@hongmaple0820/med-scale-research-os 0.43.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1104) hide show
  1. package/.scale/mcp-servers.yaml +144 -0
  2. package/.scale/skills.json +830 -0
  3. package/.scale/verification.json +52 -0
  4. package/LICENSE +15 -0
  5. package/README.en.md +156 -0
  6. package/README.md +156 -0
  7. package/dist/adapters/AiderAdapter.d.ts +22 -0
  8. package/dist/adapters/AiderAdapter.js +262 -0
  9. package/dist/adapters/AiderAdapter.js.map +1 -0
  10. package/dist/adapters/AntigravityAdapter.d.ts +4 -0
  11. package/dist/adapters/AntigravityAdapter.js +21 -0
  12. package/dist/adapters/AntigravityAdapter.js.map +1 -0
  13. package/dist/adapters/ClaudeCodeAdapter.d.ts +54 -0
  14. package/dist/adapters/ClaudeCodeAdapter.js +185 -0
  15. package/dist/adapters/ClaudeCodeAdapter.js.map +1 -0
  16. package/dist/adapters/ClineAdapter.d.ts +4 -0
  17. package/dist/adapters/ClineAdapter.js +20 -0
  18. package/dist/adapters/ClineAdapter.js.map +1 -0
  19. package/dist/adapters/CodexAdapter.d.ts +15 -0
  20. package/dist/adapters/CodexAdapter.js +160 -0
  21. package/dist/adapters/CodexAdapter.js.map +1 -0
  22. package/dist/adapters/CursorAdapter.d.ts +14 -0
  23. package/dist/adapters/CursorAdapter.js +171 -0
  24. package/dist/adapters/CursorAdapter.js.map +1 -0
  25. package/dist/adapters/DeepSeekTuiAdapter.d.ts +19 -0
  26. package/dist/adapters/DeepSeekTuiAdapter.js +263 -0
  27. package/dist/adapters/DeepSeekTuiAdapter.js.map +1 -0
  28. package/dist/adapters/DoubaoAdapter.d.ts +14 -0
  29. package/dist/adapters/DoubaoAdapter.js +184 -0
  30. package/dist/adapters/DoubaoAdapter.js.map +1 -0
  31. package/dist/adapters/GeminiAdapter.d.ts +14 -0
  32. package/dist/adapters/GeminiAdapter.js +163 -0
  33. package/dist/adapters/GeminiAdapter.js.map +1 -0
  34. package/dist/adapters/GenericProjectAgentAdapter.d.ts +29 -0
  35. package/dist/adapters/GenericProjectAgentAdapter.js +204 -0
  36. package/dist/adapters/GenericProjectAgentAdapter.js.map +1 -0
  37. package/dist/adapters/HermesAdapter.d.ts +14 -0
  38. package/dist/adapters/HermesAdapter.js +163 -0
  39. package/dist/adapters/HermesAdapter.js.map +1 -0
  40. package/dist/adapters/JCodeAdapter.d.ts +4 -0
  41. package/dist/adapters/JCodeAdapter.js +19 -0
  42. package/dist/adapters/JCodeAdapter.js.map +1 -0
  43. package/dist/adapters/KiloCodeAdapter.d.ts +4 -0
  44. package/dist/adapters/KiloCodeAdapter.js +20 -0
  45. package/dist/adapters/KiloCodeAdapter.js.map +1 -0
  46. package/dist/adapters/KimiAdapter.d.ts +14 -0
  47. package/dist/adapters/KimiAdapter.js +183 -0
  48. package/dist/adapters/KimiAdapter.js.map +1 -0
  49. package/dist/adapters/KiroAdapter.d.ts +14 -0
  50. package/dist/adapters/KiroAdapter.js +180 -0
  51. package/dist/adapters/KiroAdapter.js.map +1 -0
  52. package/dist/adapters/OpenClawAdapter.d.ts +14 -0
  53. package/dist/adapters/OpenClawAdapter.js +163 -0
  54. package/dist/adapters/OpenClawAdapter.js.map +1 -0
  55. package/dist/adapters/OpenCodeAdapter.d.ts +14 -0
  56. package/dist/adapters/OpenCodeAdapter.js +172 -0
  57. package/dist/adapters/OpenCodeAdapter.js.map +1 -0
  58. package/dist/adapters/QCoderAdapter.d.ts +14 -0
  59. package/dist/adapters/QCoderAdapter.js +159 -0
  60. package/dist/adapters/QCoderAdapter.js.map +1 -0
  61. package/dist/adapters/QoderAdapter.d.ts +4 -0
  62. package/dist/adapters/QoderAdapter.js +21 -0
  63. package/dist/adapters/QoderAdapter.js.map +1 -0
  64. package/dist/adapters/TraeAdapter.d.ts +14 -0
  65. package/dist/adapters/TraeAdapter.js +159 -0
  66. package/dist/adapters/TraeAdapter.js.map +1 -0
  67. package/dist/adapters/VSCAdapter.d.ts +14 -0
  68. package/dist/adapters/VSCAdapter.js +159 -0
  69. package/dist/adapters/VSCAdapter.js.map +1 -0
  70. package/dist/adapters/WindsurfAdapter.d.ts +14 -0
  71. package/dist/adapters/WindsurfAdapter.js +185 -0
  72. package/dist/adapters/WindsurfAdapter.js.map +1 -0
  73. package/dist/adapters/WorkBuddyAdapter.d.ts +14 -0
  74. package/dist/adapters/WorkBuddyAdapter.js +159 -0
  75. package/dist/adapters/WorkBuddyAdapter.js.map +1 -0
  76. package/dist/adapters/index.d.ts +32 -0
  77. package/dist/adapters/index.js +87 -0
  78. package/dist/adapters/index.js.map +1 -0
  79. package/dist/agents/AgentChannel.d.ts +43 -0
  80. package/dist/agents/AgentChannel.js +136 -0
  81. package/dist/agents/AgentChannel.js.map +1 -0
  82. package/dist/agents/AgentCoordinator.d.ts +29 -0
  83. package/dist/agents/AgentCoordinator.js +136 -0
  84. package/dist/agents/AgentCoordinator.js.map +1 -0
  85. package/dist/agents/AgentDispatcher.d.ts +24 -0
  86. package/dist/agents/AgentDispatcher.js +112 -0
  87. package/dist/agents/AgentDispatcher.js.map +1 -0
  88. package/dist/agents/AgentManager.d.ts +14 -0
  89. package/dist/agents/AgentManager.js +85 -0
  90. package/dist/agents/AgentManager.js.map +1 -0
  91. package/dist/agents/AgentPool.d.ts +59 -0
  92. package/dist/agents/AgentPool.js +192 -0
  93. package/dist/agents/AgentPool.js.map +1 -0
  94. package/dist/agents/AgentRegistry.d.ts +20 -0
  95. package/dist/agents/AgentRegistry.js +36 -0
  96. package/dist/agents/AgentRegistry.js.map +1 -0
  97. package/dist/agents/AgentSourceLoader.d.ts +73 -0
  98. package/dist/agents/AgentSourceLoader.js +103 -0
  99. package/dist/agents/AgentSourceLoader.js.map +1 -0
  100. package/dist/agents/IAgent.d.ts +53 -0
  101. package/dist/agents/IAgent.js +4 -0
  102. package/dist/agents/IAgent.js.map +1 -0
  103. package/dist/agents/LeadershipPresets.d.ts +16 -0
  104. package/dist/agents/LeadershipPresets.js +152 -0
  105. package/dist/agents/LeadershipPresets.js.map +1 -0
  106. package/dist/agents/definitions/debugger.d.ts +2 -0
  107. package/dist/agents/definitions/debugger.js +6 -0
  108. package/dist/agents/definitions/debugger.js.map +1 -0
  109. package/dist/agents/definitions/doc-writer.d.ts +2 -0
  110. package/dist/agents/definitions/doc-writer.js +6 -0
  111. package/dist/agents/definitions/doc-writer.js.map +1 -0
  112. package/dist/agents/definitions/implementer.d.ts +2 -0
  113. package/dist/agents/definitions/implementer.js +6 -0
  114. package/dist/agents/definitions/implementer.js.map +1 -0
  115. package/dist/agents/definitions/planner.d.ts +2 -0
  116. package/dist/agents/definitions/planner.js +6 -0
  117. package/dist/agents/definitions/planner.js.map +1 -0
  118. package/dist/agents/definitions/researcher.d.ts +2 -0
  119. package/dist/agents/definitions/researcher.js +6 -0
  120. package/dist/agents/definitions/researcher.js.map +1 -0
  121. package/dist/agents/definitions/reviewer.d.ts +2 -0
  122. package/dist/agents/definitions/reviewer.js +6 -0
  123. package/dist/agents/definitions/reviewer.js.map +1 -0
  124. package/dist/agents/definitions/security.d.ts +2 -0
  125. package/dist/agents/definitions/security.js +6 -0
  126. package/dist/agents/definitions/security.js.map +1 -0
  127. package/dist/agents/definitions/tester.d.ts +2 -0
  128. package/dist/agents/definitions/tester.js +6 -0
  129. package/dist/agents/definitions/tester.js.map +1 -0
  130. package/dist/agents/index.d.ts +23 -0
  131. package/dist/agents/index.js +44 -0
  132. package/dist/agents/index.js.map +1 -0
  133. package/dist/agents/profiles.d.ts +26 -0
  134. package/dist/agents/profiles.js +197 -0
  135. package/dist/agents/profiles.js.map +1 -0
  136. package/dist/agents/types.d.ts +262 -0
  137. package/dist/agents/types.js +4 -0
  138. package/dist/agents/types.js.map +1 -0
  139. package/dist/api/cli.d.ts +2 -0
  140. package/dist/api/cli.js +6678 -0
  141. package/dist/api/cli.js.map +1 -0
  142. package/dist/api/doctor.d.ts +83 -0
  143. package/dist/api/doctor.js +982 -0
  144. package/dist/api/doctor.js.map +1 -0
  145. package/dist/api/mcp.d.ts +32 -0
  146. package/dist/api/mcp.js +223 -0
  147. package/dist/api/mcp.js.map +1 -0
  148. package/dist/api/medscale.d.ts +2 -0
  149. package/dist/api/medscale.js +20 -0
  150. package/dist/api/medscale.js.map +1 -0
  151. package/dist/api/quickstart.d.ts +86 -0
  152. package/dist/api/quickstart.js +291 -0
  153. package/dist/api/quickstart.js.map +1 -0
  154. package/dist/artifact/fsm.d.ts +41 -0
  155. package/dist/artifact/fsm.js +221 -0
  156. package/dist/artifact/fsm.js.map +1 -0
  157. package/dist/artifact/fsmDefinitions.d.ts +18 -0
  158. package/dist/artifact/fsmDefinitions.js +296 -0
  159. package/dist/artifact/fsmDefinitions.js.map +1 -0
  160. package/dist/artifact/sqliteStore.d.ts +61 -0
  161. package/dist/artifact/sqliteStore.js +381 -0
  162. package/dist/artifact/sqliteStore.js.map +1 -0
  163. package/dist/artifact/store.d.ts +49 -0
  164. package/dist/artifact/store.js +116 -0
  165. package/dist/artifact/store.js.map +1 -0
  166. package/dist/artifact/types.d.ts +535 -0
  167. package/dist/artifact/types.js +74 -0
  168. package/dist/artifact/types.js.map +1 -0
  169. package/dist/bootstrap/DependencyBootstrap.d.ts +112 -0
  170. package/dist/bootstrap/DependencyBootstrap.js +1046 -0
  171. package/dist/bootstrap/DependencyBootstrap.js.map +1 -0
  172. package/dist/bootstrap/DependencyBootstrapRenderer.d.ts +3 -0
  173. package/dist/bootstrap/DependencyBootstrapRenderer.js +138 -0
  174. package/dist/bootstrap/DependencyBootstrapRenderer.js.map +1 -0
  175. package/dist/bridge/PythonBridge.d.ts +80 -0
  176. package/dist/bridge/PythonBridge.js +437 -0
  177. package/dist/bridge/PythonBridge.js.map +1 -0
  178. package/dist/bridge/index.d.ts +2 -0
  179. package/dist/bridge/index.js +7 -0
  180. package/dist/bridge/index.js.map +1 -0
  181. package/dist/bridge/medicalWorkflows.d.ts +29 -0
  182. package/dist/bridge/medicalWorkflows.js +156 -0
  183. package/dist/bridge/medicalWorkflows.js.map +1 -0
  184. package/dist/bridge/types.d.ts +381 -0
  185. package/dist/bridge/types.js +113 -0
  186. package/dist/bridge/types.js.map +1 -0
  187. package/dist/cache/ScanCache.d.ts +41 -0
  188. package/dist/cache/ScanCache.js +120 -0
  189. package/dist/cache/ScanCache.js.map +1 -0
  190. package/dist/capabilities/BrowserCapability.d.ts +30 -0
  191. package/dist/capabilities/BrowserCapability.js +73 -0
  192. package/dist/capabilities/BrowserCapability.js.map +1 -0
  193. package/dist/capabilities/BrowserQACapability.d.ts +165 -0
  194. package/dist/capabilities/BrowserQACapability.js +438 -0
  195. package/dist/capabilities/BrowserQACapability.js.map +1 -0
  196. package/dist/capabilities/CapabilityRegistry.d.ts +17 -0
  197. package/dist/capabilities/CapabilityRegistry.js +65 -0
  198. package/dist/capabilities/CapabilityRegistry.js.map +1 -0
  199. package/dist/capabilities/ComputerCapability.d.ts +28 -0
  200. package/dist/capabilities/ComputerCapability.js +40 -0
  201. package/dist/capabilities/ComputerCapability.js.map +1 -0
  202. package/dist/capabilities/InstalledSkillsIntegration.d.ts +69 -0
  203. package/dist/capabilities/InstalledSkillsIntegration.js +240 -0
  204. package/dist/capabilities/InstalledSkillsIntegration.js.map +1 -0
  205. package/dist/capabilities/SearchCapability.d.ts +46 -0
  206. package/dist/capabilities/SearchCapability.js +88 -0
  207. package/dist/capabilities/SearchCapability.js.map +1 -0
  208. package/dist/capabilities/index.d.ts +6 -0
  209. package/dist/capabilities/index.js +9 -0
  210. package/dist/capabilities/index.js.map +1 -0
  211. package/dist/capabilities/types.d.ts +92 -0
  212. package/dist/capabilities/types.js +7 -0
  213. package/dist/capabilities/types.js.map +1 -0
  214. package/dist/cli/autofixCommands.d.ts +22 -0
  215. package/dist/cli/autofixCommands.js +32 -0
  216. package/dist/cli/autofixCommands.js.map +1 -0
  217. package/dist/cli/cortexCommands.d.ts +71 -0
  218. package/dist/cli/cortexCommands.js +335 -0
  219. package/dist/cli/cortexCommands.js.map +1 -0
  220. package/dist/cli/costCommands.d.ts +13 -0
  221. package/dist/cli/costCommands.js +48 -0
  222. package/dist/cli/costCommands.js.map +1 -0
  223. package/dist/cli/evolutionCommands.d.ts +112 -0
  224. package/dist/cli/evolutionCommands.js +246 -0
  225. package/dist/cli/evolutionCommands.js.map +1 -0
  226. package/dist/cli/gateStatusCommands.d.ts +1 -0
