@saibolla/ada 0.1.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.ada/SYSTEM.md +81 -0
- package/.ada/agents/researcher.md +69 -0
- package/.ada/agents/reviewer.md +92 -0
- package/.ada/agents/verifier.md +45 -0
- package/.ada/agents/writer.md +54 -0
- package/.ada/settings.json +32 -0
- package/.ada/themes/ada.json +85 -0
- package/.env.example +31 -0
- package/AGENTS.md +79 -0
- package/LICENSE +191 -0
- package/README.md +188 -0
- package/bin/ada.js +26 -0
- package/dist/bootstrap/sync.js +143 -0
- package/dist/cli.js +404 -0
- package/dist/config/paths.js +32 -0
- package/dist/index.js +10 -0
- package/dist/model/catalog.js +255 -0
- package/dist/model/commands.js +180 -0
- package/dist/pi/launch.js +33 -0
- package/dist/pi/package-presets.js +55 -0
- package/dist/pi/runtime.js +81 -0
- package/dist/pi/settings.js +108 -0
- package/dist/pi/web-access.js +74 -0
- package/dist/search/commands.js +12 -0
- package/dist/setup/doctor.js +126 -0
- package/dist/setup/preview.js +117 -0
- package/dist/setup/prompts.js +34 -0
- package/dist/setup/setup.js +98 -0
- package/dist/setup/update.js +133 -0
- package/dist/system/executables.js +38 -0
- package/dist/system/node-version.js +31 -0
- package/dist/system/open-url.js +35 -0
- package/dist/system/promise-polyfill.js +12 -0
- package/dist/ui/terminal.js +64 -0
- package/dist/web/launch.js +48 -0
- package/dist/web-search.js +1 -0
- package/extensions/docparser/constants.ts +62 -0
- package/extensions/docparser/deps.ts +584 -0
- package/extensions/docparser/doctor.ts +353 -0
- package/extensions/docparser/index.ts +9 -0
- package/extensions/docparser/input.ts +230 -0
- package/extensions/docparser/request.ts +67 -0
- package/extensions/docparser/schema.ts +82 -0
- package/extensions/docparser/tool.ts +305 -0
- package/extensions/docparser/types.ts +99 -0
- package/extensions/research-tools/alpha.ts +107 -0
- package/extensions/research-tools/header.ts +284 -0
- package/extensions/research-tools/help.ts +93 -0
- package/extensions/research-tools/project-scaffold.ts +64 -0
- package/extensions/research-tools/project.ts +123 -0
- package/extensions/research-tools/shared.ts +16 -0
- package/extensions/research-tools.ts +42 -0
- package/logo.d.mts +3 -0
- package/logo.mjs +14 -0
- package/metadata/commands.d.mts +46 -0
- package/metadata/commands.mjs +133 -0
- package/package.json +80 -0
- package/prompts/audit.md +17 -0
- package/prompts/autoresearch.md +66 -0
- package/prompts/compare.md +18 -0
- package/prompts/deepresearch.md +189 -0
- package/prompts/draft.md +19 -0
- package/prompts/jobs.md +16 -0
- package/prompts/litreview.md +18 -0
- package/prompts/log.md +14 -0
- package/prompts/replicate.md +24 -0
- package/prompts/review.md +18 -0
- package/prompts/watch.md +16 -0
- package/scripts/build-native-bundle.mjs +349 -0
- package/scripts/check-node-version.mjs +35 -0
- package/scripts/patch-embedded-pi.mjs +588 -0
- package/scripts/prepare-runtime-workspace.mjs +162 -0
- package/scripts/prune-runtime-deps.mjs +131 -0
- package/scripts/release.sh +152 -0
- package/skills/adaptyv/SKILL.md +112 -0
- package/skills/adaptyv/reference/api_reference.md +308 -0
- package/skills/adaptyv/reference/examples.md +913 -0
- package/skills/adaptyv/reference/experiments.md +360 -0
- package/skills/adaptyv/reference/protein_optimization.md +637 -0
- package/skills/aeon/SKILL.md +372 -0
- package/skills/aeon/references/anomaly_detection.md +154 -0
- package/skills/aeon/references/classification.md +144 -0
- package/skills/aeon/references/clustering.md +123 -0
- package/skills/aeon/references/datasets_benchmarking.md +387 -0
- package/skills/aeon/references/distances.md +256 -0
- package/skills/aeon/references/forecasting.md +140 -0
- package/skills/aeon/references/networks.md +289 -0
- package/skills/aeon/references/regression.md +118 -0
- package/skills/aeon/references/segmentation.md +163 -0
- package/skills/aeon/references/similarity_search.md +187 -0
- package/skills/aeon/references/transformations.md +246 -0
- package/skills/alpha-research/SKILL.md +42 -0
- package/skills/alpha-vantage/SKILL.md +142 -0
- package/skills/alpha-vantage/references/commodities.md +153 -0
- package/skills/alpha-vantage/references/economic-indicators.md +158 -0
- package/skills/alpha-vantage/references/forex-crypto.md +154 -0
- package/skills/alpha-vantage/references/fundamentals.md +223 -0
- package/skills/alpha-vantage/references/intelligence.md +138 -0
- package/skills/alpha-vantage/references/options.md +93 -0
- package/skills/alpha-vantage/references/technical-indicators.md +374 -0
- package/skills/alpha-vantage/references/time-series.md +157 -0
- package/skills/alphafold-database/SKILL.md +511 -0
- package/skills/alphafold-database/references/api_reference.md +423 -0
- package/skills/anndata/SKILL.md +398 -0
- package/skills/anndata/references/best_practices.md +525 -0
- package/skills/anndata/references/concatenation.md +396 -0
- package/skills/anndata/references/data_structure.md +314 -0
- package/skills/anndata/references/io_operations.md +404 -0
- package/skills/anndata/references/manipulation.md +516 -0
- package/skills/arboreto/SKILL.md +241 -0
- package/skills/arboreto/references/algorithms.md +138 -0
- package/skills/arboreto/references/basic_inference.md +151 -0
- package/skills/arboreto/references/distributed_computing.md +242 -0
