@jbrowse/plugin-wiggle 2.0.1 → 2.1.0

package/dist/DensityRenderer/index.js

@@ -1,156 +1,19 @@
 "use strict";
-var __extends = (this && this.__extends) || (function () {
-    var extendStatics = function (d, b) {
-        extendStatics = Object.setPrototypeOf ||
-            ({ __proto__: [] } instanceof Array && function (d, b) { d.__proto__ = b; }) ||
-            function (d, b) { for (var p in b) if (Object.prototype.hasOwnProperty.call(b, p)) d[p] = b[p]; };
-        return extendStatics(d, b);
-    };
-    return function (d, b) {
-        if (typeof b !== "function" && b !== null)
-            throw new TypeError("Class extends value " + String(b) + " is not a constructor or null");
-        extendStatics(d, b);
-        function __() { this.constructor = d; }
-        d.prototype = b === null ? Object.create(b) : (__.prototype = b.prototype, new __());
-    };
-})();
-var __assign = (this && this.__assign) || function () {
-    __assign = Object.assign || function(t) {
-        for (var s, i = 1, n = arguments.length; i < n; i++) {
-            s = arguments[i];
-            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
-                t[p] = s[p];
-        }
-        return t;
-    };
-    return __assign.apply(this, arguments);
-};
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-var __generator = (this && this.__generator) || function (thisArg, body) {
-    var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
-    return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
-    function verb(n) { return function (v) { return step([n, v]); }; }
-    function step(op) {
-        if (f) throw new TypeError("Generator is already executing.");
-        while (_) try {
-            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
-            if (y = 0, t) op = [op[0] & 2, t.value];
-            switch (op[0]) {
-                case 0: case 1: t = op; break;
-                case 4: _.label++; return { value: op[1], done: false };
-                case 5: _.label++; y = op[1]; op = [0]; continue;
-                case 7: op = _.ops.pop(); _.trys.pop(); continue;
-                default:
-                    if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) { _ = 0; continue; }
-                    if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
-                    if (op[0] === 6 && _.label < t[1]) { _.label = t[1]; t = op; break; }
-                    if (t && _.label < t[2]) { _.label = t[2]; _.ops.push(op); break; }
-                    if (t[2]) _.ops.pop();
-                    _.trys.pop(); continue;
-            }
-            op = body.call(thisArg, _);
-        } catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
-        if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
-    }
-};
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
-var __values = (this && this.__values) || function(o) {
-    var s = typeof Symbol === "function" && Symbol.iterator, m = s && o[s], i = 0;
-    if (m) return m.call(o);
-    if (o && typeof o.length === "number") return {
-        next: function () {
-            if (o && i >= o.length) o = void 0;
-            return { value: o && o[i++], done: !o };
-        }
-    };
-    throw new TypeError(s ? "Object is not iterable." : "Symbol.iterator is not defined.");
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.configSchema = exports.ReactComponent = void 0;
-var configuration_1 = require("@jbrowse/core/configuration");
-var util_1 = require("@jbrowse/core/util");
-var util_2 = require("../util");
-var configSchema_1 = __importDefault(require("../configSchema"));
-var WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
-var WiggleRendering_1 = require("../WiggleRendering");
-Object.defineProperty(exports, "ReactComponent", { enumerable: true, get: function () { return __importDefault(WiggleRendering_1).default; } });
-var DensityRenderer = /** @class */ (function (_super) {
-    __extends(DensityRenderer, _super);
-    function DensityRenderer() {
-        return _super !== null && _super.apply(this, arguments) || this;
-    }
-    DensityRenderer.prototype.draw = function (ctx, props) {
-        return __awaiter(this, void 0, void 0, function () {
-            var features, regions, bpPerPx, scaleOpts, height, config, _a, region, pivot, pivotValue, negColor, posColor, color, colorCallback, colorScale_1, _b, _c, feature, _d, leftPx, rightPx, w;
-            var e_1, _e;
-            return __generator(this, function (_f) {
-                features = props.features, regions = props.regions, bpPerPx = props.bpPerPx, scaleOpts = props.scaleOpts, height = props.height, config = props.config;
-                _a = __read(regions, 1), region = _a[0];
-                pivot = (0, configuration_1.readConfObject)(config, 'bicolorPivot');
-                pivotValue = (0, configuration_1.readConfObject)(config, 'bicolorPivotValue');
-                negColor = (0, configuration_1.readConfObject)(config, 'negColor');
-                posColor = (0, configuration_1.readConfObject)(config, 'posColor');
-                color = (0, configuration_1.readConfObject)(config, 'color');
-                if (color === '#f0f') {
-                    colorScale_1 = pivot !== 'none'
-                        ? (0, util_2.getScale)(__assign(__assign({}, scaleOpts), { pivotValue: pivotValue, range: [negColor, 'white', posColor] }))
-                        : (0, util_2.getScale)(__assign(__assign({}, scaleOpts), { range: ['white', posColor] }));
-                    colorCallback = function (feature) { return colorScale_1(feature.get('score')); };
-                }
-                else {
-                    colorCallback = function (feature) {
-                        return (0, configuration_1.readConfObject)(config, 'color', { feature: feature });
-                    };
-                }
-                try {
-                    for (_b = __values(features.values()), _c = _b.next(); !_c.done; _c = _b.next()) {
-                        feature = _c.value;
-                        _d = __read((0, util_1.featureSpanPx)(feature, region, bpPerPx), 2), leftPx = _d[0], rightPx = _d[1];
-                        w = rightPx - leftPx + 0.3 // fudge factor for subpixel rendering
-                        ;
-                        ctx.fillStyle = colorCallback(feature);
-                        ctx.fillRect(leftPx, 0, w, height);
-                    }
-                }
-                catch (e_1_1) { e_1 = { error: e_1_1 }; }
-                finally {
-                    try {
-                        if (_c && !_c.done && (_e = _b.return)) _e.call(_b);
-                    }
-                    finally { if (e_1) throw e_1.error; }
-                }
-                return [2 /*return*/];
-            });
+var configSchema_1 = __importDefault(require("./configSchema"));
+var DensityRenderer_1 = __importDefault(require("./DensityRenderer"));
+var WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
+exports.default = (function (pluginManager) {
+    pluginManager.addRendererType(function () {
+        return new DensityRenderer_1.default({
+            name: 'DensityRenderer',
+            ReactComponent: WiggleRendering_1.default,
+            configSchema: configSchema_1.default,
+            pluginManager: pluginManager,
         });
-    };
-    return DensityRenderer;
-}(WiggleBaseRenderer_1.default));
-exports.default = DensityRenderer;
-exports.configSchema = (0, configuration_1.ConfigurationSchema)('DensityRenderer', {}, { baseConfiguration: configSchema_1.default, explicitlyTyped: true });
+    });
+});
 //# sourceMappingURL=index.js.map