  227. package/dist/cli/gateStatusCommands.js +52 -0
  228. package/dist/cli/gateStatusCommands.js.map +1 -0
  229. package/dist/cli/liteCommands.d.ts +81 -0
  230. package/dist/cli/liteCommands.js +148 -0
  231. package/dist/cli/liteCommands.js.map +1 -0
  232. package/dist/cli/orchCommands.d.ts +43 -0
  233. package/dist/cli/orchCommands.js +135 -0
  234. package/dist/cli/orchCommands.js.map +1 -0
  235. package/dist/cli/phaseCommands.d.ts +248 -0
  236. package/dist/cli/phaseCommands.js +1878 -0
  237. package/dist/cli/phaseCommands.js.map +1 -0
  238. package/dist/cli/promptCommands.d.ts +1 -0
  239. package/dist/cli/promptCommands.js +57 -0
  240. package/dist/cli/promptCommands.js.map +1 -0
  241. package/dist/cli/qaCommands.d.ts +22 -0
  242. package/dist/cli/qaCommands.js +84 -0
  243. package/dist/cli/qaCommands.js.map +1 -0
  244. package/dist/cli/quickstartCommands.d.ts +17 -0
  245. package/dist/cli/quickstartCommands.js +47 -0
  246. package/dist/cli/quickstartCommands.js.map +1 -0
  247. package/dist/cli/runCommand.d.ts +39 -0
  248. package/dist/cli/runCommand.js +113 -0
  249. package/dist/cli/runCommand.js.map +1 -0
  250. package/dist/cli/scoreCommands.d.ts +1 -0
  251. package/dist/cli/scoreCommands.js +112 -0
  252. package/dist/cli/scoreCommands.js.map +1 -0
  253. package/dist/cli/shieldCommands.d.ts +30 -0
  254. package/dist/cli/shieldCommands.js +212 -0
  255. package/dist/cli/shieldCommands.js.map +1 -0
  256. package/dist/cli/targetCommands.d.ts +552 -0
  257. package/dist/cli/targetCommands.js +3173 -0
  258. package/dist/cli/targetCommands.js.map +1 -0
  259. package/dist/cli/tuiCommands.d.ts +7 -0
  260. package/dist/cli/tuiCommands.js +33 -0
  261. package/dist/cli/tuiCommands.js.map +1 -0
  262. package/dist/cli/vibeCommands.d.ts +64 -0
  263. package/dist/cli/vibeCommands.js +221 -0
  264. package/dist/cli/vibeCommands.js.map +1 -0
  265. package/dist/codegraph/CodeIntelligence.d.ts +147 -0
  266. package/dist/codegraph/CodeIntelligence.js +681 -0
  267. package/dist/codegraph/CodeIntelligence.js.map +1 -0
  268. package/dist/config/profiles.d.ts +64 -0
  269. package/dist/config/profiles.js +223 -0
  270. package/dist/config/profiles.js.map +1 -0
  271. package/dist/context/AntiPatternRegistry.d.ts +38 -0
  272. package/dist/context/AntiPatternRegistry.js +203 -0
  273. package/dist/context/AntiPatternRegistry.js.map +1 -0
  274. package/dist/context/CavemanCompressor.d.ts +20 -0
  275. package/dist/context/CavemanCompressor.js +14 -0
  276. package/dist/context/CavemanCompressor.js.map +1 -0
  277. package/dist/context/ContextBudget.d.ts +128 -0
  278. package/dist/context/ContextBudget.js +423 -0
  279. package/dist/context/ContextBudget.js.map +1 -0
  280. package/dist/context/ContextBuilder.d.ts +71 -0
  281. package/dist/context/ContextBuilder.js +372 -0
  282. package/dist/context/ContextBuilder.js.map +1 -0
  283. package/dist/context/ContextCompiler.d.ts +34 -0
  284. package/dist/context/ContextCompiler.js +120 -0
  285. package/dist/context/ContextCompiler.js.map +1 -0
  286. package/dist/context/ProjectAnatomy.d.ts +18 -0
  287. package/dist/context/ProjectAnatomy.js +287 -0
  288. package/dist/context/ProjectAnatomy.js.map +1 -0
  289. package/dist/context/SessionStartSequence.d.ts +54 -0
  290. package/dist/context/SessionStartSequence.js +162 -0
  291. package/dist/context/SessionStartSequence.js.map +1 -0
  292. package/dist/core/ExternalCommand.d.ts +9 -0
  293. package/dist/core/ExternalCommand.js +70 -0
  294. package/dist/core/ExternalCommand.js.map +1 -0
  295. package/dist/core/GbrainRuntime.d.ts +25 -0
  296. package/dist/core/GbrainRuntime.js +270 -0
  297. package/dist/core/GbrainRuntime.js.map +1 -0
  298. package/dist/core/container.d.ts +14 -0
  299. package/dist/core/container.js +35 -0
  300. package/dist/core/container.js.map +1 -0
  301. package/dist/core/eventBus.d.ts +60 -0
  302. package/dist/core/eventBus.js +157 -0
  303. package/dist/core/eventBus.js.map +1 -0
  304. package/dist/core/logger.d.ts +5 -0
  305. package/dist/core/logger.js +51 -0
  306. package/dist/core/logger.js.map +1 -0
  307. package/dist/cortex/GovernanceMetrics.d.ts +66 -0
  308. package/dist/cortex/GovernanceMetrics.js +230 -0
  309. package/dist/cortex/GovernanceMetrics.js.map +1 -0
  310. package/dist/cortex/InstinctExtractor.d.ts +61 -0
  311. package/dist/cortex/InstinctExtractor.js +184 -0
  312. package/dist/cortex/InstinctExtractor.js.map +1 -0
  313. package/dist/cortex/InstinctStore.d.ts +54 -0
  314. package/dist/cortex/InstinctStore.js +266 -0
  315. package/dist/cortex/InstinctStore.js.map +1 -0
  316. package/dist/cortex/ReflexionEngine.d.ts +34 -0
  317. package/dist/cortex/ReflexionEngine.js +157 -0
  318. package/dist/cortex/ReflexionEngine.js.map +1 -0
  319. package/dist/cortex/SessionInjector.d.ts +44 -0
  320. package/dist/cortex/SessionInjector.js +127 -0
  321. package/dist/cortex/SessionInjector.js.map +1 -0
  322. package/dist/cortex/adapters/ClaudeAdapter.d.ts +17 -0
  323. package/dist/cortex/adapters/ClaudeAdapter.js +61 -0
  324. package/dist/cortex/adapters/ClaudeAdapter.js.map +1 -0
  325. package/dist/cortex/adapters/CodexAdapter.d.ts +10 -0
  326. package/dist/cortex/adapters/CodexAdapter.js +52 -0
  327. package/dist/cortex/adapters/CodexAdapter.js.map +1 -0
  328. package/dist/cortex/adapters/CursorAdapter.d.ts +10 -0
  329. package/dist/cortex/adapters/CursorAdapter.js +46 -0
  330. package/dist/cortex/adapters/CursorAdapter.js.map +1 -0
  331. package/dist/cortex/adapters/GeminiAdapter.d.ts +11 -0
  332. package/dist/cortex/adapters/GeminiAdapter.js +48 -0
  333. package/dist/cortex/adapters/GeminiAdapter.js.map +1 -0
  334. package/dist/dashboard/DashboardServer.d.ts +86 -0
  335. package/dist/dashboard/DashboardServer.js +380 -0
  336. package/dist/dashboard/DashboardServer.js.map +1 -0
  337. package/dist/dashboard/MedicalWorkflowData.d.ts +155 -0
  338. package/dist/dashboard/MedicalWorkflowData.js +664 -0
  339. package/dist/dashboard/MedicalWorkflowData.js.map +1 -0
  340. package/dist/dashboard/MetricsAggregator.d.ts +38 -0
  341. package/dist/dashboard/MetricsAggregator.js +99 -0
  342. package/dist/dashboard/MetricsAggregator.js.map +1 -0
  343. package/dist/dashboard/index.d.ts +4 -0
  344. package/dist/dashboard/index.js +3 -0
  345. package/dist/dashboard/index.js.map +1 -0
  346. package/dist/dashboard/server.d.ts +52 -0
  347. package/dist/dashboard/server.js +84 -0
  348. package/dist/dashboard/server.js.map +1 -0
  349. package/dist/env/EnvironmentDoctor.d.ts +66 -0
  350. package/dist/env/EnvironmentDoctor.js +581 -0
  351. package/dist/env/EnvironmentDoctor.js.map +1 -0
  352. package/dist/eval/BenchmarkPublisher.d.ts +25 -0
  353. package/dist/eval/BenchmarkPublisher.js +27 -0
  354. package/dist/eval/BenchmarkPublisher.js.map +1 -0
  355. package/dist/eval/WorkflowEval.d.ts +161 -0
  356. package/dist/eval/WorkflowEval.js +377 -0
  357. package/dist/eval/WorkflowEval.js.map +1 -0
  358. package/dist/evolution/AutoDefectCreator.d.ts +43 -0
  359. package/dist/evolution/AutoDefectCreator.js +157 -0
  360. package/dist/evolution/AutoDefectCreator.js.map +1 -0
  361. package/dist/evolution/BehaviorTracker.d.ts +46 -0
  362. package/dist/evolution/BehaviorTracker.js +67 -0
  363. package/dist/evolution/BehaviorTracker.js.map +1 -0
  364. package/dist/evolution/EvolutionEngine.d.ts +102 -0
  365. package/dist/evolution/EvolutionEngine.js +326 -0
  366. package/dist/evolution/EvolutionEngine.js.map +1 -0
  367. package/dist/evolution/EvolutionEvaluator.d.ts +61 -0
  368. package/dist/evolution/EvolutionEvaluator.js +118 -0
  369. package/dist/evolution/EvolutionEvaluator.js.map +1 -0
  370. package/dist/evolution/LessonValidator.d.ts +36 -0
  371. package/dist/evolution/LessonValidator.js +132 -0
  372. package/dist/evolution/LessonValidator.js.map +1 -0
  373. package/dist/evolution/PatternExtractor.d.ts +40 -0
  374. package/dist/evolution/PatternExtractor.js +83 -0
  375. package/dist/evolution/PatternExtractor.js.map +1 -0
  376. package/dist/evolution/RuleMaturity.d.ts +39 -0
  377. package/dist/evolution/RuleMaturity.js +70 -0
  378. package/dist/evolution/RuleMaturity.js.map +1 -0
  379. package/dist/evolution/SessionLearnings.d.ts +70 -0
  380. package/dist/evolution/SessionLearnings.js +217 -0
  381. package/dist/evolution/SessionLearnings.js.map +1 -0
  382. package/dist/evolution/SkillCreator.d.ts +75 -0
  383. package/dist/evolution/SkillCreator.js +219 -0
  384. package/dist/evolution/SkillCreator.js.map +1 -0
  385. package/dist/fsm/FSMAgentBridge.d.ts +59 -0
  386. package/dist/fsm/FSMAgentBridge.js +193 -0
  387. package/dist/fsm/FSMAgentBridge.js.map +1 -0
  388. package/dist/fsm/index.d.ts +2 -0
  389. package/dist/fsm/index.js +3 -0
  390. package/dist/fsm/index.js.map +1 -0
  391. package/dist/governance/GovernanceRoi.d.ts +30 -0
  392. package/dist/governance/GovernanceRoi.js +102 -0
  393. package/dist/governance/GovernanceRoi.js.map +1 -0
  394. package/dist/governance/ProgressiveGovernance.d.ts +22 -0
  395. package/dist/governance/ProgressiveGovernance.js +159 -0
  396. package/dist/governance/ProgressiveGovernance.js.map +1 -0
  397. package/dist/guardrails/ActiveRedTeam.d.ts +46 -0
  398. package/dist/guardrails/ActiveRedTeam.js +203 -0
  399. package/dist/guardrails/ActiveRedTeam.js.map +1 -0
  400. package/dist/guardrails/DependencyAuditor.d.ts +68 -0
  401. package/dist/guardrails/DependencyAuditor.js +378 -0
  402. package/dist/guardrails/DependencyAuditor.js.map +1 -0
  403. package/dist/guardrails/DetectorEnhanced.d.ts +111 -0
  404. package/dist/guardrails/DetectorEnhanced.js +202 -0
  405. package/dist/guardrails/DetectorEnhanced.js.map +1 -0
  406. package/dist/guardrails/GateEvaluator.d.ts +18 -0
  407. package/dist/guardrails/GateEvaluator.js +129 -0
  408. package/dist/guardrails/GateEvaluator.js.map +1 -0
  409. package/dist/guardrails/Gateway.d.ts +26 -0
  410. package/dist/guardrails/Gateway.js +56 -0
  411. package/dist/guardrails/Gateway.js.map +1 -0
  412. package/dist/guardrails/OWASPDetector.d.ts +58 -0
  413. package/dist/guardrails/OWASPDetector.js +508 -0
  414. package/dist/guardrails/OWASPDetector.js.map +1 -0
  415. package/dist/guardrails/ReviewEnforcer.d.ts +52 -0
  416. package/dist/guardrails/ReviewEnforcer.js +117 -0
  417. package/dist/guardrails/ReviewEnforcer.js.map +1 -0
  418. package/dist/guardrails/advancedDetectors.d.ts +38 -0
  419. package/dist/guardrails/advancedDetectors.js +188 -0
  420. package/dist/guardrails/advancedDetectors.js.map +1 -0
  421. package/dist/guardrails/detectors.d.ts +34 -0
  422. package/dist/guardrails/detectors.js +332 -0
  423. package/dist/guardrails/detectors.js.map +1 -0
  424. package/dist/guardrails/roles.d.ts +4 -0
  425. package/dist/guardrails/roles.js +54 -0
  426. package/dist/guardrails/roles.js.map +1 -0
  427. package/dist/hooks/BugPatternDetector.d.ts +36 -0
  428. package/dist/hooks/BugPatternDetector.js +207 -0
  429. package/dist/hooks/BugPatternDetector.js.map +1 -0
  430. package/dist/hooks/HookDeployer.d.ts +44 -0
  431. package/dist/hooks/HookDeployer.js +144 -0
  432. package/dist/hooks/HookDeployer.js.map +1 -0
  433. package/dist/hooks/HookGeneratorEnhanced.d.ts +67 -0
  434. package/dist/hooks/HookGeneratorEnhanced.js +641 -0
  435. package/dist/hooks/HookGeneratorEnhanced.js.map +1 -0
  436. package/dist/hooks/WorkflowHooksManager.d.ts +30 -0
  437. package/dist/hooks/WorkflowHooksManager.js +160 -0
  438. package/dist/hooks/WorkflowHooksManager.js.map +1 -0
  439. package/dist/hooks/index.d.ts +6 -0
  440. package/dist/hooks/index.js +5 -0
  441. package/dist/hooks/index.js.map +1 -0
  442. package/dist/i18n/Language.d.ts +9 -0
  443. package/dist/i18n/Language.js +38 -0
  444. package/dist/i18n/Language.js.map +1 -0
  445. package/dist/index.d.ts +101 -0
  446. package/dist/index.js +104 -0
  447. package/dist/index.js.map +1 -0
  448. package/dist/knowledge/CerebrumManager.d.ts +25 -0
  449. package/dist/knowledge/CerebrumManager.js +127 -0
  450. package/dist/knowledge/CerebrumManager.js.map +1 -0
