endoreg-db 0.3.6__py3-none-any.whl → 0.3.7__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (347) hide show
  1. endoreg_db/admin.py +3 -3
  2. endoreg_db/apps.py +6 -6
  3. endoreg_db/data/__init__.py +67 -64
  4. endoreg_db/data/active_model/data.yaml +2 -2
  5. endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +167 -167
  6. endoreg_db/data/case_template/rule/01_patient-set-age.yaml +7 -7
  7. endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +8 -8
  8. endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +22 -22
  9. endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +18 -18
  10. endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +18 -18
  11. endoreg_db/data/case_template/rule/19_create_patient.yaml +16 -16
  12. endoreg_db/data/case_template/rule_type/base_types.yaml +35 -35
  13. endoreg_db/data/case_template/rule_value_type/base_types.yaml +58 -58
  14. endoreg_db/data/case_template/template/base.yaml +7 -7
  15. endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +2 -2
  16. endoreg_db/data/case_template/tmp/_rule_value +13 -13
  17. endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +21 -21
  18. endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +9 -9
  19. endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +6 -6
  20. endoreg_db/data/center/data.yaml +59 -59
  21. endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +144 -144
  22. endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +48 -48
  23. endoreg_db/data/disease/cardiovascular.yaml +37 -37
  24. endoreg_db/data/disease/hepatology.yaml +4 -4
  25. endoreg_db/data/disease/misc.yaml +5 -5
  26. endoreg_db/data/disease/renal.yaml +4 -4
  27. endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +5 -5
  28. endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +5 -5
  29. endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +40 -40
  30. endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +19 -19
  31. endoreg_db/data/distribution/date/patient.yaml +6 -6
  32. endoreg_db/data/distribution/single_categorical/patient.yaml +6 -6
  33. endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +132 -132
  34. endoreg_db/data/endoscope_type/data.yaml +10 -10
  35. endoreg_db/data/endoscopy_processor/data.yaml +45 -45
  36. endoreg_db/data/event/cardiology.yaml +27 -27
  37. endoreg_db/data/event/neurology.yaml +13 -13
  38. endoreg_db/data/event/surgery.yaml +12 -12
  39. endoreg_db/data/event/thrombembolism.yaml +19 -19
  40. endoreg_db/data/examination/examinations/data.yaml +65 -65
  41. endoreg_db/data/examination/time/data.yaml +47 -47
  42. endoreg_db/data/examination/time-type/data.yaml +7 -7
  43. endoreg_db/data/examination/type/data.yaml +5 -5
  44. endoreg_db/data/gender/data.yaml +18 -18
  45. endoreg_db/data/information_source/data.yaml +30 -30
  46. endoreg_db/data/information_source/medication.yaml +5 -5
  47. endoreg_db/data/lab_value/cardiac_enzymes.yaml +30 -30
  48. endoreg_db/data/lab_value/coagulation.yaml +48 -48
  49. endoreg_db/data/lab_value/electrolytes.yaml +189 -189
  50. endoreg_db/data/lab_value/gastrointestinal_function.yaml +121 -121
  51. endoreg_db/data/lab_value/hematology.yaml +169 -169
  52. endoreg_db/data/lab_value/hormones.yaml +53 -53
  53. endoreg_db/data/lab_value/lipids.yaml +44 -44
  54. endoreg_db/data/lab_value/misc.yaml +30 -30
  55. endoreg_db/data/lab_value/renal_function.yaml +10 -10
  56. endoreg_db/data/label/label/data.yaml +62 -62
  57. endoreg_db/data/label/label-set/data.yaml +17 -17
  58. endoreg_db/data/label/label-type/data.yaml +6 -6
  59. endoreg_db/data/medication/anticoagulation.yaml +64 -64
  60. endoreg_db/data/medication/tah.yaml +69 -69
  61. endoreg_db/data/medication_indication/anticoagulation.yaml +120 -120
  62. endoreg_db/data/medication_indication_type/data.yaml +10 -10
  63. endoreg_db/data/medication_indication_type/thrombembolism.yaml +40 -40
  64. endoreg_db/data/medication_intake_time/base.yaml +30 -30
  65. endoreg_db/data/medication_schedule/apixaban.yaml +94 -94
  66. endoreg_db/data/medication_schedule/ass.yaml +12 -12
  67. endoreg_db/data/medication_schedule/enoxaparin.yaml +26 -26
  68. endoreg_db/data/model_type/data.yaml +6 -6
  69. endoreg_db/data/network_device/data.yaml +17 -0
  70. endoreg_db/data/network_device_type/data.yaml +8 -0
  71. endoreg_db/data/patient_lab_sample_type/generic.yaml +5 -5
  72. endoreg_db/data/pdf_type/data.yaml +28 -28
  73. endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +66 -66
  74. endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +33 -33
  75. endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +308 -308
  76. endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +88 -88
  77. endoreg_db/data/profession/data.yaml +70 -70
  78. endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +55 -55
  79. endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +26 -26
  80. endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +19 -19
  81. endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +15 -15
