endoreg-db 0.3.6__py3-none-any.whl → 0.3.7__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- endoreg_db/admin.py +3 -3
- endoreg_db/apps.py +6 -6
- endoreg_db/data/__init__.py +67 -64
- endoreg_db/data/active_model/data.yaml +2 -2
- endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +167 -167
- endoreg_db/data/case_template/rule/01_patient-set-age.yaml +7 -7
- endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +8 -8
- endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +22 -22
- endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +18 -18
- endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +18 -18
- endoreg_db/data/case_template/rule/19_create_patient.yaml +16 -16
- endoreg_db/data/case_template/rule_type/base_types.yaml +35 -35
- endoreg_db/data/case_template/rule_value_type/base_types.yaml +58 -58
- endoreg_db/data/case_template/template/base.yaml +7 -7
- endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +2 -2
- endoreg_db/data/case_template/tmp/_rule_value +13 -13
- endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +21 -21
- endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +9 -9
- endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +6 -6
- endoreg_db/data/center/data.yaml +59 -59
- endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +144 -144
- endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +48 -48
- endoreg_db/data/disease/cardiovascular.yaml +37 -37
- endoreg_db/data/disease/hepatology.yaml +4 -4
- endoreg_db/data/disease/misc.yaml +5 -5
- endoreg_db/data/disease/renal.yaml +4 -4
- endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +5 -5
- endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +5 -5
- endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +40 -40
- endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +19 -19
- endoreg_db/data/distribution/date/patient.yaml +6 -6
- endoreg_db/data/distribution/single_categorical/patient.yaml +6 -6
- endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +132 -132
- endoreg_db/data/endoscope_type/data.yaml +10 -10
- endoreg_db/data/endoscopy_processor/data.yaml +45 -45
- endoreg_db/data/event/cardiology.yaml +27 -27
- endoreg_db/data/event/neurology.yaml +13 -13
- endoreg_db/data/event/surgery.yaml +12 -12
- endoreg_db/data/event/thrombembolism.yaml +19 -19
- endoreg_db/data/examination/examinations/data.yaml +65 -65
- endoreg_db/data/examination/time/data.yaml +47 -47
- endoreg_db/data/examination/time-type/data.yaml +7 -7
- endoreg_db/data/examination/type/data.yaml +5 -5
- endoreg_db/data/gender/data.yaml +18 -18
- endoreg_db/data/information_source/data.yaml +30 -30
- endoreg_db/data/information_source/medication.yaml +5 -5
- endoreg_db/data/lab_value/cardiac_enzymes.yaml +30 -30
- endoreg_db/data/lab_value/coagulation.yaml +48 -48
- endoreg_db/data/lab_value/electrolytes.yaml +189 -189
- endoreg_db/data/lab_value/gastrointestinal_function.yaml +121 -121
- endoreg_db/data/lab_value/hematology.yaml +169 -169
- endoreg_db/data/lab_value/hormones.yaml +53 -53
- endoreg_db/data/lab_value/lipids.yaml +44 -44
- endoreg_db/data/lab_value/misc.yaml +30 -30
- endoreg_db/data/lab_value/renal_function.yaml +10 -10
- endoreg_db/data/label/label/data.yaml +62 -62
- endoreg_db/data/label/label-set/data.yaml +17 -17
- endoreg_db/data/label/label-type/data.yaml +6 -6
- endoreg_db/data/medication/anticoagulation.yaml +64 -64
- endoreg_db/data/medication/tah.yaml +69 -69
- endoreg_db/data/medication_indication/anticoagulation.yaml +120 -120
- endoreg_db/data/medication_indication_type/data.yaml +10 -10
- endoreg_db/data/medication_indication_type/thrombembolism.yaml +40 -40
- endoreg_db/data/medication_intake_time/base.yaml +30 -30
- endoreg_db/data/medication_schedule/apixaban.yaml +94 -94
- endoreg_db/data/medication_schedule/ass.yaml +12 -12
- endoreg_db/data/medication_schedule/enoxaparin.yaml +26 -26
- endoreg_db/data/model_type/data.yaml +6 -6
- endoreg_db/data/network_device/data.yaml +17 -0
- endoreg_db/data/network_device_type/data.yaml +8 -0
