arctrl 3.0.0a3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (456) hide show
  1. arctrl/__init__.py +18 -0
  2. arctrl/py/CWL/__init__.py +0 -0
  3. arctrl/py/CWL/cwltypes.py +150 -0
  4. arctrl/py/CWL/decode.py +973 -0
  5. arctrl/py/CWL/encode.py +1 -0
  6. arctrl/py/CWL/inputs.py +88 -0
  7. arctrl/py/CWL/outputs.py +85 -0
  8. arctrl/py/CWL/requirements.py +77 -0
  9. arctrl/py/CWL/tool_description.py +103 -0
  10. arctrl/py/CWL/workflow_description.py +104 -0
  11. arctrl/py/CWL/workflow_steps.py +113 -0
  12. arctrl/py/Contract/__init__.py +0 -0
  13. arctrl/py/Contract/arc.py +60 -0
  14. arctrl/py/Contract/arc_assay.py +125 -0
  15. arctrl/py/Contract/arc_investigation.py +88 -0
  16. arctrl/py/Contract/arc_run.py +125 -0
  17. arctrl/py/Contract/arc_study.py +126 -0
  18. arctrl/py/Contract/arc_workflow.py +125 -0
  19. arctrl/py/Contract/contract.py +153 -0
  20. arctrl/py/Contract/datamap.py +372 -0
  21. arctrl/py/Contract/git.py +118 -0
  22. arctrl/py/Contract/validation_packages_config.py +107 -0
  23. arctrl/py/ContractIO/__init__.py +0 -0
  24. arctrl/py/ContractIO/contract_io.py +344 -0
  25. arctrl/py/ContractIO/file_system_helper.py +264 -0
  26. arctrl/py/Core/Helper/__init__.py +0 -0
  27. arctrl/py/Core/Helper/collections_.py +438 -0
  28. arctrl/py/Core/Helper/date_time.py +26 -0
  29. arctrl/py/Core/Helper/hash_codes.py +60 -0
  30. arctrl/py/Core/Helper/identifier.py +248 -0
  31. arctrl/py/Core/Helper/orcid.py +42 -0
  32. arctrl/py/Core/Helper/printer.py +13 -0
  33. arctrl/py/Core/Helper/regex.py +554 -0
  34. arctrl/py/Core/Helper/sem_ver.py +71 -0
  35. arctrl/py/Core/Helper/url.py +148 -0
  36. arctrl/py/Core/Process/__init__.py +0 -0
  37. arctrl/py/Core/Process/column_index.py +280 -0
  38. arctrl/py/Core/Process/component.py +200 -0
  39. arctrl/py/Core/Process/factor.py +151 -0
  40. arctrl/py/Core/Process/factor_value.py +182 -0
  41. arctrl/py/Core/Process/material.py +74 -0
  42. arctrl/py/Core/Process/material_attribute.py +95 -0
  43. arctrl/py/Core/Process/material_attribute_value.py +184 -0
  44. arctrl/py/Core/Process/material_type.py +45 -0
  45. arctrl/py/Core/Process/process.py +477 -0
  46. arctrl/py/Core/Process/process_input.py +265 -0
  47. arctrl/py/Core/Process/process_output.py +235 -0
  48. arctrl/py/Core/Process/process_parameter_value.py +200 -0
  49. arctrl/py/Core/Process/process_sequence.py +435 -0
  50. arctrl/py/Core/Process/protocol.py +175 -0
  51. arctrl/py/Core/Process/protocol_parameter.py +98 -0
  52. arctrl/py/Core/Process/sample.py +82 -0
  53. arctrl/py/Core/Process/source.py +62 -0
  54. arctrl/py/Core/Table/__init__.py +0 -0
  55. arctrl/py/Core/Table/arc_table.py +1264 -0
  56. arctrl/py/Core/Table/arc_table_aux.py +575 -0
  57. arctrl/py/Core/Table/arc_tables.py +591 -0
  58. arctrl/py/Core/Table/composite_cell.py +319 -0
  59. arctrl/py/Core/Table/composite_column.py +73 -0
  60. arctrl/py/Core/Table/composite_header.py +739 -0
  61. arctrl/py/Core/__init__.py +0 -0
  62. arctrl/py/Core/arc_types.py +5064 -0
  63. arctrl/py/Core/comment.py +128 -0
  64. arctrl/py/Core/comment_list.py +127 -0
  65. arctrl/py/Core/conversion.py +1313 -0
  66. arctrl/py/Core/data.py +245 -0
  67. arctrl/py/Core/data_context.py +157 -0
  68. arctrl/py/Core/data_file.py +112 -0
  69. arctrl/py/Core/data_map.py +225 -0
  70. arctrl/py/Core/identifier_setters.py +31 -0
  71. arctrl/py/Core/iproperty_value.py +36 -0
  72. arctrl/py/Core/ontology_annotation.py +299 -0
  73. arctrl/py/Core/ontology_source_reference.py +114 -0
  74. arctrl/py/Core/person.py +259 -0
  75. arctrl/py/Core/publication.py +161 -0
  76. arctrl/py/Core/template.py +231 -0
  77. arctrl/py/Core/templates.py +148 -0
  78. arctrl/py/Core/uri.py +11 -0
  79. arctrl/py/Core/value.py +188 -0
  80. arctrl/py/FileSystem/__init__.py +0 -0
  81. arctrl/py/FileSystem/commit.py +21 -0
  82. arctrl/py/FileSystem/default_gitattributes.py +5 -0
  83. arctrl/py/FileSystem/default_gitignore.py +5 -0
  84. arctrl/py/FileSystem/file_system.py +58 -0
  85. arctrl/py/FileSystem/file_system_tree.py +426 -0
  86. arctrl/py/FileSystem/path.py +64 -0
  87. arctrl/py/Json/DataMap/__init__.py +0 -0
  88. arctrl/py/Json/DataMap/data_context.py +101 -0
  89. arctrl/py/Json/DataMap/data_map.py +53 -0
  90. arctrl/py/Json/Process/__init__.py +0 -0
  91. arctrl/py/Json/Process/assay_materials.py +46 -0
  92. arctrl/py/Json/Process/component.py +79 -0
  93. arctrl/py/Json/Process/factor.py +107 -0
  94. arctrl/py/Json/Process/factor_value.py +101 -0
  95. arctrl/py/Json/Process/material.py +226 -0
  96. arctrl/py/Json/Process/material_attribute.py +79 -0
  97. arctrl/py/Json/Process/material_attribute_value.py +101 -0
  98. arctrl/py/Json/Process/material_type.py +53 -0
  99. arctrl/py/Json/Process/process.py +296 -0
  100. arctrl/py/Json/Process/process_input.py +83 -0
  101. arctrl/py/Json/Process/process_output.py +67 -0
  102. arctrl/py/Json/Process/process_parameter_value.py +81 -0
  103. arctrl/py/Json/Process/protocol.py +354 -0
  104. arctrl/py/Json/Process/protocol_parameter.py +79 -0
  105. arctrl/py/Json/Process/sample.py +277 -0
  106. arctrl/py/Json/Process/source.py +214 -0
  107. arctrl/py/Json/Process/study_materials.py +52 -0
  108. arctrl/py/Json/Process/value.py +56 -0
  109. arctrl/py/Json/ROCrate/__init__.py +0 -0
  110. arctrl/py/Json/ROCrate/ldcontext.py +133 -0
  111. arctrl/py/Json/ROCrate/ldgraph.py +111 -0
  112. arctrl/py/Json/ROCrate/ldnode.py +290 -0
  113. arctrl/py/Json/ROCrate/ldref.py +44 -0
  114. arctrl/py/Json/ROCrate/ldvalue.py +102 -0
  115. arctrl/py/Json/Table/__init__.py +0 -0
  116. arctrl/py/Json/Table/arc_table.py +393 -0
  117. arctrl/py/Json/Table/cell_table.py +83 -0
  118. arctrl/py/Json/Table/composite_cell.py +136 -0
  119. arctrl/py/Json/Table/composite_header.py +67 -0
  120. arctrl/py/Json/Table/iotype.py +24 -0
  121. arctrl/py/Json/Table/oatable.py +82 -0
  122. arctrl/py/Json/Table/templates.py +281 -0
  123. arctrl/py/Json/__init__.py +0 -0
  124. arctrl/py/Json/assay.py +600 -0
  125. arctrl/py/Json/comment.py +206 -0
  126. arctrl/py/Json/context/rocrate/__init__.py +0 -0
  127. arctrl/py/Json/context/rocrate/isa_assay_context.py +101 -0
  128. arctrl/py/Json/context/rocrate/isa_comment_context.py +60 -0
  129. arctrl/py/Json/context/rocrate/isa_component_context.py +77 -0
  130. arctrl/py/Json/context/rocrate/isa_data_context.py +74 -0
  131. arctrl/py/Json/context/rocrate/isa_factor_context.py +74 -0
  132. arctrl/py/Json/context/rocrate/isa_factor_value_context.py +84 -0
  133. arctrl/py/Json/context/rocrate/isa_investigation_context.py +110 -0
  134. arctrl/py/Json/context/rocrate/isa_material_attribute_context.py +64 -0
