equal(arr1d.toarray(), np.array([0, 1]))
|
315
|
+
assert_equal(arr1d.col, np.array([1]))
|
316
|
+
assert_equal(arr1d.row, np.array([0]))
|
317
|
+
|
318
|
+
|
319
|
+
def test_1d_add_dense():
|
320
|
+
den_a = np.array([0, -2, -3, 0])
|
321
|
+
den_b = np.array([0, 1, 2, 3])
|
322
|
+
exp = den_a + den_b
|
323
|
+
res = coo_array(den_a) + den_b
|
324
|
+
assert type(res) is type(exp)
|
325
|
+
assert_equal(res, exp)
|
326
|
+
|
327
|
+
|
328
|
+
def test_1d_add_sparse():
|
329
|
+
den_a = np.array([0, -2, -3, 0])
|
330
|
+
den_b = np.array([0, 1, 2, 3])
|
331
|
+
dense_sum = den_a + den_b
|
332
|
+
# this routes through CSR format
|
333
|
+
sparse_sum = coo_array(den_a) + coo_array(den_b)
|
334
|
+
assert_equal(dense_sum, sparse_sum.toarray())
|
335
|
+
|
336
|
+
|
337
|
+
def test_1d_matmul_vector():
|
338
|
+
den_a = np.array([0, -2, -3, 0])
|
339
|
+
den_b = np.array([0, 1, 2, 3])
|
340
|
+
exp = den_a @ den_b
|
341
|
+
res = coo_array(den_a) @ den_b
|
342
|
+
assert np.ndim(res) == 0
|
343
|
+
assert_equal(res, exp)
|
344
|
+
|
345
|
+
|
346
|
+
def test_1d_matmul_multivector():
|
347
|
+
den = np.array([0, -2, -3, 0])
|
348
|
+
other = np.array([[0, 1, 2, 3], [3, 2, 1, 0]]).T
|
349
|
+
exp = den @ other
|
350
|
+
res = coo_array(den) @ other
|
351
|
+
assert type(res) is type(exp)
|
352
|
+
assert_equal(res, exp)
|
353
|
+
|
354
|
+
|
355
|
+
def test_2d_matmul_multivector():
|
356
|
+
# sparse-sparse matmul
|
357
|
+
den = np.array([[0, 1, 2, 3], [3, 2, 1, 0]])
|
358
|
+
arr2d = coo_array(den)
|
359
|
+
exp = den @ den.T
|
360
|
+
res = arr2d @ arr2d.T
|
361
|
+
assert_equal(res.toarray(), exp)
|
362
|
+
|
363
|
+
# sparse-dense matmul for self.ndim = 2
|
364
|
+
den = np.array([[0, 4, 3, 0, 5], [1, 0, 7, 3, 4]])
|
365
|
+
arr2d = coo_array(den)
|
366
|
+
exp = den @ den.T
|
367
|
+
res = arr2d @ den.T
|
368
|
+
assert_equal(res, exp)
|
369
|
+
|
370
|
+
# sparse-dense matmul for self.ndim = 1
|
371
|
+
den_a = np.array([[0, 4, 3, 0, 5], [1, 0, 7, 3, 4]])
|
372
|
+
den_b = np.array([0, 1, 6, 0, 4])
|
373
|
+
arr1d = coo_array(den_b)
|
374
|
+
exp = den_b @ den_a.T
|
375
|
+
res = arr1d @ den_a.T
|
376
|
+
assert_equal(res, exp)
|
377
|
+
|
378
|
+
# sparse-dense matmul for self.ndim = 1 and other.ndim = 2
|
379
|
+
den_a = np.array([1, 0, 2])
|
380
|
+
den_b = np.array([[3], [4], [0]])
|
381
|
+
exp = den_a @ den_b
|
382
|
+
res = coo_array(den_a) @ den_b
|
383
|
+
assert_equal(res, exp)
|
384
|
+
res = coo_array(den_a) @ list(den_b)
|
385
|
+
assert_equal(res, exp)
|
386
|
+
|
387
|
+
|
388
|
+
def test_1d_diagonal():
|
389
|
+
den = np.array([0, -2, -3, 0])
|
390
|
+
with pytest.raises(ValueError, match='diagonal requires two dimensions'):
|
391
|
+
coo_array(den).diagonal()
|
392
|
+
|
393
|
+
|
394
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
395
|
+
(1,0,3), (7,9,3,2,4,5)])
|
396
|
+
def test_nd_todense(shape):
|
397
|
+
np.random.seed(12)
|
398
|
+
arr = np.random.randint(low=0, high=5, size=shape)
|
399
|
+
assert_equal(coo_array(arr).todense(), arr)
|
400
|
+
|
401
|
+
|
402
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
403
|
+
(1,0,3), (7,9,3,2,4,5)])
|
404
|
+
def test_nd_sparse_constructor(shape):
|
405
|
+
empty_arr = coo_array(shape)
|
406
|
+
res = coo_array(empty_arr)
|
407
|
+
assert res.shape == (shape)
|
408
|
+
assert_equal(res.toarray(), np.zeros(shape))
|
409
|
+
|
410
|
+
|
411
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
412
|
+
(1,0,3), (7,9,3,2,4,5)])
|
413
|
+
def test_nd_tuple_constructor(shape):
|
414
|
+
np.random.seed(12)
|
415
|
+
arr = np.random.randn(*shape)
|
416
|
+
res = coo_array(arr)
|
417
|
+
assert res.shape == shape
|
418
|
+
assert_equal(res.toarray(), arr)
|
419
|
+
|
420
|
+
|
421
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
422
|
+
(1,0,3), (7,9,3,2,4,5)])
|
423
|
+
def test_nd_tuple_constructor_with_shape(shape):
|
424
|
+
np.random.seed(12)
|
425
|
+
arr = np.random.randn(*shape)
|
426
|
+
res = coo_array(arr, shape=shape)
|
427
|
+
assert res.shape == shape
|
428
|
+
assert_equal(res.toarray(), arr)
|
429
|
+
|
430
|
+
|
431
|
+
def test_tuple_constructor_for_dim_size_zero():
|
432
|
+
# arrays with a dimension of size 0
|
433
|
+