  451. package/dist/knowledge/GraphifyKnowledgeBase.d.ts +38 -0
  452. package/dist/knowledge/GraphifyKnowledgeBase.js +409 -0
  453. package/dist/knowledge/GraphifyKnowledgeBase.js.map +1 -0
  454. package/dist/knowledge/KnowledgeBase.d.ts +51 -0
  455. package/dist/knowledge/KnowledgeBase.js +182 -0
  456. package/dist/knowledge/KnowledgeBase.js.map +1 -0
  457. package/dist/knowledge/SQLiteKnowledgeBase.d.ts +29 -0
  458. package/dist/knowledge/SQLiteKnowledgeBase.js +203 -0
  459. package/dist/knowledge/SQLiteKnowledgeBase.js.map +1 -0
  460. package/dist/knowledge/TfidfIndex.d.ts +50 -0
  461. package/dist/knowledge/TfidfIndex.js +177 -0
  462. package/dist/knowledge/TfidfIndex.js.map +1 -0
  463. package/dist/knowledge/UbiquitousLanguageManager.d.ts +49 -0
  464. package/dist/knowledge/UbiquitousLanguageManager.js +133 -0
  465. package/dist/knowledge/UbiquitousLanguageManager.js.map +1 -0
  466. package/dist/memory/MemoryBrain.d.ts +146 -0
  467. package/dist/memory/MemoryBrain.js +679 -0
  468. package/dist/memory/MemoryBrain.js.map +1 -0
  469. package/dist/memory/MemoryFabric.d.ts +130 -0
  470. package/dist/memory/MemoryFabric.js +317 -0
  471. package/dist/memory/MemoryFabric.js.map +1 -0
  472. package/dist/memory/MemoryIntelligence.d.ts +42 -0
  473. package/dist/memory/MemoryIntelligence.js +215 -0
  474. package/dist/memory/MemoryIntelligence.js.map +1 -0
  475. package/dist/memory/MemoryLearning.d.ts +62 -0
  476. package/dist/memory/MemoryLearning.js +209 -0
  477. package/dist/memory/MemoryLearning.js.map +1 -0
  478. package/dist/memory/MemoryProviders.d.ts +165 -0
  479. package/dist/memory/MemoryProviders.js +940 -0
  480. package/dist/memory/MemoryProviders.js.map +1 -0
  481. package/dist/memory/MemoryReview.d.ts +65 -0
  482. package/dist/memory/MemoryReview.js +260 -0
  483. package/dist/memory/MemoryReview.js.map +1 -0
  484. package/dist/memory/index.d.ts +6 -0
  485. package/dist/memory/index.js +7 -0
  486. package/dist/memory/index.js.map +1 -0
  487. package/dist/orchestration/EffectsWiring.d.ts +8 -0
  488. package/dist/orchestration/EffectsWiring.js +87 -0
  489. package/dist/orchestration/EffectsWiring.js.map +1 -0
  490. package/dist/orchestrator/OrchestratorDaemon.d.ts +44 -0
  491. package/dist/orchestrator/OrchestratorDaemon.js +150 -0
  492. package/dist/orchestrator/OrchestratorDaemon.js.map +1 -0
  493. package/dist/orchestrator/PolicyLoader.d.ts +80 -0
  494. package/dist/orchestrator/PolicyLoader.js +229 -0
  495. package/dist/orchestrator/PolicyLoader.js.map +1 -0
  496. package/dist/orchestrator/ReconciliationLoop.d.ts +71 -0
  497. package/dist/orchestrator/ReconciliationLoop.js +266 -0
  498. package/dist/orchestrator/ReconciliationLoop.js.map +1 -0
  499. package/dist/orchestrator/TrackerAdapter.d.ts +60 -0
  500. package/dist/orchestrator/TrackerAdapter.js +147 -0
  501. package/dist/orchestrator/TrackerAdapter.js.map +1 -0
  502. package/dist/orchestrator/WorkspaceManager.d.ts +66 -0
  503. package/dist/orchestrator/WorkspaceManager.js +257 -0
  504. package/dist/orchestrator/WorkspaceManager.js.map +1 -0
  505. package/dist/output/BrandThemeLoader.d.ts +54 -0
  506. package/dist/output/BrandThemeLoader.js +340 -0
  507. package/dist/output/BrandThemeLoader.js.map +1 -0
  508. package/dist/output/GovernanceDashboard.d.ts +59 -0
  509. package/dist/output/GovernanceDashboard.js +281 -0
  510. package/dist/output/GovernanceDashboard.js.map +1 -0
  511. package/dist/output/HTMLArtifactLayer.d.ts +97 -0
  512. package/dist/output/HTMLArtifactLayer.js +576 -0
  513. package/dist/output/HTMLArtifactLayer.js.map +1 -0
  514. package/dist/output/HTMLDocumentRenderer.d.ts +83 -0
  515. package/dist/output/HTMLDocumentRenderer.js +718 -0
  516. package/dist/output/HTMLDocumentRenderer.js.map +1 -0
  517. package/dist/output/UIPrototypeRenderer.d.ts +61 -0
  518. package/dist/output/UIPrototypeRenderer.js +500 -0
  519. package/dist/output/UIPrototypeRenderer.js.map +1 -0
  520. package/dist/output/index.d.ts +10 -0
  521. package/dist/output/index.js +8 -0
  522. package/dist/output/index.js.map +1 -0
  523. package/dist/prompts/PhasePromptRegistry.d.ts +53 -0
  524. package/dist/prompts/PhasePromptRegistry.js +517 -0
  525. package/dist/prompts/PhasePromptRegistry.js.map +1 -0
  526. package/dist/prompts/PromptOptimizer.d.ts +42 -0
  527. package/dist/prompts/PromptOptimizer.js +309 -0
  528. package/dist/prompts/PromptOptimizer.js.map +1 -0
  529. package/dist/prompts/VibeTemplateGallery.d.ts +25 -0
  530. package/dist/prompts/VibeTemplateGallery.js +295 -0
  531. package/dist/prompts/VibeTemplateGallery.js.map +1 -0
  532. package/dist/qa/BrowserDaemon.d.ts +23 -0
  533. package/dist/qa/BrowserDaemon.js +79 -0
  534. package/dist/qa/BrowserDaemon.js.map +1 -0
  535. package/dist/qa/E2ETestOrchestrator.d.ts +14 -0
  536. package/dist/qa/E2ETestOrchestrator.js +19 -0
  537. package/dist/qa/E2ETestOrchestrator.js.map +1 -0
  538. package/dist/review/CrossModelReviewer.d.ts +35 -0
  539. package/dist/review/CrossModelReviewer.js +75 -0
  540. package/dist/review/CrossModelReviewer.js.map +1 -0
  541. package/dist/review/ReviewAggregator.d.ts +13 -0
  542. package/dist/review/ReviewAggregator.js +28 -0
  543. package/dist/review/ReviewAggregator.js.map +1 -0
  544. package/dist/review/reviewCommands.d.ts +15 -0
  545. package/dist/review/reviewCommands.js +24 -0
  546. package/dist/review/reviewCommands.js.map +1 -0
  547. package/dist/routing/LocalModelProvider.d.ts +11 -0
  548. package/dist/routing/LocalModelProvider.js +21 -0
  549. package/dist/routing/LocalModelProvider.js.map +1 -0
  550. package/dist/routing/ModelRouter.d.ts +42 -0
  551. package/dist/routing/ModelRouter.js +94 -0
  552. package/dist/routing/ModelRouter.js.map +1 -0
  553. package/dist/routing/PromptCachePolicy.d.ts +37 -0
  554. package/dist/routing/PromptCachePolicy.js +97 -0
  555. package/dist/routing/PromptCachePolicy.js.map +1 -0
  556. package/dist/runtime/AiOsRuntime.d.ts +485 -0
  557. package/dist/runtime/AiOsRuntime.js +1846 -0
  558. package/dist/runtime/AiOsRuntime.js.map +1 -0
  559. package/dist/runtime/CostAnalyzer.d.ts +53 -0
  560. package/dist/runtime/CostAnalyzer.js +160 -0
  561. package/dist/runtime/CostAnalyzer.js.map +1 -0
  562. package/dist/runtime/CostOptimizer.d.ts +11 -0
  563. package/dist/runtime/CostOptimizer.js +21 -0
  564. package/dist/runtime/CostOptimizer.js.map +1 -0
  565. package/dist/runtime/ExecutionLedger.d.ts +46 -0
  566. package/dist/runtime/ExecutionLedger.js +71 -0
  567. package/dist/runtime/ExecutionLedger.js.map +1 -0
  568. package/dist/runtime/FinalReportGuard.d.ts +16 -0
  569. package/dist/runtime/FinalReportGuard.js +14 -0
  570. package/dist/runtime/FinalReportGuard.js.map +1 -0
  571. package/dist/runtime/ModelUsageLedger.d.ts +101 -0
  572. package/dist/runtime/ModelUsageLedger.js +296 -0
  573. package/dist/runtime/ModelUsageLedger.js.map +1 -0
  574. package/dist/runtime/RuntimeDoctor.d.ts +23 -0
  575. package/dist/runtime/RuntimeDoctor.js +151 -0
  576. package/dist/runtime/RuntimeDoctor.js.map +1 -0
  577. package/dist/runtime/RuntimeEvidenceLedger.d.ts +50 -0
  578. package/dist/runtime/RuntimeEvidenceLedger.js +89 -0
  579. package/dist/runtime/RuntimeEvidenceLedger.js.map +1 -0
  580. package/dist/runtime/SessionLedger.d.ts +53 -0
  581. package/dist/runtime/SessionLedger.js +104 -0
  582. package/dist/runtime/SessionLedger.js.map +1 -0
  583. package/dist/runtime/index.d.ts +7 -0
  584. package/dist/runtime/index.js +8 -0
  585. package/dist/runtime/index.js.map +1 -0
  586. package/dist/setup/SetupVerification.d.ts +42 -0
  587. package/dist/setup/SetupVerification.js +180 -0
  588. package/dist/setup/SetupVerification.js.map +1 -0
  589. package/dist/setup/SetupWizard.d.ts +45 -0
  590. package/dist/setup/SetupWizard.js +216 -0
  591. package/dist/setup/SetupWizard.js.map +1 -0
  592. package/dist/shield/PolicyCompiler.d.ts +70 -0
  593. package/dist/shield/PolicyCompiler.js +540 -0
  594. package/dist/shield/PolicyCompiler.js.map +1 -0
  595. package/dist/shield/ProtectedPaths.d.ts +39 -0
  596. package/dist/shield/ProtectedPaths.js +179 -0
  597. package/dist/shield/ProtectedPaths.js.map +1 -0
  598. package/dist/shield/ShieldProtocol.d.ts +50 -0
  599. package/dist/shield/ShieldProtocol.js +103 -0
  600. package/dist/shield/ShieldProtocol.js.map +1 -0
  601. package/dist/skills/ExternalSkills.d.ts +3 -0
  602. package/dist/skills/ExternalSkills.js +27 -0
  603. package/dist/skills/ExternalSkills.js.map +1 -0
  604. package/dist/skills/GrillingSessionSkill.d.ts +65 -0
  605. package/dist/skills/GrillingSessionSkill.js +113 -0
  606. package/dist/skills/GrillingSessionSkill.js.map +1 -0
  607. package/dist/skills/GrillingTemplates.d.ts +7 -0
  608. package/dist/skills/GrillingTemplates.js +38 -0
  609. package/dist/skills/GrillingTemplates.js.map +1 -0
  610. package/dist/skills/RoleSkills.d.ts +20 -0
  611. package/dist/skills/RoleSkills.js +154 -0
  612. package/dist/skills/RoleSkills.js.map +1 -0
  613. package/dist/skills/SkillCatalog.d.ts +13 -0
  614. package/dist/skills/SkillCatalog.js +184 -0
  615. package/dist/skills/SkillCatalog.js.map +1 -0
  616. package/dist/skills/SkillDiscovery.d.ts +84 -0
  617. package/dist/skills/SkillDiscovery.js +402 -0
  618. package/dist/skills/SkillDiscovery.js.map +1 -0
  619. package/dist/skills/SkillDoctor.d.ts +37 -0
  620. package/dist/skills/SkillDoctor.js +267 -0
  621. package/dist/skills/SkillDoctor.js.map +1 -0
  622. package/dist/skills/SkillExecutor.d.ts +38 -0
  623. package/dist/skills/SkillExecutor.js +237 -0
  624. package/dist/skills/SkillExecutor.js.map +1 -0
  625. package/dist/skills/SkillFrontmatter.d.ts +28 -0
  626. package/dist/skills/SkillFrontmatter.js +152 -0
  627. package/dist/skills/SkillFrontmatter.js.map +1 -0
  628. package/dist/skills/SkillInstaller.d.ts +40 -0
  629. package/dist/skills/SkillInstaller.js +117 -0
  630. package/dist/skills/SkillInstaller.js.map +1 -0
  631. package/dist/skills/SkillMdStandard.d.ts +33 -0
  632. package/dist/skills/SkillMdStandard.js +88 -0
  633. package/dist/skills/SkillMdStandard.js.map +1 -0
  634. package/dist/skills/SkillRadar.d.ts +83 -0
  635. package/dist/skills/SkillRadar.js +404 -0
  636. package/dist/skills/SkillRadar.js.map +1 -0
  637. package/dist/skills/SkillRegistry.d.ts +112 -0
  638. package/dist/skills/SkillRegistry.js +161 -0
  639. package/dist/skills/SkillRegistry.js.map +1 -0
  640. package/dist/skills/SkillRepository.d.ts +71 -0
  641. package/dist/skills/SkillRepository.js +435 -0
  642. package/dist/skills/SkillRepository.js.map +1 -0
  643. package/dist/skills/TriggerEngine.d.ts +43 -0
  644. package/dist/skills/TriggerEngine.js +142 -0
  645. package/dist/skills/TriggerEngine.js.map +1 -0
  646. package/dist/skills/coreSkills.d.ts +6 -0
  647. package/dist/skills/coreSkills.js +41 -0
  648. package/dist/skills/coreSkills.js.map +1 -0
  649. package/dist/skills/index.d.ts +10 -0
  650. package/dist/skills/index.js +12 -0
  651. package/dist/skills/index.js.map +1 -0
  652. package/dist/skills/interop/GStackInterop.d.ts +15 -0
  653. package/dist/skills/interop/GStackInterop.js +34 -0
  654. package/dist/skills/interop/GStackInterop.js.map +1 -0
  655. package/dist/skills/interop/OMCInterop.d.ts +15 -0
  656. package/dist/skills/interop/OMCInterop.js +34 -0
  657. package/dist/skills/interop/OMCInterop.js.map +1 -0
  658. package/dist/skills/routing/SkillGate.d.ts +12 -0
  659. package/dist/skills/routing/SkillGate.js +117 -0
  660. package/dist/skills/routing/SkillGate.js.map +1 -0
  661. package/dist/skills/routing/SkillPlanner.d.ts +8 -0
  662. package/dist/skills/routing/SkillPlanner.js +179 -0
  663. package/dist/skills/routing/SkillPlanner.js.map +1 -0
  664. package/dist/skills/routing/SkillPolicy.d.ts +6 -0
  665. package/dist/skills/routing/SkillPolicy.js +336 -0
  666. package/dist/skills/routing/SkillPolicy.js.map +1 -0
  667. package/dist/skills/routing/SkillRoutingTypes.d.ts +89 -0
  668. package/dist/skills/routing/SkillRoutingTypes.js +2 -0
