qwen-sci 0.2.2__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- qwen_sci-0.2.2.dist-info/METADATA +492 -0
- qwen_sci-0.2.2.dist-info/RECORD +549 -0
- qwen_sci-0.2.2.dist-info/WHEEL +4 -0
- qwen_sci-0.2.2.dist-info/entry_points.txt +6 -0
- qwen_sci-0.2.2.dist-info/licenses/LICENSE +21 -0
- src/1.txt +1 -0
- src/__init__.py +1 -0
- src/__main__.py +5 -0
- src/agents/__init__.py +1 -0
- src/agents/experiment_design_agent/__init__.py +268 -0
- src/agents/experiment_design_agent/artifacts.py +747 -0
- src/agents/experiment_design_agent/cache.py +319 -0
- src/agents/experiment_design_agent/completeness.py +130 -0
- src/agents/experiment_design_agent/contracts.py +771 -0
- src/agents/experiment_design_agent/counterexample_analyzer.py +187 -0
- src/agents/experiment_design_agent/design_evidence_paper_screener.py +470 -0
- src/agents/experiment_design_agent/discipline_catalog.py +178 -0
- src/agents/experiment_design_agent/evidence_cards.py +338 -0
- src/agents/experiment_design_agent/evidence_planner.py +452 -0
- src/agents/experiment_design_agent/formal_reasoning_planner.py +884 -0
- src/agents/experiment_design_agent/fulltext_acquisition.py +863 -0
- src/agents/experiment_design_agent/idea_adapter.py +100 -0
- src/agents/experiment_design_agent/idea_intake.py +87 -0
- src/agents/experiment_design_agent/llm_json.py +328 -0
- src/agents/experiment_design_agent/orchestrator.py +1220 -0
- src/agents/experiment_design_agent/reasoning_context.py +183 -0
- src/agents/experiment_design_agent/reasoning_validation.py +546 -0
- src/agents/experiment_design_agent/run.py +481 -0
- src/agents/experiment_design_agent/run_logging.py +292 -0
- src/agents/experiment_design_agent/scope_gate.py +198 -0
- src/agents/experiment_design_agent/study_type_composer.py +1360 -0
- src/agents/experiment_design_agent/survey_evidence.py +1381 -0
- src/agents/experiment_design_agent/template_router.py +195 -0
- src/agents/experiment_design_agent/variable_claim_extractor.py +93 -0
- src/agents/idea_agent/__init__.py +1 -0
- src/agents/idea_agent/agent/__init__.py +6 -0
- src/agents/idea_agent/agent/artifacts.py +308 -0
- src/agents/idea_agent/agent/base.py +122 -0
- src/agents/idea_agent/agent/ligagent.py +488 -0
- src/agents/idea_agent/agent/mcts.py +2060 -0
- src/agents/idea_agent/agent/prompts/__init__.py +48 -0
- src/agents/idea_agent/agent/prompts/advanced_analysis.py +235 -0
- src/agents/idea_agent/agent/prompts/algorithm_alignment.py +55 -0
- src/agents/idea_agent/agent/prompts/algorithm_structuring.py +48 -0
- src/agents/idea_agent/agent/prompts/component_extraction.py +62 -0
- src/agents/idea_agent/agent/prompts/component_novelty_evaluation.py +54 -0
- src/agents/idea_agent/agent/prompts/experiment_findings_extraction.py +39 -0
- src/agents/idea_agent/agent/prompts/idea_fusion.py +295 -0
- src/agents/idea_agent/agent/prompts/idea_introduction.py +30 -0
- src/agents/idea_agent/agent/prompts/idea_result_alignment.py +39 -0
- src/agents/idea_agent/agent/prompts/input_interpreter.py +52 -0
- src/agents/idea_agent/agent/prompts/keynote_ops.py +78 -0
- src/agents/idea_agent/agent/prompts/mcts_evaluation.py +235 -0
- src/agents/idea_agent/agent/prompts/mcts_generation.py +140 -0
- src/agents/idea_agent/agent/prompts/mechanism_commit_query.py +99 -0
- src/agents/idea_agent/agent/prompts/memory_selection.py +0 -0
- src/agents/idea_agent/agent/prompts/prompt_modes.py +16 -0
- src/agents/idea_agent/agent/prompts/rag_query.py +34 -0
- src/agents/idea_agent/agent/prompts/re_analysis_replan.py +48 -0
- src/agents/idea_agent/agent/prompts/reference_grounding.py +34 -0
- src/agents/idea_agent/agent/prompts/root_domain_classification.py +32 -0
- src/agents/idea_agent/agent/prompts/scientific_debate.py +88 -0
- src/agents/idea_agent/agent/prompts/scientific_materialization.py +45 -0
- src/agents/idea_agent/agent/prompts/skill_instantiation.py +193 -0
- src/agents/idea_agent/agent/prompts/theory_transfer_query.py +93 -0
- src/agents/idea_agent/agent/prompts/topic_background.py +15 -0
- src/agents/idea_agent/agent/skills/DEFAULT_SKILL_TEMPLATES.json +263 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/alternative-path-contrast/SKILL.md +40 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/alternative-path-contrast/references/contrast_patterns.md +22 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/feedback-closed-loop/SKILL.md +40 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/feedback-closed-loop/references/mechanism_cards.md +24 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/hierarchical-decomposition/SKILL.md +39 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/hierarchical-decomposition/references/hierarchy_patterns.md +22 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/mechanism-commit-innovation/SKILL.md +39 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/mechanism-commit-innovation/references/mechanism_commit_patterns.md +24 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/multi-scale-coordinator/SKILL.md +39 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/multi-scale-coordinator/references/coordination_patterns.md +22 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/speculative-execution-with-repair/SKILL.md +41 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/speculative-execution-with-repair/references/speculation_patterns.md +22 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/surgical-modularity/SKILL.md +39 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/surgical-modularity/references/modularity_patterns.md +22 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/theory-transfer-injection/SKILL.md +40 -0
- src/agents/idea_agent/agent/skills/edit_operator_skills/theory-transfer-injection/references/transfer_patterns.md +24 -0
- src/agents/idea_agent/example/idea_result.json +900 -0