with pytest.raises(ValueError, match='exceeds matrix dimension'):
|
434
|
+
coo_array(([9, 8], ([1, 2], [1, 0], [2, 1])), shape=(3,4,0))
|
435
|
+
|
436
|
+
empty_arr = coo_array(([], ([], [], [], [])), shape=(4,0,2,3))
|
437
|
+
assert_equal(empty_arr.toarray(), np.empty((4,0,2,3)))
|
438
|
+
|
439
|
+
|
440
|
+
@pytest.mark.parametrize(('shape', 'new_shape'), [((4,9,6,5), (3,6,15,4)),
|
441
|
+
((4,9,6,5), (36,30)),
|
442
|
+
((4,9,6,5), (1080,)),
|
443
|
+
((4,9,6,5), (2,3,2,2,3,5,3)),])
|
444
|
+
def test_nd_reshape(shape, new_shape):
|
445
|
+
# reshaping a 4d sparse array
|
446
|
+
rng = np.random.default_rng(23409823)
|
447
|
+
|
448
|
+
arr4d = random_array(shape, density=0.6, rng=rng, dtype=int)
|
449
|
+
assert arr4d.shape == shape
|
450
|
+
den4d = arr4d.toarray()
|
451
|
+
|
452
|
+
exp_arr = den4d.reshape(new_shape)
|
453
|
+
res_arr = arr4d.reshape(new_shape)
|
454
|
+
assert res_arr.shape == new_shape
|
455
|
+
assert_equal(res_arr.toarray(), exp_arr)
|
456
|
+
|
457
|
+
|
458
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
459
|
+
(1,0,3), (7,9,3,2,4,5)])
|
460
|
+
def test_nd_nnz(shape):
|
461
|
+
rng = np.random.default_rng(23409823)
|
462
|
+
|
463
|
+
arr = random_array(shape, density=0.6, rng=rng, dtype=int)
|
464
|
+
assert arr.nnz == np.count_nonzero(arr.toarray())
|
465
|
+
|
466
|
+
|
467
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
468
|
+
(1,0,3), (7,9,3,2,4,5)])
|
469
|
+
def test_nd_transpose(shape):
|
470
|
+
rng = np.random.default_rng(23409823)
|
471
|
+
|
472
|
+
arr = random_array(shape, density=0.6, rng=rng, dtype=int)
|
473
|
+
exp_arr = arr.toarray().T
|
474
|
+
trans_arr = arr.transpose()
|
475
|
+
assert trans_arr.shape == shape[::-1]
|
476
|
+
assert_equal(exp_arr, trans_arr.toarray())
|
477
|
+
|
478
|
+
|
479
|
+
@pytest.mark.parametrize(('shape', 'axis_perm'), [((3,), (0,)),
|
480
|
+
((2,3), (0,1)),
|
481
|
+
((2,4,3,6,5,3), (1,2,0,5,3,4)),])
|
482
|
+
def test_nd_transpose_with_axis(shape, axis_perm):
|
483
|
+
rng = np.random.default_rng(23409823)
|
484
|
+
|
485
|
+
arr = random_array(shape, density=0.6, rng=rng, dtype=int)
|
486
|
+
trans_arr = arr.transpose(axes=axis_perm)
|
487
|
+
assert_equal(trans_arr.toarray(), np.transpose(arr.toarray(), axes=axis_perm))
|
488
|
+
|
489
|
+
|
490
|
+
def test_transpose_with_inconsistent_axis():
|
491
|
+
with pytest.raises(ValueError, match="axes don't match matrix dimensions"):
|
492
|
+
coo_array([1, 0, 3]).transpose(axes=(0, 1))
|
493
|
+
|
494
|
+
with pytest.raises(ValueError, match="repeated axis in transpose"):
|
495
|
+
coo_array([[1, 2, 0], [0, 0, 3]]).transpose(axes=(1, 1))
|
496
|
+
|
497
|
+
|
498
|
+
def test_nd_eliminate_zeros():
|
499
|
+
# for 3d sparse arrays
|
500
|
+
arr3d = coo_array(([1, 0, 0, 4], ([0, 1, 1, 2], [0, 1, 0, 1], [1, 1, 2, 0])))
|
501
|
+
assert arr3d.nnz == 4
|
502
|
+
assert arr3d.count_nonzero() == 2
|
503
|
+
assert_equal(arr3d.toarray(), np.array([[[0, 1, 0], [0, 0, 0]],
|
504
|
+
[[0, 0, 0], [0, 0, 0]], [[0, 0, 0], [4, 0, 0]]]))
|
505
|
+
arr3d.eliminate_zeros()
|
506
|
+
assert arr3d.nnz == 2
|
507
|
+
assert arr3d.count_nonzero() == 2
|
508
|
+
assert_equal(arr3d.toarray(), np.array([[[0, 1, 0], [0, 0, 0]],
|
509
|
+
[[0, 0, 0], [0, 0, 0]], [[0, 0, 0], [4, 0, 0]]]))
|
510
|
+
|
511
|
+
# for a 5d sparse array when all elements of data array are 0
|
512
|
+
coords = ([0, 1, 1, 2], [0, 1, 0, 1], [1, 1, 2, 0], [0, 0, 2, 3], [1, 0, 0, 2])
|
513
|
+
arr5d = coo_array(([0, 0, 0, 0], coords))
|
514
|
+
assert arr5d.nnz == 4
|
515
|
+
assert arr5d.count_nonzero() == 0
|
516
|
+
arr5d.eliminate_zeros()
|
517
|
+
assert arr5d.nnz == 0
|
518
|
+
assert arr5d.count_nonzero() == 0
|
519
|
+
assert_equal(arr5d.col, np.array([]))
|
520
|
+
assert_equal(arr5d.row, np.array([]))
|
521
|
+
assert_equal(arr5d.coords, ([], [], [], [], []))
|
522
|
+
|
523
|
+
|
524
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
525
|
+
(1,0,3), (7,9,3,2,4,5)])
|
526
|
+
def test_nd_add_dense(shape):
|
527
|
+
rng = np.random.default_rng(23409823)
|
528
|
+
sp_x = random_array(shape, density=0.6, rng=rng, dtype=int)
|
529
|
+
sp_y = random_array(shape, density=0.6, rng=rng, dtype=int)
|
530
|
+
den_x, den_y = sp_x.toarray(), sp_y.toarray()
|