- endoreg_db/data/patient_lab_sample_type/generic.yaml +5 -5
- endoreg_db/data/pdf_type/data.yaml +28 -28
- endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +66 -66
- endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +33 -33
- endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +308 -308
- endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +88 -88
- endoreg_db/data/profession/data.yaml +70 -70
- endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +55 -55
- endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +26 -26
- endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +19 -19
- endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +15 -15
- endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +12 -12
- endoreg_db/data/unit/concentration.yaml +92 -92
- endoreg_db/data/unit/data.yaml +17 -17
- endoreg_db/data/unit/length.yaml +30 -30
- endoreg_db/data/unit/misc.yaml +19 -19
- endoreg_db/data/unit/rate.yaml +5 -5
- endoreg_db/data/unit/time.yaml +12 -12
- endoreg_db/data/unit/volume.yaml +35 -35
- endoreg_db/data/unit/weight.yaml +37 -37
- endoreg_db/data/waste/data.yaml +11 -11
- endoreg_db/forms/__init__.py +2 -2
- endoreg_db/forms/questionnaires/tto_questionnaire.py +23 -23
- endoreg_db/forms/settings/__init__.py +8 -8
- endoreg_db/forms/unit.py +5 -5
- endoreg_db/management/commands/_load_model_template.py +40 -40
- endoreg_db/management/commands/delete_all.py +18 -18
- endoreg_db/management/commands/delete_legacy_images.py +19 -19
- endoreg_db/management/commands/delete_legacy_videos.py +16 -16
- endoreg_db/management/commands/extract_legacy_video_frames.py +18 -18
- endoreg_db/management/commands/fetch_legacy_image_dataset.py +32 -32
- endoreg_db/management/commands/fix_auth_permission.py +20 -20
- endoreg_db/management/commands/import_legacy_images.py +94 -94
- endoreg_db/management/commands/import_legacy_videos.py +76 -76
- endoreg_db/management/commands/load_active_model_data.py +44 -44
- endoreg_db/management/commands/load_ai_model_data.py +44 -44
- endoreg_db/management/commands/load_base_db_data.py +132 -128
- endoreg_db/management/commands/load_center_data.py +42 -42
- endoreg_db/management/commands/load_disease_classification_choices_data.py +40 -40
- endoreg_db/management/commands/load_disease_classification_data.py +40 -40
- endoreg_db/management/commands/load_disease_data.py +39 -39
- endoreg_db/management/commands/load_distribution_data.py +65 -65
- endoreg_db/management/commands/load_endoscope_type_data.py +44 -44
- endoreg_db/management/commands/load_endoscopy_processor_data.py +44 -44
- endoreg_db/management/commands/load_event_data.py +40 -40
- endoreg_db/management/commands/load_examination_data.py +74 -74
- endoreg_db/management/commands/load_g_play_data.py +112 -112
- endoreg_db/management/commands/load_gender_data.py +43 -43
- endoreg_db/management/commands/load_green_endoscopy_wuerzburg_data.py +132 -132
- endoreg_db/management/commands/load_information_source.py +44 -44
- endoreg_db/management/commands/load_lab_value_data.py +49 -49
- endoreg_db/management/commands/load_label_data.py +66 -66
- endoreg_db/management/commands/load_medication_data.py +40 -40
- endoreg_db/management/commands/load_medication_indication_data.py +62 -62
- endoreg_db/management/commands/load_medication_indication_type_data.py +40 -40
- endoreg_db/management/commands/load_medication_intake_time_data.py +40 -40
- endoreg_db/management/commands/load_medication_schedule_data.py +54 -54
- endoreg_db/management/commands/load_network_data.py +49 -0
- endoreg_db/management/commands/load_pdf_type_data.py +60 -60
- endoreg_db/management/commands/load_profession_data.py +43 -43
- endoreg_db/management/commands/load_report_reader_flag.py +45 -45
- endoreg_db/management/commands/load_unit_data.py +45 -45
- endoreg_db/management/commands/load_user_groups.py +28 -28
- endoreg_db/management/commands/register_ai_model.py +65 -65
- endoreg_db/management/commands/reset_celery_schedule.py +9 -9
- endoreg_db/migrations/0001_initial.py +582 -582