- src/agents/idea_agent/run.py +276 -0
- src/agents/idea_agent/tests/test_advanced_analysis_contract.py +90 -0
- src/agents/idea_agent/tests/test_gap_hypothesis_bridge.py +166 -0
- src/agents/idea_agent/tests/test_idea_debate.py +480 -0
- src/agents/idea_agent/tests/test_idea_result_v5.py +99 -0
- src/agents/idea_agent/tests/test_idea_synthesis.py +92 -0
- src/agents/idea_agent/tests/test_mature_idea_sources.py +27 -0
- src/agents/idea_agent/tests/test_multimodal_idea_integration.py +386 -0
- src/agents/idea_agent/tests/test_profile_materialization_and_scoring.py +219 -0
- src/agents/idea_agent/tests/test_profile_native_skill_rendering.py +122 -0
- src/agents/idea_agent/tests/test_result_persistence.py +183 -0
- src/agents/idea_agent/tests/test_scientific_intervention_profiles.py +241 -0
- src/agents/idea_agent/tests/test_scientific_rubric_and_prompts.py +559 -0
- src/agents/idea_agent/tests/test_strict_json_object_responses.py +48 -0
- src/agents/idea_agent/utils/core/__init__.py +1 -0
- src/agents/idea_agent/utils/core/ablation_inputs.py +60 -0
- src/agents/idea_agent/utils/core/chat_errors.py +95 -0
- src/agents/idea_agent/utils/core/chat_router.py +130 -0
- src/agents/idea_agent/utils/core/chat_transport.py +188 -0
- src/agents/idea_agent/utils/core/config_loader.py +166 -0
- src/agents/idea_agent/utils/core/json_utils.py +28 -0
- src/agents/idea_agent/utils/core/logger.py +287 -0
- src/agents/idea_agent/utils/core/progress.py +58 -0
- src/agents/idea_agent/utils/core/response_parsing.py +57 -0
- src/agents/idea_agent/utils/core/run_inputs.py +198 -0
- src/agents/idea_agent/utils/mcts/__init__.py +1 -0
- src/agents/idea_agent/utils/mcts/component_novelty.py +342 -0
- src/agents/idea_agent/utils/mcts/defect_registry.py +302 -0
- src/agents/idea_agent/utils/mcts/idea_routes.py +61 -0
- src/agents/idea_agent/utils/mcts/idea_taste_presets.py +312 -0
- src/agents/idea_agent/utils/mcts/mcts_helpers.py +738 -0
- src/agents/idea_agent/utils/mcts/mcts_runtime.py +3000 -0
- src/agents/idea_agent/utils/mcts/scientific_intervention_ontology.py +1561 -0
- src/agents/idea_agent/utils/mcts/scientific_rubric.py +211 -0
- src/agents/idea_agent/utils/mcts/skill_parsing.py +92 -0
- src/agents/idea_agent/utils/papers/__init__.py +1 -0
- src/agents/idea_agent/utils/papers/paper_graph_vector_store.py +499 -0
- src/agents/idea_agent/utils/papers/paper_repository.py +372 -0
- src/agents/idea_agent/utils/prompting/__init__.py +1 -0
- src/agents/idea_agent/utils/prompting/prompt_views.py +637 -0
- src/agents/idea_agent/utils/workflow/__init__.py +1 -0
- src/agents/idea_agent/utils/workflow/advanced_analysis_contract.py +244 -0
- src/agents/idea_agent/utils/workflow/gap_hypothesis_bridge.py +461 -0
- src/agents/idea_agent/utils/workflow/idea_contract.py +426 -0
- src/agents/idea_agent/utils/workflow/idea_debate.py +1238 -0
- src/agents/idea_agent/utils/workflow/idea_diversity.py +163 -0
- src/agents/idea_agent/utils/workflow/idea_fusion.py +889 -0
- src/agents/idea_agent/utils/workflow/idea_helpers.py +478 -0
- src/agents/idea_agent/utils/workflow/idea_portfolio.py +422 -0
- src/agents/idea_agent/utils/workflow/idea_synthesis.py +482 -0
- src/agents/idea_agent/utils/workflow/ligagent_flow.py +581 -0
- src/agents/idea_agent/utils/workflow/ligagent_handlers.py +1836 -0
- src/agents/idea_agent/utils/workflow/ligagent_helpers.py +1331 -0
- src/agents/idea_agent/utils/workflow/ligagent_utils.py +322 -0
- src/agents/idea_agent/utils/workflow/mature_idea_sources.py +648 -0
- src/agents/idea_agent/utils/workflow/multimodal_data_anchoring.py +578 -0
- src/agents/idea_agent/utils/workflow/result_persistence.py +774 -0
- src/agents/idea_agent/utils/workflow/stage_contract.py +76 -0
- src/agents/idea_agent/utils/workflow/workflow_runtime.py +288 -0
- src/agents/research_plan_author/__init__.py +50 -0
- src/agents/research_plan_author/artifacts.py +270 -0
- src/agents/research_plan_author/authoring_blueprint.py +1246 -0
- src/agents/research_plan_author/bibtex_renderer.py +252 -0
- src/agents/research_plan_author/contract_repair.py +131 -0
- src/agents/research_plan_author/contracts.py +745 -0
- src/agents/research_plan_author/cross_section_editor.py +232 -0
- src/agents/research_plan_author/document_quality.py +987 -0
- src/agents/research_plan_author/idea_evolution.py +223 -0
- src/agents/research_plan_author/input_loader.py +76 -0
- src/agents/research_plan_author/latex_compiler.py +260 -0
- src/agents/research_plan_author/latex_safety.py +159 -0
- src/agents/research_plan_author/llm_json.py +74 -0
- src/agents/research_plan_author/markdown_renderer.py +275 -0
- src/agents/research_plan_author/pdf_validator.py +149 -0
- src/agents/research_plan_author/render.py +166 -0
- src/agents/research_plan_author/render_artifacts.py +187 -0
- src/agents/research_plan_author/run.py +765 -0
- src/agents/research_plan_author/run_logging.py +209 -0
- src/agents/research_plan_author/section_cache.py +184 -0
- src/agents/research_plan_author/section_composer.py +1764 -0
- src/agents/research_plan_author/section_router.py +209 -0
- src/agents/research_plan_author/semantic_validator.py +254 -0
- src/agents/research_plan_author/source_bundle.py +46 -0
- src/agents/research_plan_author/source_registry.py +208 -0
- src/agents/research_plan_author/survey_source_loader.py +137 -0
- src/agents/research_plan_author/template_adapter.py +173 -0
- src/agents/research_plan_author/template_profile.py +204 -0
- src/agents/research_plan_author/tex_renderer.py +496 -0
- src/agents/research_plan_author/theory_presentation.py +134 -0
- src/agents/research_plan_author/theory_spine.py +703 -0
- src/agents/survey_agent/Dockerfile +54 -0
- src/agents/survey_agent/README.md +350 -0
- src/agents/survey_agent/config/deep_survey.yaml +217 -0
- src/agents/survey_agent/config/deep_survey_batch.yaml +176 -0