  82. endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +12 -12
  83. endoreg_db/data/unit/concentration.yaml +92 -92
  84. endoreg_db/data/unit/data.yaml +17 -17
  85. endoreg_db/data/unit/length.yaml +30 -30
  86. endoreg_db/data/unit/misc.yaml +19 -19
  87. endoreg_db/data/unit/rate.yaml +5 -5
  88. endoreg_db/data/unit/time.yaml +12 -12
  89. endoreg_db/data/unit/volume.yaml +35 -35
  90. endoreg_db/data/unit/weight.yaml +37 -37
  91. endoreg_db/data/waste/data.yaml +11 -11
  92. endoreg_db/forms/__init__.py +2 -2
  93. endoreg_db/forms/questionnaires/tto_questionnaire.py +23 -23
  94. endoreg_db/forms/settings/__init__.py +8 -8
  95. endoreg_db/forms/unit.py +5 -5
  96. endoreg_db/management/commands/_load_model_template.py +40 -40
  97. endoreg_db/management/commands/delete_all.py +18 -18
  98. endoreg_db/management/commands/delete_legacy_images.py +19 -19
  99. endoreg_db/management/commands/delete_legacy_videos.py +16 -16
  100. endoreg_db/management/commands/extract_legacy_video_frames.py +18 -18
  101. endoreg_db/management/commands/fetch_legacy_image_dataset.py +32 -32
  102. endoreg_db/management/commands/fix_auth_permission.py +20 -20
  103. endoreg_db/management/commands/import_legacy_images.py +94 -94
  104. endoreg_db/management/commands/import_legacy_videos.py +76 -76
  105. endoreg_db/management/commands/load_active_model_data.py +44 -44
  106. endoreg_db/management/commands/load_ai_model_data.py +44 -44
  107. endoreg_db/management/commands/load_base_db_data.py +132 -128
  108. endoreg_db/management/commands/load_center_data.py +42 -42
  109. endoreg_db/management/commands/load_disease_classification_choices_data.py +40 -40
  110. endoreg_db/management/commands/load_disease_classification_data.py +40 -40
  111. endoreg_db/management/commands/load_disease_data.py +39 -39
  112. endoreg_db/management/commands/load_distribution_data.py +65 -65
  113. endoreg_db/management/commands/load_endoscope_type_data.py +44 -44
  114. endoreg_db/management/commands/load_endoscopy_processor_data.py +44 -44
  115. endoreg_db/management/commands/load_event_data.py +40 -40
  116. endoreg_db/management/commands/load_examination_data.py +74 -74
  117. endoreg_db/management/commands/load_g_play_data.py +112 -112
  118. endoreg_db/management/commands/load_gender_data.py +43 -43
  119. endoreg_db/management/commands/load_green_endoscopy_wuerzburg_data.py +132 -132
  120. endoreg_db/management/commands/load_information_source.py +44 -44
  121. endoreg_db/management/commands/load_lab_value_data.py +49 -49
  122. endoreg_db/management/commands/load_label_data.py +66 -66
  123. endoreg_db/management/commands/load_medication_data.py +40 -40
  124. endoreg_db/management/commands/load_medication_indication_data.py +62 -62
  125. endoreg_db/management/commands/load_medication_indication_type_data.py +40 -40
  126. endoreg_db/management/commands/load_medication_intake_time_data.py +40 -40
  127. endoreg_db/management/commands/load_medication_schedule_data.py +54 -54
  128. endoreg_db/management/commands/load_network_data.py +49 -0
  129. endoreg_db/management/commands/load_pdf_type_data.py +60 -60
  130. endoreg_db/management/commands/load_profession_data.py +43 -43
  131. endoreg_db/management/commands/load_report_reader_flag.py +45 -45
  132. endoreg_db/management/commands/load_unit_data.py +45 -45
  133. endoreg_db/management/commands/load_user_groups.py +28 -28
  134. endoreg_db/management/commands/register_ai_model.py +65 -65
  135. endoreg_db/management/commands/reset_celery_schedule.py +9 -9
  136. endoreg_db/migrations/0001_initial.py +582 -582
  137. endoreg_db/migrations/0002_rawvideofile.py +26 -26
  138. endoreg_db/migrations/0003_rawvideofile_frames_required.py +18 -18
  139. endoreg_db/migrations/0004_rename_hash_rawvideofile_video_hash.py +18 -18
  140. endoreg_db/migrations/0005_ffmpegmeta_remove_videoimportmeta_center_and_more.py +56 -56
  141. endoreg_db/migrations/0006_rawvideofile_center_alter_videometa_processor.py +25 -25
  142. endoreg_db/migrations/0007_rawvideofile_processor.py +19 -19
  143. endoreg_db/migrations/0008_rename_frames_required_rawvideofile_state_frames_required.py +18 -18
  144. endoreg_db/migrations/0009_sensitivemeta_rawvideofile_sensitive_meta.py +31 -31
  145. endoreg_db/migrations/0010_rename_endoscope_serial_number_sensitivemeta_endoscope_sn.py +18 -18
  146. endoreg_db/migrations/0011_rawvideofile_state_sensitive_data_retrieved.py +18 -18
  147. endoreg_db/migrations/0012_rawvideofile_prediction_dir_and_more.py +109 -109
  148. endoreg_db/migrations/0013_rawpdffile.py +31 -31
  149. endoreg_db/migrations/0014_pdftype_alter_rawpdffile_file_pdfmeta.py +38 -38
  150. endoreg_db/migrations/0015_rename_report_processed_rawpdffile_state_report_processed_and_more.py +31 -31
  151. endoreg_db/migrations/0016_rawpdffile_state_report_processing_required.py +18 -18
  152. endoreg_db/migrations/0017_firstname_lastname_center_first_names_and_more.py +37 -37