  135. arctrl/py/Json/context/rocrate/isa_material_attribute_value_context.py +80 -0
  136. arctrl/py/Json/context/rocrate/isa_material_context.py +71 -0
  137. arctrl/py/Json/context/rocrate/isa_ontology_annotation_context.py +68 -0
  138. arctrl/py/Json/context/rocrate/isa_ontology_source_reference_context.py +75 -0
  139. arctrl/py/Json/context/rocrate/isa_organization_context.py +55 -0
  140. arctrl/py/Json/context/rocrate/isa_person_context.py +131 -0
  141. arctrl/py/Json/context/rocrate/isa_process_context.py +94 -0
  142. arctrl/py/Json/context/rocrate/isa_process_parameter_value_context.py +80 -0
  143. arctrl/py/Json/context/rocrate/isa_protocol_context.py +97 -0
  144. arctrl/py/Json/context/rocrate/isa_protocol_parameter_context.py +64 -0
  145. arctrl/py/Json/context/rocrate/isa_publication_context.py +78 -0
  146. arctrl/py/Json/context/rocrate/isa_sample_context.py +65 -0
  147. arctrl/py/Json/context/rocrate/isa_source_context.py +66 -0
  148. arctrl/py/Json/context/rocrate/isa_study_context.py +125 -0
  149. arctrl/py/Json/context/rocrate/property_value_context.py +73 -0
  150. arctrl/py/Json/context/rocrate/rocrate_context.py +81 -0
  151. arctrl/py/Json/converter_options.py +23 -0
  152. arctrl/py/Json/data.py +356 -0
  153. arctrl/py/Json/data_file.py +63 -0
  154. arctrl/py/Json/decode.py +155 -0
  155. arctrl/py/Json/encode.py +92 -0
  156. arctrl/py/Json/idtable.py +44 -0
  157. arctrl/py/Json/investigation.py +695 -0
  158. arctrl/py/Json/ontology_annotation.py +404 -0
  159. arctrl/py/Json/ontology_source_reference.py +255 -0
  160. arctrl/py/Json/person.py +658 -0
  161. arctrl/py/Json/property_value.py +359 -0
  162. arctrl/py/Json/publication.py +279 -0
  163. arctrl/py/Json/string_table.py +76 -0
  164. arctrl/py/Json/study.py +793 -0
  165. arctrl/py/JsonIO/DataMap/__init__.py +0 -0
  166. arctrl/py/JsonIO/DataMap/data_map.py +53 -0
  167. arctrl/py/JsonIO/Process/__init__.py +0 -0
  168. arctrl/py/JsonIO/Process/component.py +60 -0
  169. arctrl/py/JsonIO/Process/factor.py +36 -0
  170. arctrl/py/JsonIO/Process/factor_value.py +38 -0
  171. arctrl/py/JsonIO/Process/material.py +60 -0
  172. arctrl/py/JsonIO/Process/material_attribute.py +38 -0
  173. arctrl/py/JsonIO/Process/material_attribute_value.py +60 -0
  174. arctrl/py/JsonIO/Process/material_type.py +36 -0
  175. arctrl/py/JsonIO/Process/process.py +60 -0
  176. arctrl/py/JsonIO/Process/process_input.py +38 -0
  177. arctrl/py/JsonIO/Process/process_output.py +60 -0
  178. arctrl/py/JsonIO/Process/process_parameter_value.py +60 -0
  179. arctrl/py/JsonIO/Process/process_sequence.py +71 -0
  180. arctrl/py/JsonIO/Process/protocol.py +60 -0
  181. arctrl/py/JsonIO/Process/protocol_parameter.py +36 -0
  182. arctrl/py/JsonIO/Process/sample.py +60 -0
  183. arctrl/py/JsonIO/Process/source.py +60 -0
  184. arctrl/py/JsonIO/Process/study_materials.py +52 -0
  185. arctrl/py/JsonIO/Process/value.py +32 -0
  186. arctrl/py/JsonIO/Table/__init__.py +0 -0
  187. arctrl/py/JsonIO/Table/arc_table.py +121 -0
  188. arctrl/py/JsonIO/Table/composite_cell.py +36 -0
  189. arctrl/py/JsonIO/Table/composite_header.py +36 -0
  190. arctrl/py/JsonIO/Table/compression.py +85 -0
  191. arctrl/py/JsonIO/Table/iotype.py +36 -0
  192. arctrl/py/JsonIO/Table/templates.py +113 -0
  193. arctrl/py/JsonIO/__init__.py +0 -0
  194. arctrl/py/JsonIO/assay.py +113 -0
  195. arctrl/py/JsonIO/comment.py +80 -0
  196. arctrl/py/JsonIO/data.py +60 -0
  197. arctrl/py/JsonIO/data_file.py +58 -0
  198. arctrl/py/JsonIO/decode.py +9 -0
  199. arctrl/py/JsonIO/encode.py +1 -0
  200. arctrl/py/JsonIO/investigation.py +113 -0
  201. arctrl/py/JsonIO/ldobject.py +106 -0
  202. arctrl/py/JsonIO/ontology_annotation.py +80 -0
  203. arctrl/py/JsonIO/ontology_source_reference.py +80 -0
  204. arctrl/py/JsonIO/person.py +82 -0
  205. arctrl/py/JsonIO/publication.py +82 -0
  206. arctrl/py/JsonIO/study.py +114 -0
  207. arctrl/py/ROCrate/Generic/__init__.py +0 -0
  208. arctrl/py/ROCrate/Generic/comment.py +131 -0
  209. arctrl/py/ROCrate/Generic/dataset.py +817 -0
  210. arctrl/py/ROCrate/Generic/defined_term.py +131 -0
  211. arctrl/py/ROCrate/Generic/file.py +237 -0
  212. arctrl/py/ROCrate/Generic/lab_process.py +324 -0
  213. arctrl/py/ROCrate/Generic/lab_protocol.py +338 -0
  214. arctrl/py/ROCrate/Generic/organization.py +83 -0
  215. arctrl/py/ROCrate/Generic/person.py +484 -0
  216. arctrl/py/ROCrate/Generic/postal_address.py +195 -0
  217. arctrl/py/ROCrate/Generic/property_value.py +696 -0
  218. arctrl/py/ROCrate/Generic/sample.py +202 -0
  219. arctrl/py/ROCrate/Generic/scholarly_article.py +229 -0
  220. arctrl/py/ROCrate/ISAProfile/__init__.py +0 -0
  221. arctrl/py/ROCrate/ISAProfile/assay.py +70 -0
  222. arctrl/py/ROCrate/ISAProfile/data.py +65 -0
  223. arctrl/py/ROCrate/ISAProfile/dataset.py +24 -0
  224. arctrl/py/ROCrate/ISAProfile/investigation.py +73 -0
  225. arctrl/py/ROCrate/ISAProfile/lab_process.py +162 -0
  226. arctrl/py/ROCrate/ISAProfile/lab_protocol.py +37 -0
  227. arctrl/py/ROCrate/ISAProfile/person.py +72 -0
  228. arctrl/py/ROCrate/ISAProfile/property_value.py +98 -0
  229. arctrl/py/ROCrate/ISAProfile/sample.py +64 -0
  230. arctrl/py/ROCrate/ISAProfile/scholarly_article.py +98 -0
  231. arctrl/py/ROCrate/ISAProfile/study.py +74 -0
  232. arctrl/py/ROCrate/__init__.py +0 -0
  233. arctrl/py/ROCrate/arc_rocrate_metadata.py +39 -0
  234. arctrl/py/ROCrate/dyn_obj_extensions.py +1 -0
  235. arctrl/py/ROCrate/helper.py +8 -0
  236. arctrl/py/ROCrate/ldcontext.py +362 -0
  237. arctrl/py/ROCrate/ldobject.py +1247 -0
  238. arctrl/py/ROCrate/rocrate_context.py +51 -0
  239. arctrl/py/Spreadsheet/AnnotationTable/__init__.py +0 -0
  240. arctrl/py/Spreadsheet/AnnotationTable/arc_table.py +193 -0
  241. arctrl/py/Spreadsheet/AnnotationTable/composite_cell.py +78 -0
  242. arctrl/py/Spreadsheet/AnnotationTable/composite_column.py +210 -0
  243. arctrl/py/Spreadsheet/AnnotationTable/composite_header.py +623 -0
  244. arctrl/py/Spreadsheet/DataMapTable/__init__.py +0 -0
  245. arctrl/py/Spreadsheet/DataMapTable/data_map_column.py +114 -0
  246. arctrl/py/Spreadsheet/DataMapTable/data_map_header.py +618 -0
  247. arctrl/py/Spreadsheet/DataMapTable/data_map_table.py +119 -0
  248. arctrl/py/Spreadsheet/Metadata/__init__.py +0 -0
  249. arctrl/py/Spreadsheet/Metadata/assays.py +125 -0
  250. arctrl/py/Spreadsheet/Metadata/comment.py +77 -0
  251. arctrl/py/Spreadsheet/Metadata/contacts.py +134 -0
  252. arctrl/py/Spreadsheet/Metadata/conversions.py +190 -0
  253. arctrl/py/Spreadsheet/Metadata/design_descriptors.py +34 -0
  254. arctrl/py/Spreadsheet/Metadata/factors.py +107 -0
  255. arctrl/py/Spreadsheet/Metadata/ontology_annotation.py +88 -0
  256. arctrl/py/Spreadsheet/Metadata/ontology_source_reference.py +96 -0