package/dist/DensityRenderer/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/DensityRenderer/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6DAGoC;AACpC,2CAAkD;AAElD,gCAAkC;AAElC,iEAA0C;AAC1C,6EAE8B;AAE9B,sDAA8D;AAArD,kIAAA,OAAO,OAAkB;AAElC;IAA6C,mCAAkB;IAA/D;;IAmCA,CAAC;IAlCO,8BAAI,GAAV,UACE,GAA6B,EAC7B,KAAyC;;;;;gBAEjC,QAAQ,GAAkD,KAAK,SAAvD,EAAE,OAAO,GAAyC,KAAK,QAA9C,EAAE,OAAO,GAAgC,KAAK,QAArC,EAAE,SAAS,GAAqB,KAAK,UAA1B,EAAE,MAAM,GAAa,KAAK,OAAlB,EAAE,MAAM,GAAK,KAAK,OAAV,CAAU;gBACjE,KAAA,OAAW,OAAO,IAAA,EAAjB,MAAM,QAAA,CAAW;gBAClB,KAAK,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,cAAc,CAAC,CAAA;gBAC9C,UAAU,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,mBAAmB,CAAC,CAAA;gBACxD,QAAQ,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,UAAU,CAAC,CAAA;gBAC7C,QAAQ,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,UAAU,CAAC,CAAA;gBAC7C,KAAK,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,OAAO,CAAC,CAAA;gBAE7C,IAAI,KAAK,KAAK,MAAM,EAAE;oBACd,eACJ,KAAK,KAAK,MAAM;wBACd,CAAC,CAAC,IAAA,eAAQ,wBACH,SAAS,KACZ,UAAU,YAAA,EACV,KAAK,EAAE,CAAC,QAAQ,EAAE,OAAO,EAAE,QAAQ,CAAC,IACpC;wBACJ,CAAC,CAAC,IAAA,eAAQ,wBAAM,SAAS,KAAE,KAAK,EAAE,CAAC,OAAO,EAAE,QAAQ,CAAC,IAAG,CAAA;oBAC5D,aAAa,GAAG,UAAC,OAAgB,IAAK,OAAA,YAAU,CAAC,OAAO,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,EAAhC,CAAgC,CAAA;iBACvE;qBAAM;oBACL,aAAa,GAAG,UAAC,OAAgB;wBAC/B,OAAA,IAAA,8BAAc,EAAC,MAAM,EAAE,OAAO,EAAE,EAAE,OAAO,SAAA,EAAE,CAAC;oBAA5C,CAA4C,CAAA;iBAC/C;;oBAED,KAAsB,KAAA,SAAA,QAAQ,CAAC,MAAM,EAAE,CAAA,4CAAE;wBAA9B,OAAO;wBACV,KAAA,OAAoB,IAAA,oBAAa,EAAC,OAAO,EAAE,MAAM,EAAE,OAAO,CAAC,IAAA,EAA1D,MAAM,QAAA,EAAE,OAAO,QAAA,CAA2C;wBAC3D,CAAC,GAAG,OAAO,GAAG,MAAM,GAAG,GAAG,CAAC,sCAAsC;wBAAvC,CAAA;wBAChC,GAAG,CAAC,SAAS,GAAG,aAAa,CAAC,OAAO,CAAC,CAAA;wBACtC,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,EAAE,MAAM,CAAC,CAAA;qBACnC;;;;;;;;;;;;KACF;IACH,sBAAC;AAAD,CAAC,AAnCD,CAA6C,4BAAkB,GAmC9D;;AACY,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAC7C,iBAAiB,EACjB,EAAE,EACF,EAAE,iBAAiB,EAAE,sBAAY,EAAE,eAAe,EAAE,IAAI,EAAE,CAC3D,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/DensityRenderer/index.ts"],"names":[],"mappings":";;;;;AAAA,gEAAyC;AAGzC,sEAA+C;AAC/C,uEAA+C;AAE/C,mBAAe,UAAC,aAA4B;IAC1C,aAAa,CAAC,eAAe,CAC3B;QACE,OAAA,IAAI,yBAAe,CAAC;YAClB,IAAI,EAAE,iBAAiB;YACvB,cAAc,2BAAA;YACd,YAAY,wBAAA;YACZ,aAAa,eAAA;SACd,CAAC;IALF,CAKE,CACL,CAAA;AACH,CAAC,EAAA"}