- package/skills/arboreto/scripts/basic_grn_inference.py +97 -0
- package/skills/arxiv-database/SKILL.md +362 -0
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- package/skills/arxiv-database/scripts/arxiv_search.py +414 -0
- package/skills/astropy/SKILL.md +329 -0
- package/skills/astropy/references/coordinates.md +273 -0
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- package/skills/autoresearch/SKILL.md +12 -0
- package/skills/benchling-integration/SKILL.md +478 -0
- package/skills/benchling-integration/references/api_endpoints.md +883 -0
- package/skills/benchling-integration/references/authentication.md +379 -0
- package/skills/benchling-integration/references/sdk_reference.md +774 -0
- package/skills/bgpt-paper-search/SKILL.md +81 -0
- package/skills/bindingdb-database/SKILL.md +332 -0
- package/skills/bindingdb-database/references/affinity_queries.md +178 -0
- package/skills/biopython/SKILL.md +441 -0
- package/skills/biopython/references/advanced.md +577 -0
- package/skills/biopython/references/alignment.md +362 -0
- package/skills/biopython/references/blast.md +455 -0
- package/skills/biopython/references/databases.md +484 -0
- package/skills/biopython/references/phylogenetics.md +566 -0
- package/skills/biopython/references/sequence_io.md +285 -0
- package/skills/biopython/references/structure.md +564 -0
- package/skills/biorxiv-database/SKILL.md +481 -0
- package/skills/biorxiv-database/references/api_reference.md +280 -0
- package/skills/biorxiv-database/scripts/biorxiv_search.py +445 -0
- package/skills/bioservices/SKILL.md +359 -0
- package/skills/bioservices/references/identifier_mapping.md +685 -0
- package/skills/bioservices/references/services_reference.md +636 -0
- package/skills/bioservices/references/workflow_patterns.md +811 -0
- package/skills/bioservices/scripts/batch_id_converter.py +347 -0
- package/skills/bioservices/scripts/compound_cross_reference.py +378 -0
- package/skills/bioservices/scripts/pathway_analysis.py +309 -0
- package/skills/bioservices/scripts/protein_analysis_workflow.py +408 -0
- package/skills/brenda-database/SKILL.md +717 -0
- package/skills/brenda-database/references/api_reference.md +537 -0
- package/skills/brenda-database/scripts/brenda_queries.py +844 -0
- package/skills/brenda-database/scripts/brenda_visualization.py +772 -0
- package/skills/brenda-database/scripts/enzyme_pathway_builder.py +1053 -0
- package/skills/cbioportal-database/SKILL.md +367 -0
- package/skills/cbioportal-database/references/study_exploration.md +128 -0
- package/skills/cellxgene-census/SKILL.md +509 -0
- package/skills/cellxgene-census/references/census_schema.md +182 -0
- package/skills/cellxgene-census/references/common_patterns.md +351 -0
- package/skills/chembl-database/SKILL.md +387 -0
- package/skills/chembl-database/references/api_reference.md +272 -0
- package/skills/chembl-database/scripts/example_queries.py +278 -0
- package/skills/cirq/SKILL.md +344 -0
- package/skills/cirq/references/building.md +307 -0
- package/skills/cirq/references/experiments.md +572 -0
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- package/skills/cirq/references/transformation.md +416 -0
- package/skills/citation-management/SKILL.md +1113 -0
- package/skills/citation-management/assets/bibtex_template.bib +264 -0
- package/skills/citation-management/assets/citation_checklist.md +386 -0
- package/skills/citation-management/references/bibtex_formatting.md +908 -0
- package/skills/citation-management/references/citation_validation.md +794 -0
- package/skills/citation-management/references/google_scholar_search.md +725 -0
- package/skills/citation-management/references/metadata_extraction.md +870 -0
- package/skills/citation-management/references/pubmed_search.md +839 -0
- package/skills/citation-management/scripts/doi_to_bibtex.py +204 -0
- package/skills/citation-management/scripts/extract_metadata.py +569 -0
- package/skills/citation-management/scripts/format_bibtex.py +349 -0
- package/skills/citation-management/scripts/search_google_scholar.py +282 -0
- package/skills/citation-management/scripts/search_pubmed.py +398 -0
- package/skills/citation-management/scripts/validate_citations.py +497 -0
- package/skills/clinical-decision-support/SKILL.md +510 -0
- package/skills/clinical-decision-support/assets/biomarker_report_template.tex +380 -0
- package/skills/clinical-decision-support/assets/clinical_pathway_template.tex +222 -0
- package/skills/clinical-decision-support/assets/cohort_analysis_template.tex +359 -0
- package/skills/clinical-decision-support/assets/color_schemes.tex +149 -0
- package/skills/clinical-decision-support/assets/example_gbm_cohort.md +208 -0
- package/skills/clinical-decision-support/assets/recommendation_strength_guide.md +328 -0
- package/skills/clinical-decision-support/assets/treatment_recommendation_template.tex +529 -0
- package/skills/clinical-decision-support/references/README.md +129 -0
- package/skills/clinical-decision-support/references/biomarker_classification.md +719 -0
- package/skills/clinical-decision-support/references/clinical_decision_algorithms.md +604 -0
- package/skills/clinical-decision-support/references/evidence_synthesis.md +840 -0
- package/skills/clinical-decision-support/references/outcome_analysis.md +640 -0
- package/skills/clinical-decision-support/references/patient_cohort_analysis.md +427 -0