  257. arctrl/py/Spreadsheet/Metadata/protocols.py +146 -0
  258. arctrl/py/Spreadsheet/Metadata/publication.py +122 -0
  259. arctrl/py/Spreadsheet/Metadata/run.py +122 -0
  260. arctrl/py/Spreadsheet/Metadata/sparse_table.py +508 -0
  261. arctrl/py/Spreadsheet/Metadata/study.py +312 -0
  262. arctrl/py/Spreadsheet/Metadata/workflow.py +151 -0
  263. arctrl/py/Spreadsheet/__init__.py +0 -0
  264. arctrl/py/Spreadsheet/arc_assay.py +233 -0
  265. arctrl/py/Spreadsheet/arc_investigation.py +418 -0
  266. arctrl/py/Spreadsheet/arc_run.py +190 -0
  267. arctrl/py/Spreadsheet/arc_study.py +144 -0
  268. arctrl/py/Spreadsheet/arc_workflow.py +176 -0
  269. arctrl/py/Spreadsheet/assembly_info.py +1 -0
  270. arctrl/py/Spreadsheet/collection_aux.py +167 -0
  271. arctrl/py/Spreadsheet/data_map.py +44 -0
  272. arctrl/py/Spreadsheet/template.py +460 -0
  273. arctrl/py/ValidationPackages/__init__.py +0 -0
  274. arctrl/py/ValidationPackages/validation_package.py +82 -0
  275. arctrl/py/ValidationPackages/validation_packages_config.py +132 -0
  276. arctrl/py/WebRequest/__init__.py +0 -0
  277. arctrl/py/WebRequest/web_request.py +9 -0
  278. arctrl/py/WebRequest/web_request_py.py +135 -0
  279. arctrl/py/Yaml/__init__.py +0 -0
  280. arctrl/py/Yaml/decode.py +1 -0
  281. arctrl/py/Yaml/encode.py +10 -0
  282. arctrl/py/Yaml/validation_package.py +77 -0
  283. arctrl/py/Yaml/validation_packages_config.py +86 -0
  284. arctrl/py/__init__.py +0 -0
  285. arctrl/py/arc.py +1400 -0
  286. arctrl/py/column_index.py +280 -0
  287. arctrl/py/conversion.py +2184 -0
  288. arctrl/py/cross_async.py +76 -0
  289. arctrl/py/fable_modules/dynamic_obj/__init__.py +0 -0
  290. arctrl/py/fable_modules/dynamic_obj/dyn_obj.py +136 -0
  291. arctrl/py/fable_modules/dynamic_obj/dynamic_obj.py +415 -0
  292. arctrl/py/fable_modules/dynamic_obj/fable_js.py +1 -0
  293. arctrl/py/fable_modules/dynamic_obj/fable_py.py +288 -0
  294. arctrl/py/fable_modules/dynamic_obj/hash_codes.py +82 -0
  295. arctrl/py/fable_modules/dynamic_obj/property_helper.py +25 -0
  296. arctrl/py/fable_modules/dynamic_obj/reflection_utils.py +87 -0
  297. arctrl/py/fable_modules/fable_library/__init__.py +0 -0
  298. arctrl/py/fable_modules/fable_library/array_.py +1528 -0
  299. arctrl/py/fable_modules/fable_library/async_.py +377 -0
  300. arctrl/py/fable_modules/fable_library/async_builder.py +379 -0
  301. arctrl/py/fable_modules/fable_library/big_int.py +330 -0
  302. arctrl/py/fable_modules/fable_library/bit_converter.py +131 -0
  303. arctrl/py/fable_modules/fable_library/boolean.py +26 -0
  304. arctrl/py/fable_modules/fable_library/char.py +237 -0
  305. arctrl/py/fable_modules/fable_library/choice.py +212 -0
  306. arctrl/py/fable_modules/fable_library/date.py +779 -0
  307. arctrl/py/fable_modules/fable_library/date_offset.py +79 -0
  308. arctrl/py/fable_modules/fable_library/decimal_.py +190 -0
  309. arctrl/py/fable_modules/fable_library/diagnostics.py +54 -0
  310. arctrl/py/fable_modules/fable_library/double.py +87 -0
  311. arctrl/py/fable_modules/fable_library/encoding.py +41 -0
  312. arctrl/py/fable_modules/fable_library/event.py +206 -0
  313. arctrl/py/fable_modules/fable_library/file.py +107 -0
  314. arctrl/py/fable_modules/fable_library/fsharp_collections.py +52 -0
  315. arctrl/py/fable_modules/fable_library/fsharp_core.py +123 -0
  316. arctrl/py/fable_modules/fable_library/global_.py +63 -0
  317. arctrl/py/fable_modules/fable_library/guid.py +41 -0
  318. arctrl/py/fable_modules/fable_library/int32.py +73 -0
  319. arctrl/py/fable_modules/fable_library/list.py +1788 -0
  320. arctrl/py/fable_modules/fable_library/long.py +240 -0
  321. arctrl/py/fable_modules/fable_library/mailbox_processor.py +179 -0
  322. arctrl/py/fable_modules/fable_library/map.py +1854 -0
  323. arctrl/py/fable_modules/fable_library/map_util.py +148 -0
  324. arctrl/py/fable_modules/fable_library/mutable_map.py +397 -0
  325. arctrl/py/fable_modules/fable_library/mutable_set.py +279 -0
  326. arctrl/py/fable_modules/fable_library/native.py +45 -0
  327. arctrl/py/fable_modules/fable_library/numeric.py +46 -0
  328. arctrl/py/fable_modules/fable_library/observable.py +222 -0
  329. arctrl/py/fable_modules/fable_library/option.py +128 -0
  330. arctrl/py/fable_modules/fable_library/path.py +62 -0
  331. arctrl/py/fable_modules/fable_library/range.py +117 -0
  332. arctrl/py/fable_modules/fable_library/reflection.py +463 -0
  333. arctrl/py/fable_modules/fable_library/reg_exp.py +137 -0
  334. arctrl/py/fable_modules/fable_library/resize_array.py +31 -0
  335. arctrl/py/fable_modules/fable_library/result.py +212 -0
  336. arctrl/py/fable_modules/fable_library/seq.py +1979 -0
  337. arctrl/py/fable_modules/fable_library/seq2.py +221 -0
  338. arctrl/py/fable_modules/fable_library/set.py +2414 -0
  339. arctrl/py/fable_modules/fable_library/singleton_local_time_zone.py +36 -0
  340. arctrl/py/fable_modules/fable_library/string_.py +573 -0
  341. arctrl/py/fable_modules/fable_library/system_collections_generic.py +462 -0
  342. arctrl/py/fable_modules/fable_library/system_text.py +237 -0
  343. arctrl/py/fable_modules/fable_library/task.py +116 -0
  344. arctrl/py/fable_modules/fable_library/task_builder.py +122 -0
  345. arctrl/py/fable_modules/fable_library/thread.py +5 -0
  346. arctrl/py/fable_modules/fable_library/time_span.py +283 -0
  347. arctrl/py/fable_modules/fable_library/timer.py +24 -0
  348. arctrl/py/fable_modules/fable_library/types.py +401 -0
  349. arctrl/py/fable_modules/fable_library/uri.py +109 -0
  350. arctrl/py/fable_modules/fable_library/util.py +2735 -0
  351. arctrl/py/fable_modules/fable_openpyxl/__init__.py +0 -0
  352. arctrl/py/fable_modules/fable_openpyxl/openpyxl.py +362 -0
  353. arctrl/py/fable_modules/fable_python/cognite-sdk/__init__.py +0 -0
  354. arctrl/py/fable_modules/fable_python/cognite-sdk/cognite_sdk.py +22 -0
  355. arctrl/py/fable_modules/fable_python/flask/__init__.py +0 -0
  356. arctrl/py/fable_modules/fable_python/flask/flask.py +34 -0
  357. arctrl/py/fable_modules/fable_python/jupyter/__init__.py +0 -0
  358. arctrl/py/fable_modules/fable_python/jupyter/ipy_widgets.py +47 -0
  359. arctrl/py/fable_modules/fable_python/jupyter/ipython.py +13 -0
  360. arctrl/py/fable_modules/fable_python/stdlib/__init__.py +0 -0
  361. arctrl/py/fable_modules/fable_python/stdlib/ast.py +1 -0
  362. arctrl/py/fable_modules/fable_python/stdlib/asyncio/__init__.py +0 -0
  363. arctrl/py/fable_modules/fable_python/stdlib/asyncio/events.py +17 -0
  364. arctrl/py/fable_modules/fable_python/stdlib/asyncio/futures.py +52 -0
  365. arctrl/py/fable_modules/fable_python/stdlib/asyncio/tasks.py +38 -0