- endoreg_db/migrations/0002_rawvideofile.py +26 -26
- endoreg_db/migrations/0003_rawvideofile_frames_required.py +18 -18
- endoreg_db/migrations/0004_rename_hash_rawvideofile_video_hash.py +18 -18
- endoreg_db/migrations/0005_ffmpegmeta_remove_videoimportmeta_center_and_more.py +56 -56
- endoreg_db/migrations/0006_rawvideofile_center_alter_videometa_processor.py +25 -25
- endoreg_db/migrations/0007_rawvideofile_processor.py +19 -19
- endoreg_db/migrations/0008_rename_frames_required_rawvideofile_state_frames_required.py +18 -18
- endoreg_db/migrations/0009_sensitivemeta_rawvideofile_sensitive_meta.py +31 -31
- endoreg_db/migrations/0010_rename_endoscope_serial_number_sensitivemeta_endoscope_sn.py +18 -18
- endoreg_db/migrations/0011_rawvideofile_state_sensitive_data_retrieved.py +18 -18
- endoreg_db/migrations/0012_rawvideofile_prediction_dir_and_more.py +109 -109
- endoreg_db/migrations/0013_rawpdffile.py +31 -31
- endoreg_db/migrations/0014_pdftype_alter_rawpdffile_file_pdfmeta.py +38 -38
- endoreg_db/migrations/0015_rename_report_processed_rawpdffile_state_report_processed_and_more.py +31 -31
- endoreg_db/migrations/0016_rawpdffile_state_report_processing_required.py +18 -18
- endoreg_db/migrations/0017_firstname_lastname_center_first_names_and_more.py +37 -37
- endoreg_db/migrations/0018_reportreaderflag_reportreaderconfig.py +37 -37
- endoreg_db/migrations/0019_pdftype_cut_off_above_lines_and_more.py +42 -42
- endoreg_db/migrations/0020_rename_endoscopy_info_line_pdftype_endoscope_info_line.py +18 -18
- endoreg_db/migrations/0021_alter_pdftype_endoscope_info_line.py +19 -19
- endoreg_db/migrations/0022_alter_pdftype_endoscope_info_line.py +19 -19
- endoreg_db/migrations/0023_ttoquestionnaire_alter_pdftype_endoscope_info_line.py +59 -59
- endoreg_db/migrations/0024_remove_ttoquestionnaire_infections_and_more.py +27 -27
- endoreg_db/migrations/0025_event_alter_rawpdffile_file_patientevent.py +42 -42
- endoreg_db/migrations/0026_disease_diseaseclassification_and_more.py +166 -166
- endoreg_db/migrations/0027_labvalue_abbreviation_labvalue_default_normal_range_and_more.py +38 -38
- endoreg_db/migrations/0028_alter_unit_abbreviation.py +18 -18
- endoreg_db/migrations/0029_medicationintaketime_and_more.py +75 -75
- endoreg_db/migrations/0030_medicationindicationtype_and_more.py +101 -101
- endoreg_db/migrations/0031_rename_adapt_to_liver_function_medication_adapt_to_age_and_more.py +38 -38
- endoreg_db/migrations/0032_alter_medicationschedule_therapy_duration_d.py +18 -18
- endoreg_db/migrations/0033_medicationindication_sources.py +18 -18
- endoreg_db/migrations/0034_alter_rawpdffile_file.py +20 -20
- endoreg_db/migrations/0035_alter_medicationindication_sources.py +18 -18
- endoreg_db/migrations/0036_alter_rawpdffile_file.py +20 -20
- endoreg_db/migrations/0037_alter_medicationindication_sources.py +18 -18
- endoreg_db/migrations/0038_emissionfactor_material_product_productgroup_and_more.py +164 -164
- endoreg_db/migrations/0039_referenceproduct_name.py +19 -19
- endoreg_db/migrations/0040_quizanswertype_quizquestiontype_quizquestion_and_more.py +50 -50
- endoreg_db/migrations/0041_gender_patientmedication_medication_indication_and_more.py +40 -40
- endoreg_db/migrations/0042_casetemplateruletype_casetemplaterulevalue_and_more.py +74 -74
- endoreg_db/migrations/0043_casetemplatetype_name_de_casetemplatetype_name_en.py +23 -23
- endoreg_db/migrations/0044_casetemplateruletype_name_de_and_more.py +23 -23
- endoreg_db/migrations/0045_casetemplaterulevalue_value_type.py +19 -19
- endoreg_db/migrations/0046_casetemplaterulevalue_target_field.py +18 -18
- endoreg_db/migrations/0047_casetemplaterule_target_model.py +18 -18
- endoreg_db/migrations/0048_remove_casetemplaterule_chained_rules_and_more.py +22 -22
- endoreg_db/migrations/0049_remove_casetemplaterule_rule_values.py +17 -17
- endoreg_db/migrations/0050_casetemplaterule_rule_values.py +18 -18
- endoreg_db/migrations/0051_remove_casetemplaterule_calling_rules_and_more.py +27 -27
