arctrl 3.0.0a3__py3-none-any.whl

arctrl/py/Json/context/rocrate/isa_person_context.py

@@ -0,0 +1,131 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1748() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Person.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Person", string_type), ("first_name", string_type), ("last_name", string_type), ("mid_initials", string_type), ("email", string_type), ("address", string_type), ("phone", string_type), ("fax", string_type), ("comments", string_type), ("roles", string_type), ("affiliation", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Person: str
+    first_name: str
+    last_name: str
+    mid_initials: str
+    email: str
+    address: str
+    phone: str
+    fax: str
+    comments: str
+    roles: str
+    affiliation: str
+
+IContext_reflection = _expr1748
+
+def _arrow1763(__unit: None=None) -> IEncodable:
+    class ObjectExpr1749(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1750(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:Person")
+
+    class ObjectExpr1751(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:identifier")
+
+    class ObjectExpr1752(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:givenName")
+
+    class ObjectExpr1753(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("sdo:familyName")
+
+    class ObjectExpr1754(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:additionalName")
+
+    class ObjectExpr1755(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:email")
+
+    class ObjectExpr1756(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:address")
+
+    class ObjectExpr1757(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("sdo:telephone")
+
+    class ObjectExpr1758(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_9.encode_string("sdo:faxNumber")
+
+    class ObjectExpr1759(IEncodable):
+        def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_10.encode_string("sdo:disambiguatingDescription")
+
+    class ObjectExpr1760(IEncodable):
+        def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_11.encode_string("sdo:jobTitle")
+
+    class ObjectExpr1761(IEncodable):
+        def Encode(self, helpers_12: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_12.encode_string("sdo:affiliation")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1749()), ("Person", ObjectExpr1750()), ("orcid", ObjectExpr1751()), ("firstName", ObjectExpr1752()), ("lastName", ObjectExpr1753()), ("midInitials", ObjectExpr1754()), ("email", ObjectExpr1755()), ("address", ObjectExpr1756()), ("phone", ObjectExpr1757()), ("fax", ObjectExpr1758()), ("comments", ObjectExpr1759()), ("roles", ObjectExpr1760()), ("affiliation", ObjectExpr1761())])
+    class ObjectExpr1762(IEncodable):
+        def Encode(self, helpers_13: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_13))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_13.encode_object(arg)
+
+    return ObjectExpr1762()
+
+
+context_jsonvalue: IEncodable = _arrow1763()
+
+def _arrow1768(__unit: None=None) -> IEncodable:
+    class ObjectExpr1764(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1765(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:Person")
+
+    class ObjectExpr1766(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:name")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1764()), ("Person", ObjectExpr1765()), ("name", ObjectExpr1766())])
+    class ObjectExpr1767(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_3))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_3.encode_object(arg)
+
+    return ObjectExpr1767()
+
+
+context_minimal_json_value: IEncodable = _arrow1768()
+
+context_str: str = "\r\n{\r\n  \"@context\": {\r\n    \"sdo\": \"http://schema.org/\",\r\n    \"arc\": \"http://purl.org/nfdi4plants/ontology/\",\r\n\r\n    \"Person\": \"sdo:Person\",\r\n    \"firstName\": \"sdo:givenName\",\r\n    \"lastName\": \"sdo:familyName\",\r\n    \"midInitials\": \"sdo:additionalName\",\r\n    \"email\": \"sdo:email\",\r\n    \"address\": \"sdo:address\",\r\n    \"phone\": \"sdo:telephone\",\r\n    \"fax\": \"sdo:faxNumber\",\r\n    \"comments\": \"sdo:disambiguatingDescription\",\r\n    \"roles\": \"sdo:jobTitle\",\r\n    \"affiliation\": \"sdo:affiliation\"\r\n  }\r\n}\r\n    "
+
+__all__ = ["IContext_reflection", "context_jsonvalue", "context_minimal_json_value", "context_str"]
+