package/dist/LinePlotRenderer/LinePlotRenderer.d.ts

@@ -1,4 +1,6 @@
+import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
 export default class LinePlotRenderer extends WiggleBaseRenderer {
-    draw(ctx: any, props: any): Promise<void>;
+    draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<{
+        reducedFeatures: import("@jbrowse/core/util").Feature[];
+    }>;
 }
-import WiggleBaseRenderer from "../WiggleBaseRenderer";

package/dist/LinePlotRenderer/LinePlotRenderer.js

@@ -61,42 +61,13 @@ var __generator = (this && this.__generator) || function (thisArg, body) {
         if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
     }
 };
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
-var __values = (this && this.__values) || function(o) {
-    var s = typeof Symbol === "function" && Symbol.iterator, m = s && o[s], i = 0;
-    if (m) return m.call(o);
-    if (o && typeof o.length === "number") return {
-        next: function () {
-            if (o && i >= o.length) o = void 0;
-            return { value: o && o[i++], done: !o };
-        }
-    };
-    throw new TypeError(s ? "Object is not iterable." : "Symbol.iterator is not defined.");
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var configuration_1 = require("@jbrowse/core/configuration");
-var util_1 = require("@jbrowse/core/util");
-var util_2 = require("../util");
 var WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
-var model_1 = require("../LinearWiggleDisplay/models/model");
+var util_1 = require("../util");
+var drawxy_1 = require("../drawxy");
 var LinePlotRenderer = /** @class */ (function (_super) {
     __extends(LinePlotRenderer, _super);
     function LinePlotRenderer() {
@@ -104,78 +75,8 @@ var LinePlotRenderer = /** @class */ (function (_super) {
     }
     LinePlotRenderer.prototype.draw = function (ctx, props) {
         return __awaiter(this, void 0, void 0, function () {
-            var features, regions, bpPerPx, scaleOpts, unadjustedHeight, values, displayCrossHatches, config, _a, region, width, offset, height, clipColor, highlightColor, scale, _b, niceMin, niceMax, toY, colorCallback, lastVal, _c, _d, feature, _e, leftPx, rightPx, score, lowClipping, highClipping, w, c;
-            var e_1, _f;
-            return __generator(this, function (_g) {
-                features = props.features, regions = props.regions, bpPerPx = props.bpPerPx, scaleOpts = props.scaleOpts, unadjustedHeight = props.height, values = props.ticks.values, displayCrossHatches = props.displayCrossHatches, config = props.config;
-                _a = __read(regions, 1), region = _a[0];
-                width = (region.end - region.start) / bpPerPx;
-                offset = model_1.YSCALEBAR_LABEL_OFFSET;
-                height = unadjustedHeight - offset * 2;
-                clipColor = (0, configuration_1.readConfObject)(config, 'clipColor');
-                highlightColor = (0, configuration_1.readConfObject)(config, 'highlightColor');
-                scale = (0, util_2.getScale)(__assign(__assign({}, scaleOpts), { range: [0, height] }));
-                _b = __read(scale.domain(), 2), niceMin = _b[0], niceMax = _b[1];
-                toY = function (rawscore) { return height - scale(rawscore) + offset; };
-                colorCallback = (0, configuration_1.readConfObject)(config, 'color') === '#f0f'
-                    ? function () { return 'grey'; }
-                    : function (feature) { return (0, configuration_1.readConfObject)(config, 'color', { feature: feature }); };
-                try {
-                    for (_c = __values(features.values()), _d = _c.next(); !_d.done; _d = _c.next()) {
-                        feature = _d.value;
-                        _e = __read((0, util_1.featureSpanPx)(feature, region, bpPerPx), 2), leftPx = _e[0], rightPx = _e[1];
-                        score = feature.get('score');
-                        lowClipping = score < niceMin;
-                        highClipping = score > niceMax;
-                        w = rightPx - leftPx + 0.3 // fudge factor for subpixel rendering
-                        ;
-                        c = colorCallback(feature);
-                        ctx.strokeStyle = c;
-                        ctx.beginPath();
-                        if (!region.reversed) {
-                            ctx.moveTo(leftPx, toY(typeof lastVal !== 'undefined' ? lastVal : score));
-                            ctx.lineTo(leftPx, toY(score));
-                            ctx.lineTo(rightPx, toY(score));
-                        }
-                        else {
-                            ctx.moveTo(rightPx, toY(typeof lastVal !== 'undefined' ? lastVal : score));
-                            ctx.lineTo(rightPx, toY(score));
-                            ctx.lineTo(leftPx, toY(score));
-                        }
-                        ctx.stroke();
-                        lastVal = score;
-                        if (highClipping) {
-                            ctx.fillStyle = clipColor;
-                            ctx.fillRect(leftPx, 0, w, 4);
-                        }
-                        else if (lowClipping && scaleOpts.scaleType !== 'log') {
-                            ctx.fillStyle = clipColor;
-                            ctx.fillRect(leftPx, height - 4, w, height);
-                        }
-                        if (feature.get('highlighted')) {
-                            ctx.fillStyle = highlightColor;
-                            ctx.fillRect(leftPx, 0, w, height);
-                        }
-                    }
-                }
-                catch (e_1_1) { e_1 = { error: e_1_1 }; }
-                finally {
-                    try {
-                        if (_d && !_d.done && (_f = _c.return)) _f.call(_c);
-                    }
-                    finally { if (e_1) throw e_1.error; }
-                }
-                if (displayCrossHatches) {
-                    ctx.lineWidth = 1;
-                    ctx.strokeStyle = 'rgba(200,200,200,0.8)';
-                    values.forEach(function (tick) {
-                        ctx.beginPath();
-                        ctx.moveTo(0, Math.round(toY(tick)));
-                        ctx.lineTo(width, Math.round(toY(tick)));
-                        ctx.stroke();
-                    });
-                }
-                return [2 /*return*/];
+            return __generator(this, function (_a) {
+                return [2 /*return*/, (0, drawxy_1.drawLine)(ctx, __assign(__assign({}, props), { offset: util_1.YSCALEBAR_LABEL_OFFSET, colorCallback: function () { return 'grey'; } }))];
             });
         });
     };