531
|
+
exp = den_x + den_y
|
532
|
+
res = sp_x + den_y
|
533
|
+
assert type(res) is type(exp)
|
534
|
+
assert_equal(res, exp)
|
535
|
+
|
536
|
+
|
537
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
538
|
+
(1,0,3), (7,9,3,2,4,5)])
|
539
|
+
def test_nd_add_sparse(shape):
|
540
|
+
rng = np.random.default_rng(23409823)
|
541
|
+
sp_x = random_array((shape), density=0.6, rng=rng, dtype=int)
|
542
|
+
sp_y = random_array((shape), density=0.6, rng=rng, dtype=int)
|
543
|
+
den_x, den_y = sp_x.toarray(), sp_y.toarray()
|
544
|
+
|
545
|
+
dense_sum = den_x + den_y
|
546
|
+
sparse_sum = sp_x + sp_y
|
547
|
+
assert_equal(dense_sum, sparse_sum.toarray())
|
548
|
+
|
549
|
+
|
550
|
+
def test_add_sparse_with_inf():
|
551
|
+
# addition of sparse arrays with an inf element
|
552
|
+
den_a = np.array([[[0], [np.inf]], [[-3], [0]]])
|
553
|
+
den_b = np.array([[[0], [1]], [[2], [3]]])
|
554
|
+
dense_sum = den_a + den_b
|
555
|
+
sparse_sum = coo_array(den_a) + coo_array(den_b)
|
556
|
+
assert_equal(dense_sum, sparse_sum.toarray())
|
557
|
+
|
558
|
+
|
559
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), [((7,), (12,)),
|
560
|
+
((6,4), (6,5)),
|
561
|
+
((5,9,3,2), (9,5,2,3)),])
|
562
|
+
def test_nd_add_sparse_with_inconsistent_shapes(a_shape, b_shape):
|
563
|
+
rng = np.random.default_rng(23409823)
|
564
|
+
|
565
|
+
arr_a = random_array((a_shape), density=0.6, rng=rng, dtype=int)
|
566
|
+
arr_b = random_array((b_shape), density=0.6, rng=rng, dtype=int)
|
567
|
+
with pytest.raises(ValueError, match="inconsistent shapes"):
|
568
|
+
arr_a + arr_b
|
569
|
+
|
570
|
+
|
571
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
572
|
+
(1,0,3), (7,9,3,2,4,5)])
|
573
|
+
def test_nd_sub_dense(shape):
|
574
|
+
rng = np.random.default_rng(23409823)
|
575
|
+
sp_x = random_array(shape, density=0.6, rng=rng, dtype=int)
|
576
|
+
sp_y = random_array(shape, density=0.6, rng=rng, dtype=int)
|
577
|
+
den_x, den_y = sp_x.toarray(), sp_y.toarray()
|
578
|
+
exp = den_x - den_y
|
579
|
+
res = sp_x - den_y
|
580
|
+
assert type(res) is type(exp)
|
581
|
+
assert_equal(res, exp)
|
582
|
+
|
583
|
+
|
584
|
+
@pytest.mark.parametrize('shape', [(0,), (7,), (4,7), (0,0,0), (3,6,2),
|
585
|
+
(1,0,3), (7,9,3,2,4,5)])
|
586
|
+
def test_nd_sub_sparse(shape):
|
587
|
+
rng = np.random.default_rng(23409823)
|
588
|
+
|
589
|
+
sp_x = random_array(shape, density=0.6, rng=rng, dtype=int)
|
590
|
+
sp_y = random_array(shape, density=0.6, rng=rng, dtype=int)
|
591
|
+
den_x, den_y = sp_x.toarray(), sp_y.toarray()
|
592
|
+
|
593
|
+
dense_sum = den_x - den_y
|
594
|
+
sparse_sum = sp_x - sp_y
|
595
|
+
assert_equal(dense_sum, sparse_sum.toarray())
|
596
|
+
|
597
|
+
|
598
|
+
def test_nd_sub_sparse_with_nan():
|
599
|
+
# subtraction of sparse arrays with a nan element
|
600
|
+
den_a = np.array([[[0], [np.nan]], [[-3], [0]]])
|
601
|
+
den_b = np.array([[[0], [1]], [[2], [3]]])
|
602
|
+
dense_sum = den_a - den_b
|
603
|
+
sparse_sum = coo_array(den_a) - coo_array(den_b)
|
604
|
+
assert_equal(dense_sum, sparse_sum.toarray())
|
605
|
+
|
606
|
+
|
607
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), [((7,), (12,)),
|
608
|
+
((6,4), (6,5)),
|
609
|
+
((5,9,3,2), (9,5,2,3)),])
|
610
|
+
def test_nd_sub_sparse_with_inconsistent_shapes(a_shape, b_shape):
|
611
|
+
rng = np.random.default_rng(23409823)
|
612
|
+
|
613
|
+
arr_a = random_array((a_shape), density=0.6, rng=rng, dtype=int)
|
614
|
+
arr_b = random_array((b_shape), density=0.6, rng=rng, dtype=int)
|
615
|
+
with pytest.raises(ValueError, match="inconsistent shapes"):
|
616
|
+
arr_a - arr_b
|
617
|
+
|
618
|
+
|
619
|
+
mat_vec_shapes = [
|
620
|
+
((2, 3, 4, 5), (5,)),
|
621
|
+
((0, 0), (0,)),
|
622
|
+
((2, 3, 4, 7, 8), (8,)),
|
623
|
+
((4, 4, 2, 0), (0,)),
|
624
|
+
((6, 5, 3, 2, 4), (4, 1)),
|
625
|
+
((2,5), (5,)),
|
626
|
+
((2, 5), (5, 1)),
|
627
|
+
((3,), (3, 1)),
|
628
|
+
((4,), (4,))
|
629
|
+
]
|
630
|
+
@pytest.mark.parametrize(('mat_shape', 'vec_shape'), mat_vec_shapes)
|
631
|
+
def test_nd_matmul_vector(mat_shape, vec_shape):
|
632
|
+
rng = np.random.default_rng(23409823)
|
633
|
+
|
634
|
+
sp_x = random_array(mat_shape, density=0.6, rng=rng, dtype=int)
|
