arctrl 3.0.0a3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (456) hide show
  1. arctrl/__init__.py +18 -0
  2. arctrl/py/CWL/__init__.py +0 -0
  3. arctrl/py/CWL/cwltypes.py +150 -0
  4. arctrl/py/CWL/decode.py +973 -0
  5. arctrl/py/CWL/encode.py +1 -0
  6. arctrl/py/CWL/inputs.py +88 -0
  7. arctrl/py/CWL/outputs.py +85 -0
  8. arctrl/py/CWL/requirements.py +77 -0
  9. arctrl/py/CWL/tool_description.py +103 -0
  10. arctrl/py/CWL/workflow_description.py +104 -0
  11. arctrl/py/CWL/workflow_steps.py +113 -0
  12. arctrl/py/Contract/__init__.py +0 -0
  13. arctrl/py/Contract/arc.py +60 -0
  14. arctrl/py/Contract/arc_assay.py +125 -0
  15. arctrl/py/Contract/arc_investigation.py +88 -0
  16. arctrl/py/Contract/arc_run.py +125 -0
  17. arctrl/py/Contract/arc_study.py +126 -0
  18. arctrl/py/Contract/arc_workflow.py +125 -0
  19. arctrl/py/Contract/contract.py +153 -0
  20. arctrl/py/Contract/datamap.py +372 -0
  21. arctrl/py/Contract/git.py +118 -0
  22. arctrl/py/Contract/validation_packages_config.py +107 -0
  23. arctrl/py/ContractIO/__init__.py +0 -0
  24. arctrl/py/ContractIO/contract_io.py +344 -0
  25. arctrl/py/ContractIO/file_system_helper.py +264 -0
  26. arctrl/py/Core/Helper/__init__.py +0 -0
  27. arctrl/py/Core/Helper/collections_.py +438 -0
  28. arctrl/py/Core/Helper/date_time.py +26 -0
  29. arctrl/py/Core/Helper/hash_codes.py +60 -0
  30. arctrl/py/Core/Helper/identifier.py +248 -0
  31. arctrl/py/Core/Helper/orcid.py +42 -0
  32. arctrl/py/Core/Helper/printer.py +13 -0
  33. arctrl/py/Core/Helper/regex.py +554 -0
  34. arctrl/py/Core/Helper/sem_ver.py +71 -0
  35. arctrl/py/Core/Helper/url.py +148 -0
  36. arctrl/py/Core/Process/__init__.py +0 -0
  37. arctrl/py/Core/Process/column_index.py +280 -0
  38. arctrl/py/Core/Process/component.py +200 -0
  39. arctrl/py/Core/Process/factor.py +151 -0
  40. arctrl/py/Core/Process/factor_value.py +182 -0
  41. arctrl/py/Core/Process/material.py +74 -0
  42. arctrl/py/Core/Process/material_attribute.py +95 -0
  43. arctrl/py/Core/Process/material_attribute_value.py +184 -0
  44. arctrl/py/Core/Process/material_type.py +45 -0
  45. arctrl/py/Core/Process/process.py +477 -0
  46. arctrl/py/Core/Process/process_input.py +265 -0
  47. arctrl/py/Core/Process/process_output.py +235 -0
  48. arctrl/py/Core/Process/process_parameter_value.py +200 -0
  49. arctrl/py/Core/Process/process_sequence.py +435 -0
  50. arctrl/py/Core/Process/protocol.py +175 -0
  51. arctrl/py/Core/Process/protocol_parameter.py +98 -0
  52. arctrl/py/Core/Process/sample.py +82 -0
  53. arctrl/py/Core/Process/source.py +62 -0
  54. arctrl/py/Core/Table/__init__.py +0 -0
  55. arctrl/py/Core/Table/arc_table.py +1264 -0
  56. arctrl/py/Core/Table/arc_table_aux.py +575 -0
  57. arctrl/py/Core/Table/arc_tables.py +591 -0
  58. arctrl/py/Core/Table/composite_cell.py +319 -0
  59. arctrl/py/Core/Table/composite_column.py +73 -0
  60. arctrl/py/Core/Table/composite_header.py +739 -0
  61. arctrl/py/Core/__init__.py +0 -0
  62. arctrl/py/Core/arc_types.py +5064 -0
  63. arctrl/py/Core/comment.py +128 -0
  64. arctrl/py/Core/comment_list.py +127 -0
  65. arctrl/py/Core/conversion.py +1313 -0
  66. arctrl/py/Core/data.py +245 -0
  67. arctrl/py/Core/data_context.py +157 -0
  68. arctrl/py/Core/data_file.py +112 -0
  69. arctrl/py/Core/data_map.py +225 -0
  70. arctrl/py/Core/identifier_setters.py +31 -0
  71. arctrl/py/Core/iproperty_value.py +36 -0
  72. arctrl/py/Core/ontology_annotation.py +299 -0
  73. arctrl/py/Core/ontology_source_reference.py +114 -0
  74. arctrl/py/Core/person.py +259 -0
  75. arctrl/py/Core/publication.py +161 -0
  76. arctrl/py/Core/template.py +231 -0
  77. arctrl/py/Core/templates.py +148 -0
  78. arctrl/py/Core/uri.py +11 -0
  79. arctrl/py/Core/value.py +188 -0
  80. arctrl/py/FileSystem/__init__.py +0 -0
  81. arctrl/py/FileSystem/commit.py +21 -0
  82. arctrl/py/FileSystem/default_gitattributes.py +5 -0
  83. arctrl/py/FileSystem/default_gitignore.py +5 -0
  84. arctrl/py/FileSystem/file_system.py +58 -0
  85. arctrl/py/FileSystem/file_system_tree.py +426 -0
  86. arctrl/py/FileSystem/path.py +64 -0
  87. arctrl/py/Json/DataMap/__init__.py +0 -0
  88. arctrl/py/Json/DataMap/data_context.py +101 -0
  89. arctrl/py/Json/DataMap/data_map.py +53 -0
  90. arctrl/py/Json/Process/__init__.py +0 -0
  91. arctrl/py/Json/Process/assay_materials.py +46 -0
  92. arctrl/py/Json/Process/component.py +79 -0
  93. arctrl/py/Json/Process/factor.py +107 -0
  94. arctrl/py/Json/Process/factor_value.py +101 -0
  95. arctrl/py/Json/Process/material.py +226 -0
  96. arctrl/py/Json/Process/material_attribute.py +79 -0
  97. arctrl/py/Json/Process/material_attribute_value.py +101 -0
  98. arctrl/py/Json/Process/material_type.py +53 -0
  99. arctrl/py/Json/Process/process.py +296 -0
  100. arctrl/py/Json/Process/process_input.py +83 -0
  101. arctrl/py/Json/Process/process_output.py +67 -0
  102. arctrl/py/Json/Process/process_parameter_value.py +81 -0
  103. arctrl/py/Json/Process/protocol.py +354 -0
  104. arctrl/py/Json/Process/protocol_parameter.py +79 -0
  105. arctrl/py/Json/Process/sample.py +277 -0
  106. arctrl/py/Json/Process/source.py +214 -0
  107. arctrl/py/Json/Process/study_materials.py +52 -0
  108. arctrl/py/Json/Process/value.py +56 -0
  109. arctrl/py/Json/ROCrate/__init__.py +0 -0
  110. arctrl/py/Json/ROCrate/ldcontext.py +133 -0
  111. arctrl/py/Json/ROCrate/ldgraph.py +111 -0
  112. arctrl/py/Json/ROCrate/ldnode.py +290 -0
  113. arctrl/py/Json/ROCrate/ldref.py +44 -0
  114. arctrl/py/Json/ROCrate/ldvalue.py +102 -0
  115. arctrl/py/Json/Table/__init__.py +0 -0
  116. arctrl/py/Json/Table/arc_table.py +393 -0
  117. arctrl/py/Json/Table/cell_table.py +83 -0
  118. arctrl/py/Json/Table/composite_cell.py +136 -0
  119. arctrl/py/Json/Table/composite_header.py +67 -0
  120. arctrl/py/Json/Table/iotype.py +24 -0
  121. arctrl/py/Json/Table/oatable.py +82 -0
  122. arctrl/py/Json/Table/templates.py +281 -0
  123. arctrl/py/Json/__init__.py +0 -0
  124. arctrl/py/Json/assay.py +600 -0
  125. arctrl/py/Json/comment.py +206 -0
  126. arctrl/py/Json/context/rocrate/__init__.py +0 -0
  127. arctrl/py/Json/context/rocrate/isa_assay_context.py +101 -0
  128. arctrl/py/Json/context/rocrate/isa_comment_context.py +60 -0
  129. arctrl/py/Json/context/rocrate/isa_component_context.py +77 -0
  130. arctrl/py/Json/context/rocrate/isa_data_context.py +74 -0
  131. arctrl/py/Json/context/rocrate/isa_factor_context.py +74 -0