package/dist/LinePlotRenderer/LinePlotRenderer.js.map

@@ -1 +1 @@
-{"version":3,"file":"LinePlotRenderer.js","sourceRoot":"","sources":["../../src/LinePlotRenderer/LinePlotRenderer.js"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6DAA4D;AAC5D,2CAAkD;AAClD,gCAAkC;AAClC,6EAAsD;AACtD,6DAA4E;AAE5E;IAA8C,oCAAkB;IAAhE;;IAoFA,CAAC;IAnFO,+BAAI,GAAV,UAAW,GAAG,EAAE,KAAK;;;;;gBAEjB,QAAQ,GAQN,KAAK,SARC,EACR,OAAO,GAOL,KAAK,QAPA,EACP,OAAO,GAML,KAAK,QANA,EACP,SAAS,GAKP,KAAK,UALE,EACD,gBAAgB,GAItB,KAAK,OAJiB,EACf,MAAM,GAGb,KAAK,aAHQ,EACf,mBAAmB,GAEjB,KAAK,oBAFY,EACnB,MAAM,GACJ,KAAK,OADD,CACC;gBACH,KAAA,OAAW,OAAO,IAAA,EAAjB,MAAM,QAAA,CAAW;gBAClB,KAAK,GAAG,CAAC,MAAM,CAAC,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,OAAO,CAAA;gBAC7C,MAAM,GAAG,8BAAsB,CAAA;gBAK/B,MAAM,GAAG,gBAAgB,GAAG,MAAM,GAAG,CAAC,CAAA;gBACtC,SAAS,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,WAAW,CAAC,CAAA;gBAC/C,cAAc,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,gBAAgB,CAAC,CAAA;gBACzD,KAAK,GAAG,IAAA,eAAQ,wBAAM,SAAS,KAAE,KAAK,EAAE,CAAC,CAAC,EAAE,MAAM,CAAC,IAAG,CAAA;gBACtD,KAAA,OAAqB,KAAK,CAAC,MAAM,EAAE,IAAA,EAAlC,OAAO,QAAA,EAAE,OAAO,QAAA,CAAkB;gBACnC,GAAG,GAAG,UAAA,QAAQ,IAAI,OAAA,MAAM,GAAG,KAAK,CAAC,QAAQ,CAAC,GAAG,MAAM,EAAjC,CAAiC,CAAA;gBACnD,aAAa,GACjB,IAAA,8BAAc,EAAC,MAAM,EAAE,OAAO,CAAC,KAAK,MAAM;oBACxC,CAAC,CAAC,cAAM,OAAA,MAAM,EAAN,CAAM;oBACd,CAAC,CAAC,UAAA,OAAO,IAAI,OAAA,IAAA,8BAAc,EAAC,MAAM,EAAE,OAAO,EAAE,EAAE,OAAO,SAAA,EAAE,CAAC,EAA5C,CAA4C,CAAA;;oBAG7D,KAAsB,KAAA,SAAA,QAAQ,CAAC,MAAM,EAAE,CAAA,4CAAE;wBAA9B,OAAO;wBACV,KAAA,OAAoB,IAAA,oBAAa,EAAC,OAAO,EAAE,MAAM,EAAE,OAAO,CAAC,IAAA,EAA1D,MAAM,QAAA,EAAE,OAAO,QAAA,CAA2C;wBAC3D,KAAK,GAAG,OAAO,CAAC,GAAG,CAAC,OAAO,CAAC,CAAA;wBAC5B,WAAW,GAAG,KAAK,GAAG,OAAO,CAAA;wBAC7B,YAAY,GAAG,KAAK,GAAG,OAAO,CAAA;wBAC9B,CAAC,GAAG,OAAO,GAAG,MAAM,GAAG,GAAG,CAAC,sCAAsC;wBAAvC,CAAA;wBAE1B,CAAC,GAAG,aAAa,CAAC,OAAO,CAAC,CAAA;wBAEhC,GAAG,CAAC,WAAW,GAAG,CAAC,CAAA;wBACnB,GAAG,CAAC,SAAS,EAAE,CAAA;wBACf,IAAI,CAAC,MAAM,CAAC,QAAQ,EAAE;4BACpB,GAAG,CAAC,MAAM,CACR,MAAM,EACN,GAAG,CAAC,OAAO,OAAO,KAAK,WAAW,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,CAAC,CACtD,CAAA;4BACD,GAAG,CAAC,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC,CAAA;4BAC9B,GAAG,CAAC,MAAM,CAAC,OAAO,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC,CAAA;yBAChC;6BAAM;4BACL,GAAG,CAAC,MAAM,CACR,OAAO,EACP,GAAG,CAAC,OAAO,OAAO,KAAK,WAAW,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,CAAC,CACtD,CAAA;4BACD,GAAG,CAAC,MAAM,CAAC,OAAO,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC,CAAA;4BAC/B,GAAG,CAAC,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC,CAAA;yBAC/B;wBACD,GAAG,CAAC,MAAM,EAAE,CAAA;wBACZ,OAAO,GAAG,KAAK,CAAA;wBAEf,IAAI,YAAY,EAAE;4BAChB,GAAG,CAAC,SAAS,GAAG,SAAS,CAAA;4BACzB,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAA;yBAC9B;6BAAM,IAAI,WAAW,IAAI,SAAS,CAAC,SAAS,KAAK,KAAK,EAAE;4BACvD,GAAG,CAAC,SAAS,GAAG,SAAS,CAAA;4BACzB,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAE,MAAM,GAAG,CAAC,EAAE,CAAC,EAAE,MAAM,CAAC,CAAA;yBAC5C;wBACD,IAAI,OAAO,CAAC,GAAG,CAAC,aAAa,CAAC,EAAE;4BAC9B,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;4BAC9B,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,EAAE,MAAM,CAAC,CAAA;yBACnC;qBACF;;;;;;;;;gBAED,IAAI,mBAAmB,EAAE;oBACvB,GAAG,CAAC,SAAS,GAAG,CAAC,CAAA;oBACjB,GAAG,CAAC,WAAW,GAAG,uBAAuB,CAAA;oBACzC,MAAM,CAAC,OAAO,CAAC,UAAA,IAAI;wBACjB,GAAG,CAAC,SAAS,EAAE,CAAA;wBACf,GAAG,CAAC,MAAM,CAAC,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;wBACpC,GAAG,CAAC,MAAM,CAAC,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;wBACxC,GAAG,CAAC,MAAM,EAAE,CAAA;oBACd,CAAC,CAAC,CAAA;iBACH;;;;KACF;IACH,uBAAC;AAAD,CAAC,AApFD,CAA8C,4BAAkB,GAoF/D"}
+{"version":3,"file":"LinePlotRenderer.js","sourceRoot":"","sources":["../../src/LinePlotRenderer/LinePlotRenderer.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6EAE8B;AAE9B,gCAAgD;AAChD,oCAAoC;AAEpC;IAA8C,oCAAkB;IAAhE;;IAWA,CAAC;IAVO,+BAAI,GAAV,UACE,GAA6B,EAC7B,KAAyC;;;gBAEzC,sBAAO,IAAA,iBAAQ,EAAC,GAAG,wBACd,KAAK,KACR,MAAM,EAAE,6BAAsB,EAC9B,aAAa,EAAE,cAAM,OAAA,MAAM,EAAN,CAAM,IAC3B,EAAA;;;KACH;IACH,uBAAC;AAAD,CAAC,AAXD,CAA8C,4BAAkB,GAW/D"}