635
|
+
sp_y = random_array(vec_shape, density=0.6, rng=rng, dtype=int)
|
636
|
+
den_x, den_y = sp_x.toarray(), sp_y.toarray()
|
637
|
+
exp = den_x @ den_y
|
638
|
+
res = sp_x @ den_y
|
639
|
+
assert_equal(res,exp)
|
640
|
+
res = sp_x @ list(den_y)
|
641
|
+
assert_equal(res,exp)
|
642
|
+
|
643
|
+
|
644
|
+
mat_mat_shapes = [
|
645
|
+
((2, 3, 4, 5), (2, 3, 5, 7)),
|
646
|
+
((0, 0), (0,)),
|
647
|
+
((4, 4, 2, 0), (0,)),
|
648
|
+
((7, 8, 3), (3,)),
|
649
|
+
((7, 8, 3), (3, 1)),
|
650
|
+
((6, 5, 3, 2, 4), (4, 3)),
|
651
|
+
((1, 3, 2, 4), (6, 5, 1, 4, 3)),
|
652
|
+
((6, 1, 1, 2, 4), (1, 3, 4, 3)),
|
653
|
+
((4,), (2, 4, 3)),
|
654
|
+
((3,), (5, 6, 7, 3, 2)),
|
655
|
+
((4,), (4, 3)),
|
656
|
+
((2, 5), (5, 1)),
|
657
|
+
]
|
658
|
+
@pytest.mark.parametrize(('mat_shape1', 'mat_shape2'), mat_mat_shapes)
|
659
|
+
def test_nd_matmul(mat_shape1, mat_shape2):
|
660
|
+
rng = np.random.default_rng(23409823)
|
661
|
+
|
662
|
+
sp_x = random_array(mat_shape1, density=0.6, random_state=rng, dtype=int)
|
663
|
+
sp_y = random_array(mat_shape2, density=0.6, random_state=rng, dtype=int)
|
664
|
+
den_x, den_y = sp_x.toarray(), sp_y.toarray()
|
665
|
+
exp = den_x @ den_y
|
666
|
+
# sparse-sparse
|
667
|
+
res = sp_x @ sp_y
|
668
|
+
assert_equal(res.toarray(), exp)
|
669
|
+
# sparse-dense
|
670
|
+
res = sp_x @ den_y
|
671
|
+
assert_equal(res, exp)
|
672
|
+
res = sp_x @ list(den_y)
|
673
|
+
assert_equal(res, exp)
|
674
|
+
|
675
|
+
# dense-sparse
|
676
|
+
res = den_x @ sp_y
|
677
|
+
assert_equal(res, exp)
|
678
|
+
|
679
|
+
|
680
|
+
def test_nd_matmul_sparse_with_inconsistent_arrays():
|
681
|
+
rng = np.random.default_rng(23409823)
|
682
|
+
|
683
|
+
sp_x = random_array((4,5,7,6,3), density=0.6, random_state=rng, dtype=int)
|
684
|
+
sp_y = random_array((1,5,3,2,5), density=0.6, random_state=rng, dtype=int)
|
685
|
+
with pytest.raises(ValueError, match="matmul: dimension mismatch with signature"):
|
686
|
+
sp_x @ sp_y
|
687
|
+
with pytest.raises(ValueError, match="matmul: dimension mismatch with signature"):
|
688
|
+
sp_x @ (sp_y.toarray())
|
689
|
+
|
690
|
+
sp_z = random_array((1,5,3,2), density=0.6, random_state=rng, dtype=int)
|
691
|
+
with pytest.raises(ValueError, match="Batch dimensions are not broadcastable"):
|
692
|
+
sp_x @ sp_z
|
693
|
+
with pytest.raises(ValueError, match="Batch dimensions are not broadcastable"):
|
694
|
+
sp_x @ (sp_z.toarray())
|
695
|
+
|
696
|
+
|
697
|
+
def test_dot_1d_1d(): # 1-D inner product
|
698
|
+
a = coo_array([1,2,3])
|
699
|
+
b = coo_array([4,5,6])
|
700
|
+
exp = np.dot(a.toarray(), b.toarray())
|
701
|
+
res = a.dot(b)
|
702
|
+
assert_equal(res, exp)
|
703
|
+
res = a.dot(b.toarray())
|
704
|
+
assert_equal(res, exp)
|
705
|
+
|
706
|
+
|
707
|
+
def test_dot_sparse_scalar():
|
708
|
+
a = coo_array([[1, 2], [3, 4], [5, 6]])
|
709
|
+
b = 3
|
710
|
+
res = a.dot(b)
|
711
|
+
exp = np.dot(a.toarray(), b)
|
712
|
+
assert_equal(res.toarray(), exp)
|
713
|
+
|
714
|
+
|
715
|
+
def test_dot_with_inconsistent_shapes():
|
716
|
+
arr_a = coo_array([[[1, 2]], [[3, 4]]])
|
717
|
+
arr_b = coo_array([4, 5, 6])
|
718
|
+
with pytest.raises(ValueError, match="not aligned for n-D dot"):
|
719
|
+
arr_a.dot(arr_b)
|
720
|
+
|
721
|
+
|
722
|
+
def test_matmul_dot_not_implemented():
|
723
|
+
arr_a = coo_array([[1, 2], [3, 4]])
|
724
|
+
with pytest.raises(TypeError, match="argument not supported type"):
|
725
|
+
arr_a.dot(None)
|
726
|
+
with pytest.raises(TypeError, match="arg not supported type"):
|
727
|
+
arr_a.tensordot(None)
|
728
|
+
with pytest.raises(TypeError, match="unsupported operand type"):
|
729
|
+
arr_a @ None
|
730
|
+
with pytest.raises(TypeError, match="unsupported operand type"):
|
731
|
+
None @ arr_a
|
732
|
+
|
733
|
+
|
734
|
+
dot_shapes = [
|
735
|
+
((3,3), (3,3)), ((4,6), (6,7)), ((1,4), (4,1)), # matrix multiplication 2-D
|
736
|
+
((3,2,4,7), (7,)), ((5,), (6,3,5,2)), # dot of n-D and 1-D arrays
|
737
|
+
((3,2,4,7), (7,1)), ((1,5,), (6,3,5,2)),
|
738
|
+
((4,6), (3,2,6,4)), ((2,8,7), (4,5,7,7,2)), # dot of n-D and m-D arrays
|
739
|
+
((4,5,7,6), (3,2,6,4)),
|
740
|
+
]
|
741
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), dot_shapes)
|