  132. arctrl/py/Json/context/rocrate/isa_factor_value_context.py +84 -0
  133. arctrl/py/Json/context/rocrate/isa_investigation_context.py +110 -0
  134. arctrl/py/Json/context/rocrate/isa_material_attribute_context.py +64 -0
  135. arctrl/py/Json/context/rocrate/isa_material_attribute_value_context.py +80 -0
  136. arctrl/py/Json/context/rocrate/isa_material_context.py +71 -0
  137. arctrl/py/Json/context/rocrate/isa_ontology_annotation_context.py +68 -0
  138. arctrl/py/Json/context/rocrate/isa_ontology_source_reference_context.py +75 -0
  139. arctrl/py/Json/context/rocrate/isa_organization_context.py +55 -0
  140. arctrl/py/Json/context/rocrate/isa_person_context.py +131 -0
  141. arctrl/py/Json/context/rocrate/isa_process_context.py +94 -0
  142. arctrl/py/Json/context/rocrate/isa_process_parameter_value_context.py +80 -0
  143. arctrl/py/Json/context/rocrate/isa_protocol_context.py +97 -0
  144. arctrl/py/Json/context/rocrate/isa_protocol_parameter_context.py +64 -0
  145. arctrl/py/Json/context/rocrate/isa_publication_context.py +78 -0
  146. arctrl/py/Json/context/rocrate/isa_sample_context.py +65 -0
  147. arctrl/py/Json/context/rocrate/isa_source_context.py +66 -0
  148. arctrl/py/Json/context/rocrate/isa_study_context.py +125 -0
  149. arctrl/py/Json/context/rocrate/property_value_context.py +73 -0
  150. arctrl/py/Json/context/rocrate/rocrate_context.py +81 -0
  151. arctrl/py/Json/converter_options.py +23 -0
  152. arctrl/py/Json/data.py +356 -0
  153. arctrl/py/Json/data_file.py +63 -0
  154. arctrl/py/Json/decode.py +155 -0
  155. arctrl/py/Json/encode.py +92 -0
  156. arctrl/py/Json/idtable.py +44 -0
  157. arctrl/py/Json/investigation.py +695 -0
  158. arctrl/py/Json/ontology_annotation.py +404 -0
  159. arctrl/py/Json/ontology_source_reference.py +255 -0
  160. arctrl/py/Json/person.py +658 -0
  161. arctrl/py/Json/property_value.py +359 -0
  162. arctrl/py/Json/publication.py +279 -0
  163. arctrl/py/Json/string_table.py +76 -0
  164. arctrl/py/Json/study.py +793 -0
  165. arctrl/py/JsonIO/DataMap/__init__.py +0 -0
  166. arctrl/py/JsonIO/DataMap/data_map.py +53 -0
  167. arctrl/py/JsonIO/Process/__init__.py +0 -0
  168. arctrl/py/JsonIO/Process/component.py +60 -0
  169. arctrl/py/JsonIO/Process/factor.py +36 -0
  170. arctrl/py/JsonIO/Process/factor_value.py +38 -0
  171. arctrl/py/JsonIO/Process/material.py +60 -0
  172. arctrl/py/JsonIO/Process/material_attribute.py +38 -0
  173. arctrl/py/JsonIO/Process/material_attribute_value.py +60 -0
  174. arctrl/py/JsonIO/Process/material_type.py +36 -0
  175. arctrl/py/JsonIO/Process/process.py +60 -0
  176. arctrl/py/JsonIO/Process/process_input.py +38 -0
  177. arctrl/py/JsonIO/Process/process_output.py +60 -0
  178. arctrl/py/JsonIO/Process/process_parameter_value.py +60 -0
  179. arctrl/py/JsonIO/Process/process_sequence.py +71 -0
  180. arctrl/py/JsonIO/Process/protocol.py +60 -0
  181. arctrl/py/JsonIO/Process/protocol_parameter.py +36 -0
  182. arctrl/py/JsonIO/Process/sample.py +60 -0
  183. arctrl/py/JsonIO/Process/source.py +60 -0
  184. arctrl/py/JsonIO/Process/study_materials.py +52 -0
  185. arctrl/py/JsonIO/Process/value.py +32 -0
  186. arctrl/py/JsonIO/Table/__init__.py +0 -0
  187. arctrl/py/JsonIO/Table/arc_table.py +121 -0
  188. arctrl/py/JsonIO/Table/composite_cell.py +36 -0
  189. arctrl/py/JsonIO/Table/composite_header.py +36 -0
  190. arctrl/py/JsonIO/Table/compression.py +85 -0
  191. arctrl/py/JsonIO/Table/iotype.py +36 -0
  192. arctrl/py/JsonIO/Table/templates.py +113 -0
  193. arctrl/py/JsonIO/__init__.py +0 -0
  194. arctrl/py/JsonIO/assay.py +113 -0
  195. arctrl/py/JsonIO/comment.py +80 -0
  196. arctrl/py/JsonIO/data.py +60 -0
  197. arctrl/py/JsonIO/data_file.py +58 -0
  198. arctrl/py/JsonIO/decode.py +9 -0
  199. arctrl/py/JsonIO/encode.py +1 -0
  200. arctrl/py/JsonIO/investigation.py +113 -0
  201. arctrl/py/JsonIO/ldobject.py +106 -0
  202. arctrl/py/JsonIO/ontology_annotation.py +80 -0
  203. arctrl/py/JsonIO/ontology_source_reference.py +80 -0
  204. arctrl/py/JsonIO/person.py +82 -0
  205. arctrl/py/JsonIO/publication.py +82 -0
  206. arctrl/py/JsonIO/study.py +114 -0
  207. arctrl/py/ROCrate/Generic/__init__.py +0 -0
  208. arctrl/py/ROCrate/Generic/comment.py +131 -0
  209. arctrl/py/ROCrate/Generic/dataset.py +817 -0
  210. arctrl/py/ROCrate/Generic/defined_term.py +131 -0
  211. arctrl/py/ROCrate/Generic/file.py +237 -0
  212. arctrl/py/ROCrate/Generic/lab_process.py +324 -0
  213. arctrl/py/ROCrate/Generic/lab_protocol.py +338 -0
  214. arctrl/py/ROCrate/Generic/organization.py +83 -0
  215. arctrl/py/ROCrate/Generic/person.py +484 -0
  216. arctrl/py/ROCrate/Generic/postal_address.py +195 -0
  217. arctrl/py/ROCrate/Generic/property_value.py +696 -0
  218. arctrl/py/ROCrate/Generic/sample.py +202 -0
  219. arctrl/py/ROCrate/Generic/scholarly_article.py +229 -0
  220. arctrl/py/ROCrate/ISAProfile/__init__.py +0 -0
  221. arctrl/py/ROCrate/ISAProfile/assay.py +70 -0
  222. arctrl/py/ROCrate/ISAProfile/data.py +65 -0
  223. arctrl/py/ROCrate/ISAProfile/dataset.py +24 -0
  224. arctrl/py/ROCrate/ISAProfile/investigation.py +73 -0
  225. arctrl/py/ROCrate/ISAProfile/lab_process.py +162 -0
  226. arctrl/py/ROCrate/ISAProfile/lab_protocol.py +37 -0
  227. arctrl/py/ROCrate/ISAProfile/person.py +72 -0
  228. arctrl/py/ROCrate/ISAProfile/property_value.py +98 -0
  229. arctrl/py/ROCrate/ISAProfile/sample.py +64 -0
  230. arctrl/py/ROCrate/ISAProfile/scholarly_article.py +98 -0
  231. arctrl/py/ROCrate/ISAProfile/study.py +74 -0
  232. arctrl/py/ROCrate/__init__.py +0 -0
  233. arctrl/py/ROCrate/arc_rocrate_metadata.py +39 -0
  234. arctrl/py/ROCrate/dyn_obj_extensions.py +1 -0
  235. arctrl/py/ROCrate/helper.py +8 -0
  236. arctrl/py/ROCrate/ldcontext.py +362 -0
  237. arctrl/py/ROCrate/ldobject.py +1247 -0
  238. arctrl/py/ROCrate/rocrate_context.py +51 -0
  239. arctrl/py/Spreadsheet/AnnotationTable/__init__.py +0 -0
  240. arctrl/py/Spreadsheet/AnnotationTable/arc_table.py +193 -0
  241. arctrl/py/Spreadsheet/AnnotationTable/composite_cell.py +78 -0
  242. arctrl/py/Spreadsheet/AnnotationTable/composite_column.py +210 -0
  243. arctrl/py/Spreadsheet/AnnotationTable/composite_header.py +623 -0
  244. arctrl/py/Spreadsheet/DataMapTable/__init__.py +0 -0
  245. arctrl/py/Spreadsheet/DataMapTable/data_map_column.py +114 -0
  246. arctrl/py/Spreadsheet/DataMapTable/data_map_header.py +618 -0
  247. arctrl/py/Spreadsheet/DataMapTable/data_map_table.py +119 -0