  366. arctrl/py/fable_modules/fable_python/stdlib/base64_.py +1 -0
  367. arctrl/py/fable_modules/fable_python/stdlib/builtins_.py +38 -0
  368. arctrl/py/fable_modules/fable_python/stdlib/html.py +1 -0
  369. arctrl/py/fable_modules/fable_python/stdlib/json.py +1 -0
  370. arctrl/py/fable_modules/fable_python/stdlib/math_.py +1 -0
  371. arctrl/py/fable_modules/fable_python/stdlib/os_.py +1 -0
  372. arctrl/py/fable_modules/fable_python/stdlib/queue_.py +1 -0
  373. arctrl/py/fable_modules/fable_python/stdlib/string_.py +1 -0
  374. arctrl/py/fable_modules/fable_python/stdlib/sys_.py +30 -0
  375. arctrl/py/fable_modules/fable_python/stdlib/time_.py +1 -0
  376. arctrl/py/fable_modules/fable_python/stdlib/tk_inter.py +1 -0
  377. arctrl/py/fable_modules/fs_spreadsheet/Cells/__init__.py +0 -0
  378. arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cell.py +338 -0
  379. arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +469 -0
  380. arctrl/py/fable_modules/fs_spreadsheet/DSL/__init__.py +0 -0
  381. arctrl/py/fable_modules/fs_spreadsheet/DSL/cell_builder.py +214 -0
  382. arctrl/py/fable_modules/fs_spreadsheet/DSL/column_builder.py +139 -0
  383. arctrl/py/fable_modules/fs_spreadsheet/DSL/dsl.py +50 -0
  384. arctrl/py/fable_modules/fs_spreadsheet/DSL/expression.py +65 -0
  385. arctrl/py/fable_modules/fs_spreadsheet/DSL/operators.py +9 -0
  386. arctrl/py/fable_modules/fs_spreadsheet/DSL/row_builder.py +139 -0
  387. arctrl/py/fable_modules/fs_spreadsheet/DSL/sheet_builder.py +118 -0
  388. arctrl/py/fable_modules/fs_spreadsheet/DSL/table_builder.py +122 -0
  389. arctrl/py/fable_modules/fs_spreadsheet/DSL/transform.py +464 -0
  390. arctrl/py/fable_modules/fs_spreadsheet/DSL/types.py +314 -0
  391. arctrl/py/fable_modules/fs_spreadsheet/DSL/workbook_builder.py +106 -0
  392. arctrl/py/fable_modules/fs_spreadsheet/Json/__init__.py +0 -0
  393. arctrl/py/fable_modules/fs_spreadsheet/Json/cell.py +103 -0
  394. arctrl/py/fable_modules/fs_spreadsheet/Json/column.py +70 -0
  395. arctrl/py/fable_modules/fs_spreadsheet/Json/row.py +70 -0
  396. arctrl/py/fable_modules/fs_spreadsheet/Json/table.py +57 -0
  397. arctrl/py/fable_modules/fs_spreadsheet/Json/value.py +93 -0
  398. arctrl/py/fable_modules/fs_spreadsheet/Json/workbook.py +71 -0
  399. arctrl/py/fable_modules/fs_spreadsheet/Json/worksheet.py +217 -0
  400. arctrl/py/fable_modules/fs_spreadsheet/Ranges/__init__.py +0 -0
  401. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range.py +47 -0
  402. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +186 -0
  403. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +90 -0
  404. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_column.py +78 -0
  405. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +48 -0
  406. arctrl/py/fable_modules/fs_spreadsheet/Tables/__init__.py +0 -0
  407. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table.py +393 -0
  408. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_field.py +127 -0
  409. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_row.py +23 -0
  410. arctrl/py/fable_modules/fs_spreadsheet/__init__.py +0 -0
  411. arctrl/py/fable_modules/fs_spreadsheet/fs_address.py +218 -0
  412. arctrl/py/fable_modules/fs_spreadsheet/fs_column.py +172 -0
  413. arctrl/py/fable_modules/fs_spreadsheet/fs_row.py +183 -0
  414. arctrl/py/fable_modules/fs_spreadsheet/fs_workbook.py +180 -0
  415. arctrl/py/fable_modules/fs_spreadsheet/fs_worksheet.py +600 -0
  416. arctrl/py/fable_modules/fs_spreadsheet/sheet_builder.py +330 -0
  417. arctrl/py/fable_modules/fs_spreadsheet_py/__init__.py +0 -0
  418. arctrl/py/fable_modules/fs_spreadsheet_py/cell.py +63 -0
  419. arctrl/py/fable_modules/fs_spreadsheet_py/cell_type.py +50 -0
  420. arctrl/py/fable_modules/fs_spreadsheet_py/fs_extension.py +60 -0
  421. arctrl/py/fable_modules/fs_spreadsheet_py/json.py +47 -0
  422. arctrl/py/fable_modules/fs_spreadsheet_py/table.py +53 -0
  423. arctrl/py/fable_modules/fs_spreadsheet_py/workbook.py +40 -0
  424. arctrl/py/fable_modules/fs_spreadsheet_py/worksheet.py +54 -0
  425. arctrl/py/fable_modules/fs_spreadsheet_py/xlsx.py +37 -0
  426. arctrl/py/fable_modules/thoth_json_core/__init__.py +0 -0
  427. arctrl/py/fable_modules/thoth_json_core/decode.py +1588 -0
  428. arctrl/py/fable_modules/thoth_json_core/encode.py +261 -0
  429. arctrl/py/fable_modules/thoth_json_core/types.py +181 -0
  430. arctrl/py/fable_modules/thoth_json_python/__init__.py +0 -0
  431. arctrl/py/fable_modules/thoth_json_python/decode.py +112 -0
  432. arctrl/py/fable_modules/thoth_json_python/encode.py +72 -0
  433. arctrl/py/fable_modules/thoth_json_python/python.py +1 -0
  434. arctrl/py/fable_modules/yamlicious/Interop/__init__.py +0 -0
  435. arctrl/py/fable_modules/yamlicious/Interop/js_interop.py +1 -0
  436. arctrl/py/fable_modules/yamlicious/Interop/py_interop.py +7 -0
  437. arctrl/py/fable_modules/yamlicious/__init__.py +0 -0
  438. arctrl/py/fable_modules/yamlicious/decode.py +1784 -0
  439. arctrl/py/fable_modules/yamlicious/encode.py +84 -0
  440. arctrl/py/fable_modules/yamlicious/library.py +10 -0
  441. arctrl/py/fable_modules/yamlicious/persil.py +57 -0
  442. arctrl/py/fable_modules/yamlicious/preprocessing.py +99 -0
  443. arctrl/py/fable_modules/yamlicious/reader.py +665 -0
  444. arctrl/py/fable_modules/yamlicious/regex.py +21 -0
  445. arctrl/py/fable_modules/yamlicious/regex_active_patterns.py +256 -0
  446. arctrl/py/fable_modules/yamlicious/writer.py +175 -0
  447. arctrl/py/fable_modules/yamlicious/yamlicious_types.py +128 -0
  448. arctrl/py/json.py +213 -0
  449. arctrl/py/rocrate_io.py +72 -0
  450. arctrl/py/template_web.py +23 -0
  451. arctrl/py/xlsx.py +148 -0
  452. arctrl/rocrate.py +21 -0
  453. arctrl-3.0.0a3.dist-info/LICENSE +21 -0
  454. arctrl-3.0.0a3.dist-info/METADATA +119 -0
  455. arctrl-3.0.0a3.dist-info/RECORD +456 -0
  456. arctrl-3.0.0a3.dist-info/WHEEL +4 -0
@@ -0,0 +1,106 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import Any
4
+ from ..Json.encode import default_spaces
5
+ from ..Json.ROCrate.ldgraph import (decoder as decoder_2, encoder as encoder_1)
6
+ from ..Json.ROCrate.ldnode import (decoder as decoder_1, encoder)
7
+ from ..ROCrate.ldobject import (LDNode, LDGraph)
8
+ from ..fable_modules.fable_library.reflection import (TypeInfo, class_type)
9
+ from ..fable_modules.fable_library.result import FSharpResult_2
10
+ from ..fable_modules.fable_library.string_ import (to_text, printf)
11
+ from ..fable_modules.thoth_json_core.types import IEncodable
12
+ from ..fable_modules.thoth_json_python.decode import Decode_fromString
13
+ from ..fable_modules.thoth_json_python.encode import to_string
14
+
15
+ def ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5(s: str) -> LDNode:
16
+ match_value: FSharpResult_2[LDNode, str] = Decode_fromString(decoder_1, s)
17
+ if match_value.tag == 1:
18
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
19
+
20
+ else:
21
+ return match_value.fields[0]
22
+
23
+
24
+
25
+ def ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[LDNode], str]:
26
+ def _arrow3574(obj: LDNode, spaces: Any=spaces) -> str:
27
+ value: IEncodable = encoder(obj)
28
+ return to_string(default_spaces(spaces), value)
29
+
30
+ return _arrow3574
31
+
32
+
33
+ def ARCtrl_ROCrate_LDNode__LDNode_ToROCrateJsonString_71136F3F(this: LDNode, spaces: int | None=None) -> str:
34
+ return ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F(spaces)(this)
35
+
36
+
37
+ def _expr3575() -> TypeInfo:
38
+ return class_type("ARCtrl.Json.LDNodeExtensions.PyJsInterop", None, LDNodeExtensions_PyJsInterop)
39
+
40
+
41
+ class LDNodeExtensions_PyJsInterop:
42
+ @staticmethod
43
+ def from_rocrate_json_string(s: str) -> LDNode:
44
+ match_value: FSharpResult_2[LDNode, str] = Decode_fromString(decoder_1, s)
45
+ if match_value.tag == 1:
46
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
47
+
48
+ else:
49
+ return match_value.fields[0]
50
+
51
+
52
+ @staticmethod
53
+ def to_rocrate_json_string(node: LDNode, spaces: int | None=None) -> str:
54
+ value: IEncodable = encoder(node)
55
+ return to_string(default_spaces(spaces), value)
56
+
57
+
58
+ LDNodeExtensions_PyJsInterop_reflection = _expr3575
59
+
60
+ def ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5(s: str) -> LDGraph:
61
+ match_value: FSharpResult_2[LDGraph, str] = Decode_fromString(decoder_2, s)
62
+ if match_value.tag == 1:
63
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
64
+
65
+ else:
66
+ return match_value.fields[0]
67
+
68
+
69
+
70
+ def ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[LDGraph], str]:
71
+ def _arrow3576(obj: LDGraph, spaces: Any=spaces) -> str:
72
+ value: IEncodable = encoder_1(obj)
73
+ return to_string(default_spaces(spaces), value)
74
+
75
+ return _arrow3576
76
+
77
+
78
+ def ARCtrl_ROCrate_LDGraph__LDGraph_ToROCrateJsonString_71136F3F(this: LDGraph, spaces: int | None=None) -> str:
79
+ return ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F(spaces)(this)
80
+
81
+
82
+ def _expr3577() -> TypeInfo:
83
+ return class_type("ARCtrl.Json.LDGraphExtensions.PyJsInterop", None, LDGraphExtensions_PyJsInterop)
84
+
85
+
86
+ class LDGraphExtensions_PyJsInterop:
87
+ @staticmethod
88
+ def from_rocrate_json_string(s: str) -> LDGraph:
89
+ match_value: FSharpResult_2[LDGraph, str] = Decode_fromString(decoder_2, s)
90
+ if match_value.tag == 1:
91
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
92
+
93
+ else:
94
+ return match_value.fields[0]
95
+
96
+
97
+ @staticmethod
98
+ def to_rocrate_json_string(graph: LDGraph, spaces: int | None=None) -> str:
99
+ value: IEncodable = encoder_1(graph)
100
+ return to_string(default_spaces(spaces), value)
101
+
102
+
103
+ LDGraphExtensions_PyJsInterop_reflection = _expr3577
104
+
105
+ __all__ = ["ARCtrl_ROCrate_LDNode__LDNode_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_ROCrate_LDNode__LDNode_toROCrateJsonString_Static_71136F3F", "ARCtrl_ROCrate_LDNode__LDNode_ToROCrateJsonString_71136F3F", "LDNodeExtensions_PyJsInterop_reflection", "ARCtrl_ROCrate_LDGraph__LDGraph_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_ROCrate_LDGraph__LDGraph_toROCrateJsonString_Static_71136F3F", "ARCtrl_ROCrate_LDGraph__LDGraph_ToROCrateJsonString_71136F3F", "LDGraphExtensions_PyJsInterop_reflection"]
106
+
@@ -0,0 +1,80 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import Any
4
+ from ..Core.ontology_annotation import OntologyAnnotation
5
+ from ..Json.encode import default_spaces
6
+ from ..Json.ontology_annotation import (OntologyAnnotation_decoder, OntologyAnnotation_encoder, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder)
7
+ from ..fable_modules.fable_library.result import FSharpResult_2
8
+ from ..fable_modules.fable_library.string_ import (to_text, printf)
9
+ from ..fable_modules.thoth_json_core.types import IEncodable
10
+ from ..fable_modules.thoth_json_python.decode import Decode_fromString
11
+ from ..fable_modules.thoth_json_python.encode import to_string
12
+
13
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_fromJsonString_Static_Z721C83C5(s: str) -> OntologyAnnotation:
14
+ match_value: FSharpResult_2[OntologyAnnotation, str] = Decode_fromString(OntologyAnnotation_decoder, s)
15
+ if match_value.tag == 1:
16
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
17
+
18
+ else:
19
+ return match_value.fields[0]
20
+
21
+
22
+
23
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_toJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[OntologyAnnotation], str]:
24
+ def _arrow3491(obj: OntologyAnnotation, spaces: Any=spaces) -> str:
25
+ value: IEncodable = OntologyAnnotation_encoder(obj)
26
+ return to_string(default_spaces(spaces), value)
27
+
28
+ return _arrow3491
29
+
30
+
31
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_ToJsonString_71136F3F(this: OntologyAnnotation, spaces: int | None=None) -> str:
32
+ return ARCtrl_OntologyAnnotation__OntologyAnnotation_toJsonString_Static_71136F3F(spaces)(this)
33
+
34
+
35
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_fromROCrateJsonString_Static_Z721C83C5(s: str) -> OntologyAnnotation:
36
+ match_value: FSharpResult_2[OntologyAnnotation, str] = Decode_fromString(OntologyAnnotation_ROCrate_decoderDefinedTerm, s)
37
+ if match_value.tag == 1:
38
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
39
+
40
+ else:
41
+ return match_value.fields[0]
42
+
43
+
44
+
45
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_toROCrateJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[OntologyAnnotation], str]:
46
+ def _arrow3492(obj: OntologyAnnotation, spaces: Any=spaces) -> str:
47
+ value: IEncodable = OntologyAnnotation_ROCrate_encoderDefinedTerm(obj)
48
+ return to_string(default_spaces(spaces), value)
49
+
50
+ return _arrow3492
51
+
52
+
53
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_ToROCrateJsonString_71136F3F(this: OntologyAnnotation, spaces: int | None=None) -> str:
54
+ return ARCtrl_OntologyAnnotation__OntologyAnnotation_toROCrateJsonString_Static_71136F3F(spaces)(this)
55
+
56
+
57
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_fromISAJsonString_Static_Z721C83C5(s: str) -> OntologyAnnotation:
58
+ match_value: FSharpResult_2[OntologyAnnotation, str] = Decode_fromString(OntologyAnnotation_ISAJson_decoder, s)
59
+ if match_value.tag == 1:
60
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
61
+
62
+ else:
63
+ return match_value.fields[0]
64
+
65
+
66
+
67