- package/skills/clinical-decision-support/references/treatment_recommendations.md +521 -0
- package/skills/clinical-decision-support/scripts/biomarker_classifier.py +384 -0
- package/skills/clinical-decision-support/scripts/build_decision_tree.py +447 -0
- package/skills/clinical-decision-support/scripts/create_cohort_tables.py +524 -0
- package/skills/clinical-decision-support/scripts/generate_survival_analysis.py +422 -0
- package/skills/clinical-decision-support/scripts/validate_cds_document.py +335 -0
- package/skills/clinical-reports/SKILL.md +1131 -0
- package/skills/clinical-reports/assets/case_report_template.md +352 -0
- package/skills/clinical-reports/assets/clinical_trial_csr_template.md +353 -0
- package/skills/clinical-reports/assets/clinical_trial_sae_template.md +359 -0
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- package/skills/clinical-reports/assets/pathology_report_template.md +249 -0
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- package/skills/clinical-reports/scripts/check_deidentification.py +346 -0
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- package/skills/clinical-reports/scripts/extract_clinical_data.py +102 -0
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- package/skills/clinical-reports/scripts/generate_report_template.py +163 -0
- package/skills/clinical-reports/scripts/terminology_validator.py +133 -0
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- package/skills/clinical-reports/scripts/validate_trial_report.py +89 -0
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- package/skills/clinicaltrials-database/scripts/query_clinicaltrials.py +215 -0
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#!/usr/bin/env python3
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"""
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TimesFM Covariates (XReg) Example
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Demonstrates the TimesFM covariate API using synthetic retail sales data.
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TimesFM 1.0 does NOT support forecast_with_covariates(); that requires
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TimesFM 2.5 + `pip install timesfm[xreg]`.
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This script:
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1. Generates synthetic 3-store weekly retail data (24-week context, 12-week horizon)
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2. Produces a 2x2 visualization showing WHAT each covariate contributes
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and WHY knowing them improves forecasts -- all panels share the same
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week x-axis (0 = first context week, 35 = last horizon week)
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3. Exports a compact CSV (108 rows) and metadata JSON
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NOTE ON REAL DATA:
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If you want to use a real retail dataset (e.g., Kaggle Rossmann Store Sales),
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download it to a TEMP location -- do NOT commit large CSVs to this repo.
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import tempfile, urllib.request
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tmp = tempfile.mkdtemp(prefix="timesfm_retail_")
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# urllib.request.urlretrieve("https://...store_sales.csv", f"{tmp}/store_sales.csv")
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# df = pd.read_csv(f"{tmp}/store_sales.csv")
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This skills directory intentionally keeps only tiny reference datasets.
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"""
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from __future__ import annotations
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import json
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import matplotlib
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matplotlib.use("Agg")
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import numpy as np
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import pandas as pd
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EXAMPLE_DIR = Path(__file__).parent
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OUTPUT_DIR = EXAMPLE_DIR / "output"
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N_STORES = 3
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CONTEXT_LEN = 24
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HORIZON_LEN = 12
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TOTAL_LEN = CONTEXT_LEN + HORIZON_LEN # 36
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def generate_sales_data() -> dict:
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Returns a dict with:
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stores: {store_id: {sales, config}}
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covariates: {price, promotion, holiday, day_of_week, store_type, region}
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components: {store_id: {base, price_effect, promo_effect, holiday_effect}}
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Components let us show 'what would sales look like without covariates?' --