  248. arctrl/py/Spreadsheet/Metadata/__init__.py +0 -0
  249. arctrl/py/Spreadsheet/Metadata/assays.py +125 -0
  250. arctrl/py/Spreadsheet/Metadata/comment.py +77 -0
  251. arctrl/py/Spreadsheet/Metadata/contacts.py +134 -0
  252. arctrl/py/Spreadsheet/Metadata/conversions.py +190 -0
  253. arctrl/py/Spreadsheet/Metadata/design_descriptors.py +34 -0
  254. arctrl/py/Spreadsheet/Metadata/factors.py +107 -0
  255. arctrl/py/Spreadsheet/Metadata/ontology_annotation.py +88 -0
  256. arctrl/py/Spreadsheet/Metadata/ontology_source_reference.py +96 -0
  257. arctrl/py/Spreadsheet/Metadata/protocols.py +146 -0
  258. arctrl/py/Spreadsheet/Metadata/publication.py +122 -0
  259. arctrl/py/Spreadsheet/Metadata/run.py +122 -0
  260. arctrl/py/Spreadsheet/Metadata/sparse_table.py +508 -0
  261. arctrl/py/Spreadsheet/Metadata/study.py +312 -0
  262. arctrl/py/Spreadsheet/Metadata/workflow.py +151 -0
  263. arctrl/py/Spreadsheet/__init__.py +0 -0
  264. arctrl/py/Spreadsheet/arc_assay.py +233 -0
  265. arctrl/py/Spreadsheet/arc_investigation.py +418 -0
  266. arctrl/py/Spreadsheet/arc_run.py +190 -0
  267. arctrl/py/Spreadsheet/arc_study.py +144 -0
  268. arctrl/py/Spreadsheet/arc_workflow.py +176 -0
  269. arctrl/py/Spreadsheet/assembly_info.py +1 -0
  270. arctrl/py/Spreadsheet/collection_aux.py +167 -0
  271. arctrl/py/Spreadsheet/data_map.py +44 -0
  272. arctrl/py/Spreadsheet/template.py +460 -0
  273. arctrl/py/ValidationPackages/__init__.py +0 -0
  274. arctrl/py/ValidationPackages/validation_package.py +82 -0
  275. arctrl/py/ValidationPackages/validation_packages_config.py +132 -0
  276. arctrl/py/WebRequest/__init__.py +0 -0
  277. arctrl/py/WebRequest/web_request.py +9 -0
  278. arctrl/py/WebRequest/web_request_py.py +135 -0
  279. arctrl/py/Yaml/__init__.py +0 -0
  280. arctrl/py/Yaml/decode.py +1 -0
  281. arctrl/py/Yaml/encode.py +10 -0
  282. arctrl/py/Yaml/validation_package.py +77 -0
  283. arctrl/py/Yaml/validation_packages_config.py +86 -0
  284. arctrl/py/__init__.py +0 -0
  285. arctrl/py/arc.py +1400 -0
  286. arctrl/py/column_index.py +280 -0
  287. arctrl/py/conversion.py +2184 -0
  288. arctrl/py/cross_async.py +76 -0
  289. arctrl/py/fable_modules/dynamic_obj/__init__.py +0 -0
  290. arctrl/py/fable_modules/dynamic_obj/dyn_obj.py +136 -0
  291. arctrl/py/fable_modules/dynamic_obj/dynamic_obj.py +415 -0
  292. arctrl/py/fable_modules/dynamic_obj/fable_js.py +1 -0
  293. arctrl/py/fable_modules/dynamic_obj/fable_py.py +288 -0
  294. arctrl/py/fable_modules/dynamic_obj/hash_codes.py +82 -0
  295. arctrl/py/fable_modules/dynamic_obj/property_helper.py +25 -0
  296. arctrl/py/fable_modules/dynamic_obj/reflection_utils.py +87 -0
  297. arctrl/py/fable_modules/fable_library/__init__.py +0 -0
  298. arctrl/py/fable_modules/fable_library/array_.py +1528 -0
  299. arctrl/py/fable_modules/fable_library/async_.py +377 -0
  300. arctrl/py/fable_modules/fable_library/async_builder.py +379 -0
  301. arctrl/py/fable_modules/fable_library/big_int.py +330 -0
  302. arctrl/py/fable_modules/fable_library/bit_converter.py +131 -0
  303. arctrl/py/fable_modules/fable_library/boolean.py +26 -0
  304. arctrl/py/fable_modules/fable_library/char.py +237 -0
  305. arctrl/py/fable_modules/fable_library/choice.py +212 -0
  306. arctrl/py/fable_modules/fable_library/date.py +779 -0
  307. arctrl/py/fable_modules/fable_library/date_offset.py +79 -0
  308. arctrl/py/fable_modules/fable_library/decimal_.py +190 -0
  309. arctrl/py/fable_modules/fable_library/diagnostics.py +54 -0
  310. arctrl/py/fable_modules/fable_library/double.py +87 -0
  311. arctrl/py/fable_modules/fable_library/encoding.py +41 -0
  312. arctrl/py/fable_modules/fable_library/event.py +206 -0
  313. arctrl/py/fable_modules/fable_library/file.py +107 -0
  314. arctrl/py/fable_modules/fable_library/fsharp_collections.py +52 -0
  315. arctrl/py/fable_modules/fable_library/fsharp_core.py +123 -0
  316. arctrl/py/fable_modules/fable_library/global_.py +63 -0
  317. arctrl/py/fable_modules/fable_library/guid.py +41 -0
  318. arctrl/py/fable_modules/fable_library/int32.py +73 -0
  319. arctrl/py/fable_modules/fable_library/list.py +1788 -0
  320. arctrl/py/fable_modules/fable_library/long.py +240 -0
  321. arctrl/py/fable_modules/fable_library/mailbox_processor.py +179 -0
  322. arctrl/py/fable_modules/fable_library/map.py +1854 -0
  323. arctrl/py/fable_modules/fable_library/map_util.py +148 -0
  324. arctrl/py/fable_modules/fable_library/mutable_map.py +397 -0
  325. arctrl/py/fable_modules/fable_library/mutable_set.py +279 -0
  326. arctrl/py/fable_modules/fable_library/native.py +45 -0
  327. arctrl/py/fable_modules/fable_library/numeric.py +46 -0
  328. arctrl/py/fable_modules/fable_library/observable.py +222 -0
  329. arctrl/py/fable_modules/fable_library/option.py +128 -0
  330. arctrl/py/fable_modules/fable_library/path.py +62 -0
  331. arctrl/py/fable_modules/fable_library/range.py +117 -0
  332. arctrl/py/fable_modules/fable_library/reflection.py +463 -0
  333. arctrl/py/fable_modules/fable_library/reg_exp.py +137 -0
  334. arctrl/py/fable_modules/fable_library/resize_array.py +31 -0
  335. arctrl/py/fable_modules/fable_library/result.py +212 -0
  336. arctrl/py/fable_modules/fable_library/seq.py +1979 -0
  337. arctrl/py/fable_modules/fable_library/seq2.py +221 -0
  338. arctrl/py/fable_modules/fable_library/set.py +2414 -0
  339. arctrl/py/fable_modules/fable_library/singleton_local_time_zone.py +36 -0
  340. arctrl/py/fable_modules/fable_library/string_.py +573 -0
  341. arctrl/py/fable_modules/fable_library/system_collections_generic.py +462 -0
  342. arctrl/py/fable_modules/fable_library/system_text.py +237 -0
  343. arctrl/py/fable_modules/fable_library/task.py +116 -0
  344. arctrl/py/fable_modules/fable_library/task_builder.py +122 -0
  345. arctrl/py/fable_modules/fable_library/thread.py +5 -0
  346. arctrl/py/fable_modules/fable_library/time_span.py +283 -0
  347. arctrl/py/fable_modules/fable_library/timer.py +24 -0
  348. arctrl/py/fable_modules/fable_library/types.py +401 -0
  349. arctrl/py/fable_modules/fable_library/uri.py +109 -0
  350. arctrl/py/fable_modules/fable_library/util.py +2735 -0
  351. arctrl/py/fable_modules/fable_openpyxl/__init__.py +0 -0
  352. arctrl/py/fable_modules/fable_openpyxl/openpyxl.py +362 -0
  353. arctrl/py/fable_modules/fable_python/cognite-sdk/__init__.py +0 -0
  354. arctrl/py/fable_modules/fable_python/cognite-sdk/cognite_sdk.py +22 -0