- endoreg_db/migrations/0052_rename_case_template_type_casetemplate_template_type.py +18 -18
- endoreg_db/migrations/0053_patientlabsampletype_patientlabsample_and_more.py +38 -38
- endoreg_db/migrations/0054_multiplecategoricalvaluedistribution_and_more.py +69 -69
- endoreg_db/migrations/0055_remove_casetemplaterule_rule_values_and_more.py +59 -59
- endoreg_db/migrations/0056_datevaluedistribution_and_more.py +32 -32
- endoreg_db/migrations/0057_remove_datevaluedistribution_max_date_and_more.py +72 -72
- endoreg_db/migrations/0058_datevaluedistribution_description_and_more.py +28 -28
- endoreg_db/migrations/0059_casetemplaterule_rule_values.py +18 -18
- endoreg_db/migrations/0060_labvalue__default_date_value_distribution_and_more.py +44 -44
- endoreg_db/migrations/0061_remove_patientlabvalue_date_patientlabvalue_datetime.py +24 -24
- endoreg_db/migrations/0062_labvalue_numeric_precision.py +18 -18
- endoreg_db/migrations/0063_alter_labvalue_numeric_precision.py +18 -18
- endoreg_db/migrations/0064_casetemplaterule_extra_parameters_and_more.py +23 -23
- endoreg_db/migrations/0065_rename__date_value_distribution_casetemplaterule_date_value_distribution_and_more.py +58 -58
- endoreg_db/migrations/0066_alter_patientlabvalue_patient_and_more.py +29 -29
- endoreg_db/migrations/0067_alter_medicationindication_indication_type.py +19 -19
- endoreg_db/models/__init__.py +75 -74
- endoreg_db/models/ai_model/__init__.py +3 -3
- endoreg_db/models/ai_model/active_model.py +9 -9
- endoreg_db/models/ai_model/model_meta.py +24 -24
- endoreg_db/models/ai_model/model_type.py +25 -25
- endoreg_db/models/ai_model/utils.py +8 -8
- endoreg_db/models/annotation/__init__.py +1 -1
- endoreg_db/models/annotation/binary_classification_annotation_task.py +80 -80
- endoreg_db/models/annotation/image_classification.py +26 -26
- endoreg_db/models/case_template/__init__.py +5 -5
- endoreg_db/models/case_template/case_template.py +81 -81
- endoreg_db/models/case_template/case_template_rule.py +276 -276
- endoreg_db/models/case_template/case_template_rule_value.py +73 -73
- endoreg_db/models/case_template/case_template_type.py +27 -27
- endoreg_db/models/center/__init__.py +4 -4
- endoreg_db/models/center/center.py +24 -24
- endoreg_db/models/center/center_product.py +33 -33
- endoreg_db/models/center/center_resource.py +18 -18
- endoreg_db/models/center/center_waste.py +10 -10
- endoreg_db/models/data_file/__init__.py +5 -5
- endoreg_db/models/data_file/base_classes/__init__.py +2 -2
- endoreg_db/models/data_file/base_classes/abstract_frame.py +50 -50
- endoreg_db/models/data_file/base_classes/abstract_video.py +200 -200
- endoreg_db/models/data_file/frame.py +45 -45
- endoreg_db/models/data_file/import_classes/__init__.py +31 -31
- endoreg_db/models/data_file/import_classes/processing_functions/__init__.py +34 -34
- endoreg_db/models/data_file/import_classes/processing_functions/pdf.py +28 -28
- endoreg_db/models/data_file/import_classes/processing_functions/video.py +260 -260
- endoreg_db/models/data_file/import_classes/raw_pdf.py +188 -188
- endoreg_db/models/data_file/import_classes/raw_video.py +343 -343
- endoreg_db/models/data_file/metadata/__init__.py +3 -3
- endoreg_db/models/data_file/metadata/pdf_meta.py +70 -70
- endoreg_db/models/data_file/metadata/sensitive_meta.py +31 -31
- endoreg_db/models/data_file/metadata/video_meta.py +132 -132
- endoreg_db/models/data_file/report_file.py +89 -89
- endoreg_db/models/data_file/video/__init__.py +6 -6
- endoreg_db/models/data_file/video/import_meta.py +25 -25
- endoreg_db/models/data_file/video/video.py +25 -25
- endoreg_db/models/data_file/video_segment.py +107 -107
- endoreg_db/models/disease.py +55 -55
- endoreg_db/models/emission/emission_factor.py +19 -19
- endoreg_db/models/event.py +21 -21
- endoreg_db/models/examination/__init__.py +3 -3
- endoreg_db/models/examination/examination.py +26 -26
- endoreg_db/models/examination/examination_time.py +27 -27
- endoreg_db/models/examination/examination_time_type.py +24 -24