package/dist/LinePlotRenderer/configSchema.d.ts

@@ -0,0 +1,2 @@
+declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+export default configSchema;

package/dist/LinePlotRenderer/configSchema.js

@@ -0,0 +1,16 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+var configuration_1 = require("@jbrowse/core/configuration");
+var configSchema_1 = __importDefault(require("../configSchema"));
+var configSchema = (0, configuration_1.ConfigurationSchema)('LinePlotRenderer', {
+    displayCrossHatches: {
+        type: 'boolean',
+        description: 'choose to draw cross hatches (sideways lines)',
+        defaultValue: false,
+    },
+}, { baseConfiguration: configSchema_1.default, explicitlyTyped: true });
+exports.default = configSchema;
+//# sourceMappingURL=configSchema.js.map

package/dist/LinePlotRenderer/configSchema.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/LinePlotRenderer/configSchema.ts"],"names":[],"mappings":";;;;;AAAA,6DAAiE;AACjE,iEAA0C;AAE1C,IAAM,YAAY,GAAG,IAAA,mCAAmB,EACtC,kBAAkB,EAClB;IACE,mBAAmB,EAAE;QACnB,IAAI,EAAE,SAAS;QACf,WAAW,EAAE,+CAA+C;QAC5D,YAAY,EAAE,KAAK;KACpB;CACF,EACD,EAAE,iBAAiB,EAAE,sBAAY,EAAE,eAAe,EAAE,IAAI,EAAE,CAC3D,CAAA;AAED,kBAAe,YAAY,CAAA"}

package/dist/LinePlotRenderer/index.d.ts

@@ -1,3 +1,3 @@
-export { default as ReactComponent } from "../WiggleRendering";
-export { default } from "./LinePlotRenderer";
-export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/LinePlotRenderer/index.js