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BUG FIX v3: Previous versions had variable-shadowing where inner dict
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stores = {
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"store_A": {"type": "premium", "region": "urban", "base_sales": 1000},
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"store_B": {"type": "standard", "region": "suburban", "base_sales": 750},
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"store_C": {"type": "discount", "region": "rural", "base_sales": 500},
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base_prices = {"store_A": 12.0, "store_B": 10.0, "store_C": 7.5}
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data: dict = {"stores": {}, "covariates": {}, "components": {}}
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prices_by_store: dict[str, np.ndarray] = {}
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holidays_by_store: dict[str, np.ndarray] = {}
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price = (bp + rng.uniform(-0.5, 0.5, TOTAL_LEN)).astype(np.float32)
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promotion = rng.choice([0.0, 1.0], TOTAL_LEN, p=[0.8, 0.2]).astype(np.float32)
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promo_effect = (150 * promotion).astype(np.float32)
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return data
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def create_visualization(data: dict) -> None:
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(1,0) Price covariate for all stores -- full 36 weeks including horizon
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(1,1) Covariate effect decomposition for Store A (stacked fill_between)
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store_colors = {"store_A": "#1a56db", "store_B": "#057a55", "store_C": "#c03221"}
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"TimesFM Covariates (XReg) -- Retail Sales with Exogenous Variables\n"
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def add_divider(ax, label_top=True):
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164
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+
ax.axvline(CONTEXT_LEN - 0.5, color="#9ca3af", lw=1.3, ls="--", alpha=0.8)
|
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165
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+
ax.axvspan(
|
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166
|
+
CONTEXT_LEN - 0.5, TOTAL_LEN - 0.5, alpha=0.06, color="grey", zorder=0
|
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+
)
|
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+
if label_top:
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+
ax.text(
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+
CONTEXT_LEN + 0.3,
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+
1.01,
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172
|
+
"<- horizon ->",
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+
transform=ax.get_xaxis_transform(),
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+
fontsize=7.5,
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+
color="#6b7280",
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+
style="italic",
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+
)
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+
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+
# -- (0,0): Sales by Store ---------------------------------------------------
|
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+
ax = axes[0, 0]
|
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181
|
+
base_price_labels = {"store_A": "$12", "store_B": "$10", "store_C": "$7.50"}
|
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182
|
+
for sid, store_data in data["stores"].items():
|
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+
sales = store_data["sales"]
|
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|
+
c = store_colors[sid]
|
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185
|
+
lbl = f"{sid} ({store_data['config']['type']}, {base_price_labels[sid]} base)"
|
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|
+
ax.plot(
|
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187
|
+
weeks[:CONTEXT_LEN],
|
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|
+
sales[:CONTEXT_LEN],
|
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|
+
color=c,
|
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|
+
lw=2,
|
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|
+
marker="o",
|
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|
+
ms=3,
|
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+
label=lbl,
|
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+
)
|
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+
ax.plot(
|
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|
+
weeks[CONTEXT_LEN:],
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|
+
sales[CONTEXT_LEN:],
|
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+
color=c,
|
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+
lw=1.5,
|
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+
ls="--",
|
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|
+
marker="o",
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|
+
ms=3,
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+