- endoreg_db/models/examination/examination_type.py +18 -18
- endoreg_db/models/hardware/__init__.py +1 -1
- endoreg_db/models/hardware/endoscope.py +44 -44
- endoreg_db/models/hardware/endoscopy_processor.py +143 -143
- endoreg_db/models/information_source.py +29 -29
- endoreg_db/models/label/label.py +84 -84
- endoreg_db/models/laboratory/lab_value.py +102 -102
- endoreg_db/models/legacy_data/__init__.py +3 -3
- endoreg_db/models/legacy_data/image.py +34 -34
- endoreg_db/models/medication/medication.py +148 -148
- endoreg_db/models/network/__init__.py +2 -0
- endoreg_db/models/network/network_device.py +27 -0
- endoreg_db/models/network/network_device_type.py +23 -0
- endoreg_db/models/other/__init__.py +4 -4
- endoreg_db/models/other/distribution.py +215 -215
- endoreg_db/models/other/material.py +16 -16
- endoreg_db/models/other/resource.py +17 -17
- endoreg_db/models/other/transport_route.py +20 -20
- endoreg_db/models/other/waste.py +20 -20
- endoreg_db/models/patient_examination/__init__.py +35 -35
- endoreg_db/models/permissions/__init__.py +44 -44
- endoreg_db/models/persons/__init__.py +6 -6
- endoreg_db/models/persons/examiner/__init__.py +1 -1
- endoreg_db/models/persons/examiner/examiner.py +15 -15
- endoreg_db/models/persons/examiner/examiner_type.py +1 -1
- endoreg_db/models/persons/first_name.py +17 -17
- endoreg_db/models/persons/gender.py +22 -22
- endoreg_db/models/persons/last_name.py +19 -19
- endoreg_db/models/persons/patient/__init__.py +7 -7
- endoreg_db/models/persons/patient/case/case.py +30 -30
- endoreg_db/models/persons/patient/patient.py +216 -216
- endoreg_db/models/persons/patient/patient_disease.py +16 -16
- endoreg_db/models/persons/patient/patient_event.py +22 -22
- endoreg_db/models/persons/patient/patient_lab_sample.py +106 -106
- endoreg_db/models/persons/patient/patient_lab_value.py +176 -176
- endoreg_db/models/persons/patient/patient_medication.py +43 -43
- endoreg_db/models/persons/patient/patient_medication_schedule.py +27 -27
- endoreg_db/models/persons/person.py +31 -31
- endoreg_db/models/persons/portal_user_information.py +27 -27
- endoreg_db/models/prediction/__init__.py +1 -1
- endoreg_db/models/prediction/image_classification.py +37 -37
- endoreg_db/models/prediction/video_prediction_meta.py +244 -244
- endoreg_db/models/product/__init__.py +4 -4
- endoreg_db/models/product/product.py +97 -97
- endoreg_db/models/product/product_group.py +19 -19
- endoreg_db/models/product/product_material.py +24 -24
- endoreg_db/models/product/product_weight.py +26 -26
- endoreg_db/models/product/reference_product.py +99 -99
- endoreg_db/models/questionnaires/__init__.py +114 -114
- endoreg_db/models/quiz/__init__.py +1 -1
- endoreg_db/models/quiz/quiz_answer.py +41 -41
- endoreg_db/models/quiz/quiz_question.py +54 -54
- endoreg_db/models/report_reader/__init__.py +1 -1
- endoreg_db/models/report_reader/report_reader_config.py +53 -53
- endoreg_db/models/report_reader/report_reader_flag.py +19 -19
- endoreg_db/models/rules/__init__.py +4 -4
- endoreg_db/models/rules/rule.py +23 -23
- endoreg_db/models/rules/rule_applicator.py +224 -224
- endoreg_db/models/rules/rule_attribute_dtype.py +18 -18
- endoreg_db/models/rules/rule_type.py +21 -21
- endoreg_db/models/rules/ruleset.py +19 -19
- endoreg_db/models/unit.py +21 -21
- endoreg_db/queries/__init__.py +4 -4
- endoreg_db/queries/annotations/__init__.py +2 -2
- endoreg_db/queries/annotations/legacy.py +159 -159
- endoreg_db/queries/get/__init__.py +5 -5
- endoreg_db/queries/get/center.py +42 -42
- endoreg_db/queries/get/model.py +13 -13
- endoreg_db/queries/get/patient.py +14 -14
- endoreg_db/queries/get/patient_examination.py +20 -20
- endoreg_db/queries/get/report_file.py +33 -33
- endoreg_db/queries/get/video.py +31 -31
- endoreg_db/serializers/__init__.py +9 -9
- endoreg_db/serializers/ai_model.py +18 -18
- endoreg_db/serializers/annotation.py +17 -17
- endoreg_db/serializers/center.py +11 -11
- endoreg_db/serializers/examination.py +32 -32
- endoreg_db/serializers/frame.py +13 -13