  669. package/dist/skills/routing/SkillRoutingTypes.js.map +1 -0
  670. package/dist/skills/routing/TaskIntentClassifier.d.ts +6 -0
  671. package/dist/skills/routing/TaskIntentClassifier.js +79 -0
  672. package/dist/skills/routing/TaskIntentClassifier.js.map +1 -0
  673. package/dist/skills/routing/index.d.ts +5 -0
  674. package/dist/skills/routing/index.js +6 -0
  675. package/dist/skills/routing/index.js.map +1 -0
  676. package/dist/tasks/IssueTriageFSM.d.ts +26 -0
  677. package/dist/tasks/IssueTriageFSM.js +107 -0
  678. package/dist/tasks/IssueTriageFSM.js.map +1 -0
  679. package/dist/tasks/TaskEngine.d.ts +97 -0
  680. package/dist/tasks/TaskEngine.js +289 -0
  681. package/dist/tasks/TaskEngine.js.map +1 -0
  682. package/dist/testing/DiffTestSelector.d.ts +22 -0
  683. package/dist/testing/DiffTestSelector.js +114 -0
  684. package/dist/testing/DiffTestSelector.js.map +1 -0
  685. package/dist/testing/index.d.ts +1 -0
  686. package/dist/testing/index.js +3 -0
  687. package/dist/testing/index.js.map +1 -0
  688. package/dist/tools/CommandOutputCompressor.d.ts +28 -0
  689. package/dist/tools/CommandOutputCompressor.js +242 -0
  690. package/dist/tools/CommandOutputCompressor.js.map +1 -0
  691. package/dist/tools/CommandRunLedger.d.ts +77 -0
  692. package/dist/tools/CommandRunLedger.js +111 -0
  693. package/dist/tools/CommandRunLedger.js.map +1 -0
  694. package/dist/tools/RtkRuntime.d.ts +9 -0
  695. package/dist/tools/RtkRuntime.js +43 -0
  696. package/dist/tools/RtkRuntime.js.map +1 -0
  697. package/dist/tools/SafeCommandRunner.d.ts +16 -0
  698. package/dist/tools/SafeCommandRunner.js +83 -0
  699. package/dist/tools/SafeCommandRunner.js.map +1 -0
  700. package/dist/tools/ToolCapabilityRegistry.d.ts +51 -0
  701. package/dist/tools/ToolCapabilityRegistry.js +295 -0
  702. package/dist/tools/ToolCapabilityRegistry.js.map +1 -0
  703. package/dist/tools/ToolEvidenceGate.d.ts +39 -0
  704. package/dist/tools/ToolEvidenceGate.js +117 -0
  705. package/dist/tools/ToolEvidenceGate.js.map +1 -0
  706. package/dist/tools/ToolEvidenceStore.d.ts +58 -0
  707. package/dist/tools/ToolEvidenceStore.js +129 -0
  708. package/dist/tools/ToolEvidenceStore.js.map +1 -0
  709. package/dist/tools/ToolOrchestrator.d.ts +67 -0
  710. package/dist/tools/ToolOrchestrator.js +252 -0
  711. package/dist/tools/ToolOrchestrator.js.map +1 -0
  712. package/dist/tools/ToolPolicy.d.ts +33 -0
  713. package/dist/tools/ToolPolicy.js +172 -0
  714. package/dist/tools/ToolPolicy.js.map +1 -0
  715. package/dist/tools/index.d.ts +7 -0
  716. package/dist/tools/index.js +8 -0
  717. package/dist/tools/index.js.map +1 -0
  718. package/dist/tui/TuiDashboard.d.ts +3 -0
  719. package/dist/tui/TuiDashboard.js +120 -0
  720. package/dist/tui/TuiDashboard.js.map +1 -0
  721. package/dist/version.d.ts +3 -0
  722. package/dist/version.js +15 -0
  723. package/dist/version.js.map +1 -0
  724. package/dist/workflow/AdaptiveWorkflowRouter.d.ts +38 -0
  725. package/dist/workflow/AdaptiveWorkflowRouter.js +214 -0
  726. package/dist/workflow/AdaptiveWorkflowRouter.js.map +1 -0
  727. package/dist/workflow/CommitDiscipline.d.ts +68 -0
  728. package/dist/workflow/CommitDiscipline.js +328 -0
  729. package/dist/workflow/CommitDiscipline.js.map +1 -0
  730. package/dist/workflow/ContextGovernance.d.ts +51 -0
  731. package/dist/workflow/ContextGovernance.js +233 -0
  732. package/dist/workflow/ContextGovernance.js.map +1 -0
  733. package/dist/workflow/CrossRepoOrchestrator.d.ts +92 -0
  734. package/dist/workflow/CrossRepoOrchestrator.js +408 -0
  735. package/dist/workflow/CrossRepoOrchestrator.js.map +1 -0
  736. package/dist/workflow/DiagnosticLoop.d.ts +40 -0
  737. package/dist/workflow/DiagnosticLoop.js +105 -0
  738. package/dist/workflow/DiagnosticLoop.js.map +1 -0
  739. package/dist/workflow/EngineeringStandards.d.ts +212 -0
  740. package/dist/workflow/EngineeringStandards.js +1113 -0
  741. package/dist/workflow/EngineeringStandards.js.map +1 -0
  742. package/dist/workflow/EvidenceStore.d.ts +20 -0
  743. package/dist/workflow/EvidenceStore.js +48 -0
  744. package/dist/workflow/EvidenceStore.js.map +1 -0
  745. package/dist/workflow/EvolutionShadowPromoter.d.ts +46 -0
  746. package/dist/workflow/EvolutionShadowPromoter.js +73 -0
  747. package/dist/workflow/EvolutionShadowPromoter.js.map +1 -0
  748. package/dist/workflow/GateCatalog.d.ts +63 -0
  749. package/dist/workflow/GateCatalog.js +268 -0
  750. package/dist/workflow/GateCatalog.js.map +1 -0
  751. package/dist/workflow/GovernanceLock.d.ts +35 -0
  752. package/dist/workflow/GovernanceLock.js +58 -0
  753. package/dist/workflow/GovernanceLock.js.map +1 -0
  754. package/dist/workflow/GovernanceRoi.d.ts +52 -0
  755. package/dist/workflow/GovernanceRoi.js +204 -0
  756. package/dist/workflow/GovernanceRoi.js.map +1 -0
  757. package/dist/workflow/GovernanceTemplatePacks.d.ts +24 -0
  758. package/dist/workflow/GovernanceTemplatePacks.js +2134 -0
  759. package/dist/workflow/GovernanceTemplatePacks.js.map +1 -0
  760. package/dist/workflow/GovernanceTemplates.d.ts +19 -0
  761. package/dist/workflow/GovernanceTemplates.js +1291 -0
  762. package/dist/workflow/GovernanceTemplates.js.map +1 -0
  763. package/dist/workflow/McpGovernance.d.ts +63 -0
  764. package/dist/workflow/McpGovernance.js +198 -0
  765. package/dist/workflow/McpGovernance.js.map +1 -0
  766. package/dist/workflow/OutOfScopeStore.d.ts +37 -0
  767. package/dist/workflow/OutOfScopeStore.js +164 -0
  768. package/dist/workflow/OutOfScopeStore.js.map +1 -0
  769. package/dist/workflow/PhaseMarkerTracker.d.ts +63 -0
  770. package/dist/workflow/PhaseMarkerTracker.js +291 -0
  771. package/dist/workflow/PhaseMarkerTracker.js.map +1 -0
  772. package/dist/workflow/ResourceGovernance.d.ts +120 -0
  773. package/dist/workflow/ResourceGovernance.js +531 -0
  774. package/dist/workflow/ResourceGovernance.js.map +1 -0
  775. package/dist/workflow/ReviewAnalyzer.d.ts +80 -0
  776. package/dist/workflow/ReviewAnalyzer.js +438 -0
  777. package/dist/workflow/ReviewAnalyzer.js.map +1 -0
  778. package/dist/workflow/ReviewStore.d.ts +36 -0
  779. package/dist/workflow/ReviewStore.js +42 -0
  780. package/dist/workflow/ReviewStore.js.map +1 -0
  781. package/dist/workflow/SecurityAudit.d.ts +27 -0
  782. package/dist/workflow/SecurityAudit.js +294 -0
  783. package/dist/workflow/SecurityAudit.js.map +1 -0
  784. package/dist/workflow/SessionCoordinator.d.ts +103 -0
  785. package/dist/workflow/SessionCoordinator.js +401 -0
  786. package/dist/workflow/SessionCoordinator.js.map +1 -0
  787. package/dist/workflow/SessionPreamble.d.ts +19 -0
  788. package/dist/workflow/SessionPreamble.js +130 -0
  789. package/dist/workflow/SessionPreamble.js.map +1 -0
  790. package/dist/workflow/SessionStateTracker.d.ts +74 -0
  791. package/dist/workflow/SessionStateTracker.js +270 -0
  792. package/dist/workflow/SessionStateTracker.js.map +1 -0
  793. package/dist/workflow/ShipPipeline.d.ts +30 -0
  794. package/dist/workflow/ShipPipeline.js +366 -0
  795. package/dist/workflow/ShipPipeline.js.map +1 -0
  796. package/dist/workflow/TaskArtifactScaffolder.d.ts +69 -0
  797. package/dist/workflow/TaskArtifactScaffolder.js +333 -0
  798. package/dist/workflow/TaskArtifactScaffolder.js.map +1 -0
  799. package/dist/workflow/TaskDependencyGraph.d.ts +73 -0
  800. package/dist/workflow/TaskDependencyGraph.js +245 -0
  801. package/dist/workflow/TaskDependencyGraph.js.map +1 -0
  802. package/dist/workflow/TaskLevelDetector.d.ts +41 -0
  803. package/dist/workflow/TaskLevelDetector.js +219 -0
  804. package/dist/workflow/TaskLevelDetector.js.map +1 -0
  805. package/dist/workflow/TaskMetricsStore.d.ts +49 -0
  806. package/dist/workflow/TaskMetricsStore.js +149 -0
  807. package/dist/workflow/TaskMetricsStore.js.map +1 -0
  808. package/dist/workflow/TaskScoreEngine.d.ts +42 -0
  809. package/dist/workflow/TaskScoreEngine.js +181 -0
  810. package/dist/workflow/TaskScoreEngine.js.map +1 -0
  811. package/dist/workflow/TddLoop.d.ts +49 -0
  812. package/dist/workflow/TddLoop.js +78 -0
  813. package/dist/workflow/TddLoop.js.map +1 -0
  814. package/dist/workflow/UpgradeManager.d.ts +178 -0
  815. package/dist/workflow/UpgradeManager.js +665 -0
  816. package/dist/workflow/UpgradeManager.js.map +1 -0
  817. package/dist/workflow/VerificationCommands.d.ts +36 -0
  818. package/dist/workflow/VerificationCommands.js +123 -0
  819. package/dist/workflow/VerificationCommands.js.map +1 -0
  820. package/dist/workflow/VerificationProfile.d.ts +67 -0
  821. package/dist/workflow/VerificationProfile.js +241 -0
  822. package/dist/workflow/VerificationProfile.js.map +1 -0
  823. package/dist/workflow/VerificationSchema.d.ts +46 -0
  824. package/dist/workflow/VerificationSchema.js +97 -0
  825. package/dist/workflow/VerificationSchema.js.map +1 -0
  826. package/dist/workflow/WorkflowArtifactWriter.d.ts +113 -0
  827. package/dist/workflow/WorkflowArtifactWriter.js +242 -0
  828. package/dist/workflow/WorkflowArtifactWriter.js.map +1 -0
  829. package/dist/workflow/WorkflowEngine.d.ts +83 -0
  830. package/dist/workflow/WorkflowEngine.js +183 -0
  831. package/dist/workflow/WorkflowEngine.js.map +1 -0
  832. package/dist/workflow/WorkflowGuidance.d.ts +30 -0
  833. package/dist/workflow/WorkflowGuidance.js +204 -0
  834. package/dist/workflow/WorkflowGuidance.js.map +1 -0
  835. package/dist/workflow/WorkflowOpenTasks.d.ts +16 -0
  836. package/dist/workflow/WorkflowOpenTasks.js +37 -0
  837. package/dist/workflow/WorkflowOpenTasks.js.map +1 -0
  838. package/dist/workflow/WorkflowOrchestrator.d.ts +59 -0
  839. package/dist/workflow/WorkflowOrchestrator.js +326 -0
  840. package/dist/workflow/WorkflowOrchestrator.js.map +1 -0
  841. package/dist/workflow/WorkflowTemplates.d.ts +38 -0
  842. package/dist/workflow/WorkflowTemplates.js +371 -0
  843. package/dist/workflow/WorkflowTemplates.js.map +1 -0
  844. package/dist/workflow/WorkspaceLifecycle.d.ts +71 -0
  845. package/dist/workflow/WorkspaceLifecycle.js +401 -0
  846. package/dist/workflow/WorkspaceLifecycle.js.map +1 -0
  847. package/dist/workflow/WorkspacePolicy.d.ts +46 -0
  848. package/dist/workflow/WorkspacePolicy.js +141 -0
  849. package/dist/workflow/WorkspacePolicy.js.map +1 -0
  850. package/dist/workflow/WorkspaceSafety.d.ts +9 -0
  851. package/dist/workflow/WorkspaceSafety.js +49 -0
  852. package/dist/workflow/WorkspaceSafety.js.map +1 -0
  853. package/dist/workflow/WorkspaceTopology.d.ts +58 -0
  854. package/dist/workflow/WorkspaceTopology.js +176 -0
  855. package/dist/workflow/WorkspaceTopology.js.map +1 -0
  856. package/dist/workflow/autofix/AutoFixEngine.d.ts +37 -0
  857. package/dist/workflow/autofix/AutoFixEngine.js +169 -0
  858. package/dist/workflow/autofix/AutoFixEngine.js.map +1 -0
  859. package/dist/workflow/autonomous/AutonomousDevLoop.d.ts +88 -0
  860. package/dist/workflow/autonomous/AutonomousDevLoop.js +381 -0
  861. package/dist/workflow/autonomous/AutonomousDevLoop.js.map +1 -0
  862. package/dist/workflow/autonomous/BackgroundHunter.d.ts +74 -0
  863. package/dist/workflow/autonomous/BackgroundHunter.js +220 -0
  864. package/dist/workflow/autonomous/BackgroundHunter.js.map +1 -0
  865. package/dist/workflow/autonomous/WorklogManager.d.ts +50 -0
  866. package/dist/workflow/autonomous/WorklogManager.js +264 -0
  867. package/dist/workflow/autonomous/WorklogManager.js.map +1 -0
  868. package/dist/workflow/autonomous/index.d.ts +3 -0
  869. package/dist/workflow/autonomous/index.js +5 -0
  870. package/dist/workflow/autonomous/index.js.map +1 -0
  871. package/dist/workflow/cognitive/AmbiguityScorer.d.ts +17 -0
  872. package/dist/workflow/cognitive/AmbiguityScorer.js +107 -0
  873. package/dist/workflow/cognitive/AmbiguityScorer.js.map +1 -0
  874. package/dist/workflow/cognitive/ConsensusPlanner.d.ts +26 -0
  875. package/dist/workflow/cognitive/ConsensusPlanner.js +141 -0
  876. package/dist/workflow/cognitive/ConsensusPlanner.js.map +1 -0
  877. package/dist/workflow/cognitive/SocraticQuestioner.d.ts +33 -0
  878. package/dist/workflow/cognitive/SocraticQuestioner.js +276 -0