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_toISAJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[OntologyAnnotation], str]:
68
+ def _arrow3493(obj: OntologyAnnotation, spaces: Any=spaces) -> str:
69
+ value: IEncodable = OntologyAnnotation_ISAJson_encoder(None, obj)
70
+ return to_string(default_spaces(spaces), value)
71
+
72
+ return _arrow3493
73
+
74
+
75
+ def ARCtrl_OntologyAnnotation__OntologyAnnotation_ToISAJsonString_71136F3F(this: OntologyAnnotation, spaces: int | None=None) -> str:
76
+ return ARCtrl_OntologyAnnotation__OntologyAnnotation_toISAJsonString_Static_71136F3F(spaces)(this)
77
+
78
+
79
+ __all__ = ["ARCtrl_OntologyAnnotation__OntologyAnnotation_fromJsonString_Static_Z721C83C5", "ARCtrl_OntologyAnnotation__OntologyAnnotation_toJsonString_Static_71136F3F", "ARCtrl_OntologyAnnotation__OntologyAnnotation_ToJsonString_71136F3F", "ARCtrl_OntologyAnnotation__OntologyAnnotation_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_OntologyAnnotation__OntologyAnnotation_toROCrateJsonString_Static_71136F3F", "ARCtrl_OntologyAnnotation__OntologyAnnotation_ToROCrateJsonString_71136F3F", "ARCtrl_OntologyAnnotation__OntologyAnnotation_fromISAJsonString_Static_Z721C83C5", "ARCtrl_OntologyAnnotation__OntologyAnnotation_toISAJsonString_Static_71136F3F", "ARCtrl_OntologyAnnotation__OntologyAnnotation_ToISAJsonString_71136F3F"]
80
+
@@ -0,0 +1,80 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import Any
4
+ from ..Core.ontology_source_reference import OntologySourceReference
5
+ from ..Json.encode import default_spaces
6
+ from ..Json.ontology_source_reference import (decoder as decoder_1, encoder, ROCrate_decoder, ROCrate_encoder, ISAJson_decoder, ISAJson_encoder)
7
+ from ..fable_modules.fable_library.result import FSharpResult_2
8
+ from ..fable_modules.fable_library.string_ import (to_text, printf)
9
+ from ..fable_modules.thoth_json_core.types import IEncodable
10
+ from ..fable_modules.thoth_json_python.decode import Decode_fromString
11
+ from ..fable_modules.thoth_json_python.encode import to_string
12
+
13
+ def ARCtrl_OntologySourceReference__OntologySourceReference_fromJsonString_Static_Z721C83C5(s: str) -> OntologySourceReference:
14
+ match_value: FSharpResult_2[OntologySourceReference, str] = Decode_fromString(decoder_1, s)
15
+ if match_value.tag == 1:
16
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
17
+
18
+ else:
19
+ return match_value.fields[0]
20
+
21
+
22
+
23
+ def ARCtrl_OntologySourceReference__OntologySourceReference_toJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[OntologySourceReference], str]:
24
+ def _arrow3494(obj: OntologySourceReference, spaces: Any=spaces) -> str:
25
+ value: IEncodable = encoder(obj)
26
+ return to_string(default_spaces(spaces), value)
27
+
28
+ return _arrow3494
29
+
30
+
31
+ def ARCtrl_OntologySourceReference__OntologySourceReference_ToJsonString_71136F3F(this: OntologySourceReference, spaces: int | None=None) -> str:
32
+ return ARCtrl_OntologySourceReference__OntologySourceReference_toJsonString_Static_71136F3F(spaces)(this)
33
+
34
+
35
+ def ARCtrl_OntologySourceReference__OntologySourceReference_fromROCrateJsonString_Static_Z721C83C5(s: str) -> OntologySourceReference:
36
+ match_value: FSharpResult_2[OntologySourceReference, str] = Decode_fromString(ROCrate_decoder, s)
37
+ if match_value.tag == 1:
38
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
39
+
40
+ else:
41
+ return match_value.fields[0]
42
+
43
+
44
+
45
+ def ARCtrl_OntologySourceReference__OntologySourceReference_toROCrateJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[OntologySourceReference], str]:
46
+ def _arrow3495(obj: OntologySourceReference, spaces: Any=spaces) -> str:
47
+ value: IEncodable = ROCrate_encoder(obj)
48
+ return to_string(default_spaces(spaces), value)
49
+
50
+ return _arrow3495
51
+
52
+
53
+ def ARCtrl_OntologySourceReference__OntologySourceReference_ToROCrateJsonString_71136F3F(this: OntologySourceReference, spaces: int | None=None) -> str:
54
+ return ARCtrl_OntologySourceReference__OntologySourceReference_toROCrateJsonString_Static_71136F3F(spaces)(this)
55
+
56
+
57
+ def ARCtrl_OntologySourceReference__OntologySourceReference_fromISAJsonString_Static_Z721C83C5(s: str) -> OntologySourceReference:
58
+ match_value: FSharpResult_2[OntologySourceReference, str] = Decode_fromString(ISAJson_decoder, s)
59
+ if match_value.tag == 1:
60
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
61
+
62
+ else:
63
+ return match_value.fields[0]
64
+
65
+
66
+
67
+ def ARCtrl_OntologySourceReference__OntologySourceReference_toISAJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[OntologySourceReference], str]:
68
+ def _arrow3496(obj: OntologySourceReference, spaces: Any=spaces) -> str:
69
+ value: IEncodable = ISAJson_encoder(None, obj)
70
+ return to_string(default_spaces(spaces), value)
71
+
72
+ return _arrow3496
73
+
74
+
75
+ def ARCtrl_OntologySourceReference__OntologySourceReference_ToISAJsonString_71136F3F(this: OntologySourceReference, spaces: int | None=None) -> str:
76
+ return ARCtrl_OntologySourceReference__OntologySourceReference_toISAJsonString_Static_71136F3F(spaces)(this)
77
+
78
+
79
+ __all__ = ["ARCtrl_OntologySourceReference__OntologySourceReference_fromJsonString_Static_Z721C83C5", "ARCtrl_OntologySourceReference__OntologySourceReference_toJsonString_Static_71136F3F", "ARCtrl_OntologySourceReference__OntologySourceReference_ToJsonString_71136F3F", "ARCtrl_OntologySourceReference__OntologySourceReference_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_OntologySourceReference__OntologySourceReference_toROCrateJsonString_Static_71136F3F", "ARCtrl_OntologySourceReference__OntologySourceReference_ToROCrateJsonString_71136F3F", "ARCtrl_OntologySourceReference__OntologySourceReference_fromISAJsonString_Static_Z721C83C5", "ARCtrl_OntologySourceReference__OntologySourceReference_toISAJsonString_Static_71136F3F", "ARCtrl_OntologySourceReference__OntologySourceReference_ToISAJsonString_71136F3F"]
80
+
@@ -0,0 +1,82 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import Any
4
+ from ..Core.person import Person
5
+ from ..Json.encode import default_spaces
6
+ from ..Json.person import (decoder as decoder_1, encoder, ROCrate_decoder, ROCrate_encoder, ISAJson_decoder, ISAJson_encoder)
7
+ from ..fable_modules.fable_library.option import default_arg
8
+ from ..fable_modules.fable_library.result import FSharpResult_2
9
+ from ..fable_modules.fable_library.string_ import (to_text, printf)
10
+ from ..fable_modules.thoth_json_core.types import IEncodable
11
+ from ..fable_modules.thoth_json_python.decode import Decode_fromString
12
+ from ..fable_modules.thoth_json_python.encode import to_string
13
+
14
+ def ARCtrl_Person__Person_fromJsonString_Static_Z721C83C5(s: str) -> Person:
15
+ match_value: FSharpResult_2[Person, str] = Decode_fromString(decoder_1, s)
16
+ if match_value.tag == 1:
17
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
18
+
19
+ else:
20
+ return match_value.fields[0]
21
+
22
+
23
+
24
+ def ARCtrl_Person__Person_toJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[Person], str]:
25
+ def _arrow3501(obj: Person, spaces: Any=spaces) -> str:
26
+ value: IEncodable = encoder(obj)
27
+ return to_string(default_spaces(spaces), value)
28
+
29
+ return _arrow3501
30
+
31
+
32
+ def ARCtrl_Person__Person_toJsonString_71136F3F(this: Person, spaces: int | None=None) -> str:
33
+ return ARCtrl_Person__Person_toJsonString_Static_71136F3F(spaces)(this)
34
+
35
+
36
+ def ARCtrl_Person__Person_fromROCrateJsonString_Static_Z721C83C5(s: str) -> Person:
37
+ match_value: FSharpResult_2[Person, str] = Decode_fromString(ROCrate_decoder, s)
38
+ if match_value.tag == 1:
39
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
40
+
41
+ else:
42
+ return match_value.fields[0]
43
+
44
+
45
+
46
+ def ARCtrl_Person__Person_toROCrateJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[Person], str]:
47
+ def _arrow3502(obj: Person, spaces: Any=spaces) -> str:
48
+ value: IEncodable = ROCrate_encoder(obj)
49
+ return to_string(default_spaces(spaces), value)
50
+
51
+ return _arrow3502
52
+
53
+
54
+ def ARCtrl_Person__Person_toROCrateJsonString_71136F3F(this: Person, spaces: int | None=None) -> str:
55
+ return ARCtrl_Person__Person_toROCrateJsonString_Static_71136F3F(spaces)(this)
56
+
57
+
58
+ def ARCtrl_Person__Person_fromISAJsonString_Static_Z721C83C5(s: str) -> Person:
59
+ match_value: FSharpResult_2[Person, str] = Decode_fromString(ISAJson_decoder, s)
60
+ if match_value.tag == 1:
61
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
62
+
63
+ else:
64
+ return match_value.fields[0]
65
+
66
+
67
+
68
+ def ARCtrl_Person__Person_toISAJsonString_Static_Z3B036AA(spaces: int | None=None, use_idreferencing: bool | None=None) -> Callable[[Person], str]:
69
+ id_map: Any | None = dict([]) if default_arg(use_idreferencing, False) else None
70
+ def _arrow3503(obj: Person, spaces: Any=spaces, use_idreferencing: Any=use_idreferencing) -> str:
71
+ value: IEncodable = ISAJson_encoder(id_map, obj)
72
+ return to_string(default_spaces(spaces), value)
73
+
74
+ return _arrow3503
75
+
76
+
77
+ def ARCtrl_Person__Person_toISAJsonString_Z3B036AA(this: Person, spaces: int | None=None, use_idreferencing: bool | None=None) -> str:
78
+ return ARCtrl_Person__Person_toISAJsonString_Static_Z3B036AA(spaces, use_idreferencing)(this)
79
+
80
+
81
+ __all__ = ["ARCtrl_Person__Person_fromJsonString_Static_Z721C83C5", "ARCtrl_Person__Person_toJsonString_Static_71136F3F", "ARCtrl_Person__Person_toJsonString_71136F3F", "ARCtrl_Person__Person_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_Person__Person_toROCrateJsonString_Static_71136F3F", "ARCtrl_Person__Person_toROCrateJsonString_71136F3F", "ARCtrl_Person__Person_fromISAJsonString_Static_Z721C83C5", "ARCtrl_Person__Person_toISAJsonString_Static_Z3B036AA", "ARCtrl_Person__Person_toISAJsonString_Z3B036AA"]
82
+
@@ -0,0 +1,82 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import Any
4
+ from ..Core.publication import Publication
5
+ from ..Json.encode import default_spaces
6
+ from ..Json.publication import (decoder as decoder_1, encoder, ROCrate_decoder, ROCrate_encoder, ISAJson_decoder, ISAJson_encoder)
7
+ from ..fable_modules.fable_library.option import default_arg
8
+ from ..fable_modules.fable_library.result import FSharpResult_2
9
+ from ..fable_modules.fable_library.string_ import (to_text, printf)
10
+ from ..fable_modules.thoth_json_core.types import IEncodable
11
+ from ..fable_modules.thoth_json_python.decode import Decode_fromString
12
+ from ..fable_modules.thoth_json_python.encode import to_string
13
+
14
+ def ARCtrl_Publication__Publication_fromJsonString_Static_Z721C83C5(s: str) -> Publication:
15
+ match_value: FSharpResult_2[Publication, str] = Decode_fromString(decoder_1, s)
16
+ if match_value.tag == 1:
17
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
18
+
19
+ else:
20
+ return match_value.fields[0]
21
+
22
+
23
+
24
+ def ARCtrl_Publication__Publication_toJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[Publication], str]:
25
+ def _arrow3504(obj: Publication, spaces: Any=spaces) -> str:
26
+ value: IEncodable = encoder(obj)
27
+ return to_string(default_spaces(spaces), value)
28
+
29
+ return _arrow3504
30
+
31
+
32
+ def ARCtrl_Publication__Publication_ToJsonString_71136F3F(this: Publication, spaces: int | None=None) -> str:
33
+ return ARCtrl_Publication__Publication_toJsonString_Static_71136F3F(spaces)(this)
34
+
35
+
36
+ def ARCtrl_Publication__Publication_fromROCrateJsonString_Static_Z721C83C5(s: str) -> Publication:
37
+ match_value: FSharpResult_2[Publication, str] = Decode_fromString(ROCrate_decoder, s)
38
+ if match_value.tag == 1:
39
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
40
+
41
+ else:
42
+ return match_value.fields[0]
43
+
44
+
45
+
46
+ def ARCtrl_Publication__Publication_toROCrateJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[Publication], str]:
47
+ def _arrow3505(obj: Publication, spaces: Any=spaces) -> str:
48
+ value: IEncodable = ROCrate_encoder(obj)
49
+ return to_string(default_spaces(spaces), value)
50
+
51
+ return _arrow3505
52
+
53
+
54
+ def ARCtrl_Publication__Publication_ToROCrateJsonString_71136F3F(this: Publication, spaces: int | None=None) -> str:
55
+ return ARCtrl_Publication__Publication_toROCrateJsonString_Static_71136F3F(spaces)(this)
56
+
57
+
58
+ def ARCtrl_Publication__Publication_fromISAJsonString_Static_Z721C83C5(s: str) -> Publication:
59
+ match_value: FSharpResult_2[Publication, str] = Decode_fromString(ISAJson_decoder, s)
60
+ if match_value.tag == 1:
61
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
62
+
63
+ else:
64
+ return match_value.fields[0]
65
+
66
+
67
+
68
+ def ARCtrl_Publication__Publication_toISAJsonString_Static_Z3B036AA(spaces: int | None=None, use_idreferencing: bool | None=None) -> Callable[[Publication], str]:
69
+ id_map: Any | None = dict([]) if default_arg(use_idreferencing, False) else None
70
+ def _arrow3506(obj: Publication, spaces: Any=spaces, use_idreferencing: Any=use_idreferencing) -> str:
71
+ value: IEncodable = ISAJson_encoder(id_map, obj)
72
+ return to_string(default_spaces(spaces), value)
73
+
74
+ return _arrow3506
75
+
76
+
77
+ def ARCtrl_Publication__Publication_ToISAJsonString_Z3B036AA(this: Publication, spaces: int | None=None, use_idreferencing: bool | None=None) -> str:
78
+ return ARCtrl_Publication__Publication_toISAJsonString_Static_Z3B036AA(spaces, use_idreferencing)(this)