742
|
+
def test_dot_nd(a_shape, b_shape):
|
743
|
+
rng = np.random.default_rng(23409823)
|
744
|
+
|
745
|
+
arr_a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
746
|
+
arr_b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
747
|
+
|
748
|
+
exp = np.dot(arr_a.toarray(), arr_b.toarray())
|
749
|
+
# sparse-dense
|
750
|
+
res = arr_a.dot(arr_b.toarray())
|
751
|
+
assert_equal(res, exp)
|
752
|
+
res = arr_a.dot(list(arr_b.toarray()))
|
753
|
+
assert_equal(res, exp)
|
754
|
+
# sparse-sparse
|
755
|
+
res = arr_a.dot(arr_b)
|
756
|
+
assert_equal(res.toarray(), exp)
|
757
|
+
|
758
|
+
|
759
|
+
tensordot_shapes_and_axes = [
|
760
|
+
((4,6), (6,7), ([1], [0])),
|
761
|
+
((3,2,4,7), (7,), ([3], [0])),
|
762
|
+
((5,), (6,3,5,2), ([0], [2])),
|
763
|
+
((4,5,7,6), (3,2,6,4), ([0, 3], [3, 2])),
|
764
|
+
((2,8,7), (4,5,7,8,2), ([0, 1, 2], [4, 3, 2])),
|
765
|
+
((4,5,3,2,6), (3,2,6,7,8), 3),
|
766
|
+
((4,5,7), (7,3,7), 1),
|
767
|
+
((2,3,4), (2,3,4), ([0, 1, 2], [0, 1, 2])),
|
768
|
+
]
|
769
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape', 'axes'), tensordot_shapes_and_axes)
|
770
|
+
def test_tensordot(a_shape, b_shape, axes):
|
771
|
+
rng = np.random.default_rng(23409823)
|
772
|
+
|
773
|
+
arr_a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
774
|
+
arr_b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
775
|
+
|
776
|
+
exp = np.tensordot(arr_a.toarray(), arr_b.toarray(), axes=axes)
|
777
|
+
|
778
|
+
# sparse-dense
|
779
|
+
res = arr_a.tensordot(arr_b.toarray(), axes=axes)
|
780
|
+
assert_equal(res, exp)
|
781
|
+
res = arr_a.tensordot(list(arr_b.toarray()), axes=axes)
|
782
|
+
assert_equal(res, exp)
|
783
|
+
|
784
|
+
# sparse-sparse
|
785
|
+
res = arr_a.tensordot(arr_b, axes=axes)
|
786
|
+
if type(res) is coo_array:
|
787
|
+
assert_equal(res.toarray(), exp)
|
788
|
+
else:
|
789
|
+
assert_equal(res, exp)
|
790
|
+
|
791
|
+
|
792
|
+
def test_tensordot_with_invalid_args():
|
793
|
+
rng = np.random.default_rng(23409823)
|
794
|
+
|
795
|
+
arr_a = random_array((3,4,5), density=0.6, random_state=rng, dtype=int)
|
796
|
+
arr_b = random_array((3,4,6), density=0.6, random_state=rng, dtype=int)
|
797
|
+
|
798
|
+
axes = ([2], [2]) # sizes of 2nd axes of both shapes do not match
|
799
|
+
with pytest.raises(ValueError, match="sizes of the corresponding axes must match"):
|
800
|
+
arr_a.tensordot(arr_b, axes=axes)
|
801
|
+
|
802
|
+
arr_a = random_array((5,4,2,3,7), density=0.6, random_state=rng, dtype=int)
|
803
|
+
arr_b = random_array((4,6,3,2), density=0.6, random_state=rng, dtype=int)
|
804
|
+
|
805
|
+
axes = ([2,0,1], [1,3]) # lists have different lengths
|
806
|
+
with pytest.raises(ValueError, match="axes lists/tuples must be of the"
|
807
|
+
" same length"):
|
808
|
+
arr_a.tensordot(arr_b, axes=axes)
|
809
|
+
|
810
|
+
|
811
|
+
@pytest.mark.parametrize(('actual_shape', 'broadcast_shape'),
|
812
|
+
[((1,3,5,4), (2,3,5,4)), ((2,1,5,4), (6,2,3,5,4)),
|
813
|
+
((1,1,7,8,9), (4,5,6,7,8,9)), ((1,3), (4,5,3)),
|
814
|
+
((7,8,1), (7,8,5)), ((3,1), (3,4)), ((1,), (5,)),
|
815
|
+
((1,1,1), (4,5,6)), ((1,3,1,5,4), (8,2,3,9,5,4)),])
|
816
|
+
def test_broadcast_to(actual_shape, broadcast_shape):
|
817
|
+
rng = np.random.default_rng(23409823)
|
818
|
+
|
819
|
+
arr = random_array(actual_shape, density=0.6, random_state=rng, dtype=int)
|
820
|
+
res = arr._broadcast_to(broadcast_shape)
|
821
|
+
exp = np.broadcast_to(arr.toarray(), broadcast_shape)
|
822
|
+
assert_equal(res.toarray(), exp)
|
823
|
+
|
824
|
+
|
825
|
+
@pytest.mark.parametrize(('shape'), [(4,5,6,7,8), (6,4),
|
826
|
+
(5,9,3,2), (9,5,2,3,4),])
|
827
|
+
def test_block_diag(shape):
|
828
|
+
rng = np.random.default_rng(23409823)
|
829
|
+
sp_x = random_array(shape, density=0.6, random_state=rng, dtype=int)
|
830
|
+
den_x = sp_x.toarray()
|
831
|
+
|
832
|
+
# converting n-d numpy array to an array of slices of 2-D matrices,
|
833
|
+
# to pass as argument into scipy.linalg.block_diag
|
834
|
+
num_slices = int(np.prod(den_x.shape[:-2]))
|
835
|
+
reshaped_array = den_x.reshape((num_slices,) + den_x.shape[-2:])
|
836
|
+
matrices = [reshaped_array[i, :, :] for i in range(num_slices)]
|
837
|
+
exp = block_diag(*matrices)