  153. endoreg_db/migrations/0018_reportreaderflag_reportreaderconfig.py +37 -37
  154. endoreg_db/migrations/0019_pdftype_cut_off_above_lines_and_more.py +42 -42
  155. endoreg_db/migrations/0020_rename_endoscopy_info_line_pdftype_endoscope_info_line.py +18 -18
  156. endoreg_db/migrations/0021_alter_pdftype_endoscope_info_line.py +19 -19
  157. endoreg_db/migrations/0022_alter_pdftype_endoscope_info_line.py +19 -19
  158. endoreg_db/migrations/0023_ttoquestionnaire_alter_pdftype_endoscope_info_line.py +59 -59
  159. endoreg_db/migrations/0024_remove_ttoquestionnaire_infections_and_more.py +27 -27
  160. endoreg_db/migrations/0025_event_alter_rawpdffile_file_patientevent.py +42 -42
  161. endoreg_db/migrations/0026_disease_diseaseclassification_and_more.py +166 -166
  162. endoreg_db/migrations/0027_labvalue_abbreviation_labvalue_default_normal_range_and_more.py +38 -38
  163. endoreg_db/migrations/0028_alter_unit_abbreviation.py +18 -18
  164. endoreg_db/migrations/0029_medicationintaketime_and_more.py +75 -75
  165. endoreg_db/migrations/0030_medicationindicationtype_and_more.py +101 -101
  166. endoreg_db/migrations/0031_rename_adapt_to_liver_function_medication_adapt_to_age_and_more.py +38 -38
  167. endoreg_db/migrations/0032_alter_medicationschedule_therapy_duration_d.py +18 -18
  168. endoreg_db/migrations/0033_medicationindication_sources.py +18 -18
  169. endoreg_db/migrations/0034_alter_rawpdffile_file.py +20 -20
  170. endoreg_db/migrations/0035_alter_medicationindication_sources.py +18 -18
  171. endoreg_db/migrations/0036_alter_rawpdffile_file.py +20 -20
  172. endoreg_db/migrations/0037_alter_medicationindication_sources.py +18 -18
  173. endoreg_db/migrations/0038_emissionfactor_material_product_productgroup_and_more.py +164 -164
  174. endoreg_db/migrations/0039_referenceproduct_name.py +19 -19
  175. endoreg_db/migrations/0040_quizanswertype_quizquestiontype_quizquestion_and_more.py +50 -50
  176. endoreg_db/migrations/0041_gender_patientmedication_medication_indication_and_more.py +40 -40
  177. endoreg_db/migrations/0042_casetemplateruletype_casetemplaterulevalue_and_more.py +74 -74
  178. endoreg_db/migrations/0043_casetemplatetype_name_de_casetemplatetype_name_en.py +23 -23
  179. endoreg_db/migrations/0044_casetemplateruletype_name_de_and_more.py +23 -23
  180. endoreg_db/migrations/0045_casetemplaterulevalue_value_type.py +19 -19
  181. endoreg_db/migrations/0046_casetemplaterulevalue_target_field.py +18 -18
  182. endoreg_db/migrations/0047_casetemplaterule_target_model.py +18 -18
  183. endoreg_db/migrations/0048_remove_casetemplaterule_chained_rules_and_more.py +22 -22
  184. endoreg_db/migrations/0049_remove_casetemplaterule_rule_values.py +17 -17
  185. endoreg_db/migrations/0050_casetemplaterule_rule_values.py +18 -18
  186. endoreg_db/migrations/0051_remove_casetemplaterule_calling_rules_and_more.py +27 -27
  187. endoreg_db/migrations/0052_rename_case_template_type_casetemplate_template_type.py +18 -18
  188. endoreg_db/migrations/0053_patientlabsampletype_patientlabsample_and_more.py +38 -38
  189. endoreg_db/migrations/0054_multiplecategoricalvaluedistribution_and_more.py +69 -69
  190. endoreg_db/migrations/0055_remove_casetemplaterule_rule_values_and_more.py +59 -59
  191. endoreg_db/migrations/0056_datevaluedistribution_and_more.py +32 -32
  192. endoreg_db/migrations/0057_remove_datevaluedistribution_max_date_and_more.py +72 -72
  193. endoreg_db/migrations/0058_datevaluedistribution_description_and_more.py +28 -28
  194. endoreg_db/migrations/0059_casetemplaterule_rule_values.py +18 -18
  195. endoreg_db/migrations/0060_labvalue__default_date_value_distribution_and_more.py +44 -44
  196. endoreg_db/migrations/0061_remove_patientlabvalue_date_patientlabvalue_datetime.py +24 -24
  197. endoreg_db/migrations/0062_labvalue_numeric_precision.py +18 -18
  198. endoreg_db/migrations/0063_alter_labvalue_numeric_precision.py +18 -18
  199. endoreg_db/migrations/0064_casetemplaterule_extra_parameters_and_more.py +23 -23
  200. endoreg_db/migrations/0065_rename__date_value_distribution_casetemplaterule_date_value_distribution_and_more.py +58 -58
  201. endoreg_db/migrations/0066_alter_patientlabvalue_patient_and_more.py +29 -29
  202. endoreg_db/migrations/0067_alter_medicationindication_indication_type.py +19 -19
  203. endoreg_db/models/__init__.py +75 -74
  204. endoreg_db/models/ai_model/__init__.py +3 -3
  205. endoreg_db/models/ai_model/active_model.py +9 -9
  206. endoreg_db/models/ai_model/model_meta.py +24 -24
  207. endoreg_db/models/ai_model/model_type.py +25 -25
  208. endoreg_db/models/ai_model/utils.py +8 -8
  209. endoreg_db/models/annotation/__init__.py +1 -1
  210. endoreg_db/models/annotation/binary_classification_annotation_task.py +80 -80
  211. endoreg_db/models/annotation/image_classification.py +26 -26
  212. endoreg_db/models/case_template/__init__.py +5 -5
  213. endoreg_db/models/case_template/case_template.py +81 -81
  214. endoreg_db/models/case_template/case_template_rule.py +276 -276