- src/agents/survey_agent/config/deep_survey_fast.yaml +183 -0
- src/agents/survey_agent/config/evaluate_baseline.yaml +197 -0
- src/agents/survey_agent/config/outcomeRAG.yaml +159 -0
- src/agents/survey_agent/env_report.md +348 -0
- src/agents/survey_agent/modules/__init__.py +0 -0
- src/agents/survey_agent/modules/code_collector.py +2194 -0
- src/agents/survey_agent/modules/code_report_generator.py +1282 -0
- src/agents/survey_agent/modules/data_manager.py +1713 -0
- src/agents/survey_agent/modules/database.py +167 -0
- src/agents/survey_agent/modules/fulltext_download_cache.py +462 -0
- src/agents/survey_agent/modules/fulltext_http.py +134 -0
- src/agents/survey_agent/modules/fulltext_resolution.py +749 -0
- src/agents/survey_agent/modules/judge.py +434 -0
- src/agents/survey_agent/modules/outcome_RAG.py +236 -0
- src/agents/survey_agent/modules/paper_graph_retriever.py +1075 -0
- src/agents/survey_agent/modules/pe.py +1729 -0
- src/agents/survey_agent/modules/pseudo_creator.py +782 -0
- src/agents/survey_agent/modules/pseudo_reviser.py +537 -0
- src/agents/survey_agent/modules/refine_agent.py +1952 -0
- src/agents/survey_agent/modules/survey_generator.py +5691 -0
- src/agents/survey_agent/modules/survey_visualizer.py +1817 -0
- src/agents/survey_agent/modules/visual_prompts.py +327 -0
- src/agents/survey_agent/modules/work_analyzer.py +2750 -0
- src/agents/survey_agent/modules/work_collector.py +5649 -0
- src/agents/survey_agent/scripts/baseline_evaluation.py +411 -0
- src/agents/survey_agent/scripts/run_deep_survey.py +224 -0
- src/agents/survey_agent/scripts/run_deep_survey_adapter.py +407 -0
- src/agents/survey_agent/scripts/run_deep_survey_adapter_with_input.py +409 -0
- src/agents/survey_agent/scripts/run_deep_survey_batch.py +228 -0
- src/agents/survey_agent/scripts/run_deep_survey_batch_arg.py +243 -0
- src/agents/survey_agent/scripts/run_deep_survey_batch_settings.py +218 -0
- src/agents/survey_agent/scripts/run_keynotes_gen.py +128 -0
- src/agents/survey_agent/scripts/run_work_clusters.py +140 -0
- src/agents/survey_agent/utils/__init__.py +0 -0
- src/agents/survey_agent/utils/ablation_utils.py +317 -0
- src/agents/survey_agent/utils/api_call.py +2518 -0
- src/agents/survey_agent/utils/chat_utils.py +82 -0
- src/agents/survey_agent/utils/config_utils.py +70 -0
- src/agents/survey_agent/utils/convert_to_md.py +29 -0
- src/agents/survey_agent/utils/err_info.py +24 -0
- src/agents/survey_agent/utils/file_utils.py +176 -0
- src/agents/survey_agent/utils/gpu_utils.py +145 -0
- src/agents/survey_agent/utils/graph_visualizer.py +279 -0
- src/agents/survey_agent/utils/html_utils.py +181 -0
- src/agents/survey_agent/utils/latex_generator_intra_cluster.py +529 -0
- src/agents/survey_agent/utils/latex_generator_relation_table.py +193 -0
- src/agents/survey_agent/utils/mineru_section_packer.py +334 -0
- src/agents/survey_agent/utils/mineru_utils.py +396 -0
- src/agents/survey_agent/utils/paper.py +144 -0
- src/agents/survey_agent/utils/read_yaml.py +15 -0
- src/agents/survey_agent/utils/repo_utils.py +167 -0
- src/agents/survey_agent/utils/rich_logger.py +77 -0
- src/agents/survey_agent/utils/step2v2.py +874 -0
- src/agents/survey_agent/utils/step2v2_extractor.py +856 -0
- src/agents/survey_agent/utils/topic_survey_storage.py +309 -0
- src/agents/survey_agent/utils/utils.py +118 -0
- src/agents/survey_agent/utils/work.py +2 -0
- src/cli.py +1611 -0
- src/config/__init__.py +213 -0
- src/config/default.yaml +1122 -0
- src/harness/LICENSE +21 -0
- src/harness/VENDORED.md +14 -0
- src/harness/src/__init__.py +0 -0
- src/harness/src/openharness/__init__.py +0 -0
- src/harness/src/openharness/__main__.py +6 -0
- src/harness/src/openharness/api/__init__.py +21 -0
- src/harness/src/openharness/api/client.py +281 -0
- src/harness/src/openharness/api/codex_client.py +407 -0
- src/harness/src/openharness/api/copilot_auth.py +240 -0
- src/harness/src/openharness/api/copilot_client.py +134 -0
- src/harness/src/openharness/api/errors.py +19 -0
- src/harness/src/openharness/api/openai_client.py +577 -0
- src/harness/src/openharness/api/provider.py +186 -0
- src/harness/src/openharness/api/registry.py +437 -0
- src/harness/src/openharness/api/usage.py +17 -0
- src/harness/src/openharness/auth/__init__.py +29 -0
- src/harness/src/openharness/auth/external.py +610 -0
- src/harness/src/openharness/auth/flows.py +189 -0
- src/harness/src/openharness/auth/manager.py +482 -0
- src/harness/src/openharness/auth/storage.py +269 -0
- src/harness/src/openharness/autopilot/__init__.py +23 -0
- src/harness/src/openharness/autopilot/service.py +2239 -0
- src/harness/src/openharness/autopilot/types.py +91 -0
- src/harness/src/openharness/bridge/__init__.py +20 -0
- src/harness/src/openharness/bridge/manager.py +106 -0
- src/harness/src/openharness/bridge/session_runner.py +46 -0
- src/harness/src/openharness/bridge/types.py +37 -0
- src/harness/src/openharness/bridge/work_secret.py +41 -0
- src/harness/src/openharness/channels/UPSTREAM +6 -0
- src/harness/src/openharness/channels/__init__.py +22 -0
- src/harness/src/openharness/channels/adapter.py +131 -0
- src/harness/src/openharness/channels/bus/__init__.py +6 -0
- src/harness/src/openharness/channels/bus/events.py +38 -0
- src/harness/src/openharness/channels/bus/queue.py +44 -0
- src/harness/src/openharness/channels/impl/__init__.py +6 -0
- src/harness/src/openharness/channels/impl/base.py +141 -0
- src/harness/src/openharness/channels/impl/dingtalk.py +445 -0
- src/harness/src/openharness/channels/impl/discord.py +311 -0
- src/harness/src/openharness/channels/impl/email.py +410 -0
- src/harness/src/openharness/channels/impl/feishu.py +1342 -0
- src/harness/src/openharness/channels/impl/manager.py +257 -0
- src/harness/src/openharness/channels/impl/matrix.py +700 -0