|
838
|
+
|
839
|
+
res = _block_diag(sp_x)
|
840
|
+
|
841
|
+
assert_equal(res.toarray(), exp)
|
842
|
+
|
843
|
+
|
844
|
+
@pytest.mark.parametrize(('shape'), [(4,5,6,7,8), (6,4),
|
845
|
+
(5,9,3,2), (9,5,2,3,4),])
|
846
|
+
def test_extract_block_diag(shape):
|
847
|
+
rng = np.random.default_rng(23409823)
|
848
|
+
sp_x = random_array(shape, density=0.6, random_state=rng, dtype=int)
|
849
|
+
res = _extract_block_diag(_block_diag(sp_x), shape)
|
850
|
+
|
851
|
+
assert_equal(res.toarray(), sp_x.toarray())
|
852
|
+
|
853
|
+
|
854
|
+
add_sub_shapes = [
|
855
|
+
((3,4), (3,4)), ((3,4,6), (3,4,6)), ((3,7,5), (3,7,5))
|
856
|
+
]
|
857
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), add_sub_shapes)
|
858
|
+
def test_add_no_broadcasting(a_shape, b_shape):
|
859
|
+
rng = np.random.default_rng(23409823)
|
860
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
861
|
+
b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
862
|
+
|
863
|
+
res = a + b
|
864
|
+
exp = np.add(a.toarray(), b.toarray())
|
865
|
+
assert_equal(res.toarray(), exp)
|
866
|
+
res = a + b.toarray()
|
867
|
+
assert_equal(res, exp)
|
868
|
+
|
869
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), add_sub_shapes)
|
870
|
+
def test_sub_no_broadcasting(a_shape, b_shape):
|
871
|
+
rng = np.random.default_rng(23409823)
|
872
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
873
|
+
b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
874
|
+
|
875
|
+
res = a - b
|
876
|
+
exp = np.subtract(a.toarray(), b.toarray())
|
877
|
+
assert_equal(res.toarray(), exp)
|
878
|
+
|
879
|
+
res = a - b.toarray()
|
880
|
+
assert_equal(res, exp)
|
881
|
+
|
882
|
+
argmax_argmin_shapes_axis = [
|
883
|
+
((3,), None), ((3,), 0),
|
884
|
+
((4,6), 1), ((7,3), 0), ((3,5), None),
|
885
|
+
((2,8,7), 2), ((2,8,7), 0),
|
886
|
+
((2,0), 0), ((3,0,0,2), 0),
|
887
|
+
((3,2,4,7), None), ((3,2,4,7), 1), ((3,2,4,7), 0), ((3,2,4,7), 2),
|
888
|
+
((3,2,4,7), -2), ((4,5,7,8,2), 4), ((4,5,7,8,2), -3),
|
889
|
+
]
|
890
|
+
@pytest.mark.parametrize(('shape', 'axis'), argmax_argmin_shapes_axis)
|
891
|
+
def test_argmax_argmin(shape, axis):
|
892
|
+
rng = np.random.default_rng(23409823)
|
893
|
+
a = random_array(shape, density=0.6, random_state=rng, dtype=int)
|
894
|
+
|
895
|
+
res = a.argmax(axis=axis)
|
896
|
+
exp = np.argmax(a.toarray(), axis=axis)
|
897
|
+
assert_equal(res, exp)
|
898
|
+
|
899
|
+
res = a.argmin(axis=axis)
|
900
|
+
exp = np.argmin(a.toarray(), axis=axis)
|
901
|
+
assert_equal(res, exp)
|
902
|
+
|
903
|
+
|
904
|
+
max_min_shapes_axis = [
|
905
|
+
((3,), None), ((3,), 0),
|
906
|
+
((4,6), 1), ((7,3), 0), ((3,5), None),
|
907
|
+
((2,8,7), 2), ((2,8,7), 0),
|
908
|
+
((3,2,4,7), None), ((3,2,4,7), 1), ((3,2,4,7), 0), ((3,2,4,7), 2),
|
909
|
+
((4,5,7,8,2), 4), ((4,5,8,1), 3), ((4,6), (0,)), ((4,6), (0,1)),
|
910
|
+
((3,0,2), 2), ((3,0,2), (0,2)), ((3,0), 0),
|
911
|
+
((3,7,8,5), (0,1)), ((3,7,8,5), (2,1)), ((3,7,8,5), (2,0)),
|
912
|
+
((3,7,8,5), (0,-2)), ((3,7,8,5), (-1,2)), ((3,7,8,5), (3)),
|
913
|
+
((3,7,8,5), (0,1,2)), ((3,7,8,5), (0,1,2,3)),
|
914
|
+
]
|
915
|
+
@pytest.mark.parametrize(('shape', 'axis'), max_min_shapes_axis)
|
916
|
+
def test_min_max(shape, axis):
|
917
|
+
rng = np.random.default_rng(23409823)
|
918
|
+
a = random_array(shape, density=0.6, random_state=rng, dtype=int)
|
919
|
+
|
920
|
+
res_min = a.min(axis=axis)
|
921
|
+
exp_min = np.min(a.toarray(), axis=axis)
|
922
|
+
res_max = a.max(axis=axis)
|
923
|
+
exp_max = np.max(a.toarray(), axis=axis)
|
924
|
+
res_nanmin = a.nanmin(axis=axis)
|
925
|
+
exp_nanmin = np.nanmin(a.toarray(), axis=axis)
|
926
|
+
res_nanmax = a.nanmax(axis=axis)
|
927
|
+
exp_nanmax = np.nanmax(a.toarray(), axis=axis)
|
928
|
+
|
929
|
+
for res, exp in [(res_min, exp_min), (res_max, exp_max),
|
930
|
+
(res_nanmin, exp_nanmin), (res_nanmax, exp_nanmax)]:
|
931
|
+
if np.issubdtype(type(res), np.number):
|
932
|
+
assert_equal(res, exp)
|
933
|
+
else:
|
934
|
+
assert_equal(res.toarray(), exp)
|
935
|
+
|
936
|
+
|
937
|
+
def test_min_max_full():
|
938
|
+
for a in (coo_array([[[1, 2, 3, 4]]]), coo_array([[1, 2, 3, 4]])):
|
939
|
+
assert a.min() == 1
|
940
|
+