- endoreg_db/serializers/hardware.py +20 -20
- endoreg_db/serializers/label.py +22 -22
- endoreg_db/serializers/patient.py +10 -10
- endoreg_db/serializers/prediction.py +15 -15
- endoreg_db/serializers/report_file.py +7 -7
- endoreg_db/serializers/video.py +27 -27
- endoreg_db/tests.py +3 -3
- endoreg_db/utils/cropping.py +28 -28
- endoreg_db/utils/dataloader.py +92 -92
- endoreg_db/utils/file_operations.py +30 -30
- endoreg_db/utils/hashs.py +33 -33
- endoreg_db/utils/legacy_ocr.py +201 -201
- endoreg_db/utils/ocr.py +197 -197
- endoreg_db/utils/uuid.py +4 -4
- endoreg_db/utils/video_metadata.py +87 -87
- endoreg_db/views.py +3 -3
- {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.7.dist-info}/LICENSE +674 -674
- {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.7.dist-info}/METADATA +2 -2
- endoreg_db-0.3.7.dist-info/RECORD +363 -0
- {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.7.dist-info}/WHEEL +1 -1
- endoreg_db-0.3.6.dist-info/RECORD +0 -357
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@@ -1,28 +1,28 @@
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from django.db import models
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class PatientMedicationSchedule(models.Model):
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patient = models.ForeignKey("Patient", on_delete= models.CASCADE)
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medication = models.ManyToManyField(
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'PatientMedication', related_name='patient_medication_schedules'
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)
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created_at = models.DateTimeField(auto_now_add=True)
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updated_at = models.DateTimeField(auto_now=True)
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def __str__(self):
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return f'{self.patient} - {self.medication.all()}'
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@classmethod
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def create_by_patient_and_indication_type(cls, patient, indication_type):
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from endoreg_db.models import MedicationIndicationType, PatientMedication
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medication_indication = MedicationIndicationType.get_random_indication_by_type(name=indication_type)
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patient_medication_schedule = cls.objects.create(patient=patient)
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patient_medication_schedule.save()
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patient_medication = PatientMedication.create_by_patient_and_indication(patient, medication_indication)
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patient_medication_schedule.medication.add(patient_medication)
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patient_medication_schedule.save()
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from django.db import models
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class PatientMedicationSchedule(models.Model):
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patient = models.ForeignKey("Patient", on_delete= models.CASCADE)
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medication = models.ManyToManyField(
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'PatientMedication', related_name='patient_medication_schedules'
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)
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created_at = models.DateTimeField(auto_now_add=True)
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updated_at = models.DateTimeField(auto_now=True)
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def __str__(self):
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return f'{self.patient} - {self.medication.all()}'