@@ -3,18 +3,17 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.configSchema = exports.default = exports.ReactComponent = void 0;
-var configuration_1 = require("@jbrowse/core/configuration");
-var configSchema_1 = __importDefault(require("../configSchema"));
-var WiggleRendering_1 = require("../WiggleRendering");
-Object.defineProperty(exports, "ReactComponent", { enumerable: true, get: function () { return __importDefault(WiggleRendering_1).default; } });
-var LinePlotRenderer_1 = require("./LinePlotRenderer");
-Object.defineProperty(exports, "default", { enumerable: true, get: function () { return __importDefault(LinePlotRenderer_1).default; } });
-exports.configSchema = (0, configuration_1.ConfigurationSchema)('LinePlotRenderer', {
-    displayCrossHatches: {
-        type: 'boolean',
-        description: 'choose to draw cross hatches (sideways lines)',
-        defaultValue: false,
-    },
-}, { baseConfiguration: configSchema_1.default, explicitlyTyped: true });
+var configSchema_1 = __importDefault(require("./configSchema"));
+var WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
+var LinePlotRenderer_1 = __importDefault(require("./LinePlotRenderer"));
+exports.default = (function (pluginManager) {
+    pluginManager.addRendererType(function () {
+        return new LinePlotRenderer_1.default({
+            name: 'LinePlotRenderer',
+            ReactComponent: WiggleRendering_1.default,
+            configSchema: configSchema_1.default,
+            pluginManager: pluginManager,
+        });
+    });
+});
 //# sourceMappingURL=index.js.map

package/dist/LinePlotRenderer/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LinePlotRenderer/index.js"],"names":[],"mappings":";;;;;;AAAA,6DAAiE;AACjE,iEAA0C;AAE1C,sDAA8D;AAArD,kIAAA,OAAO,OAAkB;AAClC,uDAA4C;AAAnC,4HAAA,OAAO,OAAA;AAEH,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAC7C,kBAAkB,EAClB;IACE,mBAAmB,EAAE;QACnB,IAAI,EAAE,SAAS;QACf,WAAW,EAAE,+CAA+C;QAC5D,YAAY,EAAE,KAAK;KACpB;CACF,EACD,EAAE,iBAAiB,EAAE,sBAAY,EAAE,eAAe,EAAE,IAAI,EAAE,CAC3D,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LinePlotRenderer/index.ts"],"names":[],"mappings":";;;;;AACA,gEAAyC;AACzC,uEAA+C;AAC/C,wEAAiD;AAEjD,mBAAe,UAAC,aAA4B;IAC1C,aAAa,CAAC,eAAe,CAC3B;QACE,OAAA,IAAI,0BAAgB,CAAC;YACnB,IAAI,EAAE,kBAAkB;YACxB,cAAc,2BAAA;YACd,YAAY,wBAAA;YACZ,aAAa,eAAA;SACd,CAAC;IALF,CAKE,CACL,CAAA;AACH,CAAC,EAAA"}

package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts

@@ -1,10 +1,14 @@
 /// <reference types="react" />
-export default function SetColorDialog({ model, handleClose, }: {
+declare function SetColorDialog({ model, handleClose, }: {
     model: {
-        color: number;
+        color?: string;
+        posColor?: string;
+        negColor?: string;
         setColor: (arg?: string) => void;
         setPosColor: (arg?: string) => void;
         setNegColor: (arg?: string) => void;
     };
     handleClose: () => void;
 }): JSX.Element;
+declare const _default: typeof SetColorDialog;
+export default _default;