assert (-a).max() == -1
|
941
|
+
|
942
|
+
|
943
|
+
sum_mean_params = [
|
944
|
+
((3,), None, None), ((3,), 0, None),
|
945
|
+
((4,6), 1, None), ((7,3), 0, None), ((3,5), None, None),
|
946
|
+
((2,8,7), 2, None), ((2,8,7), 0, np.zeros((8,7))),
|
947
|
+
((3,2,4,7), None, None), ((3,2,4,7), 1, np.zeros((3,4,7))),
|
948
|
+
((3,2,4,7), 0, None), ((4,5,7,8,2), 4, None),
|
949
|
+
((4,5,8,1), 3, None), ((4,6), (0,), None), ((4,6), (0,1), None),
|
950
|
+
((3,0,2), 2, None), ((3,0,2), (0,2), None), ((3,0), 0, None),
|
951
|
+
((3,7,8,5), (0,1), np.zeros((8,5))), ((3,7,8,5), (2,1), None),
|
952
|
+
((3,7,8,5), (0,-2), None), ((3,7,8,5), (-1,2), np.zeros((3,7))),
|
953
|
+
((3,7,8,5), (3), None), ((3,7,8,5), (0,1,2), np.zeros((5,))),
|
954
|
+
((3,7,8,5), (0,1,2,3), None),
|
955
|
+
]
|
956
|
+
@pytest.mark.parametrize(('shape', 'axis', 'out'), sum_mean_params)
|
957
|
+
def test_sum(shape, axis, out):
|
958
|
+
rng = np.random.default_rng(23409823)
|
959
|
+
a = random_array(shape, density=0.6, random_state=rng, dtype=int)
|
960
|
+
|
961
|
+
res = a.sum(axis=axis, out=out)
|
962
|
+
exp = np.sum(a.toarray(), axis=axis)
|
963
|
+
assert_equal(res, exp)
|
964
|
+
if out is not None:
|
965
|
+
assert_equal(out, exp)
|
966
|
+
assert id(res) == id(out)
|
967
|
+
|
968
|
+
|
969
|
+
@pytest.mark.parametrize(('shape', 'axis', 'out'), sum_mean_params)
|
970
|
+
def test_mean(shape, axis, out):
|
971
|
+
rng = np.random.default_rng(23409823)
|
972
|
+
a = random_array(shape, density=0.6, random_state=rng, dtype=int)
|
973
|
+
|
974
|
+
res = a.mean(axis=axis, out=out)
|
975
|
+
exp = np.mean(a.toarray(), axis=axis)
|
976
|
+
assert_allclose(res, exp)
|
977
|
+
if out is not None:
|
978
|
+
assert id(res) == id(out)
|
979
|
+
assert_allclose(out, exp)
|
980
|
+
|
981
|
+
|
982
|
+
def test_pow_abs_round():
|
983
|
+
rng = np.random.default_rng(23409823)
|
984
|
+
a = random_array((3,6,5,2,4), density=0.6, random_state=rng, dtype=int)
|
985
|
+
assert_allclose((a**3).toarray(), np.power(a.toarray(), 3))
|
986
|
+
assert_allclose((a**7).toarray(), np.power(a.toarray(), 7))
|
987
|
+
assert_allclose(round(a).toarray(), np.round(a.toarray()))
|
988
|
+
assert_allclose(abs(a).toarray(), np.abs(a.toarray()))
|
989
|
+
|
990
|
+
|
991
|
+
#bitwise_op_and_compare_broadcast_shapes = [
|
992
|
+
# ((3,4), (3,4)), ((1,4), (2,1)), ((3,5), (1,)), ((1,), (7,8)),
|
993
|
+
# ((3,4,6), (3,4,6)), ((4,3), (2,1,3)), ((2,1,3), (4,3)),
|
994
|
+
# ((3,5,4), (1,)), ((1,), (7,8,4)), ((16,1,6), (2,6)), ((3,7,5), (3,7,5)),
|
995
|
+
# ((16,2,6), (1,2,6)), ((7,8), (5,7,8)), ((4,5,1), (5,1)),
|
996
|
+
# ((6,8,3), (4,1,1,3)), ((1,1,1), (3,4,2)), ((3,4,2), (1,1,1,1,1)),
|
997
|
+
bitwise_op_and_compare_shapes = [
|
998
|
+
((3,4), (3,4)), ((3,4,6), (3,4,6)), ((3,7,5), (3,7,5)),
|
999
|
+
]
|
1000
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), bitwise_op_and_compare_shapes)
|
1001
|
+
def test_boolean_comparisons(a_shape, b_shape):
|
1002
|
+
rng = np.random.default_rng(23409823)
|
1003
|
+
sup = suppress_warnings()
|
1004
|
+
sup.filter(SparseEfficiencyWarning)
|
1005
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
1006
|
+
b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
1007
|
+
with sup:
|
1008
|
+
assert_equal((a==b).toarray(), a.toarray()==b.toarray())
|
1009
|
+
assert_equal((a!=b).toarray(), a.toarray()!=b.toarray())
|
1010
|
+
assert_equal((a>=b).toarray(), a.toarray()>=b.toarray())
|
1011
|
+
assert_equal((a<=b).toarray(), a.toarray()<=b.toarray())
|
1012
|
+
assert_equal((a>b).toarray(), a.toarray()>b.toarray())
|
1013
|
+
assert_equal((a<b).toarray(), a.toarray()<b.toarray())
|
1014
|
+
assert_equal((a==b).toarray(), np.bitwise_not((a!=b).toarray()))
|
1015
|
+
assert_equal((a>=b).toarray(), np.bitwise_not((a<b).toarray()))
|
1016
|
+
assert_equal((a<=b).toarray(), np.bitwise_not((a>b).toarray()))
|
1017
|
+
|
1018
|
+
|
1019
|
+
def test_boolean_comparisons_with_scalar():
|
1020
|
+
rng = np.random.default_rng(23409823)
|
1021
|
+
sup = suppress_warnings()
|
1022
|
+
sup.filter(SparseEfficiencyWarning)
|
1023
|
+
a = random_array((5,4,8,7), density=0.6, random_state=rng, dtype=int)
|
1024
|
+
with sup:
|
1025
|
+
assert_equal((a==0).toarray(), a.toarray()==0)