  879. package/dist/workflow/cognitive/SocraticQuestioner.js.map +1 -0
  880. package/dist/workflow/evolution/LessonExtractor.d.ts +90 -0
  881. package/dist/workflow/evolution/LessonExtractor.js +317 -0
  882. package/dist/workflow/evolution/LessonExtractor.js.map +1 -0
  883. package/dist/workflow/evolution/SelfImproveEngine.d.ts +156 -0
  884. package/dist/workflow/evolution/SelfImproveEngine.js +361 -0
  885. package/dist/workflow/evolution/SelfImproveEngine.js.map +1 -0
  886. package/dist/workflow/execution/RalphEngine.d.ts +54 -0
  887. package/dist/workflow/execution/RalphEngine.js +145 -0
  888. package/dist/workflow/execution/RalphEngine.js.map +1 -0
  889. package/dist/workflow/execution/UltraworkEngine.d.ts +43 -0
  890. package/dist/workflow/execution/UltraworkEngine.js +135 -0
  891. package/dist/workflow/execution/UltraworkEngine.js.map +1 -0
  892. package/dist/workflow/gates/EnhancedGates.d.ts +74 -0
  893. package/dist/workflow/gates/EnhancedGates.js +653 -0
  894. package/dist/workflow/gates/EnhancedGates.js.map +1 -0
  895. package/dist/workflow/gates/GateSystem.d.ts +180 -0
  896. package/dist/workflow/gates/GateSystem.js +1279 -0
  897. package/dist/workflow/gates/GateSystem.js.map +1 -0
  898. package/dist/workflow/gates/MetaGovernanceGates.d.ts +70 -0
  899. package/dist/workflow/gates/MetaGovernanceGates.js +617 -0
  900. package/dist/workflow/gates/MetaGovernanceGates.js.map +1 -0
  901. package/dist/workflow/gates/VisualGate.d.ts +41 -0
  902. package/dist/workflow/gates/VisualGate.js +174 -0
  903. package/dist/workflow/gates/VisualGate.js.map +1 -0
  904. package/dist/workflow/index.d.ts +45 -0
  905. package/dist/workflow/index.js +47 -0
  906. package/dist/workflow/index.js.map +1 -0
  907. package/dist/workflow/qa/E2ETestRunner.d.ts +102 -0
  908. package/dist/workflow/qa/E2ETestRunner.js +227 -0
  909. package/dist/workflow/qa/E2ETestRunner.js.map +1 -0
  910. package/dist/workflow/quality/HonestDelivery.d.ts +19 -0
  911. package/dist/workflow/quality/HonestDelivery.js +77 -0
  912. package/dist/workflow/quality/HonestDelivery.js.map +1 -0
  913. package/dist/workflow/quality/KarpathyEvaluator.d.ts +18 -0
  914. package/dist/workflow/quality/KarpathyEvaluator.js +76 -0
  915. package/dist/workflow/quality/KarpathyEvaluator.js.map +1 -0
  916. package/dist/workflow/types.d.ts +151 -0
  917. package/dist/workflow/types.js +4 -0
  918. package/dist/workflow/types.js.map +1 -0
  919. package/dist/workflows/DAGBuilder.d.ts +52 -0
  920. package/dist/workflows/DAGBuilder.js +169 -0
  921. package/dist/workflows/DAGBuilder.js.map +1 -0
  922. package/dist/workflows/GateParser.d.ts +55 -0
  923. package/dist/workflows/GateParser.js +73 -0
  924. package/dist/workflows/GateParser.js.map +1 -0
  925. package/dist/workflows/WorkflowExecutor.d.ts +56 -0
  926. package/dist/workflows/WorkflowExecutor.js +143 -0
  927. package/dist/workflows/WorkflowExecutor.js.map +1 -0
  928. package/dist/workflows/WorkflowOrchestrator.d.ts +81 -0
  929. package/dist/workflows/WorkflowOrchestrator.js +337 -0
  930. package/dist/workflows/WorkflowOrchestrator.js.map +1 -0
  931. package/dist/workflows/index.d.ts +2 -0
  932. package/dist/workflows/index.js +5 -0
  933. package/dist/workflows/index.js.map +1 -0
  934. package/dist/workflows/presets.d.ts +34 -0
  935. package/dist/workflows/presets.js +224 -0
  936. package/dist/workflows/presets.js.map +1 -0
  937. package/docs/README.md +105 -0
  938. package/docs/guides/DEVELOPMENT_WORKFLOW.md +99 -0
  939. package/docs/guides/GETTING_STARTED.md +93 -0
  940. package/docs/guides/MEDICAL_AGENT_OPERATING_GUIDE.md +61 -0
  941. package/docs/guides/MEDICAL_RESEARCH_DELIVERY.md +217 -0
  942. package/docs/guides/MIGRATION.md +119 -0
  943. package/docs/reference/cli.md +2921 -0
  944. package/docs/start/README.md +79 -0
  945. package/docs/start/agent-governance-demo.md +107 -0
  946. package/docs/start/artifact-lifecycle.md +326 -0
  947. package/docs/start/quickstart.md +191 -0
  948. package/docs/start/workflow-upgrade.md +198 -0
  949. package/docs/workflow/GATES_AND_SCORE.md +89 -0
  950. package/docs/workflow/PROMPT_OPTIMIZATION.md +44 -0
  951. package/docs/workflow/README.md +123 -0
  952. package/docs/workflow/node-library.md +52 -0
  953. package/docs/workflow/templates/api-contract.md +29 -0
  954. package/docs/workflow/templates/architecture-review.md +23 -0
  955. package/docs/workflow/templates/db-change-plan.md +20 -0
  956. package/docs/workflow/templates/docs-impact.md +17 -0
  957. package/docs/workflow/templates/e2e-plan.md +20 -0
  958. package/docs/workflow/templates/explore.md +16 -0
  959. package/docs/workflow/templates/github-actions-scale-preflight.yml +32 -0
  960. package/docs/workflow/templates/mini-prd.md +16 -0
  961. package/docs/workflow/templates/plan.md +37 -0
  962. package/docs/workflow/templates/pre-push-scale-preflight.sh +8 -0
  963. package/docs/workflow/templates/product-smoke.md +61 -0
  964. package/docs/workflow/templates/reality-check.md +28 -0
  965. package/docs/workflow/templates/resource-cleanup.md +17 -0
  966. package/docs/workflow/templates/resource-impact.md +25 -0
  967. package/docs/workflow/templates/review.md +12 -0
  968. package/docs/workflow/templates/runtime.md +23 -0
  969. package/docs/workflow/templates/security-review.md +26 -0
  970. package/docs/workflow/templates/skill-evidence.md +33 -0
  971. package/docs/workflow/templates/skill-plan.md +39 -0
  972. package/docs/workflow/templates/spec.md +17 -0
  973. package/docs/workflow/templates/standards-impact.md +28 -0
  974. package/docs/workflow/templates/summary.md +16 -0
  975. package/docs/workflow/templates/tasks.md +8 -0
  976. package/docs/workflow/templates/ui-spec.md +29 -0
  977. package/docs/workflow/templates/verification.md +20 -0
  978. package/docs/workflow/templates/visual-review.md +20 -0
  979. package/docs/zh/quickstart.md +108 -0
  980. package/examples/demo-projects/agent-governance-demo/CONTEXT.md +14 -0
  981. package/examples/demo-projects/agent-governance-demo/README.md +48 -0
  982. package/examples/demo-projects/agent-governance-demo/docs/CONTEXT-MAP.md +14 -0
  983. package/examples/demo-projects/agent-governance-demo/package.json +22 -0
  984. package/examples/demo-projects/agent-governance-demo/src/oauth-state.ts +39 -0
  985. package/examples/demo-projects/agent-governance-demo/tests/oauth-state.test.ts +52 -0
  986. package/mcp-configs/_INDEX.md +55 -0
  987. package/mcp-configs/context7/config.json +9 -0
  988. package/mcp-configs/fetch/config.json +9 -0
  989. package/mcp-configs/filesystem/config.json +9 -0
  990. package/mcp-configs/github/config.json +11 -0
  991. package/mcp-configs/memory/config.json +9 -0
  992. package/mcp-configs/neon/config.json +11 -0
  993. package/mcp-configs/playwright/config.json +9 -0
  994. package/mcp-configs/postgres/config.json +11 -0
  995. package/mcp-configs/puppeteer/config.json +9 -0
  996. package/mcp-configs/sequential-thinking/config.json +9 -0
  997. package/package.json +113 -0
  998. package/scripts/workflow/lib/gbrain-runtime.mjs +185 -0
  999. package/scripts/workflow/lib/report-output.mjs +107 -0
  1000. package/scripts/workflow/medscale-release-smoke.mjs +338 -0
  1001. package/scripts/workflow/provider-rehearsal.mjs +597 -0
  1002. package/scripts/workflow/setup-smoke.mjs +433 -0
  1003. package/target-research-platform/bridge_runner.py +310 -0
  1004. package/target-research-platform/config.yaml +148 -0
  1005. package/target-research-platform/data/immune_infiltration/ACC.csv +201 -0
  1006. package/target-research-platform/data/immune_infiltration/BLCA.csv +201 -0
  1007. package/target-research-platform/data/immune_infiltration/BRCA.csv +201 -0
  1008. package/target-research-platform/data/immune_infiltration/CESC.csv +201 -0
  1009. package/target-research-platform/data/immune_infiltration/CHOL.csv +201 -0
  1010. package/target-research-platform/data/immune_infiltration/COAD.csv +201 -0
  1011. package/target-research-platform/data/immune_infiltration/DLBC.csv +201 -0
  1012. package/target-research-platform/data/immune_infiltration/ESCA.csv +201 -0
  1013. package/target-research-platform/data/immune_infiltration/GBM.csv +201 -0
  1014. package/target-research-platform/data/immune_infiltration/HNSC.csv +201 -0
  1015. package/target-research-platform/data/immune_infiltration/KICH.csv +201 -0
  1016. package/target-research-platform/data/immune_infiltration/KIRC.csv +201 -0
  1017. package/target-research-platform/data/immune_infiltration/KIRP.csv +201 -0
  1018. package/target-research-platform/data/immune_infiltration/LAML.csv +201 -0
  1019. package/target-research-platform/data/immune_infiltration/LGG.csv +201 -0
  1020. package/target-research-platform/data/immune_infiltration/LIHC.csv +201 -0
  1021. package/target-research-platform/data/immune_infiltration/LUAD.csv +201 -0
  1022. package/target-research-platform/data/immune_infiltration/LUSC.csv +201 -0
  1023. package/target-research-platform/data/immune_infiltration/MESO.csv +201 -0
  1024. package/target-research-platform/data/immune_infiltration/OV.csv +201 -0
  1025. package/target-research-platform/data/immune_infiltration/PAAD.csv +201 -0
  1026. package/target-research-platform/data/immune_infiltration/PCPG.csv +201 -0
  1027. package/target-research-platform/data/immune_infiltration/PRAD.csv +201 -0
  1028. package/target-research-platform/data/immune_infiltration/READ.csv +201 -0
  1029. package/target-research-platform/data/immune_infiltration/SARC.csv +201 -0
  1030. package/target-research-platform/data/immune_infiltration/SKCM.csv +201 -0
  1031. package/target-research-platform/data/immune_infiltration/STAD.csv +201 -0
  1032. package/target-research-platform/data/immune_infiltration/TGCT.csv +201 -0
  1033. package/target-research-platform/data/immune_infiltration/THCA.csv +201 -0
  1034. package/target-research-platform/data/immune_infiltration/THYM.csv +201 -0
  1035. package/target-research-platform/data/immune_infiltration/UCEC.csv +201 -0
  1036. package/target-research-platform/data/immune_infiltration/UCS.csv +201 -0
  1037. package/target-research-platform/data/immune_infiltration/UVM.csv +201 -0
  1038. package/target-research-platform/docs/JSON_SCHEMA.md +352 -0
  1039. package/target-research-platform/docs/PROGRESS_2026-06-09.md +140 -0
  1040. package/target-research-platform/main.py +755 -0
  1041. package/target-research-platform/pyproject.toml +54 -0
  1042. package/target-research-platform/requirements.txt +9 -0
  1043. package/target-research-platform/run_dashboard.py +5 -0
  1044. package/target-research-platform/run_real_medical_workflow.py +28 -0
  1045. package/target-research-platform/scripts/demo_report.py +481 -0
  1046. package/target-research-platform/scripts/generate_evidence_package.py +75 -0
  1047. package/target-research-platform/scripts/prepare_immune_data.py +386 -0
  1048. package/target-research-platform/src/__init__.py +4 -0
  1049. package/target-research-platform/src/analysis/__init__.py +3 -0
  1050. package/target-research-platform/src/analysis/stage1_expression/__init__.py +12 -0
  1051. package/target-research-platform/src/analysis/stage1_expression/immune_correlation.py +366 -0
  1052. package/target-research-platform/src/analysis/stage1_expression/pipeline.py +579 -0
  1053. package/target-research-platform/src/analysis/stage1_expression/survival_analysis.py +382 -0
  1054. package/target-research-platform/src/analysis/stage2_screening/__init__.py +12 -0
  1055. package/target-research-platform/src/analysis/stage2_screening/differential_expression.py +451 -0
  1056. package/target-research-platform/src/analysis/stage2_screening/druggability_score.py +477 -0
  1057. package/target-research-platform/src/analysis/stage2_screening/pipeline.py +822 -0
  1058. package/target-research-platform/src/analysis/stage3_deep_research/__init__.py +12 -0
  1059. package/target-research-platform/src/analysis/stage3_deep_research/competitive_landscape.py +479 -0
  1060. package/target-research-platform/src/analysis/stage3_deep_research/pipeline.py +763 -0