  355. arctrl/py/fable_modules/fable_python/flask/__init__.py +0 -0
  356. arctrl/py/fable_modules/fable_python/flask/flask.py +34 -0
  357. arctrl/py/fable_modules/fable_python/jupyter/__init__.py +0 -0
  358. arctrl/py/fable_modules/fable_python/jupyter/ipy_widgets.py +47 -0
  359. arctrl/py/fable_modules/fable_python/jupyter/ipython.py +13 -0
  360. arctrl/py/fable_modules/fable_python/stdlib/__init__.py +0 -0
  361. arctrl/py/fable_modules/fable_python/stdlib/ast.py +1 -0
  362. arctrl/py/fable_modules/fable_python/stdlib/asyncio/__init__.py +0 -0
  363. arctrl/py/fable_modules/fable_python/stdlib/asyncio/events.py +17 -0
  364. arctrl/py/fable_modules/fable_python/stdlib/asyncio/futures.py +52 -0
  365. arctrl/py/fable_modules/fable_python/stdlib/asyncio/tasks.py +38 -0
  366. arctrl/py/fable_modules/fable_python/stdlib/base64_.py +1 -0
  367. arctrl/py/fable_modules/fable_python/stdlib/builtins_.py +38 -0
  368. arctrl/py/fable_modules/fable_python/stdlib/html.py +1 -0
  369. arctrl/py/fable_modules/fable_python/stdlib/json.py +1 -0
  370. arctrl/py/fable_modules/fable_python/stdlib/math_.py +1 -0
  371. arctrl/py/fable_modules/fable_python/stdlib/os_.py +1 -0
  372. arctrl/py/fable_modules/fable_python/stdlib/queue_.py +1 -0
  373. arctrl/py/fable_modules/fable_python/stdlib/string_.py +1 -0
  374. arctrl/py/fable_modules/fable_python/stdlib/sys_.py +30 -0
  375. arctrl/py/fable_modules/fable_python/stdlib/time_.py +1 -0
  376. arctrl/py/fable_modules/fable_python/stdlib/tk_inter.py +1 -0
  377. arctrl/py/fable_modules/fs_spreadsheet/Cells/__init__.py +0 -0
  378. arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cell.py +338 -0
  379. arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +469 -0
  380. arctrl/py/fable_modules/fs_spreadsheet/DSL/__init__.py +0 -0
  381. arctrl/py/fable_modules/fs_spreadsheet/DSL/cell_builder.py +214 -0
  382. arctrl/py/fable_modules/fs_spreadsheet/DSL/column_builder.py +139 -0
  383. arctrl/py/fable_modules/fs_spreadsheet/DSL/dsl.py +50 -0
  384. arctrl/py/fable_modules/fs_spreadsheet/DSL/expression.py +65 -0
  385. arctrl/py/fable_modules/fs_spreadsheet/DSL/operators.py +9 -0
  386. arctrl/py/fable_modules/fs_spreadsheet/DSL/row_builder.py +139 -0
  387. arctrl/py/fable_modules/fs_spreadsheet/DSL/sheet_builder.py +118 -0
  388. arctrl/py/fable_modules/fs_spreadsheet/DSL/table_builder.py +122 -0
  389. arctrl/py/fable_modules/fs_spreadsheet/DSL/transform.py +464 -0
  390. arctrl/py/fable_modules/fs_spreadsheet/DSL/types.py +314 -0
  391. arctrl/py/fable_modules/fs_spreadsheet/DSL/workbook_builder.py +106 -0
  392. arctrl/py/fable_modules/fs_spreadsheet/Json/__init__.py +0 -0
  393. arctrl/py/fable_modules/fs_spreadsheet/Json/cell.py +103 -0
  394. arctrl/py/fable_modules/fs_spreadsheet/Json/column.py +70 -0
  395. arctrl/py/fable_modules/fs_spreadsheet/Json/row.py +70 -0
  396. arctrl/py/fable_modules/fs_spreadsheet/Json/table.py +57 -0
  397. arctrl/py/fable_modules/fs_spreadsheet/Json/value.py +93 -0
  398. arctrl/py/fable_modules/fs_spreadsheet/Json/workbook.py +71 -0
  399. arctrl/py/fable_modules/fs_spreadsheet/Json/worksheet.py +217 -0
  400. arctrl/py/fable_modules/fs_spreadsheet/Ranges/__init__.py +0 -0
  401. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range.py +47 -0
  402. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +186 -0
  403. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +90 -0
  404. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_column.py +78 -0
  405. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +48 -0
  406. arctrl/py/fable_modules/fs_spreadsheet/Tables/__init__.py +0 -0
  407. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table.py +393 -0
  408. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_field.py +127 -0
  409. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_row.py +23 -0
  410. arctrl/py/fable_modules/fs_spreadsheet/__init__.py +0 -0
  411. arctrl/py/fable_modules/fs_spreadsheet/fs_address.py +218 -0
  412. arctrl/py/fable_modules/fs_spreadsheet/fs_column.py +172 -0
  413. arctrl/py/fable_modules/fs_spreadsheet/fs_row.py +183 -0
  414. arctrl/py/fable_modules/fs_spreadsheet/fs_workbook.py +180 -0
  415. arctrl/py/fable_modules/fs_spreadsheet/fs_worksheet.py +600 -0
  416. arctrl/py/fable_modules/fs_spreadsheet/sheet_builder.py +330 -0
  417. arctrl/py/fable_modules/fs_spreadsheet_py/__init__.py +0 -0
  418. arctrl/py/fable_modules/fs_spreadsheet_py/cell.py +63 -0
  419. arctrl/py/fable_modules/fs_spreadsheet_py/cell_type.py +50 -0
  420. arctrl/py/fable_modules/fs_spreadsheet_py/fs_extension.py +60 -0
  421. arctrl/py/fable_modules/fs_spreadsheet_py/json.py +47 -0
  422. arctrl/py/fable_modules/fs_spreadsheet_py/table.py +53 -0
  423. arctrl/py/fable_modules/fs_spreadsheet_py/workbook.py +40 -0
  424. arctrl/py/fable_modules/fs_spreadsheet_py/worksheet.py +54 -0
  425. arctrl/py/fable_modules/fs_spreadsheet_py/xlsx.py +37 -0
  426. arctrl/py/fable_modules/thoth_json_core/__init__.py +0 -0
  427. arctrl/py/fable_modules/thoth_json_core/decode.py +1588 -0
  428. arctrl/py/fable_modules/thoth_json_core/encode.py +261 -0
  429. arctrl/py/fable_modules/thoth_json_core/types.py +181 -0
  430. arctrl/py/fable_modules/thoth_json_python/__init__.py +0 -0
  431. arctrl/py/fable_modules/thoth_json_python/decode.py +112 -0
  432. arctrl/py/fable_modules/thoth_json_python/encode.py +72 -0
  433. arctrl/py/fable_modules/thoth_json_python/python.py +1 -0
  434. arctrl/py/fable_modules/yamlicious/Interop/__init__.py +0 -0
  435. arctrl/py/fable_modules/yamlicious/Interop/js_interop.py +1 -0
  436. arctrl/py/fable_modules/yamlicious/Interop/py_interop.py +7 -0
  437. arctrl/py/fable_modules/yamlicious/__init__.py +0 -0
  438. arctrl/py/fable_modules/yamlicious/decode.py +1784 -0
  439. arctrl/py/fable_modules/yamlicious/encode.py +84 -0
  440. arctrl/py/fable_modules/yamlicious/library.py +10 -0
  441. arctrl/py/fable_modules/yamlicious/persil.py +57 -0
  442. arctrl/py/fable_modules/yamlicious/preprocessing.py +99 -0
  443. arctrl/py/fable_modules/yamlicious/reader.py +665 -0
  444. arctrl/py/fable_modules/yamlicious/regex.py +21 -0
  445. arctrl/py/fable_modules/yamlicious/regex_active_patterns.py +256 -0
  446. arctrl/py/fable_modules/yamlicious/writer.py +175 -0
  447. arctrl/py/fable_modules/yamlicious/yamlicious_types.py +128 -0
  448. arctrl/py/json.py +213 -0
  449. arctrl/py/rocrate_io.py +72 -0
  450. arctrl/py/template_web.py +23 -0
  451. arctrl/py/xlsx.py +148 -0