  215. endoreg_db/models/case_template/case_template_rule_value.py +73 -73
  216. endoreg_db/models/case_template/case_template_type.py +27 -27
  217. endoreg_db/models/center/__init__.py +4 -4
  218. endoreg_db/models/center/center.py +24 -24
  219. endoreg_db/models/center/center_product.py +33 -33
  220. endoreg_db/models/center/center_resource.py +18 -18
  221. endoreg_db/models/center/center_waste.py +10 -10
  222. endoreg_db/models/data_file/__init__.py +5 -5
  223. endoreg_db/models/data_file/base_classes/__init__.py +2 -2
  224. endoreg_db/models/data_file/base_classes/abstract_frame.py +50 -50
  225. endoreg_db/models/data_file/base_classes/abstract_video.py +200 -200
  226. endoreg_db/models/data_file/frame.py +45 -45
  227. endoreg_db/models/data_file/import_classes/__init__.py +31 -31
  228. endoreg_db/models/data_file/import_classes/processing_functions/__init__.py +34 -34
  229. endoreg_db/models/data_file/import_classes/processing_functions/pdf.py +28 -28
  230. endoreg_db/models/data_file/import_classes/processing_functions/video.py +260 -260
  231. endoreg_db/models/data_file/import_classes/raw_pdf.py +188 -188
  232. endoreg_db/models/data_file/import_classes/raw_video.py +343 -343
  233. endoreg_db/models/data_file/metadata/__init__.py +3 -3
  234. endoreg_db/models/data_file/metadata/pdf_meta.py +70 -70
  235. endoreg_db/models/data_file/metadata/sensitive_meta.py +31 -31
  236. endoreg_db/models/data_file/metadata/video_meta.py +132 -132
  237. endoreg_db/models/data_file/report_file.py +89 -89
  238. endoreg_db/models/data_file/video/__init__.py +6 -6
  239. endoreg_db/models/data_file/video/import_meta.py +25 -25
  240. endoreg_db/models/data_file/video/video.py +25 -25
  241. endoreg_db/models/data_file/video_segment.py +107 -107
  242. endoreg_db/models/disease.py +55 -55
  243. endoreg_db/models/emission/emission_factor.py +19 -19
  244. endoreg_db/models/event.py +21 -21
  245. endoreg_db/models/examination/__init__.py +3 -3
  246. endoreg_db/models/examination/examination.py +26 -26
  247. endoreg_db/models/examination/examination_time.py +27 -27
  248. endoreg_db/models/examination/examination_time_type.py +24 -24
  249. endoreg_db/models/examination/examination_type.py +18 -18
  250. endoreg_db/models/hardware/__init__.py +1 -1
  251. endoreg_db/models/hardware/endoscope.py +44 -44
  252. endoreg_db/models/hardware/endoscopy_processor.py +143 -143
  253. endoreg_db/models/information_source.py +29 -29
  254. endoreg_db/models/label/label.py +84 -84
  255. endoreg_db/models/laboratory/lab_value.py +102 -102
  256. endoreg_db/models/legacy_data/__init__.py +3 -3
  257. endoreg_db/models/legacy_data/image.py +34 -34
  258. endoreg_db/models/medication/medication.py +148 -148
  259. endoreg_db/models/network/__init__.py +2 -0
  260. endoreg_db/models/network/network_device.py +27 -0
  261. endoreg_db/models/network/network_device_type.py +23 -0
  262. endoreg_db/models/other/__init__.py +4 -4
  263. endoreg_db/models/other/distribution.py +215 -215
  264. endoreg_db/models/other/material.py +16 -16
  265. endoreg_db/models/other/resource.py +17 -17
  266. endoreg_db/models/other/transport_route.py +20 -20
  267. endoreg_db/models/other/waste.py +20 -20
  268. endoreg_db/models/patient_examination/__init__.py +35 -35
  269. endoreg_db/models/permissions/__init__.py +44 -44
  270. endoreg_db/models/persons/__init__.py +6 -6
  271. endoreg_db/models/persons/examiner/__init__.py +1 -1
  272. endoreg_db/models/persons/examiner/examiner.py +15 -15
  273. endoreg_db/models/persons/examiner/examiner_type.py +1 -1
  274. endoreg_db/models/persons/first_name.py +17 -17
  275. endoreg_db/models/persons/gender.py +22 -22
  276. endoreg_db/models/persons/last_name.py +19 -19
  277. endoreg_db/models/persons/patient/__init__.py +7 -7
  278. endoreg_db/models/persons/patient/case/case.py +30 -30
  279. endoreg_db/models/persons/patient/patient.py +216 -216
  280. endoreg_db/models/persons/patient/patient_disease.py +16 -16
  281. endoreg_db/models/persons/patient/patient_event.py +22 -22
  282. endoreg_db/models/persons/patient/patient_lab_sample.py +106 -106
  283. endoreg_db/models/persons/patient/patient_lab_value.py +176 -176
  284. endoreg_db/models/persons/patient/patient_medication.py +43 -43
  285. endoreg_db/models/persons/patient/patient_medication_schedule.py +27 -27
  286. endoreg_db/models/persons/person.py +31 -31
  287. endoreg_db/models/persons/portal_user_information.py +27 -27
  288. endoreg_db/models/prediction/__init__.py +1 -1
  289. endoreg_db/models/prediction/image_classification.py +37 -37
  290. endoreg_db/models/prediction/video_prediction_meta.py +244 -244
  291. endoreg_db/models/product/__init__.py +4 -4
  292. endoreg_db/models/product/product.py +97 -97
  293. endoreg_db/models/product/product_group.py +19 -19
  294. endoreg_db/models/product/product_material.py +24 -24
  295. endoreg_db/models/product/product_weight.py +26 -26
  296. endoreg_db/models/product/reference_product.py +99 -99