alpha=0.6,
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+
)
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+
add_divider(ax)
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|
+
ax.set_ylabel("Weekly Sales (units)", fontsize=10)
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|
+
ax.set_title("Sales by Store", fontsize=11, fontweight="bold")
|
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|
+
ax.legend(fontsize=7.5, loc="upper left")
|
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|
+
ax.grid(True, alpha=0.22)
|
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|
+
ratio = (
|
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|
+
data["stores"]["store_A"]["sales"][:CONTEXT_LEN].mean()
|
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|
+
/ data["stores"]["store_C"]["sales"][:CONTEXT_LEN].mean()
|
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|
+
)
|
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|
+
ax.annotate(
|
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|
+
f"Store A earns {ratio:.1f}x Store C\n(premium vs discount pricing)\n"
|
|
216
|
+
f"-> store_type is a useful static covariate",
|
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|
+
xy=(0.97, 0.05),
|
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|
+
xycoords="axes fraction",
|
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|
+
ha="right",
|
|
220
|
+
fontsize=8,
|
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|
+
bbox=dict(boxstyle="round", fc="#fffbe6", ec="#d4a017", alpha=0.95),
|
|
222
|
+
)
|
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223
|
+
|
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224
|
+
# -- (0,1): Store A actual vs baseline ---------------------------------------
|
|
225
|
+
ax = axes[0, 1]
|
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226
|
+
comp_A = data["components"]["store_A"]
|
|
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|
+
sales_A = data["stores"]["store_A"]["sales"]
|
|
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|
+
base_A = comp_A["base"]
|
|
229
|
+
promo_A = data["covariates"]["promotion"]["store_A"]
|
|
230
|
+
holiday_A = data["covariates"]["holiday"]["store_A"]
|
|
231
|
+
|
|
232
|
+
ax.plot(
|
|
233
|
+
weeks[:CONTEXT_LEN],
|
|
234
|
+
base_A[:CONTEXT_LEN],
|
|
235
|
+
color="#9ca3af",
|
|
236
|
+
lw=1.8,
|
|
237
|
+
ls="--",
|
|
238
|
+
label="Baseline (no covariates)",
|
|
239
|
+
)
|
|
240
|
+
ax.fill_between(
|
|
241
|
+
weeks[:CONTEXT_LEN],
|
|
242
|
+
base_A[:CONTEXT_LEN],
|
|
243
|
+
sales_A[:CONTEXT_LEN],
|
|
244
|
+
where=(sales_A[:CONTEXT_LEN] > base_A[:CONTEXT_LEN]),
|
|
245
|
+
alpha=0.35,
|
|
246
|
+
color="#22c55e",
|
|
247
|
+
label="Covariate uplift",
|
|
248
|
+
)
|
|
249
|
+
ax.fill_between(
|
|
250
|
+
weeks[:CONTEXT_LEN],
|
|
251
|
+
sales_A[:CONTEXT_LEN],
|
|
252
|
+
base_A[:CONTEXT_LEN],
|
|
253
|
+
where=(sales_A[:CONTEXT_LEN] < base_A[:CONTEXT_LEN]),
|
|
254
|
+
alpha=0.30,
|
|
255
|
+
color="#ef4444",
|
|
256
|
+
label="Price suppression",
|
|
257
|
+
)
|
|
258
|
+
ax.plot(
|
|
259
|
+
weeks[:CONTEXT_LEN],
|
|
260
|
+
sales_A[:CONTEXT_LEN],
|
|
261
|
+
color=store_colors["store_A"],
|
|
262
|
+
lw=2,
|
|
263
|
+
label="Actual sales (Store A)",
|
|
264
|
+
)
|
|
265
|
+
|
|
266
|
+
for w in range(CONTEXT_LEN):
|
|
267
|
+
if holiday_A[w] > 0:
|
|
268
|
+
ax.axvspan(w - 0.45, w + 0.45, alpha=0.22, color="darkorange", zorder=0)
|
|
269
|
+
promo_weeks = [w for w in range(CONTEXT_LEN) if promo_A[w] > 0]
|
|
270
|
+
if promo_weeks:
|
|
271
|
+
ax.scatter(
|
|
272
|
+
promo_weeks,
|
|
273
|
+
sales_A[promo_weeks],
|
|
274
|
+
marker="^",
|
|
275
|
+
color="#16a34a",
|
|
276
|
+
s=70,
|
|
277
|
+
zorder=6,
|
|
278
|
+
label="Promotion week",
|
|
279
|
+
)
|
|
280
|
+
|
|
281
|
+
add_divider(ax)
|
|
282
|
+
ax.set_ylabel("Weekly Sales (units)", fontsize=10)
|
|
283
|
+
ax.set_title(
|
|
284
|
+
"Store A -- Actual vs Baseline (No Covariates)", fontsize=11, fontweight="bold"
|
|
285
|
+
)
|
|
286
|
+
ax.legend(fontsize=7.5, loc="upper left", ncol=2)
|
|
287
|
+
ax.grid(True, alpha=0.22)
|
|
288
|
+
|
|
289
|
+
hm = holiday_A[:CONTEXT_LEN] > 0
|
|
290
|
+
pm = promo_A[:CONTEXT_LEN] > 0
|
|
291
|
+
h_lift = (
|
|
292
|
+
(sales_A[:CONTEXT_LEN][hm] - base_A[:CONTEXT_LEN][hm]).mean() if hm.any() else 0
|
|
293
|
+
)
|
|
294
|
+
p_lift = (
|
|
295
|
+
(sales_A[:CONTEXT_LEN][pm] - base_A[:CONTEXT_LEN][pm]).mean() if pm.any() else 0
|
|
296
|
+
)
|
|
297
|
+
ax.annotate(
|
|
298
|
+
f"Holiday weeks: +{h_lift:.0f} units avg\n"
|
|
299
|
+
f"Promotion weeks: +{p_lift:.0f} units avg\n"
|
|
300
|
+
f"Future event schedules must be known for XReg",
|
|
301
|
+
xy=(0.97, 0.05),
|
|
302
|
+
xycoords="axes fraction",
|
|
303
|
+
ha="right",
|
|
304
|
+
fontsize=8,
|
|
305
|
+
bbox=dict(boxstyle="round", fc="#fffbe6", ec="#d4a017", alpha=0.95),
|
|
306
|
+
)
|
|
307
|
+
|
|
308
|
+
# -- (1,0): Price covariate -- full 36 weeks ---------------------------------
|
|
309
|
+
ax = axes[1, 0]
|
|
310
|
+
for sid in data["stores"]:
|
|
311
|
+
ax.plot(
|
|
312
|
+
weeks,
|
|
313
|
+
data["covariates"]["price"][sid],
|
|
314
|
+
color=store_colors[sid],
|
|
315
|
+
lw=2,
|
|
316
|
+
label=sid,
|
|
317
|
+
alpha=0.85,
|
|
318
|
+
)
|
|
319
|
+
add_divider(ax, label_top=False)
|
|
320
|
+
ax.set_xlabel("Week", fontsize=10)