|
1026
|
+
assert_equal((a!=0).toarray(), a.toarray()!=0)
|
1027
|
+
assert_equal((a>=1).toarray(), a.toarray()>=1)
|
1028
|
+
assert_equal((a<=1).toarray(), a.toarray()<=1)
|
1029
|
+
assert_equal((a>0).toarray(), a.toarray()>0)
|
1030
|
+
assert_equal((a<0).toarray(), a.toarray()<0)
|
1031
|
+
|
1032
|
+
|
1033
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), bitwise_op_and_compare_shapes)
|
1034
|
+
def test_multiply(a_shape, b_shape):
|
1035
|
+
rng = np.random.default_rng(23409823)
|
1036
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
1037
|
+
b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
1038
|
+
res = a * b
|
1039
|
+
exp = np.multiply(a.toarray(), b.toarray())
|
1040
|
+
assert_equal(res.toarray(), exp)
|
1041
|
+
|
1042
|
+
|
1043
|
+
def test_multiply_with_scalar():
|
1044
|
+
rng = np.random.default_rng(23409823)
|
1045
|
+
a = random_array((3,5,4), density=0.6, random_state=rng, dtype=int)
|
1046
|
+
res = a * 7
|
1047
|
+
exp = np.multiply(a.toarray(), 7)
|
1048
|
+
assert_equal(res.toarray(), exp)
|
1049
|
+
|
1050
|
+
|
1051
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), bitwise_op_and_compare_shapes)
|
1052
|
+
def test_divide(a_shape, b_shape):
|
1053
|
+
rng = np.random.default_rng(23409823)
|
1054
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
1055
|
+
b = np.arange(1, 1 + math.prod(b_shape)).reshape(b_shape)
|
1056
|
+
res = a / b
|
1057
|
+
exp = a.toarray() / b
|
1058
|
+
assert_allclose(res.toarray(), exp)
|
1059
|
+
|
1060
|
+
res = a / b
|
1061
|
+
assert_allclose(res.toarray(), exp)
|
1062
|
+
|
1063
|
+
|
1064
|
+
def test_divide_with_scalar():
|
1065
|
+
rng = np.random.default_rng(23409823)
|
1066
|
+
a = random_array((3,5,4), density=0.6, random_state=rng, dtype=int)
|
1067
|
+
res = a / 7
|
1068
|
+
exp = a.toarray() / 7
|
1069
|
+
assert_allclose(res.toarray(), exp)
|
1070
|
+
|
1071
|
+
|
1072
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), bitwise_op_and_compare_shapes)
|
1073
|
+
def test_maximum(a_shape, b_shape):
|
1074
|
+
rng = np.random.default_rng(23409823)
|
1075
|
+
sup = suppress_warnings()
|
1076
|
+
sup.filter(SparseEfficiencyWarning)
|
1077
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
1078
|
+
b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
1079
|
+
with sup:
|
1080
|
+
res = a.maximum(b)
|
1081
|
+
exp = np.maximum(a.toarray(), b.toarray())
|
1082
|
+
assert_equal(res.toarray(), exp)
|
1083
|
+
|
1084
|
+
@pytest.mark.parametrize(('a_shape', 'b_shape'), bitwise_op_and_compare_shapes)
|
1085
|
+
def test_minimum(a_shape, b_shape):
|
1086
|
+
rng = np.random.default_rng(23409823)
|
1087
|
+
sup = suppress_warnings()
|
1088
|
+
sup.filter(SparseEfficiencyWarning)
|
1089
|
+
a = random_array(a_shape, density=0.6, random_state=rng, dtype=int)
|
1090
|
+
b = random_array(b_shape, density=0.6, random_state=rng, dtype=int)
|
1091
|
+
with sup:
|
1092
|
+
res = a.minimum(b)
|
1093
|
+
exp = np.minimum(a.toarray(), b.toarray())
|
1094
|
+
assert_equal(res.toarray(), exp)
|
1095
|
+
|
1096
|
+
|
1097
|
+
def test_maximum_with_scalar():
|
1098
|
+
sup = suppress_warnings()
|
1099
|
+
sup.filter(SparseEfficiencyWarning)
|
1100
|
+
a = coo_array([0,1,6])
|
1101
|
+
b = coo_array([[15, 0], [14, 5], [0, -12]])
|
1102
|
+
c = coo_array([[[[3,0], [2,4]], [[8,9], [-3,12]]],
|
1103
|
+
[[[5,2], [3,0]], [[0,7], [0,-6]]]])
|
1104
|
+
with sup:
|
1105
|
+
assert_equal(a.maximum(5).toarray(), np.maximum(a.toarray(), 5))
|
1106
|
+
assert_equal(b.maximum(9).toarray(), np.maximum(b.toarray(), 9))
|
1107
|
+
assert_equal(c.maximum(5).toarray(), np.maximum(c.toarray(), 5))
|
1108
|
+
|
1109
|
+
def test_minimum_with_scalar():
|
1110
|
+
sup = suppress_warnings()
|
1111
|
+
sup.filter(SparseEfficiencyWarning)
|
1112
|
+
a = coo_array([0,1,6])
|
1113
|
+
b = coo_array([[15, 0], [14, 5], [0, -12]])
|
1114
|
+
c = coo_array([[[[3,0], [2,4]], [[8,9], [-3,12]]],
|
1115
|
+
[[[5,2], [3,0]], [[0,7], [0,-6]]]])
|
1116
|
+
with sup:
|
1117
|
+
assert_equal(a.minimum(5).toarray(), np.minimum(a.toarray(), 5))
|
1118
|
+
assert_equal(b.minimum(9).toarray(), np.minimum(b.toarray(), 9))
|
1119
|
+
assert_equal(c.minimum(5).toarray(), np.minimum(c.toarray(), 5))
|