  297. endoreg_db/models/questionnaires/__init__.py +114 -114
  298. endoreg_db/models/quiz/__init__.py +1 -1
  299. endoreg_db/models/quiz/quiz_answer.py +41 -41
  300. endoreg_db/models/quiz/quiz_question.py +54 -54
  301. endoreg_db/models/report_reader/__init__.py +1 -1
  302. endoreg_db/models/report_reader/report_reader_config.py +53 -53
  303. endoreg_db/models/report_reader/report_reader_flag.py +19 -19
  304. endoreg_db/models/rules/__init__.py +4 -4
  305. endoreg_db/models/rules/rule.py +23 -23
  306. endoreg_db/models/rules/rule_applicator.py +224 -224
  307. endoreg_db/models/rules/rule_attribute_dtype.py +18 -18
  308. endoreg_db/models/rules/rule_type.py +21 -21
  309. endoreg_db/models/rules/ruleset.py +19 -19
  310. endoreg_db/models/unit.py +21 -21
  311. endoreg_db/queries/__init__.py +4 -4
  312. endoreg_db/queries/annotations/__init__.py +2 -2
  313. endoreg_db/queries/annotations/legacy.py +159 -159
  314. endoreg_db/queries/get/__init__.py +5 -5
  315. endoreg_db/queries/get/center.py +42 -42
  316. endoreg_db/queries/get/model.py +13 -13
  317. endoreg_db/queries/get/patient.py +14 -14
  318. endoreg_db/queries/get/patient_examination.py +20 -20
  319. endoreg_db/queries/get/report_file.py +33 -33
  320. endoreg_db/queries/get/video.py +31 -31
  321. endoreg_db/serializers/__init__.py +9 -9
  322. endoreg_db/serializers/ai_model.py +18 -18
  323. endoreg_db/serializers/annotation.py +17 -17
  324. endoreg_db/serializers/center.py +11 -11
  325. endoreg_db/serializers/examination.py +32 -32
  326. endoreg_db/serializers/frame.py +13 -13
  327. endoreg_db/serializers/hardware.py +20 -20
  328. endoreg_db/serializers/label.py +22 -22
  329. endoreg_db/serializers/patient.py +10 -10
  330. endoreg_db/serializers/prediction.py +15 -15
  331. endoreg_db/serializers/report_file.py +7 -7
  332. endoreg_db/serializers/video.py +27 -27
  333. endoreg_db/tests.py +3 -3
  334. endoreg_db/utils/cropping.py +28 -28
  335. endoreg_db/utils/dataloader.py +92 -92
  336. endoreg_db/utils/file_operations.py +30 -30
  337. endoreg_db/utils/hashs.py +33 -33
  338. endoreg_db/utils/legacy_ocr.py +201 -201
  339. endoreg_db/utils/ocr.py +197 -197
  340. endoreg_db/utils/uuid.py +4 -4
  341. endoreg_db/utils/video_metadata.py +87 -87
  342. endoreg_db/views.py +3 -3
  343. {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.7.dist-info}/LICENSE +674 -674
  344. {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.7.dist-info}/METADATA +2 -2
  345. endoreg_db-0.3.7.dist-info/RECORD +363 -0
  346. {endoreg_db-0.3.6.dist-info → endoreg_db-0.3.7.dist-info}/WHEEL +1 -1
  347. endoreg_db-0.3.6.dist-info/RECORD +0 -357
@@ -1,92 +1,92 @@
1
- # g / l and equivalents; ascending by gram, then ascending by liter
2
- - model: endoreg_db.unit
3
- fields:
4
- name: "picogram per mililiter"
5
- name_de: "Pikogramm pro Mililiter"
6
- name_en: "picogram per mililiter"
7
- abbreviation: "pg/ml"
8
-
9
-
10
- - model: endoreg_db.unit
11
- fields:
12
- name: "nanogram per mililiter"
13
- name_de: "Nanogramm pro Mililiter"
14
- name_en: "nanogram per mililiter"
15
- abbreviation: "ng/ml"
16
-
17
- - model: endoreg_db.unit
18
- fields:
19
- name: "nanogram per deciliter"
20
- name_de: "Nanogramm pro Deziliter"
21
- name_en: "nanogram per deciliter"
22
-
23
- - model: endoreg_db.unit
24
- fields:
25
- name: "microgram per mililiter"
26
- name_de: "Microgramm pro Mililiter"
27
- name_en: "microgram per mililiter"
28
- abbreviation: "µg/ml"
29
-
30
- - model: endoreg_db.Unit
31
- fields:
32
- name: "microgram per deciliter"
33
- abbreviation: "µg/dL"
34
- name_de: "Mikrogramm pro Deziliter"
35
- name_en: "microgram per deciliter"
36
- description: "Micrograms per deciliter, a unit of measurement for concentration."
37
-
38
- - model: endoreg_db.unit
39
- fields:
40
- name: "gram per deciliter"
41
- name_de: "Gramm pro Deziliter"
42
- name_en: "gram per deciliter"
43
-
44
-
45
- # mol / l
46
- - model: endoreg_db.Unit
47
- fields:
48
- name: "milimole per liter"
49
- abbreviation: "mmol/L"
50
- name_de: "milimol pro Liter"
51
- name_en: "milimole per liter"
52
- description: "milimoles per liter, a unit of measurement for concentration in blood."
53
-
54
- - model: endoreg_db.Unit
55
- fields:
56
- name: "miliequivalent per liter"
57
- abbreviation: "mEq/L"
58
- name_de: "miliäquivalent pro Liter"
59
- name_en: "miliequivalent per liter"
60
- description: "miliequivalents per liter, used for electrolytes concentration."
61
-
62
- - model: endoreg_db.Unit
63
- fields:
64
- name: "miligram per deciliter"
65
- abbreviation: "mg/dL"
66
- name_de: "miligramm pro Deziliter"
67
- name_en: "miligram per deciliter"
68
- description: "miligrams per deciliter, commonly used for various blood measurements."
69
-
70
- # x 10^9 per liter
71
- - model: endoreg_db.Unit
72
- fields:
73
- name: "x 10^9 per liter"
74
- abbreviation: "x 10^9/L"
75
- name_de: "x 10^9 pro Liter"
76
- name_en: "x 10^9 per liter"
77
- description: "Number of cells per liter, often used for blood cell counts."