package/dist/LinearWiggleDisplay/components/SetColorDialog.js

@@ -43,10 +43,11 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 var react_1 = __importStar(require("react"));
+var mobx_react_1 = require("mobx-react");
 var material_1 = require("@mui/material");
 var mui_1 = require("tss-react/mui");
 var Close_1 = __importDefault(require("@mui/icons-material/Close"));
-var react_color_1 = require("react-color");
+var ColorPicker_1 = require("@jbrowse/core/ui/ColorPicker");
 var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
     closeButton: {
         position: 'absolute',
@@ -55,15 +56,6 @@ var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
         color: theme.palette.grey[500],
     },
 }); });
-// this is needed because passing a entire color object into the react-color
-// for alpha, can't pass in an rgba string for example
-function serialize(color) {
-    if (color instanceof Object) {
-        var _a = color, r = _a.r, g = _a.g, b = _a.b;
-        return "rgb(".concat(r, ",").concat(g, ",").concat(b, ")");
-    }
-    return color;
-}
 function SetColorDialog(_a) {
     var model = _a.model, handleClose = _a.handleClose;
     var classes = useStyles().classes;
@@ -78,17 +70,17 @@ function SetColorDialog(_a) {
             react_1.default.createElement(material_1.FormControlLabel, { checked: posneg, onClick: function () { return setPosNeg(true); }, control: react_1.default.createElement(material_1.Radio, null), label: 'Positive/negative color' }),
             posneg ? (react_1.default.createElement(react_1.default.Fragment, null,
                 react_1.default.createElement(material_1.Typography, null, "Positive color"),
-                react_1.default.createElement(react_color_1.CompactPicker, { onChange: function (event) {
-                        model.setPosColor(serialize(event.rgb));
+                react_1.default.createElement(ColorPicker_1.ColorPicker, { color: model.posColor || 'black', onChange: function (event) {
+                        model.setPosColor(event);
                         model.setColor(undefined);
                     } }),
                 react_1.default.createElement(material_1.Typography, null, "Negative color"),
-                react_1.default.createElement(react_color_1.CompactPicker, { onChange: function (event) {
-                        model.setNegColor(serialize(event.rgb));
+                react_1.default.createElement(ColorPicker_1.ColorPicker, { color: model.negColor || 'black', onChange: function (event) {
+                        model.setNegColor(event);
                         model.setColor(undefined);
                     } }))) : (react_1.default.createElement(react_1.default.Fragment, null,
                 react_1.default.createElement(material_1.Typography, null, "Overall color"),
-                react_1.default.createElement(react_color_1.CompactPicker, { onChange: function (event) { return model.setColor(serialize(event.rgb)); } })))),
+                react_1.default.createElement(ColorPicker_1.ColorPicker, { color: model.color || 'black', onChange: function (event) { return model.setColor(event); } })))),
         react_1.default.createElement(material_1.DialogActions, null,
             react_1.default.createElement(material_1.Button, { onClick: function () {
                     model.setPosColor(undefined);
@@ -97,5 +89,5 @@ function SetColorDialog(_a) {
                 }, color: "secondary", variant: "contained" }, "Restore default"),
             react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", type: "submit", onClick: function () { return handleClose(); } }, "Submit"))));
 }
-exports.default = SetColorDialog;
+exports.default = (0, mobx_react_1.observer)(SetColorDialog);
 //# sourceMappingURL=SetColorDialog.js.map