  452. arctrl/rocrate.py +21 -0
  453. arctrl-3.0.0a3.dist-info/LICENSE +21 -0
  454. arctrl-3.0.0a3.dist-info/METADATA +119 -0
  455. arctrl-3.0.0a3.dist-info/RECORD +456 -0
  456. arctrl-3.0.0a3.dist-info/WHEEL +4 -0
@@ -0,0 +1,206 @@
1
+ from __future__ import annotations
2
+ from collections.abc import Callable
3
+ from typing import (Any, TypeVar)
4
+ from ..fable_modules.fable_library.list import (choose, of_array, FSharpList)
5
+ from ..fable_modules.fable_library.option import (map, value as value_6)
6
+ from ..fable_modules.fable_library.seq import map as map_1
7
+ from ..fable_modules.fable_library.string_ import replace
8
+ from ..fable_modules.fable_library.types import to_string
9
+ from ..fable_modules.fable_library.util import IEnumerable_1
10
+ from ..fable_modules.thoth_json_core.decode import (object, IOptionalGetter, string, IGetters, map as map_2)
11
+ from ..fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1, Decoder_1)
12
+ from ..Core.comment import Comment
13
+ from .context.rocrate.isa_comment_context import context_jsonvalue
14
+ from .encode import try_include
15
+ from .idtable import encode
16
+
17
+ __A_ = TypeVar("__A_")
18
+
19
+ def encoder(comment: Comment) -> IEncodable:
20
+ def chooser(tupled_arg: tuple[str, IEncodable | None], comment: Any=comment) -> tuple[str, IEncodable] | None:
21
+ def mapping(v_1: IEncodable, tupled_arg: Any=tupled_arg) -> tuple[str, IEncodable]:
22
+ return (tupled_arg[0], v_1)
23
+
24
+ return map(mapping, tupled_arg[1])
25
+
26
+ def _arrow1973(value: str, comment: Any=comment) -> IEncodable:
27
+ class ObjectExpr1972(IEncodable):
28
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
29
+ return helpers.encode_string(value)
30
+
31
+ return ObjectExpr1972()
32
+
33
+ def _arrow1975(value_2: str, comment: Any=comment) -> IEncodable:
34
+ class ObjectExpr1974(IEncodable):
35
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
36
+ return helpers_1.encode_string(value_2)
37
+
38
+ return ObjectExpr1974()
39
+
40
+ values: FSharpList[tuple[str, IEncodable]] = choose(chooser, of_array([try_include("name", _arrow1973, comment.Name), try_include("value", _arrow1975, comment.Value)]))
41
+ class ObjectExpr1976(IEncodable):
42
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any], comment: Any=comment) -> Any:
43
+ def mapping_1(tupled_arg_1: tuple[str, IEncodable]) -> tuple[str, __A_]:
44
+ return (tupled_arg_1[0], tupled_arg_1[1].Encode(helpers_2))
45
+
46
+ arg: IEnumerable_1[tuple[str, __A_]] = map_1(mapping_1, values)
47
+ return helpers_2.encode_object(arg)
48
+
49
+ return ObjectExpr1976()
50
+
51
+
52
+ def _arrow1979(get: IGetters) -> Comment:
53
+ def _arrow1977(__unit: None=None) -> str | None:
54
+ object_arg: IOptionalGetter = get.Optional
55
+ return object_arg.Field("name", string)
56
+
57
+ def _arrow1978(__unit: None=None) -> str | None:
58
+ object_arg_1: IOptionalGetter = get.Optional
59
+ return object_arg_1.Field("value", string)
60
+
61
+ return Comment(_arrow1977(), _arrow1978())
62
+
63
+
64
+ decoder: Decoder_1[Comment] = object(_arrow1979)
65
+
66
+ def ROCrate_genID(c: Comment) -> str:
67
+ match_value: str | None = c.Name
68
+ if match_value is None:
69
+ return "#EmptyComment"
70
+
71
+ else:
72
+ n: str = match_value
73
+ v: str = ("_" + replace(value_6(c.Value), " ", "_")) if (c.Value is not None) else ""
74
+ return ("#Comment_" + replace(n, " ", "_")) + v
75
+
76
+
77
+
78
+ def ROCrate_encoder(comment: Comment) -> IEncodable:
79
+ def chooser(tupled_arg: tuple[str, IEncodable | None], comment: Any=comment) -> tuple[str, IEncodable] | None:
80
+ def mapping(v_1: IEncodable, tupled_arg: Any=tupled_arg) -> tuple[str, IEncodable]:
81
+ return (tupled_arg[0], v_1)
82
+
83
+ return map(mapping, tupled_arg[1])
84
+
85
+ def _arrow1983(__unit: None=None, comment: Any=comment) -> IEncodable:
86
+ value: str = ROCrate_genID(comment)
87
+ class ObjectExpr1982(IEncodable):
88
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
89
+ return helpers.encode_string(value)
90
+
91
+ return ObjectExpr1982()
92
+
93
+ class ObjectExpr1984(IEncodable):
94
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any], comment: Any=comment) -> Any:
95
+ return helpers_1.encode_string("Comment")
96
+
97
+ def _arrow1986(value_2: str, comment: Any=comment) -> IEncodable:
98
+ class ObjectExpr1985(IEncodable):
99
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
100
+ return helpers_2.encode_string(value_2)
101
+
102
+ return ObjectExpr1985()
103
+
104
+ def _arrow1988(value_4: str, comment: Any=comment) -> IEncodable:
105
+ class ObjectExpr1987(IEncodable):
106
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
107
+ return helpers_3.encode_string(value_4)
108
+
109
+ return ObjectExpr1987()
110
+
111
+ values: FSharpList[tuple[str, IEncodable]] = choose(chooser, of_array([("@id", _arrow1983()), ("@type", ObjectExpr1984()), try_include("name", _arrow1986, comment.Name), try_include("value", _arrow1988, comment.Value), ("@context", context_jsonvalue)]))
112
+ class ObjectExpr1989(IEncodable):
113
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any], comment: Any=comment) -> Any:
114
+ def mapping_1(tupled_arg_1: tuple[str, IEncodable]) -> tuple[str, __A_]:
115
+ return (tupled_arg_1[0], tupled_arg_1[1].Encode(helpers_4))
116
+
117
+ arg: IEnumerable_1[tuple[str, __A_]] = map_1(mapping_1, values)
118
+ return helpers_4.encode_object(arg)
119
+
120
+ return ObjectExpr1989()
121
+
122
+
123
+ def _arrow1992(get: IGetters) -> Comment:
124
+ def _arrow1990(__unit: None=None) -> str | None:
125
+ object_arg: IOptionalGetter = get.Optional
126
+ return object_arg.Field("name", string)
127
+
128
+ def _arrow1991(__unit: None=None) -> str | None:
129
+ object_arg_1: IOptionalGetter = get.Optional
130
+ return object_arg_1.Field("value", string)
131
+
132
+ return Comment(_arrow1990(), _arrow1991())
133
+
134
+
135
+ ROCrate_decoder: Decoder_1[Comment] = object(_arrow1992)
136
+
137
+ def ROCrate_encoderDisambiguatingDescription(comment: Comment) -> IEncodable:
138
+ value: str = to_string(comment)
139
+ class ObjectExpr1993(IEncodable):
140
+ def Encode(self, helpers: IEncoderHelpers_1[Any], comment: Any=comment) -> Any:
141
+ return helpers.encode_string(value)
142
+
143
+ return ObjectExpr1993()
144
+
145
+
146
+ def ctor(s: str) -> Comment:
147
+ return Comment.from_string(s)
148
+
149
+
150
+ ROCrate_decoderDisambiguatingDescription: Decoder_1[Comment] = map_2(ctor, string)
151