  1061. package/target-research-platform/src/analysis/stage3_deep_research/target_function.py +290 -0
  1062. package/target-research-platform/src/analysis/stage4_business/__init__.py +12 -0
  1063. package/target-research-platform/src/analysis/stage4_business/business_plan.py +816 -0
  1064. package/target-research-platform/src/analysis/stage4_business/milestone_planner.py +844 -0
  1065. package/target-research-platform/src/analysis/stage4_business/pipeline.py +284 -0
  1066. package/target-research-platform/src/api_clients/__init__.py +29 -0
  1067. package/target-research-platform/src/api_clients/aminer_client.py +163 -0
  1068. package/target-research-platform/src/api_clients/base_client.py +186 -0
  1069. package/target-research-platform/src/api_clients/clinicaltrials_client.py +411 -0
  1070. package/target-research-platform/src/api_clients/geo_client.py +1420 -0
  1071. package/target-research-platform/src/api_clients/gtex_client.py +209 -0
  1072. package/target-research-platform/src/api_clients/hpa_client.py +170 -0
  1073. package/target-research-platform/src/api_clients/immune_data_manager.py +247 -0
  1074. package/target-research-platform/src/api_clients/openalex_client.py +86 -0
  1075. package/target-research-platform/src/api_clients/opentargets_client.py +558 -0
  1076. package/target-research-platform/src/api_clients/pubmed_client.py +361 -0
  1077. package/target-research-platform/src/api_clients/tcga_client.py +712 -0
  1078. package/target-research-platform/src/api_clients/timer_client.py +169 -0
  1079. package/target-research-platform/src/dashboard/app.py +2283 -0
  1080. package/target-research-platform/src/dashboard/deliverables.py +710 -0
  1081. package/target-research-platform/src/dashboard/static/artifactPreview.js +96 -0
  1082. package/target-research-platform/src/dashboard/static/index.html +1292 -0
  1083. package/target-research-platform/src/dashboard/status_tracker.py +237 -0
  1084. package/target-research-platform/src/output/__init__.py +42 -0
  1085. package/target-research-platform/src/output/agent_llm_provider.py +171 -0
  1086. package/target-research-platform/src/output/chart_generator.py +550 -0
  1087. package/target-research-platform/src/output/data_exporter.py +215 -0
  1088. package/target-research-platform/src/output/delivery_packager.py +791 -0
  1089. package/target-research-platform/src/output/evidence_package.py +230 -0
  1090. package/target-research-platform/src/output/journal_templates.py +193 -0
  1091. package/target-research-platform/src/output/literature_enricher.py +395 -0
  1092. package/target-research-platform/src/output/literature_reviewer.py +420 -0
  1093. package/target-research-platform/src/output/manuscript_fact_checker.py +279 -0
  1094. package/target-research-platform/src/output/manuscript_generator.py +1189 -0
  1095. package/target-research-platform/src/output/manuscript_quality.py +401 -0
  1096. package/target-research-platform/src/output/medical_skills_bridge.py +140 -0
  1097. package/target-research-platform/src/output/report_generator.py +542 -0
  1098. package/target-research-platform/src/output/usage_envelope.py +193 -0
  1099. package/target-research-platform/src/utils/__init__.py +1 -0
  1100. package/target-research-platform/src/utils/config.py +125 -0
  1101. package/target-research-platform/src/utils/logger.py +71 -0
  1102. package/target-research-platform/src/validators/__init__.py +13 -0
  1103. package/target-research-platform/src/validators/cross_validator.py +394 -0
  1104. package/target-research-platform/src/validators/data_provenance.py +298 -0
@@ -0,0 +1 @@
1
+ {"version":3,"file":"BenchmarkPublisher.js","sourceRoot":"","sources":["../../src/eval/BenchmarkPublisher.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,UAAU,EAAE,MAAM,SAAS,CAAA;AAC9D,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAA;AA0BhC,MAAM,UAAU,gBAAgB,CAAC,IAAmB,EAAE,YAAoB,mBAAmB;IAC3F,IAAI,CAAC,UAAU,CAAC,SAAS,CAAC;QAAE,SAAS,CAAC,SAAS,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAA;IACrE,MAAM,QAAQ,GAAG,aAAa,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,OAAO,EAAE,GAAG,CAAC,OAAO,CAAA;IACzF,MAAM,IAAI,GAAG,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,CAAA;IACtC,aAAa,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,IAAI,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAA;IAClD,OAAO,IAAI,CAAA;AACb,CAAC;AAED,MAAM,UAAU,sBAAsB,CAAC,OAAe;IACpD,OAAO;QACL,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;QACnC,OAAO;QACP,OAAO,EAAE;YACP,OAAO,EAAE,CAAC;YACV,OAAO,EAAE,CAAC;YACV,UAAU,EAAE,CAAC;YACb,aAAa,EAAE,CAAC;YAChB,SAAS,EAAE,CAAC;YACZ,UAAU,EAAE,CAAC;SACd;QACD,UAAU,EAAE,EAAE;QACd,MAAM,EAAE,EAAE;KACX,CAAA;AACH,CAAC"}
@@ -0,0 +1,161 @@
1
+ export type WorkflowEvalCaseType = 'bugfix' | 'feature' | 'refactor' | 'security' | 'frontend' | 'release' | 'resource';
2
+ export type FailureReplayCategory = 'wrong-exploration-path' | 'hallucinated-project-fact' | 'missing-codegraph-or-graph-fallback' | 'over-broad-context-load' | 'bad-skill-recommendation' | 'missing-verification-evidence' | 'failed-security-or-resource-gate' | 'human-correction-after-agent-confidence' | 'command-failure' | 'unknown';
3
+ export interface WorkflowEvalAttempt {
4
+ id?: string;
5
+ command: string;
6
+ expectedExitCode?: number;
7
+ outputContains?: string;
8
+ timeoutMs?: number;
9
+ }
10
+ export interface WorkflowEvalCase {
11
+ id: string;
12
+ type: WorkflowEvalCaseType;
13
+ title: string;
14
+ task: string;
15
+ phase?: string;
16
+ successCriteria?: string[];
17
+ attempts: WorkflowEvalAttempt[];
18
+ expectedFailureCategory?: FailureReplayCategory;
19
+ humanCorrections?: number;
20
+ estimatedContextTokens?: number;
21
+ }
22
+ export interface WorkflowEvalSuite {
23
+ version: string;
24
+ id: string;
25
+ name: string;
26
+ cases: WorkflowEvalCase[];
27
+ }
28
+ export interface WorkflowEvalAttemptResult {
29
+ id: string;
30
+ command: string;
31
+ expectedExitCode: number;
32
+ exitCode: number;
33
+ passed: boolean;
34
+ durationMs: number;
35
+ outputSummary: string;
36
+ redactionApplied: boolean;
37
+ }
38
+ export interface WorkflowEvalCaseResult {
39
+ id: string;
40
+ type: WorkflowEvalCaseType;
41
+ title: string;
42
+ task: string;
43
+ passed: boolean;
44
+ passAt1: boolean;
45
+ passAt3: boolean;
46
+ fixIterations: number;
47
+ humanCorrections: number;
48
+ estimatedTokens: number;
49
+ toolCalls: number;
50
+ attempts: WorkflowEvalAttemptResult[];
51
+ failureReplayIds: string[];
52
+ }
53
+ export interface WorkflowEvalMetrics {
54
+ total: number;
55
+ passed: number;
56
+ failed: number;
57
+ passAt1: number;
58
+ passAt3: number;
59
+ passAt1Rate: number;
60
+ passAt3Rate: number;
61
+ averageFixIterations: number;
62
+ totalToolCalls: number;
63
+ estimatedTokens: number;
64
+ humanCorrections: number;
65
+ failureReplayCount: number;
66
+ }
67
+ export interface WorkflowEvalRun {
68
+ id: string;
69
+ suiteId: string;
70
+ generatedAt: string;
71
+ projectDir: string;
72
+ ok: boolean;
73
+ cases: WorkflowEvalCaseResult[];
74
+ metrics: WorkflowEvalMetrics;
75
+ failureReplayIds: string[];
76
+ }
77
+ export interface FailureReplayRecord {
78
+ id: string;
79
+ taskId: string;
80
+ suiteId: string;
81
+ caseId: string;
82
+ generatedAt: string;
83
+ category: FailureReplayCategory;
84
+ phase: string;
85
+ task: string;
86
+ wrongTurn: string;
87
+ evidence: string;
88
+ correction: string;
89
+ prevention: string;
90
+ replayCommand?: string;
91
+ status: 'open' | 'promoted' | 'accepted-risk' | 'closed';
92
+ redactionApplied: boolean;
93
+ }
94
+ export interface FailureImprovementCandidate {
95
+ id: string;
96
+ failureId: string;
97
+ createdAt: string;
98
+ category: FailureReplayCategory;
99
+ title: string;
100
+ recommendation: string;
101
+ evidencePath: string;
102
+ status: 'candidate';
103
+ }
104
+ export interface WorkflowEvalComparison {
105
+ baseline: Pick<WorkflowEvalRun, 'id' | 'suiteId' | 'metrics'>;
106
+ candidate: Pick<WorkflowEvalRun, 'id' | 'suiteId' | 'metrics'>;
107
+ delta: {
108
+ passAt1Rate: number;
109
+ passAt3Rate: number;
110
+ averageFixIterations: number;
111
+ totalToolCalls: number;
112
+ estimatedTokens: number;
113
+ humanCorrections: number;
114
+ };
115
+ recommendation: 'improved' | 'regressed' | 'mixed' | 'same';
116
+ }
117
+ export interface WorkflowEvalStoreOptions {
118
+ projectDir?: string;
119
+ scaleDir?: string;
120
+ }
121
+ export declare function defaultWorkflowEvalSuite(): WorkflowEvalSuite;
122
+ export declare class WorkflowEvalStore {
123
+ readonly projectDir: string;
124
+ readonly scaleRoot: string;
125
+ readonly evalRoot: string;
126
+ readonly suitesDir: string;
127
+ readonly runsDir: string;
128
+ readonly failuresDir: string;
129
+ readonly improvementsDir: string;
130
+ constructor(options?: WorkflowEvalStoreOptions);
131
+ initSuite(suiteId?: string, force?: boolean): {
132
+ path: string;
133
+ written: boolean;
134
+ suite: WorkflowEvalSuite;
135
+ };
136
+ loadSuite(suiteIdOrPath?: string): WorkflowEvalSuite;
137
+ saveRun(run: WorkflowEvalRun): string;
138
+ saveFailure(record: FailureReplayRecord): string;
139
+ listFailures(query?: {
140
+ taskId?: string;
141
+ sinceDays?: number;
142
+ }): FailureReplayRecord[];
143
+ getFailure(id: string): FailureReplayRecord | null;
144
+ loadRun(idOrPath: string): WorkflowEvalRun;
145
+ promoteFailure(id: string): FailureImprovementCandidate;
146
+ suitePath(suiteId: string): string;
147
+ private resolveSuitePath;
148
+ private resolveRunPath;
149
+ }
150
+ export declare function runWorkflowEvalSuite(options?: WorkflowEvalStoreOptions & {
151
+ suite?: string;
152
+ }): Promise<{
153
+ run: WorkflowEvalRun;
154
+ runPath: string;
155
+ failurePaths: string[];
156
+ }>;
157
+ export declare function compareWorkflowEvalRuns(options: WorkflowEvalStoreOptions & {
158
+ baseline: string;
159
+ candidate: string;
160
+ }): WorkflowEvalComparison;
161
+ export declare function renderWorkflowEvalReport(run: WorkflowEvalRun): string;
@@ -0,0 +1,377 @@
1
+ import { randomUUID } from 'node:crypto';
2
+ import { existsSync, mkdirSync, readFileSync, readdirSync, writeFileSync } from 'node:fs';
3
+ import { basename, dirname, isAbsolute, join, resolve } from 'node:path';
4
+ import { estimateTokens } from '../context/ContextBudget.js';
5
+ import { redactEvidenceText, redactEvidenceValue } from '../tools/ToolEvidenceStore.js';
6
+ import { runSafeCommand } from '../tools/SafeCommandRunner.js';
7
+ export function defaultWorkflowEvalSuite() {
8
+ return {
9
+ version: '1.0',
10
+ id: 'workflow-baseline',
11
+ name: 'SCALE workflow baseline',
12
+ cases: [
13
+ {
14
+ id: 'governance-command-smoke',
15
+ type: 'bugfix',
16
+ title: 'Command evidence smoke',
17
+ task: 'Verify that a local command can produce concrete eval evidence.',
18
+ phase: 'verify',
19
+ successCriteria: ['command exits 0', 'output contains scale-eval-ok'],
20
+ attempts: [
21
+ {
22
+ id: 'attempt-1',
23
+ command: 'node -e "console.log(\'scale-eval-ok\')"',
24
+ expectedExitCode: 0,
25
+ outputContains: 'scale-eval-ok',
26
+ },
27
+ ],
28
+ },
29
+ ],
30
+ };
31
+ }
32
+ export class WorkflowEvalStore {
33
+ constructor(options = {}) {
34
+ this.projectDir = resolve(options.projectDir ?? process.cwd());
35
+ this.scaleRoot = isAbsolute(options.scaleDir ?? '')
36
+ ? options.scaleDir
37
+ : join(this.projectDir, options.scaleDir ?? '.scale');
38
+ this.evalRoot = join(this.scaleRoot, 'evals');
39
+ this.suitesDir = join(this.evalRoot, 'suites');
40
+ this.runsDir = join(this.evalRoot, 'runs');
41
+ this.failuresDir = join(this.evalRoot, 'failures');
42
+ this.improvementsDir = join(this.evalRoot, 'improvements');
43
+ }
44
+ initSuite(suiteId = 'workflow-baseline', force = false) {
45
+ const suite = { ...defaultWorkflowEvalSuite(), id: suiteId };
46
+ const path = this.suitePath(suiteId);
47
+ if (existsSync(path) && !force)
48
+ return { path, written: false, suite: this.loadSuite(suiteId) };
49
+ mkdirSync(dirname(path), { recursive: true });
50
+ writeFileSync(path, JSON.stringify(suite, null, 2), 'utf-8');
51
+ return { path, written: true, suite };