- src/harness/src/openharness/channels/impl/mochat.py +897 -0
- src/harness/src/openharness/channels/impl/qq.py +141 -0
- src/harness/src/openharness/channels/impl/slack.py +284 -0
- src/harness/src/openharness/channels/impl/telegram.py +525 -0
- src/harness/src/openharness/channels/impl/whatsapp.py +159 -0
- src/harness/src/openharness/cli.py +2551 -0
- src/harness/src/openharness/commands/__init__.py +21 -0
- src/harness/src/openharness/commands/registry.py +2783 -0
- src/harness/src/openharness/config/__init__.py +34 -0
- src/harness/src/openharness/config/paths.py +160 -0
- src/harness/src/openharness/config/schema.py +119 -0
- src/harness/src/openharness/config/settings.py +1104 -0
- src/harness/src/openharness/coordinator/__init__.py +12 -0
- src/harness/src/openharness/coordinator/agent_definitions.py +975 -0
- src/harness/src/openharness/coordinator/coordinator_mode.py +520 -0
- src/harness/src/openharness/engine/__init__.py +80 -0
- src/harness/src/openharness/engine/cost_tracker.py +24 -0
- src/harness/src/openharness/engine/messages.py +222 -0
- src/harness/src/openharness/engine/query.py +1188 -0
- src/harness/src/openharness/engine/query_engine.py +313 -0
- src/harness/src/openharness/engine/stream_events.py +90 -0
- src/harness/src/openharness/hooks/__init__.py +50 -0
- src/harness/src/openharness/hooks/events.py +20 -0
- src/harness/src/openharness/hooks/executor.py +242 -0
- src/harness/src/openharness/hooks/hot_reload.py +31 -0
- src/harness/src/openharness/hooks/loader.py +68 -0
- src/harness/src/openharness/hooks/schemas.py +66 -0
- src/harness/src/openharness/hooks/types.py +38 -0
- src/harness/src/openharness/keybindings/__init__.py +14 -0
- src/harness/src/openharness/keybindings/default_bindings.py +11 -0
- src/harness/src/openharness/keybindings/loader.py +22 -0
- src/harness/src/openharness/keybindings/parser.py +18 -0
- src/harness/src/openharness/keybindings/resolver.py +13 -0
- src/harness/src/openharness/mcp/__init__.py +79 -0
- src/harness/src/openharness/mcp/client.py +298 -0
- src/harness/src/openharness/mcp/config.py +16 -0
- src/harness/src/openharness/mcp/types.py +76 -0
- src/harness/src/openharness/memory/__init__.py +25 -0
- src/harness/src/openharness/memory/agent.py +91 -0
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- src/harness/src/openharness/tools/glob_tool.py +175 -0
- src/harness/src/openharness/tools/grep_tool.py +374 -0
- src/harness/src/openharness/tools/image_generation_tool.py +447 -0
- src/harness/src/openharness/tools/image_to_text_tool.py +237 -0
- src/harness/src/openharness/tools/list_mcp_resources_tool.py +36 -0
- src/harness/src/openharness/tools/lsp_tool.py +154 -0
- src/harness/src/openharness/tools/mcp_auth_tool.py +71 -0
- src/harness/src/openharness/tools/mcp_tool.py +72 -0
- src/harness/src/openharness/tools/notebook_edit_tool.py +97 -0
- src/harness/src/openharness/tools/read_mcp_resource_tool.py +38 -0
- src/harness/src/openharness/tools/remote_trigger_tool.py +74 -0
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- src/harness/src/openharness/tools/skill_tool.py +43 -0
- src/harness/src/openharness/tools/sleep_tool.py +32 -0
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- src/research_run_ids.py +11 -0
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"""Render a validated English ResearchPlanDocument into a restricted TeX project."""
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+
keys.append(value)
|
|
106
|
+
return keys
|
|
107
|
+
|
|
108
|
+
|
|
109
|
+
def _citation_suffix(keys: list[str]) -> str:
|
|
110
|
+
return "" if not keys else "~\\cite{" + ",".join(keys) + "}"
|
|
111
|
+
|
|
112
|
+
|
|
113
|
+
def _paragraphs(text: str, *, label: str) -> str:
|
|
114
|
+
visible_text = _strip_private_survey_anchors(text)
|
|
115
|
+
fragments = [fragment.strip() for fragment in re.split(r"\n\s*\n", visible_text) if fragment.strip()]
|
|
116
|
+
if not fragments:
|
|
117
|
+
return ""
|
|
118
|
+
return "\n\n".join(escape_latex_text(fragment, label=label).replace("\n", " ") for fragment in fragments)
|
|
119
|
+
|
|
120
|
+
|
|
121
|
+
def _list_items(text: str, *, label: str) -> list[str]:
|
|
122
|
+
lines = [line.strip() for line in _strip_private_survey_anchors(text).splitlines() if line.strip()]
|
|
123
|
+
items = [re.sub(r"^(?:[-*+]|\d+[.)])\s*", "", line).strip() for line in lines]
|
|
124
|
+
return [escape_latex_text(item, label=label) for item in items if item]
|
|
125
|
+
|
|
126
|
+
|
|
127
|
+
def _render_table(text: str, *, label: str, caption: str, table_label: str) -> str:
|
|
128
|
+
rows: list[list[str]] = []
|
|
129
|
+
for line in (line.strip() for line in _strip_private_survey_anchors(text).splitlines() if line.strip()):
|
|
130
|
+
stripped = line.strip("|")
|
|
131
|
+
cells = [cell.strip() for cell in (stripped.split("|") if "|" in stripped else stripped.split("\t"))]
|
|
132
|
+
if len(cells) >= 2 and any(cells):
|
|
133
|
+
if all(re.fullmatch(r":?-{3,}:?", cell.replace(" ", "")) for cell in cells):
|
|
134
|
+
continue
|
|
135
|
+
rows.append(cells)
|
|
136
|
+
if not rows or len(rows) > 40:
|
|
137
|
+
return "\\begin{quote}\\small " + _paragraphs(text, label=label) + " \\end{quote}"
|
|
138
|
+
width = max(len(row) for row in rows)
|
|
139
|
+
if width > 6:
|
|
140
|
+
return "\\begin{quote}\\small " + _paragraphs(text, label=label) + " \\end{quote}"
|
|
141
|
+
normalized = [row + [""] * (width - len(row)) for row in rows]
|
|
142
|
+
longest_cell = max((len(cell) for row in normalized for cell in row), default=0)
|
|
143
|
+
use_wide_layout = width >= 4 or longest_cell > 52
|
|
144
|
+
environment = "table*" if use_wide_layout else "table"
|
|
145
|
+
available_width = r"\textwidth" if use_wide_layout else r"\linewidth"
|
|
146
|
+
if use_wide_layout:
|
|
147
|
+
column_width = f"{0.92 / width:.4f}".rstrip("0").rstrip(".")