+
152
+ def ISAJson_encoder(id_map: Any | None, comment: Comment) -> IEncodable:
153
+ def f(comment_1: Comment, id_map: Any=id_map, comment: Any=comment) -> IEncodable:
154
+ def chooser(tupled_arg: tuple[str, IEncodable | None], comment_1: Any=comment_1) -> tuple[str, IEncodable] | None:
155
+ def mapping(v_1: IEncodable, tupled_arg: Any=tupled_arg) -> tuple[str, IEncodable]:
156
+ return (tupled_arg[0], v_1)
157
+
158
+ return map(mapping, tupled_arg[1])
159
+
160
+ def _arrow1997(value: str, comment_1: Any=comment_1) -> IEncodable:
161
+ class ObjectExpr1996(IEncodable):
162
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
163
+ return helpers.encode_string(value)
164
+
165
+ return ObjectExpr1996()
166
+
167
+ def _arrow1999(value_2: str, comment_1: Any=comment_1) -> IEncodable:
168
+ class ObjectExpr1998(IEncodable):
169
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
170
+ return helpers_1.encode_string(value_2)
171
+
172
+ return ObjectExpr1998()
173
+
174
+ def _arrow2001(value_4: str, comment_1: Any=comment_1) -> IEncodable:
175
+ class ObjectExpr2000(IEncodable):
176
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
177
+ return helpers_2.encode_string(value_4)
178
+
179
+ return ObjectExpr2000()
180
+
181
+ values: FSharpList[tuple[str, IEncodable]] = choose(chooser, of_array([try_include("@id", _arrow1997, ROCrate_genID(comment_1)), try_include("name", _arrow1999, comment_1.Name), try_include("value", _arrow2001, comment_1.Value)]))
182
+ class ObjectExpr2002(IEncodable):
183
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any], comment_1: Any=comment_1) -> Any:
184
+ def mapping_1(tupled_arg_1: tuple[str, IEncodable]) -> tuple[str, __A_]:
185
+ return (tupled_arg_1[0], tupled_arg_1[1].Encode(helpers_3))
186
+
187
+ arg: IEnumerable_1[tuple[str, __A_]] = map_1(mapping_1, values)
188
+ return helpers_3.encode_object(arg)
189
+
190
+ return ObjectExpr2002()
191
+
192
+ if id_map is None:
193
+ return f(comment)
194
+
195
+ else:
196
+ def _arrow2003(c: Comment, id_map: Any=id_map, comment: Any=comment) -> str:
197
+ return ROCrate_genID(c)
198
+
199
+ return encode(_arrow2003, f, comment, id_map)
200
+
201
+
202
+
203
+ ISAJson_decoder: Decoder_1[Comment] = decoder
204
+
205
+ __all__ = ["encoder", "decoder", "ROCrate_genID", "ROCrate_encoder", "ROCrate_decoder", "ROCrate_encoderDisambiguatingDescription", "ROCrate_decoderDisambiguatingDescription", "ISAJson_encoder", "ISAJson_decoder"]
206
+
File without changes
@@ -0,0 +1,101 @@
1
+ from __future__ import annotations
2
+ from dataclasses import dataclass
3
+ from typing import (Any, TypeVar)
4
+ from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
5
+ from ....fable_modules.fable_library.seq import map
6
+ from ....fable_modules.fable_library.types import Record
7
+ from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
8
+ from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
9
+
10
+ __A_ = TypeVar("__A_")
11
+
12
+ def _expr1611() -> TypeInfo:
13
+ return record_type("ARCtrl.Json.ROCrateContext.Assay.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Assay", string_type), ("ArcAssay", string_type), ("measurement_type", string_type), ("technology_type", string_type), ("technology_platform", string_type), ("data_files", string_type), ("materials", string_type), ("other_materials", string_type), ("samples", string_type), ("characteristic_categories", string_type), ("process_sequence", string_type), ("unit_categories", string_type), ("comments", string_type), ("filename", string_type)])
14
+
15
+
16
+ @dataclass(eq = False, repr = False, slots = True)
17
+ class IContext(Record):
18
+ sdo: str
19
+ arc: str
20
+ Assay: str
21
+ ArcAssay: str
22
+ measurement_type: str
23
+ technology_type: str
24
+ technology_platform: str
25
+ data_files: str
26
+ materials: str
27
+ other_materials: str
28
+ samples: str
29
+ characteristic_categories: str
30
+ process_sequence: str
31
+ unit_categories: str
32
+ comments: str
33
+ filename: str
34
+
35
+ IContext_reflection = _expr1611
36
+
37
+ def _arrow1625(__unit: None=None) -> IEncodable:
38
+ class ObjectExpr1612(IEncodable):
39
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
40
+ return helpers.encode_string("http://schema.org/")
41
+
42
+ class ObjectExpr1613(IEncodable):
43
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
44
+ return helpers_1.encode_string("sdo:Dataset")
45
+
46
+ class ObjectExpr1614(IEncodable):
47
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
48
+ return helpers_2.encode_string("sdo:identifier")
49
+
50
+ class ObjectExpr1615(IEncodable):
51
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
52
+ return helpers_3.encode_string("sdo:additionalType")
53
+
54
+ class ObjectExpr1616(IEncodable):
55
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
56
+ return helpers_4.encode_string("sdo:variableMeasured")
57
+
58
+ class ObjectExpr1617(IEncodable):
59
+ def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
60
+ return helpers_5.encode_string("sdo:measurementTechnique")
61
+
62
+ class ObjectExpr1618(IEncodable):
63
+ def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
64
+ return helpers_6.encode_string("sdo:measurementMethod")
65
+
66
+ class ObjectExpr1619(IEncodable):
67
+ def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
68
+ return helpers_7.encode_string("sdo:hasPart")
69
+
70
+ class ObjectExpr1620(IEncodable):
71
+ def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
72
+ return helpers_8.encode_string("sdo:creator")
73
+
74
+ class ObjectExpr1621(IEncodable):
75
+ def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
76
+ return helpers_9.encode_string("sdo:about")
77
+
78
+ class ObjectExpr1622(IEncodable):
79
+ def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
80
+ return helpers_10.encode_string("sdo:comment")
81
+
82
+ class ObjectExpr1623(IEncodable):
83
+ def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
84
+ return helpers_11.encode_string("sdo:url")
85
+
86
+ values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1612()), ("Assay", ObjectExpr1613()), ("identifier", ObjectExpr1614()), ("additionalType", ObjectExpr1615()), ("measurementType", ObjectExpr1616()), ("technologyType", ObjectExpr1617()), ("technologyPlatform", ObjectExpr1618()), ("dataFiles", ObjectExpr1619()), ("performers", ObjectExpr1620()), ("processSequence", ObjectExpr1621()), ("comments", ObjectExpr1622()), ("filename", ObjectExpr1623())])
87