78
-
79
- # U / l
80
- - model: endoreg_db.unit
81
- fields:
82
- name: "units per liter"
83
- name_de: "Units pro Liter"
84
- name_en: "units per liter"
85
- abbreviation: "U/l"
86
-
87
- - model: endoreg_db.unit
88
- fields:
89
- name: "microinternational units per mililiter"
90
- name_de: "Mikro-Internationale Einheiten pro Mililiter"
91
- name_en: "micro-international units per mililiter"
92
- abbreviation: "µU/ml"
1
+ # g / l and equivalents; ascending by gram, then ascending by liter
2
+ - model: endoreg_db.unit
3
+ fields:
4
+ name: "picogram per mililiter"
5
+ name_de: "Pikogramm pro Mililiter"
6
+ name_en: "picogram per mililiter"
7
+ abbreviation: "pg/ml"
8
+
9
+
10
+ - model: endoreg_db.unit
11
+ fields:
12
+ name: "nanogram per mililiter"
13
+ name_de: "Nanogramm pro Mililiter"
14
+ name_en: "nanogram per mililiter"
15
+ abbreviation: "ng/ml"
16
+
17
+ - model: endoreg_db.unit
18
+ fields:
19
+ name: "nanogram per deciliter"
20
+ name_de: "Nanogramm pro Deziliter"
21
+ name_en: "nanogram per deciliter"
22
+
23
+ - model: endoreg_db.unit
24
+ fields:
25
+ name: "microgram per mililiter"
26
+ name_de: "Microgramm pro Mililiter"
27
+ name_en: "microgram per mililiter"
28
+ abbreviation: "µg/ml"
29
+
30
+ - model: endoreg_db.Unit
31
+ fields:
32
+ name: "microgram per deciliter"
33
+ abbreviation: "µg/dL"
34
+ name_de: "Mikrogramm pro Deziliter"
35
+ name_en: "microgram per deciliter"
36
+ description: "Micrograms per deciliter, a unit of measurement for concentration."
37
+
38
+ - model: endoreg_db.unit
39
+ fields:
40
+ name: "gram per deciliter"
41
+ name_de: "Gramm pro Deziliter"
42
+ name_en: "gram per deciliter"
43
+
44
+
45
+ # mol / l
46
+ - model: endoreg_db.Unit
47
+ fields:
48
+ name: "milimole per liter"
49
+ abbreviation: "mmol/L"
50
+ name_de: "milimol pro Liter"
51
+ name_en: "milimole per liter"
52
+ description: "milimoles per liter, a unit of measurement for concentration in blood."
53
+
54
+ - model: endoreg_db.Unit
55
+ fields:
56
+ name: "miliequivalent per liter"
57
+ abbreviation: "mEq/L"
58
+ name_de: "miliäquivalent pro Liter"
59
+ name_en: "miliequivalent per liter"
60
+ description: "miliequivalents per liter, used for electrolytes concentration."
61
+
62
+ - model: endoreg_db.Unit
63
+ fields:
64
+ name: "miligram per deciliter"
65
+ abbreviation: "mg/dL"
66
+ name_de: "miligramm pro Deziliter"
67
+ name_en: "miligram per deciliter"
68
+ description: "miligrams per deciliter, commonly used for various blood measurements."
69
+
70
+ # x 10^9 per liter
71
+ - model: endoreg_db.Unit
72
+ fields:
73
+ name: "x 10^9 per liter"
74
+ abbreviation: "x 10^9/L"
75
+ name_de: "x 10^9 pro Liter"
76
+ name_en: "x 10^9 per liter"
77
+ description: "Number of cells per liter, often used for blood cell counts."
78
+
79
+ # U / l
80
+ - model: endoreg_db.unit
81
+ fields:
82
+ name: "units per liter"
83
+ name_de: "Units pro Liter"
84
+ name_en: "units per liter"
85
+ abbreviation: "U/l"
86
+
87
+ - model: endoreg_db.unit
88
+ fields:
89
+ name: "microinternational units per mililiter"
90
+ name_de: "Mikro-Internationale Einheiten pro Mililiter"
91
+ name_en: "micro-international units per mililiter"
92
+ abbreviation: "µU/ml"
@@ -1,17 +1,17 @@
1
- - model: endoreg_db.Unit
2
- fields:
3
- name: "liters-per-minute"
4
- abbreviation: "l/min"
5
- name_de: "Liter pro Minute"
6
- name_en: "Liters per Minute"
7
- description: "liters per minute"
8
-
9
-
10
- # kilowatt-hours
11
- - model: endoreg_db.Unit
12
- fields:
13
- name: "kilowatt-hours"
14
- abbreviation: "kWh"
15
- name_de: "Kilowattstunden"
16
- name_en: "Kilowatt-hours"
17
- description: "kilowatt-hours"
1
+ - model: endoreg_db.Unit
2
+ fields:
3
+ name: "liters-per-minute"
4
+ abbreviation: "l/min"
5
+ name_de: "Liter pro Minute"
6
+ name_en: "Liters per Minute"
7
+ description: "liters per minute"
8
+
9
+
10
+ # kilowatt-hours
11
+ - model: endoreg_db.Unit
12
+ fields:
13
+ name: "kilowatt-hours"
14
+ abbreviation: "kWh"
15
+ name_de: "Kilowattstunden"
16
+ name_en: "Kilowatt-hours"
17
+ description: "kilowatt-hours"
@@ -1,31 +1,31 @@
1
- - model: endoreg_db.Unit
2
- fields:
3
- name: "milimeter"
4
- abbreviation: "mm"
5
- name_de: "milimeter"
6
- name_en: "milimeter"
7
- description: "milimeters"
8
-
9
- - model: endoreg_db.Unit
10
- fields:
11
- name: "centimeter"
12
- abbreviation: "cm"
13
- name_de: "Zentimeter"
14
- name_en: "Centimeter"
15
- description: "centimeters"
16
-
17
- - model: endoreg_db.Unit
18
- fields:
19
- name: "meter"
20
- abbreviation: "m"
21
- name_de: "Meter"
22