|
|
148
|
+
else:
|
|
149
|
+
column_width = "0.45" if width == 2 else "0.29"
|
|
150
|
+
rendered_rows = [
|
|
151
|
+
" & ".join(escape_latex_text(cell, label=label) for cell in row) + r" \\\hline"
|
|
152
|
+
for row in normalized
|
|
153
|
+
]
|
|
154
|
+
return "\n".join(
|
|
155
|
+
[
|
|
156
|
+
"\\begin{" + environment + "}[htbp]",
|
|
157
|
+
"\\centering",
|
|
158
|
+
"\\footnotesize" if use_wide_layout else "\\small",
|
|
159
|
+
"\\setlength{\\tabcolsep}{3pt}" if use_wide_layout else "",
|
|
160
|
+
"\\renewcommand{\\arraystretch}{1.12}" if use_wide_layout else "",
|
|
161
|
+
"\\caption{" + escape_latex_text(caption, label=f"{label} caption") + "}",
|
|
162
|
+
"\\label{" + table_label + "}",
|
|
163
|
+
"\\begin{tabular}{|" + "|".join(
|
|
164
|
+
f"p{{{column_width}{available_width}}}" for _ in range(width)
|
|
165
|
+
) + "|}",
|
|
166
|
+
"\\hline",
|
|
167
|
+
*rendered_rows,
|
|
168
|
+
"\\end{tabular}",
|
|
169
|
+
"\\end{" + environment + "}",
|
|
170
|
+
]
|
|
171
|
+
)
|
|
172
|
+
|
|
173
|
+
|
|
174
|
+
def _equation_cross_references(
|
|
175
|
+
block: Mapping[str, Any],
|
|
176
|
+
*,
|
|
177
|
+
equation_labels: Mapping[str, str],
|
|
178
|
+
) -> str:
|
|
179
|
+
labels = [
|
|
180
|
+
equation_labels[reference_id]
|
|
181
|
+
for raw_reference_id in block.get("reference_block_ids") or []
|
|
182
|
+
if (reference_id := _text(raw_reference_id)) in equation_labels
|
|
183
|
+
]
|
|
184
|
+
if not labels:
|
|
185
|
+
return ""
|
|
186
|
+
rendered = ", ".join("Eq.~\\eqref{" + label + "}" for label in labels)
|
|
187
|
+
return " See " + rendered + "."
|
|
188
|
+
|
|
189
|
+
|
|
190
|
+
def _render_math_expression(expression: str, *, equation_label: str | None) -> str:
|
|
191
|
+
lines = [line.strip() for line in expression.split(r"\\")]
|
|
192
|
+
if len(lines) == 1:
|
|
193
|
+
if equation_label:
|
|
194
|
+
return "\\begin{equation}\n" + expression + "\n\\label{" + equation_label + "}\n\\end{equation}"
|
|
195
|
+
return "\\begin{equation*}\n" + expression + "\n\\end{equation*}"
|
|
196
|
+
if not all(lines):
|
|
197
|
+
raise LatexSafetyError("equation has an empty align row")
|
|
198
|
+
rendered_lines = [
|
|
199
|
+
line
|
|
200
|
+
+ (
|
|
201
|
+
r" \nonumber \\"
|
|
202
|
+
if index < len(lines) - 1
|
|
203
|
+
else (r" \label{" + equation_label + "}" if equation_label else "")
|
|
204
|
+
)
|
|
205
|
+
for index, line in enumerate(lines)
|
|
206
|
+
]
|
|
207
|
+
environment = "align" if equation_label else "align*"
|
|
208
|
+
return "\\begin{" + environment + "}\n" + "\n".join(rendered_lines) + "\n\\end{" + environment + "}"
|
|
209
|
+
|
|
210
|
+
|
|
211
|
+
def _render_equation(text: str, *, label: str, equation_label: str) -> str:
|
|
212
|
+
fragments = split_equation_content(_strip_private_survey_anchors(text), label=label)
|
|
213
|
+
rendered: list[str] = []
|
|
214
|
+
labeled_expression = False
|
|
215
|
+
for kind, fragment in fragments:
|
|
216
|
+
if kind == "prose":
|
|
217
|
+
prose = _paragraphs(fragment, label=label)
|
|
218
|
+
if prose:
|
|
219
|
+
rendered.append(prose)
|
|
220
|
+
continue
|
|
221
|
+
rendered.append(
|
|
222
|
+
_render_math_expression(
|
|
223
|
+
safe_math_expression(fragment, label=label),
|
|
224
|
+
equation_label=equation_label if not labeled_expression else None,
|
|
225
|
+
)
|
|
226
|
+
)
|
|
227
|
+
labeled_expression = True
|
|
228
|
+
if not labeled_expression:
|
|
229
|
+
raise LatexSafetyError(f"{label} contains no valid mathematical expression")
|
|
230
|
+
return "\n\n".join(rendered)
|
|
231
|
+
|
|
232
|
+
|
|
233
|
+
def _render_block(
|
|
234
|
+
block: Mapping[str, Any],
|
|
235
|
+
*,
|
|
236
|
+
claims: Mapping[str, Mapping[str, Any]],
|
|
237
|
+
document: Mapping[str, Any],
|
|
238
|
+
theory_registry: Mapping[str, Mapping[str, Any]],
|
|
239
|
+
section_id: str,
|
|
240
|
+
equation_labels: Mapping[str, str],
|
|
241
|
+
) -> str:
|
|
242
|
+
kind = _text(block.get("kind"))
|
|
243
|
+
text = normalize_visible_text(
|
|
244
|
+
_strip_private_survey_anchors(visible_theory_text(document, block.get("text"))),
|
|
245
|
+
label=f"block {block.get('block_id') or kind}",
|
|
246
|
+
)
|
|
247
|
+
citations = _citation_suffix(_block_citations(block, claims))
|
|
248
|
+
label = f"block {block.get('block_id') or kind}"
|
|
249
|
+
heading_text = _strip_private_survey_anchors(visible_theory_text(document, block.get("heading")))
|
|
250
|
+
heading = "" if not heading_text else "\\subsection{" + escape_latex_text(heading_text, label=f"{label} heading") + "}\n"
|
|
251
|
+
cross_references = _equation_cross_references(block, equation_labels=equation_labels)
|
|
252
|
+
theory_prefix, theory_status = theory_block_presentation(
|
|
253
|
+
block,
|
|
254
|
+
claims=claims,
|
|
255
|
+
registry=theory_registry,
|
|
256
|
+
)
|
|
257
|
+
if kind == "equation":
|
|
258
|
+
equation_label = _equation_label(section_id, block.get("block_id"))
|
|
259
|
+
return heading + _render_equation(text, label=label, equation_label=equation_label) + citations
|
|
260
|
+
if kind == "list":
|
|
261
|
+
items = _list_items(text, label=label)
|
|
262
|
+
if not items:
|
|
263
|
+
return ""
|
|
264
|
+
return heading + "\\begin{itemize}\n" + "\n".join(f"\\item {item}" for item in items) + "\n\\end{itemize}" + citations
|
|
265
|
+
if kind == "table":
|
|
266
|
+
caption = heading_text or theory_prefix.rstrip(".") or (
|
|
267
|
+
f"Decision matrix ({theory_status})" if theory_status else "Decision matrix"
|
|
268
|
+
)
|
|
269
|
+
return _render_table(
|
|
270
|
+
text,
|
|
271
|
+
label=label,
|
|
272
|
+
caption=caption,
|
|
273
|
+
table_label=_table_label(section_id, block.get("block_id")),
|
|
274
|
+
) + cross_references + citations
|
|
275
|
+
paragraph = _paragraphs(text, label=label)
|
|
276
|
+
if theory_prefix:
|
|
277
|
+