|
|
321
|
+
ax.set_ylabel("Price ($)", fontsize=10)
|
|
322
|
+
ax.set_title(
|
|
323
|
+
"Price Covariate -- Context + Forecast Horizon", fontsize=11, fontweight="bold"
|
|
324
|
+
)
|
|
325
|
+
ax.legend(fontsize=8, loc="upper right")
|
|
326
|
+
ax.grid(True, alpha=0.22)
|
|
327
|
+
ax.annotate(
|
|
328
|
+
"Prices are planned -- known for forecast horizon\n"
|
|
329
|
+
"Price elasticity: -$1 increase -> -20 units sold\n"
|
|
330
|
+
"Store A ($12) consistently more expensive than C ($7.50)",
|
|
331
|
+
xy=(0.97, 0.05),
|
|
332
|
+
xycoords="axes fraction",
|
|
333
|
+
ha="right",
|
|
334
|
+
fontsize=8,
|
|
335
|
+
bbox=dict(boxstyle="round", fc="#fffbe6", ec="#d4a017", alpha=0.95),
|
|
336
|
+
)
|
|
337
|
+
|
|
338
|
+
# -- (1,1): Covariate effect decomposition -----------------------------------
|
|
339
|
+
ax = axes[1, 1]
|
|
340
|
+
pe = comp_A["price_effect"]
|
|
341
|
+
pre = comp_A["promo_effect"]
|
|
342
|
+
he = comp_A["holiday_effect"]
|
|
343
|
+
|
|
344
|
+
ax.fill_between(
|
|
345
|
+
weeks,
|
|
346
|
+
0,
|
|
347
|
+
pe,
|
|
348
|
+
alpha=0.65,
|
|
349
|
+
color="steelblue",
|
|
350
|
+
step="mid",
|
|
351
|
+
label=f"Price effect (max +/-{np.abs(pe).max():.0f} units)",
|
|
352
|
+
)
|
|
353
|
+
ax.fill_between(
|
|
354
|
+
weeks,
|
|
355
|
+
pe,
|
|
356
|
+
pe + pre,
|
|
357
|
+
alpha=0.70,
|
|
358
|
+
color="#22c55e",
|
|
359
|
+
step="mid",
|
|
360
|
+
label="Promotion effect (+150 units)",
|
|
361
|
+
)
|
|
362
|
+
ax.fill_between(
|
|
363
|
+
weeks,
|
|
364
|
+
pe + pre,
|
|
365
|
+
pe + pre + he,
|
|
366
|
+
alpha=0.70,
|
|
367
|
+
color="darkorange",
|
|
368
|
+
step="mid",
|
|
369
|
+
label="Holiday effect (+200 units)",
|
|
370
|
+
)
|
|
371
|
+
total = pe + pre + he
|
|
372
|
+
ax.plot(weeks, total, "k-", lw=1.5, alpha=0.75, label="Total covariate effect")
|
|
373
|
+
ax.axhline(0, color="black", lw=0.9, alpha=0.6)
|
|
374
|
+
add_divider(ax, label_top=False)
|
|
375
|
+
ax.set_xlabel("Week", fontsize=10)
|
|
376
|
+
ax.set_ylabel("Effect on sales (units)", fontsize=10)
|
|
377
|
+
ax.set_title(
|
|
378
|
+
"Store A -- Covariate Effect Decomposition", fontsize=11, fontweight="bold"
|
|
379
|
+
)
|
|
380
|
+
ax.legend(fontsize=7.5, loc="upper right")
|
|
381
|
+
ax.grid(True, alpha=0.22, axis="y")
|
|
382
|
+
ax.annotate(
|
|
383
|
+
f"Holidays (+200) and promotions (+150) dominate\n"
|
|
384
|
+
f"Price effect (+/-{np.abs(pe).max():.0f} units) is minor by comparison\n"
|
|
385
|
+
f"-> Time-varying covariates explain most sales spikes",
|
|
386
|
+
xy=(0.97, 0.55),
|
|
387
|
+
xycoords="axes fraction",
|
|
388
|
+
ha="right",
|
|
389
|
+
fontsize=8,
|
|
390
|
+
bbox=dict(boxstyle="round", fc="#fffbe6", ec="#d4a017", alpha=0.95),
|
|
391
|
+
)
|
|
392
|
+
|
|
393
|
+
tick_pos = list(range(0, TOTAL_LEN, 4))
|
|
394
|
+
for row in [0, 1]:
|
|
395
|
+
for col in [0, 1]:
|
|
396
|
+
axes[row, col].set_xticks(tick_pos)
|
|
397
|
+
|
|
398
|
+
plt.tight_layout()
|
|
399
|
+
output_path = OUTPUT_DIR / "covariates_data.png"
|
|
400
|
+
plt.savefig(output_path, dpi=150, bbox_inches="tight")
|
|
401
|
+
plt.close()
|
|
402
|
+
print(f"\n Saved visualization: {output_path}")
|
|
403
|
+
|
|
404
|
+
|
|
405
|
+
def demonstrate_api() -> None:
|
|
406
|
+
print("\n" + "=" * 70)
|
|
407
|
+
print(" TIMESFM COVARIATES API (TimesFM 2.5)")
|
|
408
|
+
print("=" * 70)
|
|
409
|
+
print("""
|
|
410
|
+
# Installation
|
|
411
|
+
pip install timesfm[xreg]
|
|
412
|
+
|
|
413
|
+
import timesfm
|
|
414
|
+
hparams = timesfm.TimesFmHparams(backend="cpu", per_core_batch_size=32, horizon_len=12)
|
|
415
|
+
ckpt = timesfm.TimesFmCheckpoint(huggingface_repo_id="google/timesfm-2.5-200m-pytorch")
|
|
416
|
+
model = timesfm.TimesFm(hparams=hparams, checkpoint=ckpt)
|
|
417
|
+
|
|
418
|
+
point_fc, quant_fc = model.forecast_with_covariates(
|
|
419
|
+
inputs=[sales_a, sales_b, sales_c],
|
|
420
|
+
dynamic_numerical_covariates={"price": [price_a, price_b, price_c]},
|
|
421
|
+
dynamic_categorical_covariates={"holiday": [hol_a, hol_b, hol_c]},
|
|
422
|
+
static_categorical_covariates={"store_type": ["premium","standard","discount"]},
|
|
423
|
+
xreg_mode="xreg + timesfm",
|
|
424
|
+
normalize_xreg_target_per_input=True,
|
|
425
|
+
)
|
|
426
|
+
# point_fc: (num_series, horizon_len)
|
|
427
|
+
# quant_fc: (num_series, horizon_len, 10)
|
|
428
|
+
""")
|
|
429
|
+
|
|
430
|
+
|
|
431
|
+
def explain_xreg_modes() -> None:
|
|
432
|
+
print("\n" + "=" * 70)
|
|
433
|
+
print(" XREG MODES")
|
|
434
|
+
print("=" * 70)
|
|
435
|
+
print("""
|
|
436
|
+
"xreg + timesfm" (DEFAULT)
|
|
437
|
+
1. TimesFM makes baseline forecast
|
|
438
|
+
2. Fit regression on residuals (actual - baseline) ~ covariates
|
|
439
|
+
3. Final = TimesFM baseline + XReg adjustment
|
|
440
|
+
Best when: covariates explain residual variation (e.g. promotions)
|
|
441
|
+
|
|
442
|
+
"timesfm + xreg"
|
|
443
|
+
1. Fit regression: target ~ covariates
|
|
444
|
+
2. TimesFM forecasts the residuals
|
|
445
|
+
3. Final = XReg prediction + TimesFM residual forecast
|
|
446
|
+
Best when: covariates explain the main signal (e.g. temperature)
|
|
447
|
+
""")
|
|
448
|
+
|
|
449
|
+
|
|
450
|
+
def main() -> None:
|
|
451
|
+
print("=" * 70)
|
|
452
|
+
print(" TIMESFM COVARIATES (XREG) EXAMPLE")
|
|
453
|
+
print("=" * 70)
|
|
454
|
+
|
|
455
|
+
print("\n Generating synthetic retail sales data...")