- name_en: "Meter"
23
- description: "meters"
24
-
25
- - model: endoreg_db.Unit
26
- fields:
27
- name: "kilometer"
28
- abbreviation: "km"
29
- name_de: "Kilometer"
30
- name_en: "Kilometer"
1
+ - model: endoreg_db.Unit
2
+ fields:
3
+ name: "milimeter"
4
+ abbreviation: "mm"
5
+ name_de: "milimeter"
6
+ name_en: "milimeter"
7
+ description: "milimeters"
8
+
9
+ - model: endoreg_db.Unit
10
+ fields:
11
+ name: "centimeter"
12
+ abbreviation: "cm"
13
+ name_de: "Zentimeter"
14
+ name_en: "Centimeter"
15
+ description: "centimeters"
16
+
17
+ - model: endoreg_db.Unit
18
+ fields:
19
+ name: "meter"
20
+ abbreviation: "m"
21
+ name_de: "Meter"
22
+ name_en: "Meter"
23
+ description: "meters"
24
+
25
+ - model: endoreg_db.Unit
26
+ fields:
27
+ name: "kilometer"
28
+ abbreviation: "km"
29
+ name_de: "Kilometer"
30
+ name_en: "Kilometer"
31
31
  description: "kilometers"
@@ -1,20 +1,20 @@
1
- - model: endoreg_db.unit
2
- fields:
3
- name: "percent"
4
- abbreviation: "%"
5
- name_de: "Prozent"
6
- name_en: "percent"
7
-
8
- - model: endoreg_db.unit
9
- fields:
10
- name: "ratio"
11
- abbreviation: ""
12
- name_de: "Ratio"
13
- name_en: "ratio"
14
-
15
- - model: endoreg_db.unit
16
- fields:
17
- name: "dose"
18
- name_de: "Dosierung(en)"
19
- name_en: "dose(s)"
1
+ - model: endoreg_db.unit
2
+ fields:
3
+ name: "percent"
4
+ abbreviation: "%"
5
+ name_de: "Prozent"
6
+ name_en: "percent"
7
+
8
+ - model: endoreg_db.unit
9
+ fields:
10
+ name: "ratio"
11
+ abbreviation: ""
12
+ name_de: "Ratio"
13
+ name_en: "ratio"
14
+
15
+ - model: endoreg_db.unit
16
+ fields:
17
+ name: "dose"
18
+ name_de: "Dosierung(en)"
19
+ name_en: "dose(s)"
20
20
  abbreviation: ""
@@ -1,6 +1,6 @@
1
- - model: endoreg_db.unit
2
- fields:
3
- name: "mililiter per minute per 1.73m^2"
4
- name_de: "ml/min/1.73m²"
5
- name_en: "ml/min/1.73m²"
1
+ - model: endoreg_db.unit
2
+ fields:
3
+ name: "mililiter per minute per 1.73m^2"
4
+ name_de: "ml/min/1.73m²"
5
+ name_en: "ml/min/1.73m²"
6
6
  abbreviation: "ml/min/1.73m²"
@@ -1,13 +1,13 @@
1
- - model: endoreg_db.unit
2
- fields:
3
- name: "seconds"
4
- abbreviation: "s"
5
- name_de: "Sekunden"
6
- name_en: "Sekunden"
7
-
8
- - model: endoreg_db.unit
9
- fields:
10
- name: "minutes"
11
- abbreviation: "min"
12
- name_de: "Minuten"
1
+ - model: endoreg_db.unit
2
+ fields:
3
+ name: "seconds"
4
+ abbreviation: "s"
5
+ name_de: "Sekunden"
6
+ name_en: "Sekunden"
7
+
8
+ - model: endoreg_db.unit
9
+ fields:
10
+ name: "minutes"
11
+ abbreviation: "min"
12
+ name_de: "Minuten"
13
13
  name_en: "Minutes"
@@ -1,35 +1,35 @@
1
- # Units/data.yaml
2
-
3
- # femptolitre
4
- - model: endoreg_db.Unit
5
- fields:
6
- name: "femtoliter"
7
- abbreviation: "fl"
8
- name_de: "Femtoliter"
9
- name_en: "Femtolitre"
10
- description: "femtoliters"
11
-
12
- - model: endoreg_db.Unit
13
- fields:
14
- name: "mililiter"
15
- abbreviation: "ml"
16
- name_de: "mililiter"
17
- name_en: "mililiter"
18
- description: "mililiters"
19
-
20
- - model: endoreg_db.Unit
21
- fields:
22
- name: "liter"
23
- abbreviation: "l"
24
- name_de: "Liter"
25
- name_en: "Liter"
26
- description: "liters"
27
-
28
- # cubic_meter
29
- - model: endoreg_db.Unit
30
- fields:
31
- name: "cubic_meter"
32
- abbreviation: "m³"
33
- name_de: "Kubikmeter"
34
- name_en: "Cubic Meter"
35
- description: "cubic meters"
1
+ # Units/data.yaml
2
+
3
+ # femptolitre
4
+ - model: endoreg_db.Unit
5
+ fields:
6
+ name: "femtoliter"
7
+ abbreviation: "fl"
8
+ name_de: "Femtoliter"
9
+ name_en: "Femtolitre"
10
+ description: "femtoliters"
11
+
12
+ - model: endoreg_db.Unit
13
+ fields:
14
+ name: "mililiter"
15
+ abbreviation: "ml"
16
+ name_de: "mililiter"
17
+ name_en: "mililiter"
18
+ description: "mililiters"
19
+
20
+ - model: endoreg_db.Unit
21
+ fields:
22
+ name: "liter"
23
+ abbreviation: "l"
24
+ name_de: "Liter"
25
+ name_en: "Liter"
26
+ description: "liters"
27
+
28
+ # cubic_meter
29
+ - model: endoreg_db.Unit
30
+ fields:
31
+ name: "cubic_meter"
32
+ abbreviation: "m³"
33
+ name_de: "Kubikmeter"
34
+ name_en: "Cubic Meter"
35
+ description: "cubic meters"
@@ -1,38 +1,38 @@
1
- - model: endoreg_db.unit
2
- fields:
3
- name: "picogram"
4
- abbreviation: "pg"
5
- name_de: "Picogramm"
6
- name_en: "Picogram"
7
-
8
- - model: endoreg_db.Unit
9
- fields:
10
- name: "microgram"
11
- abbreviation: "µg"
12
- name_de: "Mikrogramm"
13
- name_en: "Microgram"
14
- description: "micrograms"
15
-
16
- - model: endoreg_db.Unit
17
- fields:
18
- name: "miligram"
19
- abbreviation: "mg"
20
- name_de: "miligramm"
21