79
+
80
+
81
+ __all__ = ["ARCtrl_Publication__Publication_fromJsonString_Static_Z721C83C5", "ARCtrl_Publication__Publication_toJsonString_Static_71136F3F", "ARCtrl_Publication__Publication_ToJsonString_71136F3F", "ARCtrl_Publication__Publication_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_Publication__Publication_toROCrateJsonString_Static_71136F3F", "ARCtrl_Publication__Publication_ToROCrateJsonString_71136F3F", "ARCtrl_Publication__Publication_fromISAJsonString_Static_Z721C83C5", "ARCtrl_Publication__Publication_toISAJsonString_Static_Z3B036AA", "ARCtrl_Publication__Publication_ToISAJsonString_Z3B036AA"]
82
+
@@ -0,0 +1,114 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import Any
4
+ from ..Core.arc_types import (ArcStudy, ArcAssay)
5
+ from ..Core.ontology_annotation import OntologyAnnotation
6
+ from ..Core.Table.composite_cell import CompositeCell
7
+ from ..Json.encode import default_spaces
8
+ from ..Json.study import (decoder as decoder_1, encoder, decoder_compressed, encoder_compressed, ROCrate_decoder, ROCrate_encoder, ISAJson_decoder, ISAJson_encoder)
9
+ from ..fable_modules.fable_library.list import FSharpList
10
+ from ..fable_modules.fable_library.option import default_arg
11
+ from ..fable_modules.fable_library.result import FSharpResult_2
12
+ from ..fable_modules.fable_library.string_ import (to_text, printf, to_fail)
13
+ from ..fable_modules.fable_library.types import Array
14
+ from ..fable_modules.thoth_json_core.types import (IEncodable, Decoder_1)
15
+ from ..fable_modules.thoth_json_python.decode import Decode_fromString
16
+ from ..fable_modules.thoth_json_python.encode import to_string
17
+ from .Table.compression import (decode, encode)
18
+
19
+ def ARCtrl_ArcStudy__ArcStudy_fromJsonString_Static_Z721C83C5(s: str) -> ArcStudy:
20
+ match_value: FSharpResult_2[ArcStudy, str] = Decode_fromString(decoder_1, s)
21
+ if match_value.tag == 1:
22
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
23
+
24
+ else:
25
+ return match_value.fields[0]
26
+
27
+
28
+
29
+ def ARCtrl_ArcStudy__ArcStudy_toJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[ArcStudy], str]:
30
+ def _arrow3566(obj: ArcStudy, spaces: Any=spaces) -> str:
31
+ value: IEncodable = encoder(obj)
32
+ return to_string(default_spaces(spaces), value)
33
+
34
+ return _arrow3566
35
+
36
+
37
+ def ARCtrl_ArcStudy__ArcStudy_ToJsonString_71136F3F(this: ArcStudy, spaces: int | None=None) -> str:
38
+ return ARCtrl_ArcStudy__ArcStudy_toJsonString_Static_71136F3F(spaces)(this)
39
+
40
+
41
+ def ARCtrl_ArcStudy__ArcStudy_fromCompressedJsonString_Static_Z721C83C5(s: str) -> ArcStudy:
42
+ try:
43
+ match_value: FSharpResult_2[ArcStudy, str] = Decode_fromString(decode(decoder_compressed), s)
44
+ if match_value.tag == 1:
45
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
46
+
47
+ else:
48
+ return match_value.fields[0]
49
+
50
+
51
+ except Exception as e_1:
52
+ arg_1: str = str(e_1)
53
+ return to_fail(printf("Error. Unable to parse json string to ArcStudy: %s"))(arg_1)
54
+
55
+
56
+
57
+ def ARCtrl_ArcStudy__ArcStudy_toCompressedJsonString_Static_71136F3F(spaces: int | None=None) -> Callable[[ArcStudy], str]:
58
+ def _arrow3567(obj: ArcStudy, spaces: Any=spaces) -> str:
59
+ return to_string(default_arg(spaces, 0), encode(encoder_compressed, obj))
60
+
61
+ return _arrow3567
62
+
63
+
64
+ def ARCtrl_ArcStudy__ArcStudy_ToCompressedJsonString_71136F3F(this: ArcStudy, spaces: int | None=None) -> str:
65
+ return ARCtrl_ArcStudy__ArcStudy_toCompressedJsonString_Static_71136F3F(spaces)(this)
66
+
67
+
68
+ def ARCtrl_ArcStudy__ArcStudy_fromROCrateJsonString_Static_Z721C83C5(s: str) -> tuple[ArcStudy, FSharpList[ArcAssay]]:
69
+ match_value: FSharpResult_2[tuple[ArcStudy, FSharpList[ArcAssay]], str] = Decode_fromString(ROCrate_decoder, s)
70
+ if match_value.tag == 1:
71
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
72
+
73
+ else:
74
+ return match_value.fields[0]
75
+
76
+
77
+
78
+ def ARCtrl_ArcStudy__ArcStudy_toROCrateJsonString_Static_3BA23086(assays: FSharpList[ArcAssay] | None=None, spaces: int | None=None) -> Callable[[ArcStudy], str]:
79
+ def _arrow3568(obj: ArcStudy, assays: Any=assays, spaces: Any=spaces) -> str:
80
+ value: IEncodable = ROCrate_encoder(assays, obj)
81
+ return to_string(default_spaces(spaces), value)
82
+
83
+ return _arrow3568
84
+
85
+
86
+ def ARCtrl_ArcStudy__ArcStudy_ToROCrateJsonString_3BA23086(this: ArcStudy, assays: FSharpList[ArcAssay] | None=None, spaces: int | None=None) -> str:
87
+ return ARCtrl_ArcStudy__ArcStudy_toROCrateJsonString_Static_3BA23086(assays, spaces)(this)
88
+
89
+
90
+ def ARCtrl_ArcStudy__ArcStudy_fromISAJsonString_Static_Z721C83C5(s: str) -> tuple[ArcStudy, FSharpList[ArcAssay]]:
91
+ match_value: FSharpResult_2[tuple[ArcStudy, FSharpList[ArcAssay]], str] = Decode_fromString(ISAJson_decoder, s)
92
+ if match_value.tag == 1:
93
+ raise Exception(to_text(printf("Error decoding string: %O"))(match_value.fields[0]))
94
+
95
+ else:
96
+ return match_value.fields[0]
97
+
98
+
99
+
100
+ def ARCtrl_ArcStudy__ArcStudy_toISAJsonString_Static_Z3FD920F1(assays: FSharpList[ArcAssay] | None=None, spaces: int | None=None, use_idreferencing: bool | None=None) -> Callable[[ArcStudy], str]:
101
+ id_map: Any | None = dict([]) if default_arg(use_idreferencing, False) else None
102
+ def _arrow3569(obj: ArcStudy, assays: Any=assays, spaces: Any=spaces, use_idreferencing: Any=use_idreferencing) -> str:
103
+ value: IEncodable = ISAJson_encoder(id_map, assays, obj)
104
+ return to_string(default_spaces(spaces), value)
105
+
106
+ return _arrow3569
107
+
108
+
109
+ def ARCtrl_ArcStudy__ArcStudy_ToISAJsonString_Z3FD920F1(this: ArcStudy, assays: FSharpList[ArcAssay] | None=None, spaces: int | None=None, use_idreferencing: bool | None=None) -> str:
110
+ return ARCtrl_ArcStudy__ArcStudy_toISAJsonString_Static_Z3FD920F1(assays, spaces, use_idreferencing)(this)
111
+
112
+
113
+ __all__ = ["ARCtrl_ArcStudy__ArcStudy_fromJsonString_Static_Z721C83C5", "ARCtrl_ArcStudy__ArcStudy_toJsonString_Static_71136F3F", "ARCtrl_ArcStudy__ArcStudy_ToJsonString_71136F3F", "ARCtrl_ArcStudy__ArcStudy_fromCompressedJsonString_Static_Z721C83C5", "ARCtrl_ArcStudy__ArcStudy_toCompressedJsonString_Static_71136F3F", "ARCtrl_ArcStudy__ArcStudy_ToCompressedJsonString_71136F3F", "ARCtrl_ArcStudy__ArcStudy_fromROCrateJsonString_Static_Z721C83C5", "ARCtrl_ArcStudy__ArcStudy_toROCrateJsonString_Static_3BA23086", "ARCtrl_ArcStudy__ArcStudy_ToROCrateJsonString_3BA23086", "ARCtrl_ArcStudy__ArcStudy_fromISAJsonString_Static_Z721C83C5", "ARCtrl_ArcStudy__ArcStudy_toISAJsonString_Static_Z3FD920F1", "ARCtrl_ArcStudy__ArcStudy_ToISAJsonString_Z3FD920F1"]
114
+
File without changes