return heading + "\\paragraph{" + escape_latex_text(theory_prefix, label=f"{label} theory presentation") + "} " + paragraph + cross_references + citations
|
|
278
|
+
if kind == "definition":
|
|
279
|
+
return heading + "\\paragraph{Definition.} " + paragraph + cross_references + citations
|
|
280
|
+
if kind == "proposition":
|
|
281
|
+
return heading + "\\paragraph{Proposition (proposed).} " + paragraph + cross_references + citations
|
|
282
|
+
if kind == "protocol":
|
|
283
|
+
return heading + "\\paragraph{Planned protocol.} " + paragraph + cross_references + citations
|
|
284
|
+
if kind == "outcome_branch":
|
|
285
|
+
return heading + "\\paragraph{Conditional outcome branch.} " + paragraph + cross_references + citations
|
|
286
|
+
if kind == "review_checklist":
|
|
287
|
+
return heading + "\\paragraph{Human-review checklist.} " + paragraph + cross_references + citations
|
|
288
|
+
return heading + paragraph + cross_references + citations
|
|
289
|
+
|
|
290
|
+
|
|
291
|
+
def _render_section(
|
|
292
|
+
section: Mapping[str, Any],
|
|
293
|
+
*,
|
|
294
|
+
claims: Mapping[str, Mapping[str, Any]],
|
|
295
|
+
document: Mapping[str, Any],
|
|
296
|
+
theory_registry: Mapping[str, Mapping[str, Any]],
|
|
297
|
+
document_equation_labels: Mapping[str, str],
|
|
298
|
+
appendix: bool,
|
|
299
|
+
) -> str:
|
|
300
|
+
section_id = _text(section.get("section_id"))
|
|
301
|
+
title = escape_latex_text(
|
|
302
|
+
_strip_private_survey_anchors(visible_theory_text(document, section.get("title"))),
|
|
303
|
+
label=f"section {section_id} title",
|
|
304
|
+
)
|
|
305
|
+
heading = "\\section" if appendix else "\\section"
|
|
306
|
+
equation_labels = {
|
|
307
|
+
_text(block.get("block_id")): _equation_label(section_id, block.get("block_id"))
|
|
308
|
+
for block in section.get("blocks") or []
|
|
309
|
+
if isinstance(block, Mapping) and _text(block.get("kind")) == "equation"
|
|
310
|
+
}
|
|
311
|
+
equation_labels = {**document_equation_labels, **equation_labels}
|
|
312
|
+
blocks = [
|
|
313
|
+
_render_block(
|
|
314
|
+
_mapping(block),
|
|
315
|
+
claims=claims,
|
|
316
|
+
document=document,
|
|
317
|
+
theory_registry=theory_registry,
|
|
318
|
+
section_id=section_id,
|
|
319
|
+
equation_labels=equation_labels,
|
|
320
|
+
)
|
|
321
|
+
for block in section.get("blocks") or []
|
|
322
|
+
if isinstance(block, Mapping)
|
|
323
|
+
]
|
|
324
|
+
blocks = [block for block in blocks if block]
|
|
325
|
+
if _text(section.get("applicability")) == "not_applicable":
|
|
326
|
+
blocks.insert(0, "\\emph{Not applicable to this proposal.}")
|
|
327
|
+
if not blocks:
|
|
328
|
+
blocks.append("\\emph{No additional prose is available for this source-bounded proposal section.}")
|
|
329
|
+
return heading + "{" + title + "}\n" + "\n\n".join(blocks)
|
|
330
|
+
|
|
331
|
+
|
|
332
|
+
def _render_body(document: Mapping[str, Any], *, profile: TemplateProfile) -> str:
|
|
333
|
+
claims = _claim_map(document)
|
|
334
|
+
theory_registry = theory_unit_registry(document)
|
|
335
|
+
document_equation_labels = {
|
|
336
|
+
f"{_text(section.get('section_id'))}:{_text(block.get('block_id'))}": _equation_label(
|
|
337
|
+
section.get("section_id"),
|
|
338
|
+
block.get("block_id"),
|
|
339
|
+
)
|
|
340
|
+
for section in [*(document.get("sections") or []), *(document.get("appendices") or [])]
|
|
341
|
+
if isinstance(section, Mapping)
|
|
342
|
+
for block in section.get("blocks") or []
|
|
343
|
+
if isinstance(block, Mapping)
|
|
344
|
+
and _text(section.get("section_id"))
|
|
345
|
+
and _text(block.get("block_id"))
|
|
346
|
+
and _text(block.get("kind")) == "equation"
|
|
347
|
+
}
|
|
348
|
+
sections = [
|
|
349
|
+
_render_section(
|
|
350
|
+
_mapping(section),
|
|
351
|
+
claims=claims,
|
|
352
|
+
document=document,
|
|
353
|
+
theory_registry=theory_registry,
|
|
354
|
+
document_equation_labels=document_equation_labels,
|
|
355
|
+
appendix=False,
|
|
356
|
+
)
|
|
357
|
+
for section in document.get("sections") or []
|
|
358
|
+
if isinstance(section, Mapping) and _text(section.get("section_id")) != "references"
|
|
359
|
+
]
|
|
360
|
+
appendices = [
|
|
361
|
+
_render_section(
|
|
362
|
+
_mapping(section),
|
|
363
|
+
claims=claims,
|
|
364
|
+
document=document,
|
|
365
|
+
theory_registry=theory_registry,
|
|
366
|
+
document_equation_labels=document_equation_labels,
|
|
367
|
+
appendix=True,
|
|
368
|
+
)
|
|
369
|
+
for section in document.get("appendices") or []
|
|
370
|
+
if isinstance(section, Mapping)
|
|
371
|
+
]
|
|
372
|
+
if appendices:
|
|
373
|
+
appendix_command = "\\appendices" if profile.profile_id == "ieee_conference_v1" else "\\appendix"
|
|
374
|
+
sections.append(appendix_command + "\n" + "\n\n".join(appendices))
|
|
375
|
+
return "\n\n".join(sections)
|
|
376
|
+
|
|
377
|
+
|
|
378
|
+
def _render_abstract(document: Mapping[str, Any], *, profile: TemplateProfile) -> str:
|
|
379
|
+
abstract = _mapping(document.get("abstract"))
|
|
380
|
+
text = _paragraphs(
|
|
381
|
+
_strip_private_survey_anchors(visible_theory_text(document, abstract.get("text"))),
|
|
382
|
+
label="abstract",
|
|
383
|
+
)
|
|
384
|
+
if not text:
|
|
385
|
+
raise TexRenderError("ResearchPlanDocument has no rendered abstract")
|
|
386
|
+
keywords = [
|
|
387
|
+
escape_latex_text(_strip_private_survey_anchors(visible_theory_text(document, keyword)), label="keyword")
|
|
388
|
+
for keyword in document.get("keywords") or []
|
|
389
|
+
]
|
|
390
|
+
lines = ["\\begin{abstract}", text, "\\end{abstract}"]
|
|
391
|
+
if keywords and profile.profile_id == "ieee_conference_v1":
|
|
392
|
+
lines.extend(["\\begin{IEEEkeywords}", ", ".join(keywords), "\\end{IEEEkeywords}"])
|
|
393
|
+
elif keywords:
|
|
394
|
+
lines.append("\\paragraph{Keywords.} " + ", ".join(keywords))
|
|
395
|
+
return "\n".join(lines)