|
|
456
|
+
data = generate_sales_data()
|
|
457
|
+
|
|
458
|
+
print(f" Stores: {list(data['stores'].keys())}")
|
|
459
|
+
print(f" Context length: {CONTEXT_LEN} weeks")
|
|
460
|
+
print(f" Horizon length: {HORIZON_LEN} weeks")
|
|
461
|
+
print(f" Covariates: {list(data['covariates'].keys())}")
|
|
462
|
+
|
|
463
|
+
demonstrate_api()
|
|
464
|
+
explain_xreg_modes()
|
|
465
|
+
|
|
466
|
+
print("\n Creating 2x2 visualization (shared x-axis)...")
|
|
467
|
+
create_visualization(data)
|
|
468
|
+
|
|
469
|
+
print("\n Saving output data...")
|
|
470
|
+
OUTPUT_DIR.mkdir(exist_ok=True)
|
|
471
|
+
|
|
472
|
+
records = []
|
|
473
|
+
for store_id, store_data in data["stores"].items():
|
|
474
|
+
for i in range(TOTAL_LEN):
|
|
475
|
+
records.append(
|
|
476
|
+
{
|
|
477
|
+
"store_id": store_id,
|
|
478
|
+
"week": i,
|
|
479
|
+
"split": "context" if i < CONTEXT_LEN else "horizon",
|
|
480
|
+
"sales": round(float(store_data["sales"][i]), 2),
|
|
481
|
+
"base_sales": round(
|
|
482
|
+
float(data["components"][store_id]["base"][i]), 2
|
|
483
|
+
),
|
|
484
|
+
"price": round(float(data["covariates"]["price"][store_id][i]), 4),
|
|
485
|
+
"price_effect": round(
|
|
486
|
+
float(data["components"][store_id]["price_effect"][i]), 2
|
|
487
|
+
),
|
|
488
|
+
"promotion": int(data["covariates"]["promotion"][store_id][i]),
|
|
489
|
+
"holiday": int(data["covariates"]["holiday"][store_id][i]),
|
|
490
|
+
"day_of_week": int(data["covariates"]["day_of_week"][store_id][i]),
|
|
491
|
+
"store_type": data["covariates"]["store_type"][store_id],
|
|
492
|
+
"region": data["covariates"]["region"][store_id],
|
|
493
|
+
}
|
|
494
|
+
)
|
|
495
|
+
|
|
496
|
+
df = pd.DataFrame(records)
|
|
497
|
+
csv_path = OUTPUT_DIR / "sales_with_covariates.csv"
|
|
498
|
+
df.to_csv(csv_path, index=False)
|
|
499
|
+
print(f" Saved: {csv_path} ({len(df)} rows x {len(df.columns)} cols)")
|
|
500
|
+
|
|
501
|
+
metadata = {
|
|
502
|
+
"description": "Synthetic retail sales data with covariates for TimesFM XReg demo",
|
|
503
|
+
"note_on_real_data": (
|
|
504
|
+
"For real datasets (e.g., Kaggle Rossmann Store Sales), download to "
|
|
505
|
+
"tempfile.mkdtemp() -- do NOT commit to this repo."
|
|
506
|
+
),
|
|
507
|
+
"stores": {
|
|
508
|
+
sid: {
|
|
509
|
+
**sdata["config"],
|
|
510
|
+
"mean_sales_context": round(
|
|
511
|
+
float(sdata["sales"][:CONTEXT_LEN].mean()), 1
|
|
512
|
+
),
|
|
513
|
+
}
|
|
514
|
+
for sid, sdata in data["stores"].items()
|
|
515
|
+
},
|
|
516
|
+
"dimensions": {
|
|
517
|
+
"context_length": CONTEXT_LEN,
|
|
518
|
+
"horizon_length": HORIZON_LEN,
|
|
519
|
+
"total_length": TOTAL_LEN,
|
|
520
|
+
"num_stores": N_STORES,
|
|
521
|
+
"csv_rows": len(df),
|
|
522
|
+
},
|
|
523
|
+
"covariates": {
|
|
524
|
+
"dynamic_numerical": ["price"],
|
|
525
|
+
"dynamic_categorical": ["promotion", "holiday", "day_of_week"],
|
|
526
|
+
"static_categorical": ["store_type", "region"],
|
|
527
|
+
},
|
|
528
|
+
"effect_magnitudes": {
|
|
529
|
+
"holiday": "+200 units per holiday week",
|
|
530
|
+
"promotion": "+150 units per promotion week",
|
|
531
|
+
"price": "-20 units per $1 above base price",
|
|
532
|
+
},
|
|
533
|
+
"xreg_modes": {
|
|
534
|
+
"xreg + timesfm": "Regression on TimesFM residuals (default)",
|
|
535
|
+
"timesfm + xreg": "TimesFM on regression residuals",
|
|
536
|
+
},
|
|
537
|
+
"bug_fixes_history": [
|
|
538
|
+
"v1: Variable-shadowing -- all stores had identical covariates",
|
|
539
|
+
"v2: Fixed shadowing; CONTEXT_LEN 48->24",
|
|
540
|
+
"v3: Added component decomposition (base, price/promo/holiday effects); 2x2 sharex viz",
|
|
541
|
+
],
|
|
542
|
+
}
|
|
543
|
+
|
|
544
|
+
meta_path = OUTPUT_DIR / "covariates_metadata.json"
|
|
545
|
+
with open(meta_path, "w") as f:
|
|
546
|
+
json.dump(metadata, f, indent=2)
|
|
547
|
+
print(f" Saved: {meta_path}")
|
|
548
|
+
|
|
549
|
+
print("\n" + "=" * 70)
|
|
550
|
+
print(" COVARIATES EXAMPLE COMPLETE")
|
|
551
|
+
print("=" * 70)
|
|
552
|
+
print("""
|
|
553
|
+
Key points:
|
|
554
|
+
1. Requires timesfm[xreg] + TimesFM 2.5+ for actual inference
|
|
555
|
+
2. Dynamic covariates need values for BOTH context AND horizon (future must be known!)
|
|
556
|
+
3. Static covariates: one value per series (store_type, region)
|
|
557
|
+
4. All 4 visualization panels share the same week x-axis (0-35)
|
|
558
|
+
5. Effect decomposition shows holidays/promotions dominate over price variation
|
|
559
|
+
|
|
560
|
+
Output files:
|
|
561
|
+
output/covariates_data.png -- 2x2 visualization with conclusions
|
|
562
|
+
output/sales_with_covariates.csv -- 108-row compact dataset
|
|
563
|
+
output/covariates_metadata.json -- metadata + effect magnitudes
|
|
564
|
+
""")
|
|
565
|
+
|
|
566
|
+
|
|
567
|
+
if __name__ == "__main__":
|
|
568
|
+
main()
|
|
Binary file
|
package/skills/timesfm-forecasting/examples/covariates-forecasting/output/covariates_metadata.json
ADDED
|
@@ -0,0 +1,59 @@
|
|
|
1
|
+
{
|
|
2
|
+
"description": "Synthetic retail sales data with covariates for TimesFM XReg demo",
|
|
3
|
+
"note_on_real_data": "For real datasets (e.g., Kaggle Rossmann Store Sales), download to tempfile.mkdtemp() -- do NOT commit to this repo.",
|
|
4
|
+
"stores": {
|
|
5
|
+
"store_A": {
|
|
6
|
+
"type": "premium",
|
|
7
|
+
"region": "urban",
|
|
8
|
+
"base_sales": 1000,
|
|
9
|
+
"mean_sales_context": 1148.7
|
|
10
|
+
},
|
|
11
|
+
"store_B": {
|
|
12
|
+
"type": "standard",
|
|
13
|
+
"region": "suburban",
|
|
14
|
+
"base_sales": 750,
|
|
15
|
+
"mean_sales_context": 907.0
|
|
16
|
+
},
|
|
17
|
+
"store_C": {
|
|
18
|
+
"type": "discount",
|
|
19
|
+
"region": "rural",
|
|
20
|
+
"base_sales": 500,
|
|
21
|
+
"mean_sales_context": 645.3
|
|
22
|
+
}
|
|
23
|
+
},
|
|
24
|
+
"dimensions": {
|
|
25
|
+
"context_length": 24,
|
|
26
|
+
"horizon_length": 12,
|
|
27
|
+
"total_length": 36,
|
|
28
|
+
"num_stores": 3,
|
|
29
|
+
"csv_rows": 108
|
|
30
|
+
},
|
|
31
|
+
"covariates": {
|
|
32
|
+
"dynamic_numerical": [
|
|
33
|
+
"price"
|
|
34
|
+
],
|
|
35
|
+
"dynamic_categorical": [
|
|
36
|
+
"promotion",
|
|
37
|
+
"holiday",
|
|
38
|
+
"day_of_week"
|
|
39
|
+
],
|
|
40
|
+
"static_categorical": [
|
|
41
|
+
"store_type",
|
|
42
|
+
"region"
|
|
43
|
+
]
|
|
44
|
+
},
|
|
45
|
+
"effect_magnitudes": {
|
|
46
|
+
"holiday": "+200 units per holiday week",
|
|
47
|
+
"promotion": "+150 units per promotion week",
|
|
48
|
+
"price": "-20 units per $1 above base price"
|
|
49
|
+
},
|
|
50
|
+
"xreg_modes": {
|
|
51
|
+
"xreg + timesfm": "Regression on TimesFM residuals (default)",
|
|
52
|
+
"timesfm + xreg": "TimesFM on regression residuals"
|
|
53
|
+
},
|
|
54
|
+
"bug_fixes_history": [
|
|
55
|
+
"v1: Variable-shadowing -- all stores had identical covariates",
|
|
56
|
+
"v2: Fixed shadowing; CONTEXT_LEN 48->24",
|
|
57
|
+
"v3: Added component decomposition (base, price/promo/holiday effects); 2x2 sharex viz"
|
|
58
|
+
]
|
|
59
|
+
}
|