package/dist/LinearWiggleDisplay/components/SetColorDialog.js.map

@@ -1 +1 @@
-{"version":3,"file":"SetColorDialog.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/SetColorDialog.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6CAAuC;AACvC,0CAUsB;AACtB,qCAA0C;AAC1C,oEAAiD;AACjD,2CAA4D;AAE5D,IAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,UAAA,KAAK,IAAI,OAAA,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;CACF,CAAC,EAPsC,CAOtC,CAAC,CAAA;AAEH,4EAA4E;AAC5E,sDAAsD;AACtD,SAAS,SAAS,CAAC,KAAY;IAC7B,IAAI,KAAK,YAAY,MAAM,EAAE;QACrB,IAAA,KAAc,KAAiB,EAA7B,CAAC,OAAA,EAAE,CAAC,OAAA,EAAE,CAAC,OAAsB,CAAA;QACrC,OAAO,cAAO,CAAC,cAAI,CAAC,cAAI,CAAC,MAAG,CAAA;KAC7B;IACD,OAAO,KAAK,CAAA;AACd,CAAC;AAED,SAAwB,cAAc,CAAC,EAWtC;QAVC,KAAK,WAAA,EACL,WAAW,iBAAA;IAUH,IAAA,OAAO,GAAK,SAAS,EAAE,QAAhB,CAAgB;IACzB,IAAA,KAAA,OAAsB,IAAA,gBAAQ,EAAC,KAAK,CAAC,IAAA,EAApC,MAAM,QAAA,EAAE,SAAS,QAAmB,CAAA;IAE3C,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW;QAC/B,8BAAC,sBAAW;;YAGV,8BAAC,qBAAU,kBACE,OAAO,EAClB,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,WAAW;gBAEpB,8BAAC,eAAS,OAAG,CACF,CACD;QACd,8BAAC,wBAAa;YACZ,8BAAC,2BAAgB,IACf,OAAO,EAAE,CAAC,MAAM,EAChB,OAAO,EAAE,cAAM,OAAA,SAAS,CAAC,KAAK,CAAC,EAAhB,CAAgB,EAC/B,OAAO,EAAE,8BAAC,gBAAK,OAAG,EAClB,KAAK,EAAE,eAAe,GACtB;YACF,8BAAC,2BAAgB,IACf,OAAO,EAAE,MAAM,EACf,OAAO,EAAE,cAAM,OAAA,SAAS,CAAC,IAAI,CAAC,EAAf,CAAe,EAC9B,OAAO,EAAE,8BAAC,gBAAK,OAAG,EAClB,KAAK,EAAE,yBAAyB,GAChC;YAED,MAAM,CAAC,CAAC,CAAC,CACR;gBACE,8BAAC,qBAAU,yBAA4B;gBACvC,8BAAC,2BAAa,IACZ,QAAQ,EAAE,UAAA,KAAK;wBACb,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAA;wBACvC,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD;gBACF,8BAAC,qBAAU,yBAA4B;gBAEvC,8BAAC,2BAAa,IACZ,QAAQ,EAAE,UAAA,KAAK;wBACb,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAA;wBACvC,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD,CACD,CACJ,CAAC,CAAC,CAAC,CACF;gBACE,8BAAC,qBAAU,wBAA2B;gBACtC,8BAAC,2BAAa,IACZ,QAAQ,EAAE,UAAA,KAAK,IAAI,OAAA,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,EAApC,CAAoC,GACvD,CACD,CACJ,CACa;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IACL,OAAO,EAAE;oBACP,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;gBAC3B,CAAC,EACD,KAAK,EAAC,WAAW,EACjB,OAAO,EAAC,WAAW,sBAGZ;YAET,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,IAAI,EAAC,QAAQ,EACb,OAAO,EAAE,cAAM,OAAA,WAAW,EAAE,EAAb,CAAa,aAGrB,CACK,CACT,CACV,CAAA;AACH,CAAC;AA7FD,iCA6FC"}
+{"version":3,"file":"SetColorDialog.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/SetColorDialog.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6CAAuC;AACvC,yCAAqC;AACrC,0CAUsB;AACtB,qCAA0C;AAC1C,oEAAiD;AACjD,4DAA0D;AAE1D,IAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,UAAA,KAAK,IAAI,OAAA,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;CACF,CAAC,EAPsC,CAOtC,CAAC,CAAA;AAEH,SAAS,cAAc,CAAC,EAavB;QAZC,KAAK,WAAA,EACL,WAAW,iBAAA;IAYH,IAAA,OAAO,GAAK,SAAS,EAAE,QAAhB,CAAgB;IACzB,IAAA,KAAA,OAAsB,IAAA,gBAAQ,EAAC,KAAK,CAAC,IAAA,EAApC,MAAM,QAAA,EAAE,SAAS,QAAmB,CAAA;IAE3C,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW;QAC/B,8BAAC,sBAAW;;YAGV,8BAAC,qBAAU,kBACE,OAAO,EAClB,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,WAAW;gBAEpB,8BAAC,eAAS,OAAG,CACF,CACD;QACd,8BAAC,wBAAa;YACZ,8BAAC,2BAAgB,IACf,OAAO,EAAE,CAAC,MAAM,EAChB,OAAO,EAAE,cAAM,OAAA,SAAS,CAAC,KAAK,CAAC,EAAhB,CAAgB,EAC/B,OAAO,EAAE,8BAAC,gBAAK,OAAG,EAClB,KAAK,EAAE,eAAe,GACtB;YACF,8BAAC,2BAAgB,IACf,OAAO,EAAE,MAAM,EACf,OAAO,EAAE,cAAM,OAAA,SAAS,CAAC,IAAI,CAAC,EAAf,CAAe,EAC9B,OAAO,EAAE,8BAAC,gBAAK,OAAG,EAClB,KAAK,EAAE,yBAAyB,GAChC;YAED,MAAM,CAAC,CAAC,CAAC,CACR;gBACE,8BAAC,qBAAU,yBAA4B;gBACvC,8BAAC,yBAAW,IACV,KAAK,EAAE,KAAK,CAAC,QAAQ,IAAI,OAAO,EAChC,QAAQ,EAAE,UAAA,KAAK;wBACb,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAA;wBACxB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD;gBACF,8BAAC,qBAAU,yBAA4B;gBAEvC,8BAAC,yBAAW,IACV,KAAK,EAAE,KAAK,CAAC,QAAQ,IAAI,OAAO,EAChC,QAAQ,EAAE,UAAA,KAAK;wBACb,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAA;wBACxB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD,CACD,CACJ,CAAC,CAAC,CAAC,CACF;gBACE,8BAAC,qBAAU,wBAA2B;gBACtC,8BAAC,yBAAW,IACV,KAAK,EAAE,KAAK,CAAC,KAAK,IAAI,OAAO,EAC7B,QAAQ,EAAE,UAAA,KAAK,IAAI,OAAA,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,EAArB,CAAqB,GACxC,CACD,CACJ,CACa;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IACL,OAAO,EAAE;oBACP,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;gBAC3B,CAAC,EACD,KAAK,EAAC,WAAW,EACjB,OAAO,EAAC,WAAW,sBAGZ;YAET,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,IAAI,EAAC,QAAQ,EACb,OAAO,EAAE,cAAM,OAAA,WAAW,EAAE,EAAb,CAAa,aAGrB,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,cAAc,CAAC,CAAA"}

package/dist/LinearWiggleDisplay/components/Tooltip.d.ts

@@ -1,16 +1,10 @@
 import React from 'react';
-import { Feature } from '@jbrowse/core/util/simpleFeature';
+import { Feature } from '@jbrowse/core/util';
+import Tooltip, { TooltipContentsComponent } from '../../Tooltip';
+declare const TooltipContents: React.ForwardRefExoticComponent<{
+    feature: Feature;
+} & React.RefAttributes<HTMLDivElement>>;
 declare type Coord = [number, number];
-declare const Tooltip: ({ model, height, clientMouseCoord, offsetMouseCoord, clientRect, TooltipContents, }: {
-    model: {
-        featureUnderMouse: Feature;
-    };
-    height: number;
-    clientMouseCoord: Coord;
-    offsetMouseCoord: Coord;
-    clientRect?: DOMRect | undefined;
-    TooltipContents: React.FC<any>;
-}) => JSX.Element | null;
 declare const WiggleTooltip: (props: {
     model: {
         featureUnderMouse: Feature;
@@ -19,6 +13,7 @@ declare const WiggleTooltip: (props: {
     offsetMouseCoord: Coord;
     clientMouseCoord: Coord;
     clientRect?: DOMRect;
+    TooltipContents?: TooltipContentsComponent;
 }) => JSX.Element;
 export default WiggleTooltip;
 export { Tooltip };