+ class ObjectExpr1624(IEncodable):
88
+ def Encode(self, helpers_12: IEncoderHelpers_1[Any]) -> Any:
89
+ def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
90
+ return (tupled_arg[0], tupled_arg[1].Encode(helpers_12))
91
+
92
+ arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
93
+ return helpers_12.encode_object(arg)
94
+
95
+ return ObjectExpr1624()
96
+
97
+
98
+ context_jsonvalue: IEncodable = _arrow1625()
99
+
100
+ __all__ = ["IContext_reflection", "context_jsonvalue"]
101
+
@@ -0,0 +1,60 @@
1
+ from __future__ import annotations
2
+ from dataclasses import dataclass
3
+ from typing import (Any, TypeVar)
4
+ from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
5
+ from ....fable_modules.fable_library.seq import map
6
+ from ....fable_modules.fable_library.types import Record
7
+ from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
8
+ from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
9
+
10
+ __A_ = TypeVar("__A_")
11
+
12
+ def _expr1626() -> TypeInfo:
13
+ return record_type("ARCtrl.Json.ROCrateContext.Comment.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Comment", string_type), ("name", string_type), ("value", string_type)])
14
+
15
+
16
+ @dataclass(eq = False, repr = False, slots = True)
17
+ class IContext(Record):
18
+ sdo: str
19
+ arc: str
20
+ Comment: str
21
+ name: str
22
+ value: str
23
+
24
+ IContext_reflection = _expr1626
25
+
26
+ def _arrow1632(__unit: None=None) -> IEncodable:
27
+ class ObjectExpr1627(IEncodable):
28
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
29
+ return helpers.encode_string("http://schema.org/")
30
+
31
+ class ObjectExpr1628(IEncodable):
32
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
33
+ return helpers_1.encode_string("sdo:Comment")
34
+
35
+ class ObjectExpr1629(IEncodable):
36
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
37
+ return helpers_2.encode_string("sdo:name")
38
+
39
+ class ObjectExpr1630(IEncodable):
40
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
41
+ return helpers_3.encode_string("sdo:text")
42
+
43
+ values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1627()), ("Comment", ObjectExpr1628()), ("name", ObjectExpr1629()), ("value", ObjectExpr1630())])
44
+ class ObjectExpr1631(IEncodable):
45
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
46
+ def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
47
+ return (tupled_arg[0], tupled_arg[1].Encode(helpers_4))
48
+
49
+ arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
50
+ return helpers_4.encode_object(arg)
51
+
52
+ return ObjectExpr1631()
53
+
54
+
55
+ context_jsonvalue: IEncodable = _arrow1632()
56
+
57
+ context_str: str = "\r\n{\r\n \"@context\": {\r\n \"sdo\": \"http://schema.org/\",\r\n \r\n \"Comment\": \"sdo:Comment\",\r\n \"name\": \"sdo:name\",\r\n \"value\": \"sdo:text\"\r\n }\r\n}\r\n "
58
+
59
+ __all__ = ["IContext_reflection", "context_jsonvalue", "context_str"]
60
+
@@ -0,0 +1,77 @@
1
+ from __future__ import annotations
2
+ from dataclasses import dataclass
3
+ from typing import (Any, TypeVar)
4
+ from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
5
+ from ....fable_modules.fable_library.seq import map
6
+ from ....fable_modules.fable_library.types import Record
7
+ from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
8
+ from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
9
+
10
+ __A_ = TypeVar("__A_")
11
+
12
+ def _expr1633() -> TypeInfo:
13
+ return record_type("ARCtrl.Json.ROCrateContext.Component.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Component", string_type), ("ArcComponent", string_type), ("component_name", string_type), ("component_type", string_type)])
14
+
15
+
16
+ @dataclass(eq = False, repr = False, slots = True)
17
+ class IContext(Record):
18
+ sdo: str
19
+ arc: str
20
+ Component: str
21
+ ArcComponent: str
22
+ component_name: str
23
+ component_type: str
24
+
25
+ IContext_reflection = _expr1633
26
+
27
+ def _arrow1643(__unit: None=None) -> IEncodable:
28
+ class ObjectExpr1634(IEncodable):
29
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
30
+ return helpers.encode_string("http://schema.org/")
31
+
32
+ class ObjectExpr1635(IEncodable):
33
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
34
+ return helpers_1.encode_string("sdo:PropertyValue")
35
+
36
+ class ObjectExpr1636(IEncodable):
37
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
38
+ return helpers_2.encode_string("sdo:name")
39
+
40
+ class ObjectExpr1637(IEncodable):
41
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
42
+ return helpers_3.encode_string("sdo:propertyID")
43
+
44
+ class ObjectExpr1638(IEncodable):
45
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
46
+ return helpers_4.encode_string("sdo:value")
47
+
48
+ class ObjectExpr1639(IEncodable):
49
+ def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
50
+ return helpers_5.encode_string("sdo:valueReference")
51
+
52
+ class ObjectExpr1640(IEncodable):
53
+ def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
54
+ return helpers_6.encode_string("sdo:unitText")
55
+
56
+ class ObjectExpr1641(IEncodable):
57
+ def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
58
+ return helpers_7.encode_string("sdo:unitCode")
59
+
60
+ values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1634()), ("Component", ObjectExpr1635()), ("category", ObjectExpr1636()), ("categoryCode", ObjectExpr1637()), ("value", ObjectExpr1638()), ("valueCode", ObjectExpr1639()), ("unit", ObjectExpr1640()), ("unitCode", ObjectExpr1641())])
61
+ class ObjectExpr1642(IEncodable):
62
+ def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
63
+ def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
64
+ return (tupled_arg[0], tupled_arg[1].Encode(helpers_8))
65
+
66
+ arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
67
+ return helpers_8.encode_object(arg)
68
+
69
+ return ObjectExpr1642()
70
+
71
+
72
+ context_jsonvalue: IEncodable = _arrow1643()
73
+
74
+ context_str: str = "\r\n{\r\n \"@context\": {\r\n \"sdo\": \"http://schema.org/\",\r\n \r\n \"Component\": \"sdo:PropertyValue\",\r\n\r\n \"componentName\": \"sdo\",\r\n \"componentType\": \"arc:ARC#ARC_00000102\"\r\n }\r\n}\r\n "
75
+
76
+ __all__ = ["IContext_reflection", "context_jsonvalue", "context_str"]
77
+
@@ -0,0 +1,74 @@
1
+ from __future__ import annotations
2
+ from dataclasses import dataclass
3
+ from typing import (Any, TypeVar)
4
+ from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