arctrl/py/Json/context/rocrate/isa_process_context.py

@@ -0,0 +1,94 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1769() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Process.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Process", string_type), ("ArcProcess", string_type), ("name", string_type), ("executes_protocol", string_type), ("performer", string_type), ("date", string_type), ("previous_process", string_type), ("next_process", string_type), ("input", string_type), ("output", string_type), ("comments", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Process: str
+    ArcProcess: str
+    name: str
+    executes_protocol: str
+    performer: str
+    date: str
+    previous_process: str
+    next_process: str
+    input: str
+    output: str
+    comments: str
+
+IContext_reflection = _expr1769
+
+def _arrow1782(__unit: None=None) -> IEncodable:
+    class ObjectExpr1770(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1771(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("https://bioschemas.org/")
+
+    class ObjectExpr1772(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("bio:LabProcess")
+
+    class ObjectExpr1773(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr1774(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("bio:executesLabProtocol")
+
+    class ObjectExpr1775(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("bio:parameterValue")
+
+    class ObjectExpr1776(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:agent")
+
+    class ObjectExpr1777(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:endTime")
+
+    class ObjectExpr1778(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("sdo:object")
+
+    class ObjectExpr1779(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_9.encode_string("sdo:result")
+
+    class ObjectExpr1780(IEncodable):
+        def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_10.encode_string("sdo:disambiguatingDescription")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1770()), ("bio", ObjectExpr1771()), ("Process", ObjectExpr1772()), ("name", ObjectExpr1773()), ("executesProtocol", ObjectExpr1774()), ("parameterValues", ObjectExpr1775()), ("performer", ObjectExpr1776()), ("date", ObjectExpr1777()), ("inputs", ObjectExpr1778()), ("outputs", ObjectExpr1779()), ("comments", ObjectExpr1780())])
+    class ObjectExpr1781(IEncodable):
+        def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_11))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_11.encode_object(arg)
+
+    return ObjectExpr1781()
+
+
+context_jsonvalue: IEncodable = _arrow1782()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_process_parameter_value_context.py

@@ -0,0 +1,80 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1783() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.ProcessParameterValue.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("ProcessParameterValue", string_type), ("ArcProcessParameterValue", string_type), ("category", string_type), ("value", string_type), ("unit", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    ProcessParameterValue: str
+    ArcProcessParameterValue: str
+    category: str
+    value: str
+    unit: str
+
+IContext_reflection = _expr1783
+
+def _arrow1794(__unit: None=None) -> IEncodable:
+    class ObjectExpr1784(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1785(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:additionalType")
+
+    class ObjectExpr1786(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:PropertyValue")
+
+    class ObjectExpr1787(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr1788(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("sdo:propertyID")
+
+    class ObjectExpr1789(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:value")
+
+    class ObjectExpr1790(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:valueReference")
+
+    class ObjectExpr1791(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:unitText")
+
+    class ObjectExpr1792(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("sdo:unitCode")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1784()), ("additionalType", ObjectExpr1785()), ("ProcessParameterValue", ObjectExpr1786()), ("category", ObjectExpr1787()), ("categoryCode", ObjectExpr1788()), ("value", ObjectExpr1789()), ("valueCode", ObjectExpr1790()), ("unit", ObjectExpr1791()), ("unitCode", ObjectExpr1792())])
+    class ObjectExpr1793(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_9))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_9.encode_object(arg)
+
+    return ObjectExpr1793()
+
+
+context_jsonvalue: IEncodable = _arrow1794()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_protocol_context.py

@@ -0,0 +1,97 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1795() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Protocol.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Protocol", string_type), ("ArcProtocol", string_type), ("name", string_type), ("protocol_type", string_type), ("description", string_type), ("version", string_type), ("components", string_type), ("parameters", string_type), ("uri", string_type), ("comments", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Protocol: str
+    ArcProtocol: str
+    name: str
+    protocol_type: str
+    description: str
+    version: str
+    components: str
+    parameters: str
+    uri: str
+    comments: str
+
+IContext_reflection = _expr1795
+
+def _arrow1813(__unit: None=None) -> IEncodable:
+    class ObjectExpr1796(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1797(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("https://bioschemas.org/")
+
+    class ObjectExpr1798(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("bio:LabProtocol")
+
+    class ObjectExpr1799(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr1800(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("bio:intendedUse")
+
+    class ObjectExpr1801(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:description")
+
+    class ObjectExpr1802(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:version")
+
+    class ObjectExpr1804(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("bio:labEquipment")
+
+    class ObjectExpr1805(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("bio:reagent")
+
+    class ObjectExpr1806(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_9.encode_string("bio:computationalTool")
+
+    class ObjectExpr1807(IEncodable):
+        def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_10.encode_string("sdo:url")
+
+    class ObjectExpr1809(IEncodable):
+        def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_11.encode_string("sdo:comment")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1796()), ("bio", ObjectExpr1797()), ("Protocol", ObjectExpr1798()), ("name", ObjectExpr1799()), ("protocolType", ObjectExpr1800()), ("description", ObjectExpr1801()), ("version", ObjectExpr1802()), ("components", ObjectExpr1804()), ("reagents", ObjectExpr1805()), ("computationalTools", ObjectExpr1806()), ("uri", ObjectExpr1807()), ("comments", ObjectExpr1809())])
+    class ObjectExpr1812(IEncodable):
+        def Encode(self, helpers_12: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_12))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_12.encode_object(arg)
+
+    return ObjectExpr1812()
+
+
+context_jsonvalue: IEncodable = _arrow1813()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_protocol_parameter_context.py