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@classmethod
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def create_by_patient_and_indication_type(cls, patient, indication_type):
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from endoreg_db.models import MedicationIndicationType, PatientMedication
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medication_indication = MedicationIndicationType.get_random_indication_by_type(name=indication_type)
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patient_medication_schedule = cls.objects.create(patient=patient)
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patient_medication_schedule.save()
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patient_medication = PatientMedication.create_by_patient_and_indication(patient, medication_indication)
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patient_medication_schedule.medication.add(patient_medication)
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patient_medication_schedule.save()
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return patient_medication_schedule
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from abc import abstractmethod
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class Person(models.Model):
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"""
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Abstract base class for a person.
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Attributes:
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first_name (str): The first name of the person.
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last_name (str): The last name of the person.
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dob (date): The date of birth of the person.
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gender (str): The gender of the person.
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email (str): The email address of the person.
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phone (str): The phone number of the person.
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"""
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last_name = models.CharField(max_length=255)
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dob = models.DateField("Date of Birth", blank=True, null=True)
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gender = models.ForeignKey("Gender", on_delete=models.SET_NULL, null=True)
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email = models.EmailField(max_length=255, blank=True, null=True)
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phone = models.CharField(max_length=255, blank=True, null=True)
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is_real_person = models.BooleanField(default=True)
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@abstractmethod
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pass
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class Meta:
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abstract = True
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from abc import abstractmethod
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class Person(models.Model):
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"""
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Abstract base class for a person.
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Attributes:
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first_name (str): The first name of the person.
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last_name (str): The last name of the person.
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dob (date): The date of birth of the person.
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gender (str): The gender of the person.
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email (str): The email address of the person.
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phone (str): The phone number of the person.