5
+ from ....fable_modules.fable_library.seq import map
6
+ from ....fable_modules.fable_library.types import Record
7
+ from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
8
+ from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
9
+
10
+ __A_ = TypeVar("__A_")
11
+
12
+ def _expr1644() -> TypeInfo:
13
+ return record_type("ARCtrl.Json.ROCrateContext.Data.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Data", string_type), ("ArcData", string_type), ("type", string_type), ("name", string_type), ("comments", string_type)])
14
+
15
+
16
+ @dataclass(eq = False, repr = False, slots = True)
17
+ class IContext(Record):
18
+ sdo: str
19
+ arc: str
20
+ Data: str
21
+ ArcData: str
22
+ type: str
23
+ name: str
24
+ comments: str
25
+
26
+ IContext_reflection = _expr1644
27
+
28
+ def _arrow1653(__unit: None=None) -> IEncodable:
29
+ class ObjectExpr1645(IEncodable):
30
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
31
+ return helpers.encode_string("http://schema.org/")
32
+
33
+ class ObjectExpr1646(IEncodable):
34
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
35
+ return helpers_1.encode_string("sdo:MediaObject")
36
+
37
+ class ObjectExpr1647(IEncodable):
38
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
39
+ return helpers_2.encode_string("sdo:disambiguatingDescription")
40
+
41
+ class ObjectExpr1648(IEncodable):
42
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
43
+ return helpers_3.encode_string("sdo:encodingFormat")
44
+
45
+ class ObjectExpr1649(IEncodable):
46
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
47
+ return helpers_4.encode_string("sdo:usageInfo")
48
+
49
+ class ObjectExpr1650(IEncodable):
50
+ def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
51
+ return helpers_5.encode_string("sdo:name")
52
+
53
+ class ObjectExpr1651(IEncodable):
54
+ def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
55
+ return helpers_6.encode_string("sdo:comment")
56
+
57
+ values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1645()), ("Data", ObjectExpr1646()), ("type", ObjectExpr1647()), ("encodingFormat", ObjectExpr1648()), ("usageInfo", ObjectExpr1649()), ("name", ObjectExpr1650()), ("comments", ObjectExpr1651())])
58
+ class ObjectExpr1652(IEncodable):
59
+ def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
60
+ def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
61
+ return (tupled_arg[0], tupled_arg[1].Encode(helpers_7))
62
+
63
+ arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
64
+ return helpers_7.encode_object(arg)
65
+
66
+ return ObjectExpr1652()
67
+
68
+
69
+ context_jsonvalue: IEncodable = _arrow1653()
70
+
71
+ context_str: str = "\r\n{\r\n \"@context\": {\r\n \"sdo\": \"http://schema.org/\",\r\n \"arc\": \"http://purl.org/nfdi4plants/ontology/\",\r\n\r\n \"Data\": \"sdo:MediaObject\",\r\n \"ArcData\": \"arc:ARC#ARC_00000076\",\r\n\r\n \"type\": \"arc:ARC#ARC_00000107\",\r\n\r\n \"name\": \"sdo:name\",\r\n \"comments\": \"sdo:disambiguatingDescription\"\r\n }\r\n}\r\n "
72
+
73
+ __all__ = ["IContext_reflection", "context_jsonvalue", "context_str"]
74
+
@@ -0,0 +1,74 @@
1
+ from __future__ import annotations
2
+ from dataclasses import dataclass
3
+ from typing import (Any, TypeVar)
4
+ from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
5
+ from ....fable_modules.fable_library.seq import map
6
+ from ....fable_modules.fable_library.types import Record
7
+ from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
8
+ from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
9
+
10
+ __A_ = TypeVar("__A_")
11
+
12
+ def _expr1654() -> TypeInfo:
13
+ return record_type("ARCtrl.Json.ROCrateContext.Factor.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Factor", string_type), ("ArcFactor", string_type), ("factor_name", string_type), ("factor_type", string_type), ("comments", string_type)])
14
+
15
+
16
+ @dataclass(eq = False, repr = False, slots = True)
17
+ class IContext(Record):
18
+ sdo: str
19
+ arc: str
20
+ Factor: str
21
+ ArcFactor: str
22
+ factor_name: str
23
+ factor_type: str
24
+ comments: str
25
+
26
+ IContext_reflection = _expr1654
27
+
28
+ def _arrow1663(__unit: None=None) -> IEncodable:
29
+ class ObjectExpr1655(IEncodable):
30
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
31
+ return helpers.encode_string("http://schema.org/")
32
+
33
+ class ObjectExpr1656(IEncodable):
34
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
35
+ return helpers_1.encode_string("sdo:DefinedTerm")
36
+
37
+ class ObjectExpr1657(IEncodable):
38
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
39
+ return helpers_2.encode_string("sdo:name")
40
+
41
+ class ObjectExpr1658(IEncodable):
42
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
43
+ return helpers_3.encode_string("sdo:name")
44
+
45
+ class ObjectExpr1659(IEncodable):
46
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
47
+ return helpers_4.encode_string("sdo:inDefinedTermSet")
48
+
49
+ class ObjectExpr1660(IEncodable):
50
+ def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
51
+ return helpers_5.encode_string("sdo:termCode")
52
+
53
+ class ObjectExpr1661(IEncodable):
54
+ def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
55
+ return helpers_6.encode_string("sdo:disambiguatingDescription")
56
+
57
+ values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr1655()), ("Factor", ObjectExpr1656()), ("factorName", ObjectExpr1657()), ("annotationValue", ObjectExpr1658()), ("termSource", ObjectExpr1659()), ("termAccession", ObjectExpr1660()), ("comments", ObjectExpr1661())])
58
+ class ObjectExpr1662(IEncodable):
59
+ def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
60
+ def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
61
+ return (tupled_arg[0], tupled_arg[1].Encode(helpers_7))
62
+
63
+ arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
64
+ return helpers_7.encode_object(arg)
65
+
66
+ return ObjectExpr1662()
67
+
68
+
69
+ context_jsonvalue: IEncodable = _arrow1663()
70
+
71
+ context_str: str = "\r\n{\r\n \"@context\": {\r\n \"sdo\": \"http://schema.org/\",\r\n \"arc\": \"http://purl.org/nfdi4plants/ontology/\",\r\n\r\n \"Factor\": \"sdo:Thing\",\r\n \"ArcFactor\": \"arc:ARC#ARC_00000044\",\r\n\r\n \"factorName\": \"arc:ARC#ARC_00000019\",\r\n \"factorType\": \"arc:ARC#ARC_00000078\",\r\n\r\n \"comments\": \"sdo:disambiguatingDescription\"\r\n }\r\n}\r\n "
72
+
73
+ __all__ = ["IContext_reflection", "context_jsonvalue", "context_str"]
74
+