@@ -0,0 +1,64 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1803() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.ProtocolParameter.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("ProtocolParamter", string_type), ("ArcProtocolParameter", string_type), ("parameter_name", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    ProtocolParamter: str
+    ArcProtocolParameter: str
+    parameter_name: str
+
+IContext_reflection = _expr1803
+
+def _arrow1817(__unit: None=None) -> IEncodable:
+    class ObjectExpr1808(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1810(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("http://purl.org/nfdi4plants/ontology/")
+
+    class ObjectExpr1811(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:Thing")
+
+    class ObjectExpr1814(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("arc:ARC#ARC_00000063")
+
+    class ObjectExpr1815(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("arc:ARC#ARC_00000100")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1808()), ("arc", ObjectExpr1810()), ("ProtocolParameter", ObjectExpr1811()), ("ArcProtocolParameter", ObjectExpr1814()), ("parameterName", ObjectExpr1815())])
+    class ObjectExpr1816(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_5))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_5.encode_object(arg)
+
+    return ObjectExpr1816()
+
+
+context_jsonvalue: IEncodable = _arrow1817()
+
+context_str: str = "\r\n{\r\n  \"@context\": {\r\n    \"sdo\": \"http://schema.org/\",\r\n    \"arc\": \"http://purl.org/nfdi4plants/ontology/\",\r\n\r\n    \"ProtocolParameter\": \"sdo:Thing\",\r\n    \"ArcProtocolParameter\": \"arc:ARC#ARC_00000063\",\r\n\r\n    \"parameterName\": \"arc:ARC#ARC_00000100\"\r\n  }\r\n}\r\n    "
+
+__all__ = ["IContext_reflection", "context_jsonvalue", "context_str"]
+

arctrl/py/Json/context/rocrate/isa_publication_context.py

@@ -0,0 +1,78 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1818() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Publication.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Publication", string_type), ("pub_med_id", string_type), ("doi", string_type), ("title", string_type), ("status", string_type), ("author_list", string_type), ("comments", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Publication: str
+    pub_med_id: str
+    doi: str
+    title: str
+    status: str
+    author_list: str
+    comments: str
+
+IContext_reflection = _expr1818
+
+def _arrow1829(__unit: None=None) -> IEncodable:
+    class ObjectExpr1819(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1820(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:ScholarlyArticle")
+
+    class ObjectExpr1821(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:url")
+
+    class ObjectExpr1822(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:sameAs")
+
+    class ObjectExpr1823(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("sdo:headline")
+
+    class ObjectExpr1824(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:creativeWorkStatus")
+
+    class ObjectExpr1825(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:author")
+
+    class ObjectExpr1826(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:disambiguatingDescription")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1819()), ("Publication", ObjectExpr1820()), ("pubMedID", ObjectExpr1821()), ("doi", ObjectExpr1822()), ("title", ObjectExpr1823()), ("status", ObjectExpr1824()), ("authorList", ObjectExpr1825()), ("comments", ObjectExpr1826())])
+    class ObjectExpr1828(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_8))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_8.encode_object(arg)
+
+    return ObjectExpr1828()
+
+
+context_jsonvalue: IEncodable = _arrow1829()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_sample_context.py

@@ -0,0 +1,65 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr1827() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Sample.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Sample", string_type), ("ArcSample", string_type), ("name", string_type), ("characteristics", string_type), ("factor_values", string_type), ("derives_from", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Sample: str
+    ArcSample: str
+    name: str
+    characteristics: str
+    factor_values: str
+    derives_from: str
+
+IContext_reflection = _expr1827
+
+def _arrow1836(__unit: None=None) -> IEncodable:
+    class ObjectExpr1830(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr1831(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("https://bioschemas.org/")
+
+    class ObjectExpr1832(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("bio:Sample")
+
+    class ObjectExpr1833(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr1834(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("bio:additionalProperty")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1830()), ("bio", ObjectExpr1831()), ("Sample", ObjectExpr1832()), ("name", ObjectExpr1833()), ("additionalProperties", ObjectExpr1834())])
+    class ObjectExpr1835(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_5))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_5.encode_object(arg)
+
+    return ObjectExpr1835()
+
+
+context_jsonvalue: IEncodable = _arrow1836()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+