|
|
396
|
+
|
|
397
|
+
|
|
398
|
+
def _render_bibliography(result: BibtexRenderResult, *, profile: TemplateProfile) -> str:
|
|
399
|
+
if not result.emitted_keys:
|
|
400
|
+
return (
|
|
401
|
+
"\\section*{References}\n"
|
|
402
|
+
"\\emph{No provenance-backed bibliographic records are available for rendering; see the bibliography completion ledger.}"
|
|
403
|
+
)
|
|
404
|
+
database = Path(profile.generated_bib).with_suffix("").as_posix()
|
|
405
|
+
return "\n".join(
|
|
406
|
+
[
|
|
407
|
+
"\\section*{References}",
|
|
408
|
+
f"\\bibliographystyle{{{profile.bibliography_style}}}",
|
|
409
|
+
f"\\bibliography{{{database}}}",
|
|
410
|
+
]
|
|
411
|
+
)
|
|
412
|
+
|
|
413
|
+
|
|
414
|
+
def _write_text_atomically(path: Path, content: str) -> None:
|
|
415
|
+
temporary: Path | None = None
|
|
416
|
+
try:
|
|
417
|
+
path.parent.mkdir(parents=True, exist_ok=True)
|
|
418
|
+
descriptor, raw_path = tempfile.mkstemp(
|
|
419
|
+
prefix=f".{path.name}.", suffix=".tmp", dir=path.parent, text=True
|
|
420
|
+
)
|
|
421
|
+
temporary = Path(raw_path)
|
|
422
|
+
with os.fdopen(descriptor, "w", encoding="utf-8", newline="\n") as handle:
|
|
423
|
+
handle.write(content)
|
|
424
|
+
handle.flush()
|
|
425
|
+
os.fsync(handle.fileno())
|
|
426
|
+
os.replace(temporary, path)
|
|
427
|
+
except OSError as error:
|
|
428
|
+
raise TexRenderError(f"cannot write generated file '{path.name}': {error}") from error
|
|
429
|
+
finally:
|
|
430
|
+
if temporary is not None:
|
|
431
|
+
temporary.unlink(missing_ok=True)
|
|
432
|
+
|
|
433
|
+
|
|
434
|
+
def _validate_document(document: Mapping[str, Any]) -> None:
|
|
435
|
+
errors = validate_research_plan_document(document)
|
|
436
|
+
if errors:
|
|
437
|
+
raise TexRenderError("ResearchPlanDocument schema validation failed: " + "; ".join(errors))
|
|
438
|
+
if document.get("language") != AUTHORING_LANGUAGE:
|
|
439
|
+
raise TexRenderError("ResearchPlanDocument language must be English")
|
|
440
|
+
if document.get("document_status") != "PROPOSAL_NO_OBSERVED_RESULTS":
|
|
441
|
+
raise TexRenderError("only PROPOSAL_NO_OBSERVED_RESULTS documents may be rendered")
|
|
442
|
+
metadata = _mapping(document.get("document_metadata"))
|
|
443
|
+
normalize_visible_text(metadata.get("title"), label="document title")
|
|
444
|
+
|
|
445
|
+
|
|
446
|
+
def render_tex_project(
|
|
447
|
+
document: Mapping[str, Any],
|
|
448
|
+
*,
|
|
449
|
+
template_dir: str | Path,
|
|
450
|
+
project_dir: str | Path,
|
|
451
|
+
profile: TemplateProfile,
|
|
452
|
+
author_name: str = "Anonymous Research Plan Author",
|
|
453
|
+
) -> TexRenderResult:
|
|
454
|
+
"""Copy a declared template and render one source-bounded TeX project."""
|
|
455
|
+
|
|
456
|
+
try:
|
|
457
|
+
_validate_document(document)
|
|
458
|
+
bibliography = render_bibtex(document)
|
|
459
|
+
ensure_citation_coverage(document, bibliography)
|
|
460
|
+
title = escape_latex_text(
|
|
461
|
+
visible_theory_text(document, _mapping(document.get("document_metadata")).get("title")),
|
|
462
|
+
label="document title",
|
|
463
|
+
)
|
|
464
|
+
author = escape_latex_text(author_name, label="author name")
|
|
465
|
+
abstract = _render_abstract(document, profile=profile)
|
|
466
|
+
body = _render_body(document, profile=profile)
|
|
467
|
+
bibliography_fragment = _render_bibliography(bibliography, profile=profile)
|
|
468
|
+
except (LatexSafetyError, TemplateAdapterError) as error:
|
|
469
|
+
raise TexRenderError(str(error)) from error
|
|
470
|
+
adapter = TemplateAdapter()
|
|
471
|
+
try:
|
|
472
|
+
materialized: MaterializedTemplate = adapter.materialize(template_dir, project_dir, profile)
|
|
473
|
+
_write_text_atomically(materialized.generated_bib, bibliography.content)
|
|
474
|
+
main_tex = adapter.apply(
|
|
475
|
+
materialized,
|
|
476
|
+
profile,
|
|
477
|
+
{
|
|
478
|
+
"title": "\\title{" + title + "}",
|
|
479
|
+
"author": "\\author{" + author + "}",
|
|
480
|
+
"abstract": abstract,
|
|
481
|
+
"body": body,
|
|
482
|
+
"bibliography": bibliography_fragment,
|
|
483
|
+
},
|
|
484
|
+
)
|
|
485
|
+
except (TemplateAdapterError, LatexSafetyError) as error:
|
|
486
|
+
raise TexRenderError(str(error)) from error
|
|
487
|
+
return TexRenderResult(
|
|
488
|
+
profile_id=profile.profile_id,
|
|
489
|
+
project_dir=materialized.project_dir,
|
|
490
|
+
main_tex=main_tex,
|
|
491
|
+
bibtex=materialized.generated_bib,
|
|
492
|
+
bibliography=bibliography,
|
|
493
|
+
)
|
|
494
|
+
|
|
495
|
+
|
|
496
|
+
__all__ = ["TEX_RENDER_SCHEMA_VERSION", "TexRenderError", "TexRenderResult", "render_tex_project"]
|
|
@@ -0,0 +1,134 @@
|
|
|
1
|
+
"""Deterministic public presentation for compiled mathematics-theory units."""
|
|
2
|
+
|
|
3
|
+
from __future__ import annotations
|
|
4
|
+
|
|
5
|
+
from collections.abc import Mapping
|
|
6
|
+
from typing import Any
|
|
7
|
+
|
|
8
|
+
from .theory_spine import replace_theory_spine_internal_ids, theory_spine_internal_ids_in_text
|
|
9
|
+
|
|
10
|
+
|
|
11
|
+
_STATUS_LABELS = {
|
|
12
|
+
"proposed": "Candidate",
|
|
13
|
+
"candidate": "Candidate",
|
|
14
|
+
"unverified": "Unverified",
|
|
15
|
+
"expected_not_observed": "Expected---Not Observed",
|
|
16
|
+
"no_information": "No-information",
|
|
17
|
+
"needs_human_input": "Review-required",
|
|
18
|
+
"review_required": "Review-required",
|
|
19
|
+
}
|
|
20
|
+
|
|
21
|
+
|
|
22
|
+
def _mapping(value: object) -> dict[str, Any]:
|
|
23
|
+
return dict(value) if isinstance(value, Mapping) else {}
|
|
24
|
+
|
|
25
|
+
|
|
26
|
+
def _text(value: object) -> str:
|
|
27
|
+
return str(value or "").strip()
|
|
28
|
+
|
|
29
|
+
|
|
30
|
+
def theory_spine_for_document(document: Mapping[str, Any]) -> dict[str, Any]:
|
|
31
|
+
"""Resolve the private spine registry retained with a composed document."""