52
+ }
53
+ loadSuite(suiteIdOrPath = 'workflow-baseline') {
54
+ const path = this.resolveSuitePath(suiteIdOrPath);
55
+ if (!existsSync(path))
56
+ return defaultWorkflowEvalSuite();
57
+ return JSON.parse(stripBom(readFileSync(path, 'utf-8')));
58
+ }
59
+ saveRun(run) {
60
+ mkdirSync(this.runsDir, { recursive: true });
61
+ const path = join(this.runsDir, `${safeSegment(run.id)}.json`);
62
+ writeFileSync(path, JSON.stringify(run, null, 2), 'utf-8');
63
+ return path;
64
+ }
65
+ saveFailure(record) {
66
+ mkdirSync(this.failuresDir, { recursive: true });
67
+ const path = join(this.failuresDir, `${safeSegment(record.id)}.json`);
68
+ writeFileSync(path, JSON.stringify(record, null, 2), 'utf-8');
69
+ return path;
70
+ }
71
+ listFailures(query = {}) {
72
+ if (!existsSync(this.failuresDir))
73
+ return [];
74
+ const since = query.sinceDays ? Date.now() - query.sinceDays * 24 * 60 * 60 * 1000 : 0;
75
+ return readdirSync(this.failuresDir)
76
+ .filter(file => file.endsWith('.json'))
77
+ .map(file => readJson(join(this.failuresDir, file)))
78
+ .filter((record) => Boolean(record))
79
+ .filter(record => !query.taskId || record.taskId === query.taskId)
80
+ .filter(record => !since || Date.parse(record.generatedAt) >= since)
81
+ .sort((a, b) => Date.parse(b.generatedAt) - Date.parse(a.generatedAt));
82
+ }
83
+ getFailure(id) {
84
+ return readJson(join(this.failuresDir, `${safeSegment(id)}.json`));
85
+ }
86
+ loadRun(idOrPath) {
87
+ const path = this.resolveRunPath(idOrPath);
88
+ const run = readJson(path);
89
+ if (!run)
90
+ throw new Error(`Eval run not found: ${idOrPath}`);
91
+ return run;
92
+ }
93
+ promoteFailure(id) {
94
+ const failure = this.getFailure(id);
95
+ if (!failure)
96
+ throw new Error(`Failure replay not found: ${id}`);
97
+ mkdirSync(this.improvementsDir, { recursive: true });
98
+ const candidate = {
99
+ id: `IMPROVE-${Date.now()}-${randomUUID().slice(0, 8)}`,
100
+ failureId: failure.id,
101
+ createdAt: new Date().toISOString(),
102
+ category: failure.category,
103
+ title: `Prevent ${failure.category} in ${failure.caseId}`,
104
+ recommendation: failure.prevention,
105
+ evidencePath: join(this.failuresDir, `${safeSegment(failure.id)}.json`),
106
+ status: 'candidate',
107
+ };
108
+ writeFileSync(join(this.improvementsDir, `${safeSegment(candidate.id)}.json`), JSON.stringify(candidate, null, 2), 'utf-8');
109
+ this.saveFailure({ ...failure, status: 'promoted' });
110
+ return candidate;
111
+ }
112
+ suitePath(suiteId) {
113
+ return join(this.suitesDir, `${safeSegment(suiteId)}.json`);
114
+ }
115
+ resolveSuitePath(suiteIdOrPath) {
116
+ if (suiteIdOrPath.endsWith('.json'))
117
+ return isAbsolute(suiteIdOrPath) ? suiteIdOrPath : resolve(this.projectDir, suiteIdOrPath);
118
+ return this.suitePath(suiteIdOrPath);
119
+ }
120
+ resolveRunPath(idOrPath) {
121
+ if (idOrPath.endsWith('.json'))
122
+ return isAbsolute(idOrPath) ? idOrPath : resolve(this.projectDir, idOrPath);
123
+ return join(this.runsDir, `${safeSegment(idOrPath)}.json`);
124
+ }
125
+ }
126
+ export async function runWorkflowEvalSuite(options = {}) {
127
+ const store = new WorkflowEvalStore(options);
128
+ const suite = store.loadSuite(options.suite ?? 'workflow-baseline');
129
+ const caseResults = [];
130
+ const failurePaths = [];
131
+ const runId = `EVAL-${Date.now()}-${randomUUID().slice(0, 8)}`;
132
+ for (const item of suite.cases) {
133
+ const result = await runEvalCase(store, suite.id, item);
134
+ caseResults.push(result.caseResult);
135
+ failurePaths.push(...result.failurePaths);
136
+ }
137
+ const failureReplayIds = caseResults.flatMap(result => result.failureReplayIds);
138
+ const run = {
139
+ id: runId,
140
+ suiteId: suite.id,
141
+ generatedAt: new Date().toISOString(),
142
+ projectDir: store.projectDir,
143
+ ok: caseResults.every(result => result.passed),
144
+ cases: caseResults,
145
+ metrics: summarizeEval(caseResults),
146
+ failureReplayIds,
147
+ };
148
+ const runPath = store.saveRun(run);
149
+ return { run, runPath, failurePaths };
150
+ }
151
+ export function compareWorkflowEvalRuns(options) {
152
+ const store = new WorkflowEvalStore(options);
153
+ const baseline = store.loadRun(options.baseline);
154
+ const candidate = store.loadRun(options.candidate);
155
+ const delta = {
156
+ passAt1Rate: candidate.metrics.passAt1Rate - baseline.metrics.passAt1Rate,
157
+ passAt3Rate: candidate.metrics.passAt3Rate - baseline.metrics.passAt3Rate,
158
+ averageFixIterations: candidate.metrics.averageFixIterations - baseline.metrics.averageFixIterations,
159
+ totalToolCalls: candidate.metrics.totalToolCalls - baseline.metrics.totalToolCalls,
160
+ estimatedTokens: candidate.metrics.estimatedTokens - baseline.metrics.estimatedTokens,
161
+ humanCorrections: candidate.metrics.humanCorrections - baseline.metrics.humanCorrections,
162
+ };
163
+ return {
164
+ baseline: pickRun(baseline),
165
+ candidate: pickRun(candidate),
166
+ delta,
167
+ recommendation: comparisonRecommendation(delta),
168
+ };
169
+ }
170
+ export function renderWorkflowEvalReport(run) {
171
+ const rows = run.cases.map(item => [
172
+ item.id,
173
+ item.type,
174
+ item.passed ? 'pass' : 'fail',
175
+ item.passAt1 ? 'yes' : 'no',
176
+ item.passAt3 ? 'yes' : 'no',
177
+ String(item.fixIterations),
178
+ String(item.toolCalls),
179
+ String(item.estimatedTokens),
180
+ item.failureReplayIds.join(', ') || 'none',
181
+ ]);
182
+ return [
183
+ `# Workflow Eval Report: ${run.suiteId}`,
184
+ '',
185
+ `Run: ${run.id}`,
186
+ `Generated: ${run.generatedAt}`,
187
+ `Status: ${run.ok ? 'pass' : 'fail'}`,
188
+ '',
189
+ `Pass@1: ${(run.metrics.passAt1Rate * 100).toFixed(1)}%`,
190
+ `Pass@3: ${(run.metrics.passAt3Rate * 100).toFixed(1)}%`,
191
+ `Average fix iterations: ${run.metrics.averageFixIterations.toFixed(2)}`,
192
+ `Tool calls: ${run.metrics.totalToolCalls}`,
193
+ `Estimated tokens: ${run.metrics.estimatedTokens}`,
194
+ `Failure replays: ${run.metrics.failureReplayCount}`,
195
+ '',
196
+ '| Case | Type | Status | Pass@1 | Pass@3 | Fix Iterations | Tool Calls | Estimated Tokens | Failure Replays |',
197
+ '| --- | --- | --- | --- | --- | ---: | ---: | ---: | --- |',
198
+ ...rows.map(row => `| ${row.map(escapeCell).join(' | ')} |`),
199
+ ].join('\n');
200
+ }
201
+ async function runEvalCase(store, suiteId, item) {
202
+ const attempts = [];
203
+ const failureReplayIds = [];
204
+ const failurePaths = [];
205
+ let passedAt = -1;
206
+ for (let i = 0; i < item.attempts.length; i += 1) {
207
+ const attempt = item.attempts[i];
208
+ const result = await runAttempt(attempt, store.projectDir);
209
+ attempts.push(result);
210
+ if (!result.passed) {
211
+ const replay = createFailureReplay(suiteId, item, result, i + 1);
212
+ failureReplayIds.push(replay.id);
213
+ failurePaths.push(store.saveFailure(replay));
214
+ }
215
+ if (result.passed && passedAt < 0) {
216
+ passedAt = i + 1;
217
+ break;
218
+ }
219
+ }
220
+ const passed = passedAt > 0;
221
+ const estimatedTokens = item.estimatedContextTokens ?? estimateTokens([
222
+ item.task,
223
+ ...attempts.map(attempt => attempt.outputSummary),
224
+ ].join('\n'));
225
+ return {
226
+ caseResult: {
227
+ id: item.id,
228
+ type: item.type,
229
+ title: item.title,
230
+ task: item.task,
231
+ passed,
232
+ passAt1: passedAt === 1,
233
+ passAt3: passed && passedAt <= 3,
234
+ fixIterations: passed ? Math.max(0, passedAt - 1) : attempts.length,
235
+ humanCorrections: item.humanCorrections ?? 0,
236
+ estimatedTokens,
237
+ toolCalls: attempts.length,
238
+ attempts,
239
+ failureReplayIds,
240
+ },
241
+ failurePaths,
242
+ };
243
+ }
244
+ async function runAttempt(attempt, cwd) {
245
+ const started = Date.now();
246
+ const expectedExitCode = attempt.expectedExitCode ?? 0;
247
+ const commandRedaction = redactEvidenceText(attempt.command);
248
+ try {
249
+ const result = await runSafeCommand(attempt.command, {
250
+ cwd,
251
+ timeout: attempt.timeoutMs ?? 30_000,
252
+ });
253
+ const output = [result.stdout ?? '', result.stderr ?? ''].filter(Boolean).join('\n');
254
+ const outputRedaction = redactEvidenceText(output.slice(-2000));
255
+ const outputContains = attempt.outputContains
256
+ ? output.includes(attempt.outputContains)
257
+ : true;
258
+ return {
259
+ id: attempt.id ?? `attempt-${randomUUID().slice(0, 8)}`,
260
+ command: commandRedaction.value,
261
+ expectedExitCode,
262
+ exitCode: result.exitCode,
263
+ passed: result.exitCode === expectedExitCode && outputContains,
264
+ durationMs: Date.now() - started,
265
+ outputSummary: outputRedaction.value || '(no output)',
266
+ redactionApplied: commandRedaction.redacted || outputRedaction.redacted,
267
+ };
268
+ }
269
+ catch (error) {
270
+ const outputRedaction = redactEvidenceText(error instanceof Error ? error.message : String(error));
271
+ return {
272
+ id: attempt.id ?? `attempt-${randomUUID().slice(0, 8)}`,
273
+ command: commandRedaction.value,
274
+ expectedExitCode,
275
+ exitCode: 1,
276
+ passed: false,
277
+ durationMs: Date.now() - started,
278
+ outputSummary: outputRedaction.value,
279
+ redactionApplied: commandRedaction.redacted || outputRedaction.redacted,
280
+ };
281
+ }
282
+ }
283
+ function createFailureReplay(suiteId, item, attempt, attemptNumber) {
284
+ const evidence = redactEvidenceValue({
285
+ command: attempt.command,
286
+ exitCode: attempt.exitCode,
287
+ expectedExitCode: attempt.expectedExitCode,
288
+ outputSummary: attempt.outputSummary,
289
+ });
290
+ return {
291
+ id: `FAIL-${Date.now()}-${randomUUID().slice(0, 8)}`,
292
+ taskId: item.id,
293
+ suiteId,
294
+ caseId: item.id,
295
+ generatedAt: new Date().toISOString(),
296
+ category: item.expectedFailureCategory ?? 'command-failure',
297
+ phase: item.phase ?? 'verify',
298
+ task: item.task,
299
+ wrongTurn: `Attempt ${attemptNumber} did not satisfy eval criteria.`,
300
+ evidence: JSON.stringify(evidence.value),
301
+ correction: 'Run the replay command, inspect failure evidence, then update workflow rules, tests, docs, or accepted risk.',
302
+ prevention: preventionFor(item.expectedFailureCategory ?? 'command-failure'),
303
+ replayCommand: attempt.command,
304
+ status: 'open',
305
+ redactionApplied: attempt.redactionApplied || evidence.redacted,
306
+ };
307
+ }
308
+ function summarizeEval(cases) {
309
+ const total = cases.length;
310
+ const passAt1 = cases.filter(item => item.passAt1).length;
311
+ const passAt3 = cases.filter(item => item.passAt3).length;
312
+ const failed = cases.filter(item => !item.passed).length;
313
+ return {
314
+ total,
315
+ passed: total - failed,
316
+ failed,
317
+ passAt1,
318
+ passAt3,
319
+ passAt1Rate: ratio(passAt1, total),
320
+ passAt3Rate: ratio(passAt3, total),
321
+ averageFixIterations: total === 0 ? 0 : cases.reduce((sum, item) => sum + item.fixIterations, 0) / total,
322
+ totalToolCalls: cases.reduce((sum, item) => sum + item.toolCalls, 0),
323
+ estimatedTokens: cases.reduce((sum, item) => sum + item.estimatedTokens, 0),
324
+ humanCorrections: cases.reduce((sum, item) => sum + item.humanCorrections, 0),
325
+ failureReplayCount: cases.reduce((sum, item) => sum + item.failureReplayIds.length, 0),
326
+ };
327
+ }
328
+ function preventionFor(category) {
329
+ const map = {
330
+ 'wrong-exploration-path': 'Add code intelligence or scoped exploration evidence before implementation.',
331
+ 'hallucinated-project-fact': 'Require evidence paths before project facts become active memory.',
332
+ 'missing-codegraph-or-graph-fallback': 'Record graph provider status and explicit fallback reason.',
333
+ 'over-broad-context-load': 'Use context budget and lazy context pack before broad reads.',
334
+ 'bad-skill-recommendation': 'Lower capability confidence or require stronger tool evidence.',
335
+ 'missing-verification-evidence': 'Block final claims until runtime evidence exists.',
336
+ 'failed-security-or-resource-gate': 'Promote the finding into security or resource governance checks.',
337
+ 'human-correction-after-agent-confidence': 'Record human correction as an eval signal and lower confidence.',
338