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"""
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first_name = models.CharField(max_length=255)
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last_name = models.CharField(max_length=255)
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dob = models.DateField("Date of Birth", blank=True, null=True)
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gender = models.ForeignKey("Gender", on_delete=models.SET_NULL, null=True)
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email = models.EmailField(max_length=255, blank=True, null=True)
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phone = models.CharField(max_length=255, blank=True, null=True)
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is_real_person = models.BooleanField(default=True)
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@abstractmethod
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def __str__(self):
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pass
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class Meta:
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abstract = True
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from django.db import models
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# models.py in your main app
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from django.contrib.auth.models import User
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class ProfessionManager(models.Manager):
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def get_by_natural_key(self, name):
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return self.get(name=name)
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class Profession(models.Model):
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objects = ProfessionManager()
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name = models.CharField(max_length=100)
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name_de = models.CharField(max_length=100, blank=True, null=True)
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name_en = models.CharField(max_length=100, blank=True, null=True)
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description = models.TextField(blank=True, null=True)
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def __str__(self):
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return self.name_de
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class PortalUserInfo(models.Model):
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user = models.OneToOneField(User, on_delete=models.CASCADE)
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profession = models.ForeignKey('Profession', on_delete=models.CASCADE, blank=True, null=True)
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works_in_endoscopy = models.BooleanField(blank=True, null=True)
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# Add other fields as needed
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def __str__(self):
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return self.user.username
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from django.db import models
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# models.py in your main app
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from django.contrib.auth.models import User
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class ProfessionManager(models.Manager):
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def get_by_natural_key(self, name):
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return self.get(name=name)
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class Profession(models.Model):
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objects = ProfessionManager()
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name = models.CharField(max_length=100)
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name_de = models.CharField(max_length=100, blank=True, null=True)
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name_en = models.CharField(max_length=100, blank=True, null=True)
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description = models.TextField(blank=True, null=True)
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def __str__(self):
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return self.name_de
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class PortalUserInfo(models.Model):
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user = models.OneToOneField(User, on_delete=models.CASCADE)
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profession = models.ForeignKey('Profession', on_delete=models.CASCADE, blank=True, null=True)
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works_in_endoscopy = models.BooleanField(blank=True, null=True)
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# Add other fields as needed
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def __str__(self):
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return self.user.username
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@@ -1,2 +1,2 @@
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from .image_classification import ImageClassificationPrediction
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from .image_classification import ImageClassificationPrediction
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2
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from .video_prediction_meta import LegacyVideoPredictionMeta, VideoPredictionMeta
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from django.db import models
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class ImageClassificationPrediction(models.Model):
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"""
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A class representing an image classification prediction.
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Attributes:
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label (Label): The label of the prediction.
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frame (Frame): The frame of the prediction.
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confidence (float): The confidence of the prediction.
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date_created (datetime): The date the prediction was created.
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"""
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label = models.ForeignKey("Label", on_delete=models.CASCADE, related_name="image_classification_predictions")
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frame = models.ForeignKey("Frame", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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legacy_frame = models.ForeignKey("LegacyFrame", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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legacy_image = models.ForeignKey("LegacyImage", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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value = models.BooleanField()
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confidence = models.FloatField()
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model_meta = models.ForeignKey("ModelMeta", on_delete=models.CASCADE, related_name="image_classification_predictions")
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date_created = models.DateTimeField(auto_now_add=True)
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class Meta:
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unique_together = ('label', 'frame', 'model_meta')
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def get_image_object(self):
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"""
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Get the image of the prediction.
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"""
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if self.frame:
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return self.frame
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elif self.legacy_frame:
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return self.legacy_frame
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elif self.legacy_image:
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return self.legacy_image
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else:
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return None
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from django.db import models
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2
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3
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class ImageClassificationPrediction(models.Model):
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"""
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5
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A class representing an image classification prediction.
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6
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7
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Attributes:
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8
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label (Label): The label of the prediction.
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9
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frame (Frame): The frame of the prediction.
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10
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confidence (float): The confidence of the prediction.
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date_created (datetime): The date the prediction was created.
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12
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+
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13
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"""
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14
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label = models.ForeignKey("Label", on_delete=models.CASCADE, related_name="image_classification_predictions")
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15
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frame = models.ForeignKey("Frame", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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16
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legacy_frame = models.ForeignKey("LegacyFrame", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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legacy_image = models.ForeignKey("LegacyImage", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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18
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value = models.BooleanField()
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confidence = models.FloatField()
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20
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model_meta = models.ForeignKey("ModelMeta", on_delete=models.CASCADE, related_name="image_classification_predictions")
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21
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date_created = models.DateTimeField(auto_now_add=True)
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22
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+
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23
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class Meta:
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24
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unique_together = ('label', 'frame', 'model_meta')
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25
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+
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26
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def get_image_object(self):
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"""
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Get the image of the prediction.
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29
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"""
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if self.frame:
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31
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return self.frame
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32
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elif self.legacy_frame:
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33
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return self.legacy_frame
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34
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elif self.legacy_image:
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35
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return self.legacy_image
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36
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else:
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37
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return None
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