|
|
32
|
+
|
|
33
|
+
direct = _mapping(document.get("theory_spine"))
|
|
34
|
+
if direct:
|
|
35
|
+
return direct
|
|
36
|
+
return _mapping(_mapping(document.get("authoring_blueprint")).get("theory_spine"))
|
|
37
|
+
|
|
38
|
+
|
|
39
|
+
def visible_theory_text(document: Mapping[str, Any], value: object) -> str:
|
|
40
|
+
"""Use public display labels if a private theory ID reaches a renderer."""
|
|
41
|
+
|
|
42
|
+
visible = replace_theory_spine_internal_ids(value, theory_spine_for_document(document))
|
|
43
|
+
for private_identifier in theory_spine_internal_ids_in_text(visible):
|
|
44
|
+
visible = visible.replace(private_identifier, "an internal theory reference")
|
|
45
|
+
return visible
|
|
46
|
+
|
|
47
|
+
|
|
48
|
+
def theory_unit_registry(document: Mapping[str, Any]) -> dict[str, dict[str, Any]]:
|
|
49
|
+
"""Index compiled units by private ID for deterministic public labels."""
|
|
50
|
+
|
|
51
|
+
spine = theory_spine_for_document(document)
|
|
52
|
+
registry: dict[str, dict[str, Any]] = {}
|
|
53
|
+
for collection, identifier_field, unit_kind in (
|
|
54
|
+
("lemma_units", "lemma_id", "lemma"),
|
|
55
|
+
("proof_obligations", "proof_obligation_id", "proof_obligation"),
|
|
56
|
+
("falsifiers", "falsifier_id", "falsifier"),
|
|
57
|
+
("decision_branches", "branch_id", "decision_branch"),
|
|
58
|
+
):
|
|
59
|
+
for raw_record in spine.get(collection) or []:
|
|
60
|
+
record = _mapping(raw_record)
|
|
61
|
+
identifier = _text(record.get(identifier_field))
|
|
62
|
+
if identifier:
|
|
63
|
+
registry[identifier] = {"unit_kind": unit_kind, **record}
|
|
64
|
+
return registry
|
|
65
|
+
|
|
66
|
+
|
|
67
|
+
def _status_label(
|
|
68
|
+
block: Mapping[str, Any],
|
|
69
|
+
claims: Mapping[str, Mapping[str, Any]],
|
|
70
|
+
units: list[Mapping[str, Any]],
|
|
71
|
+
) -> str:
|
|
72
|
+
if any(_text(unit.get("branch_kind")) in {"no_information", "compiler_no_information"} for unit in units):
|
|
73
|
+
return "No-information"
|
|
74
|
+
statuses = {_text(unit.get("status")) for unit in units if _text(unit.get("status"))}
|
|
75
|
+
for status in ("no_information", "expected_not_observed", "candidate", "unverified"):
|
|
76
|
+
if status in statuses:
|
|
77
|
+
return _STATUS_LABELS[status]
|
|
78
|
+
qualifications = {
|
|
79
|
+
_text(_mapping(claims.get(_text(claim_id))).get("qualification"))
|
|
80
|
+
for claim_id in block.get("claim_ids") or []
|
|
81
|
+
if _text(claim_id)
|
|
82
|
+
}
|
|
83
|
+
for qualification in (
|
|
84
|
+
"expected_not_observed",
|
|
85
|
+
"needs_human_input",
|
|
86
|
+
"review_required",
|
|
87
|
+
"proposed",
|
|
88
|
+
"unverified",
|
|
89
|
+
):
|
|
90
|
+
if qualification in qualifications:
|
|
91
|
+
return _STATUS_LABELS[qualification]
|
|
92
|
+
return ""
|
|
93
|
+
|
|
94
|
+
|
|
95
|
+
def theory_block_presentation(
|
|
96
|
+
block: Mapping[str, Any],
|
|
97
|
+
*,
|
|
98
|
+
claims: Mapping[str, Mapping[str, Any]],
|
|
99
|
+
registry: Mapping[str, Mapping[str, Any]],
|
|
100
|
+
) -> tuple[str, str]:
|
|
101
|
+
"""Return the public prefix and status label for one structured block."""
|
|
102
|
+
|
|
103
|
+
units = [
|
|
104
|
+
_mapping(registry.get(_text(unit_id)))
|
|
105
|
+
for unit_id in block.get("theory_unit_ids") or []
|
|
106
|
+
if _mapping(registry.get(_text(unit_id)))
|
|
107
|
+
]
|
|
108
|
+
status = _status_label(block, claims, units)
|
|
109
|
+
unit_kinds = {_text(unit.get("unit_kind")) for unit in units}
|
|
110
|
+
labels = [_text(unit.get("display_label")) for unit in units if _text(unit.get("display_label"))]
|
|
111
|
+
label_text = ", ".join(dict.fromkeys(labels))
|
|
112
|
+
kind = _text(block.get("kind"))
|
|
113
|
+
if kind == "lemma":
|
|
114
|
+
noun = "Lemma" if len(labels) == 1 else "Lemma Registry"
|
|
115
|
+
return f"{noun}{(' ' + label_text) if label_text else ''}{(' (' + status + ')') if status else ''}.", status
|
|
116
|
+
if "proof_obligation" in unit_kinds:
|
|
117
|
+
noun = "Proof Obligation" if len(labels) == 1 else "Proof Obligation Registry"
|
|
118
|
+
return f"{noun}{(' ' + label_text) if label_text else ''}{(' (' + (status or 'Unverified') + ')')}.", status or "Unverified"
|
|
119
|
+
if kind == "outcome_branch" or "decision_branch" in unit_kinds:
|
|
120
|
+
branch_status = status or "Expected---Not Observed"
|
|
121
|
+
if branch_status == "No-information":
|
|
122
|
+
return "Decision Status: No-information.", branch_status
|
|
123
|
+
return f"Pre-registered Branch ({branch_status}).", branch_status
|
|
124
|
+
if kind == "proposition":
|
|
125
|
+
return f"Proposition ({status or 'Candidate'}).", status or "Candidate"
|
|
126
|
+
return "", status
|
|
127
|
+
|
|
128
|
+
|
|
129
|
+
__all__ = [
|
|
130
|
+
"theory_block_presentation",
|
|
131
|
+
"theory_spine_for_document",
|
|
132
|
+
"theory_unit_registry",
|
|
133
|
+
"visible_theory_text",
|
|
134
|
+
]
|