- name_en: "miligram"
22
- description: "miligrams"
23
-
24
- - model: endoreg_db.Unit
25
- fields:
26
- name: "gram"
27
- abbreviation: "g"
28
- name_de: "Gramm"
29
- name_en: "Gram"
30
- description: "grams"
31
-
32
- - model: endoreg_db.Unit
33
- fields:
34
- name: "kilogram"
35
- abbreviation: "kg"
36
- name_de: "Kilogramm"
37
- name_en: "Kilogram"
1
+ - model: endoreg_db.unit
2
+ fields:
3
+ name: "picogram"
4
+ abbreviation: "pg"
5
+ name_de: "Picogramm"
6
+ name_en: "Picogram"
7
+
8
+ - model: endoreg_db.Unit
9
+ fields:
10
+ name: "microgram"
11
+ abbreviation: "µg"
12
+ name_de: "Mikrogramm"
13
+ name_en: "Microgram"
14
+ description: "micrograms"
15
+
16
+ - model: endoreg_db.Unit
17
+ fields:
18
+ name: "miligram"
19
+ abbreviation: "mg"
20
+ name_de: "miligramm"
21
+ name_en: "miligram"
22
+ description: "miligrams"
23
+
24
+ - model: endoreg_db.Unit
25
+ fields:
26
+ name: "gram"
27
+ abbreviation: "g"
28
+ name_de: "Gramm"
29
+ name_en: "Gram"
30
+ description: "grams"
31
+
32
+ - model: endoreg_db.Unit
33
+ fields:
34
+ name: "kilogram"
35
+ abbreviation: "kg"
36
+ name_de: "Kilogramm"
37
+ name_en: "Kilogram"
38
38
  description: "kilograms"
@@ -1,12 +1,12 @@
1
- - model: endoreg_db.Waste
2
- fields:
3
- name: general_waste
4
- name_de: Allgemeiner Abfall
5
- name_en: General Waste
6
-
7
- - model: endoreg_db.Waste
8
- fields:
9
- name: medical_waste
10
- name_de: Medizinischer Abfall
11
- name_en: Medical Waste
1
+ - model: endoreg_db.Waste
2
+ fields:
3
+ name: general_waste
4
+ name_de: Allgemeiner Abfall
5
+ name_en: General Waste
6
+
7
+ - model: endoreg_db.Waste
8
+ fields:
9
+ name: medical_waste
10
+ name_de: Medizinischer Abfall
11
+ name_en: Medical Waste
12
12
 
@@ -1,3 +1,3 @@
1
- from .unit import Unit
2
- from .settings import ActiveModelForm
1
+ from .unit import Unit
2
+ from .settings import ActiveModelForm
3
3
  from .questionnaires import *
@@ -1,23 +1,23 @@
1
- # Path: endoreg_db/forms/questionnaires/tto_questionnaire.py
2
- from endoreg_db.models import TtoQuestionnaire
3
- from django import forms
4
-
5
- class TtoQuestionnaireForm(forms.ModelForm):
6
- class Meta:
7
- model = TtoQuestionnaire
8
- fields = '__all__'
9
- widgets = {
10
- # Specify Bootstrap classes for other fields as needed
11
- 'patient_name': forms.TextInput(attrs={'class': 'form-control'}),
12
- 'birth_date': forms.DateInput(attrs={'class': 'form-control', 'type': 'date'}),
13
- # You can continue to specify widgets for other fields
14
- }
15
-
16
-
17
- from django.views.generic.edit import CreateView
18
- from django.urls import reverse_lazy
19
-
20
- class TtoQuestionnaireCreate(CreateView):
21
- model = TtoQuestionnaire
22
- form_class = TtoQuestionnaireForm
23
- success_url = reverse_lazy('questionnaire_success') # Redirect to a success page after submission
1
+ # Path: endoreg_db/forms/questionnaires/tto_questionnaire.py
2
+ from endoreg_db.models import TtoQuestionnaire
3
+ from django import forms
4
+
5
+ class TtoQuestionnaireForm(forms.ModelForm):
6
+ class Meta:
7
+ model = TtoQuestionnaire
8
+ fields = '__all__'
9
+ widgets = {
10
+ # Specify Bootstrap classes for other fields as needed
11
+ 'patient_name': forms.TextInput(attrs={'class': 'form-control'}),
12
+ 'birth_date': forms.DateInput(attrs={'class': 'form-control', 'type': 'date'}),
13
+ # You can continue to specify widgets for other fields
14
+ }
15
+
16
+
17
+ from django.views.generic.edit import CreateView
18
+ from django.urls import reverse_lazy
19
+
20
+ class TtoQuestionnaireCreate(CreateView):
21
+ model = TtoQuestionnaire
22
+ form_class = TtoQuestionnaireForm
23
+ success_url = reverse_lazy('questionnaire_success') # Redirect to a success page after submission
@@ -1,8 +1,8 @@
1
- # forms.py
2
- from django import forms
3
- from endoreg_db.models import ActiveModel
4
-
5
- class ActiveModelForm(forms.ModelForm):
6
- class Meta:
7
- model = ActiveModel
8
- fields = ["model_meta"] # Or list the specific fields you want to include in the form.
1
+ # forms.py
2
+ from django import forms
3
+ from endoreg_db.models import ActiveModel
4
+
5
+ class ActiveModelForm(forms.ModelForm):
6
+ class Meta:
7
+ model = ActiveModel
8
+ fields = ["model_meta"] # Or list the specific fields you want to include in the form.
endoreg_db/forms/unit.py CHANGED
@@ -1,6 +1,6 @@
1
- from django import forms
2
- from ..models import Unit
3
-
4
- class UnitForm(forms.Form):
5
- class Meta:
1
+ from django import forms
2
+ from ..models import Unit
3
+
4
+ class UnitForm(forms.Form):
5
+ class Meta:
6
6
  model = Unit