+ 'command-failure': 'Capture command, exit code, output summary, and a replay command.',
339
+ unknown: 'Classify the failure before promoting any workflow rule.',
340
+ };
341
+ return map[category];
342
+ }
343
+ function comparisonRecommendation(delta) {
344
+ const better = delta.passAt1Rate > 0 || delta.passAt3Rate > 0 || delta.averageFixIterations < 0 || delta.humanCorrections < 0;
345
+ const worse = delta.passAt1Rate < 0 || delta.passAt3Rate < 0 || delta.averageFixIterations > 0 || delta.humanCorrections > 0;
346
+ if (better && !worse)
347
+ return 'improved';
348
+ if (worse && !better)
349
+ return 'regressed';
350
+ if (better || worse)
351
+ return 'mixed';
352
+ return 'same';
353
+ }
354
+ function pickRun(run) {
355
+ return { id: run.id, suiteId: run.suiteId, metrics: run.metrics };
356
+ }
357
+ function readJson(path) {
358
+ try {
359
+ return JSON.parse(stripBom(readFileSync(path, 'utf-8')));
360
+ }
361
+ catch {
362
+ return null;
363
+ }
364
+ }
365
+ function stripBom(text) {
366
+ return text.charCodeAt(0) === 0xFEFF ? text.slice(1) : text;
367
+ }
368
+ function ratio(part, total) {
369
+ return total === 0 ? 0 : Math.round((part / total) * 1000) / 1000;
370
+ }
371
+ function safeSegment(value) {
372
+ return basename(value).replace(/[^a-zA-Z0-9._-]/g, '-');
373
+ }
374
+ function escapeCell(value) {
375
+ return value.replace(/\|/g, '\\|');
376
+ }
377
+ //# sourceMappingURL=WorkflowEval.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"WorkflowEval.js","sourceRoot":"","sources":["../../src/eval/WorkflowEval.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAA;AACxC,OAAO,EAAE,UAAU,EAAE,SAAS,EAAE,YAAY,EAAE,WAAW,EAAE,aAAa,EAAE,MAAM,SAAS,CAAA;AACzF,OAAO,EAAE,QAAQ,EAAE,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,WAAW,CAAA;AACxE,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAA;AAC5D,OAAO,EAAE,kBAAkB,EAAE,mBAAmB,EAAE,MAAM,+BAA+B,CAAA;AACvF,OAAO,EAAE,cAAc,EAAE,MAAM,+BAA+B,CAAA;AAgJ9D,MAAM,UAAU,wBAAwB;IACtC,OAAO;QACL,OAAO,EAAE,KAAK;QACd,EAAE,EAAE,mBAAmB;QACvB,IAAI,EAAE,yBAAyB;QAC/B,KAAK,EAAE;YACL;gBACE,EAAE,EAAE,0BAA0B;gBAC9B,IAAI,EAAE,QAAQ;gBACd,KAAK,EAAE,wBAAwB;gBAC/B,IAAI,EAAE,iEAAiE;gBACvE,KAAK,EAAE,QAAQ;gBACf,eAAe,EAAE,CAAC,iBAAiB,EAAE,+BAA+B,CAAC;gBACrE,QAAQ,EAAE;oBACR;wBACE,EAAE,EAAE,WAAW;wBACf,OAAO,EAAE,0CAA0C;wBACnD,gBAAgB,EAAE,CAAC;wBACnB,cAAc,EAAE,eAAe;qBAChC;iBACF;aACF;SACF;KACF,CAAA;AACH,CAAC;AAED,MAAM,OAAO,iBAAiB;IAS5B,YAAY,UAAoC,EAAE;QAChD,IAAI,CAAC,UAAU,GAAG,OAAO,CAAC,OAAO,CAAC,UAAU,IAAI,OAAO,CAAC,GAAG,EAAE,CAAC,CAAA;QAC9D,IAAI,CAAC,SAAS,GAAG,UAAU,CAAC,OAAO,CAAC,QAAQ,IAAI,EAAE,CAAC;YACjD,CAAC,CAAC,OAAO,CAAC,QAAkB;YAC5B,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,OAAO,CAAC,QAAQ,IAAI,QAAQ,CAAC,CAAA;QACvD,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,OAAO,CAAC,CAAA;QAC7C,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAA;QAC9C,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAA;QAC1C,IAAI,CAAC,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAA;QAClD,IAAI,CAAC,eAAe,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,cAAc,CAAC,CAAA;IAC5D,CAAC;IAED,SAAS,CAAC,OAAO,GAAG,mBAAmB,EAAE,KAAK,GAAG,KAAK;QACpD,MAAM,KAAK,GAAG,EAAE,GAAG,wBAAwB,EAAE,EAAE,EAAE,EAAE,OAAO,EAAE,CAAA;QAC5D,MAAM,IAAI,GAAG,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAA;QACpC,IAAI,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,KAAK;YAAE,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,KAAK,EAAE,KAAK,EAAE,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,EAAE,CAAA;QAC/F,SAAS,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAA;QAC7C,aAAa,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,OAAO,CAAC,CAAA;QAC5D,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,CAAA;IACvC,CAAC;IAED,SAAS,CAAC,aAAa,GAAG,mBAAmB;QAC3C,MAAM,IAAI,GAAG,IAAI,CAAC,gBAAgB,CAAC,aAAa,CAAC,CAAA;QACjD,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC;YAAE,OAAO,wBAAwB,EAAE,CAAA;QACxD,OAAO,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CAAsB,CAAA;IAC/E,CAAC;IAED,OAAO,CAAC,GAAoB;QAC1B,SAAS,CAAC,IAAI,CAAC,OAAO,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAA;QAC5C,MAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,GAAG,WAAW,CAAC,GAAG,CAAC,EAAE,CAAC,OAAO,CAAC,CAAA;QAC9D,aAAa,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,OAAO,CAAC,CAAA;QAC1D,OAAO,IAAI,CAAA;IACb,CAAC;IAED,WAAW,CAAC,MAA2B;QACrC,SAAS,CAAC,IAAI,CAAC,WAAW,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAA;QAChD,MAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,GAAG,WAAW,CAAC,MAAM,CAAC,EAAE,CAAC,OAAO,CAAC,CAAA;QACrE,aAAa,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,OAAO,CAAC,CAAA;QAC7D,OAAO,IAAI,CAAA;IACb,CAAC;IAED,YAAY,CAAC,QAAiD,EAAE;QAC9D,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,WAAW,CAAC;YAAE,OAAO,EAAE,CAAA;QAC5C,MAAM,KAAK,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,EAAE,GAAG,KAAK,CAAC,SAAS,GAAG,EAAE,GAAG,EAAE,GAAG,EAAE,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,CAAA;QACtF,OAAO,WAAW,CAAC,IAAI,CAAC,WAAW,CAAC;aACjC,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC;aACtC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,QAAQ,CAAsB,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,IAAI,CAAC,CAAC,CAAC;aACxE,MAAM,CAAC,CAAC,MAAM,EAAiC,EAAE,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC;aAClE,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,KAAK,CAAC,MAAM,IAAI,MAAM,CAAC,MAAM,KAAK,KAAK,CAAC,MAAM,CAAC;aACjE,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,KAAK,IAAI,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,WAAW,CAAC,IAAI,KAAK,CAAC;aACnE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,WAAW,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAA;IAC1E,CAAC;IAED,UAAU,CAAC,EAAU;QACnB,OAAO,QAAQ,CAAsB,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,GAAG,WAAW,CAAC,EAAE,CAAC,OAAO,CAAC,CAAC,CAAA;IACzF,CAAC;IAED,OAAO,CAAC,QAAgB;QACtB,MAAM,IAAI,GAAG,IAAI,CAAC,cAAc,CAAC,QAAQ,CAAC,CAAA;QAC1C,MAAM,GAAG,GAAG,QAAQ,CAAkB,IAAI,CAAC,CAAA;QAC3C,IAAI,CAAC,GAAG;YAAE,MAAM,IAAI,KAAK,CAAC,uBAAuB,QAAQ,EAAE,CAAC,CAAA;QAC5D,OAAO,GAAG,CAAA;IACZ,CAAC;IAED,cAAc,CAAC,EAAU;QACvB,MAAM,OAAO,GAAG,IAAI,CAAC,UAAU,CAAC,EAAE,CAAC,CAAA;QACnC,IAAI,CAAC,OAAO;YAAE,MAAM,IAAI,KAAK,CAAC,6BAA6B,EAAE,EAAE,CAAC,CAAA;QAChE,SAAS,CAAC,IAAI,CAAC,eAAe,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAA;QACpD,MAAM,SAAS,GAAgC;YAC7C,EAAE,EAAE,WAAW,IAAI,CAAC,GAAG,EAAE,IAAI,UAAU,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE;YACvD,SAAS,EAAE,OAAO,CAAC,EAAE;YACrB,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;YACnC,QAAQ,EAAE,OAAO,CAAC,QAAQ;YAC1B,KAAK,EAAE,WAAW,OAAO,CAAC,QAAQ,OAAO,OAAO,CAAC,MAAM,EAAE;YACzD,cAAc,EAAE,OAAO,CAAC,UAAU;YAClC,YAAY,EAAE,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,GAAG,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC,OAAO,CAAC;YACvE,MAAM,EAAE,WAAW;SACpB,CAAA;QACD,aAAa,CAAC,IAAI,CAAC,IAAI,CAAC,eAAe,EAAE,GAAG,WAAW,CAAC,SAAS,CAAC,EAAE,CAAC,OAAO,CAAC,EAAE,IAAI,CAAC,SAAS,CAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,OAAO,CAAC,CAAA;QAC3H,IAAI,CAAC,WAAW,CAAC,EAAE,GAAG,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,CAAC,CAAA;QACpD,OAAO,SAAS,CAAA;IAClB,CAAC;IAED,SAAS,CAAC,OAAe;QACvB,OAAO,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,GAAG,WAAW,CAAC,OAAO,CAAC,OAAO,CAAC,CAAA;IAC7D,CAAC;IAEO,gBAAgB,CAAC,aAAqB;QAC5C,IAAI,aAAa,CAAC,QAAQ,CAAC,OAAO,CAAC;YAAE,OAAO,UAAU,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,UAAU,EAAE,aAAa,CAAC,CAAA;QAC/H,OAAO,IAAI,CAAC,SAAS,CAAC,aAAa,CAAC,CAAA;IACtC,CAAC;IAEO,cAAc,CAAC,QAAgB;QACrC,IAAI,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC;YAAE,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,UAAU,EAAE,QAAQ,CAAC,CAAA;QAC3G,OAAO,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,GAAG,WAAW,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAA;IAC5D,CAAC;CACF;AAED,MAAM,CAAC,KAAK,UAAU,oBAAoB,CAAC,UAEvC,EAAE;IACJ,MAAM,KAAK,GAAG,IAAI,iBAAiB,CAAC,OAAO,CAAC,CAAA;IAC5C,MAAM,KAAK,GAAG,KAAK,CAAC,SAAS,CAAC,OAAO,CAAC,KAAK,IAAI,mBAAmB,CAAC,CAAA;IACnE,MAAM,WAAW,GAA6B,EAAE,CAAA;IAChD,MAAM,YAAY,GAAa,EAAE,CAAA;IACjC,MAAM,KAAK,GAAG,QAAQ,IAAI,CAAC,GAAG,EAAE,IAAI,UAAU,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,CAAA;IAE9D,KAAK,MAAM,IAAI,IAAI,KAAK,CAAC,KAAK,EAAE,CAAC;QAC/B,MAAM,MAAM,GAAG,MAAM,WAAW,CAAC,KAAK,EAAE,KAAK,CAAC,EAAE,EAAE,IAAI,CAAC,CAAA;QACvD,WAAW,CAAC,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAA;QACnC,YAAY,CAAC,IAAI,CAAC,GAAG,MAAM,CAAC,YAAY,CAAC,CAAA;IAC3C,CAAC;IAED,MAAM,gBAAgB,GAAG,WAAW,CAAC,OAAO,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,gBAAgB,CAAC,CAAA;IAC/E,MAAM,GAAG,GAAoB;QAC3B,EAAE,EAAE,KAAK;QACT,OAAO,EAAE,KAAK,CAAC,EAAE;QACjB,WAAW,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;QACrC,UAAU,EAAE,KAAK,CAAC,UAAU;QAC5B,EAAE,EAAE,WAAW,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC;QAC9C,KAAK,EAAE,WAAW;QAClB,OAAO,EAAE,aAAa,CAAC,WAAW,CAAC;QACnC,gBAAgB;KACjB,CAAA;IACD,MAAM,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,CAAA;IAClC,OAAO,EAAE,GAAG,EAAE,OAAO,EAAE,YAAY,EAAE,CAAA;AACvC,CAAC;AAED,MAAM,UAAU,uBAAuB,CAAC,OAGvC;IACC,MAAM,KAAK,GAAG,IAAI,iBAAiB,CAAC,OAAO,CAAC,CAAA;IAC5C,MAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAA;IAChD,MAAM,SAAS,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,SAAS,CAAC,CAAA;IAClD,MAAM,KAAK,GAAG;QACZ,WAAW,EAAE,SAAS,CAAC,OAAO,CAAC,WAAW,GAAG,QAAQ,CAAC,OAAO,CAAC,WAAW;QACzE,WAAW,EAAE,SAAS,CAAC,OAAO,CAAC,WAAW,GAAG,QAAQ,CAAC,OAAO,CAAC,WAAW;QACzE,oBAAoB,EAAE,SAAS,CAAC,OAAO,CAAC,oBAAoB,GAAG,QAAQ,CAAC,OAAO,CAAC,oBAAoB;QACpG,cAAc,EAAE,SAAS,CAAC,OAAO,CAAC,cAAc,GAAG,QAAQ,CAAC,OAAO,CAAC,cAAc;QAClF,eAAe,EAAE,SAAS,CAAC,OAAO,CAAC,eAAe,GAAG,QAAQ,CAAC,OAAO,CAAC,eAAe;QACrF,gBAAgB,EAAE,SAAS,CAAC,OAAO,CAAC,gBAAgB,GAAG,QAAQ,CAAC,OAAO,CAAC,gBAAgB;KACzF,CAAA;IACD,OAAO;QACL,QAAQ,EAAE,OAAO,CAAC,QAAQ,CAAC;QAC3B,SAAS,EAAE,OAAO,CAAC,SAAS,CAAC;QAC7B,KAAK;QACL,cAAc,EAAE,wBAAwB,CAAC,KAAK,CAAC;KAChD,CAAA;AACH,CAAC;AAED,MAAM,UAAU,wBAAwB,CAAC,GAAoB;IAC3D,MAAM,IAAI,GAAG,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC;QACjC,IAAI,CAAC,EAAE;QACP,IAAI,CAAC,IAAI;QACT,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM;QAC7B,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI;QAC3B,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI;QAC3B,MAAM,CAAC,IAAI,CAAC,aAAa,CAAC;QAC1B,MAAM,CAAC,IAAI,CAAC,SAAS,CAAC;QACtB,MAAM,CAAC,IAAI,CAAC,eAAe,CAAC;QAC5B,IAAI,CAAC,gBAAgB,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,MAAM;KAC3C,CAAC,CAAA;IACF,OAAO;QACL,2BAA2B,GAAG,CAAC,OAAO,EAAE;QACxC,EAAE;QACF,QAAQ,GAAG,CAAC,EAAE,EAAE;QAChB,cAAc,GAAG,CAAC,WAAW,EAAE;QAC/B,WAAW,GAAG,CAAC,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,EAAE;QACrC,EAAE;QACF,WAAW,CAAC,GAAG,CAAC,OAAO,CAAC,WAAW,GAAG,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG;QACxD,WAAW,CAAC,GAAG,CAAC,OAAO,CAAC,WAAW,GAAG,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG;QACxD,2BAA2B,GAAG,CAAC,OAAO,CAAC,oBAAoB,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE;QACxE,eAAe,GAAG,CAAC,OAAO,CAAC,cAAc,EAAE;QAC3C,qBAAqB,GAAG,CAAC,OAAO,CAAC,eAAe,EAAE;QAClD,oBAAoB,GAAG,CAAC,OAAO,CAAC,kBAAkB,EAAE;QACpD,EAAE;QACF,+GAA+G;QAC/G,4DAA4D;QAC5D,GAAG,IAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,KAAK,GAAG,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC;KAC7D,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;AACd,CAAC;AAED,KAAK,UAAU,WAAW,CAAC,KAAwB,EAAE,OAAe,EAAE,IAAsB;IAI1F,MAAM,QAAQ,GAAgC,EAAE,CAAA;IAChD,MAAM,gBAAgB,GAAa,EAAE,CAAA;IACrC,MAAM,YAAY,GAAa,EAAE,CAAA;IACjC,IAAI,QAAQ,GAAG,CAAC,CAAC,CAAA;IAEjB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE,CAAC;QACjD,MAAM,OAAO,GAAG,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;QAChC,MAAM,MAAM,GAAG,MAAM,UAAU,CAAC,OAAO,EAAE,KAAK,CAAC,UAAU,CAAC,CAAA;QAC1D,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,CAAA;QACrB,IAAI,CAAC,MAAM,CAAC,MAAM,EAAE,CAAC;YACnB,MAAM,MAAM,GAAG,mBAAmB,CAAC,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,GAAG,CAAC,CAAC,CAAA;YAChE,gBAAgB,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAA;YAChC,YAAY,CAAC,IAAI,CAAC,KAAK,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAA;QAC9C,CAAC;QACD,IAAI,MAAM,CAAC,MAAM,IAAI,QAAQ,GAAG,CAAC,EAAE,CAAC;YAClC,QAAQ,GAAG,CAAC,GAAG,CAAC,CAAA;YAChB,MAAK;QACP,CAAC;IACH,CAAC;IAED,MAAM,MAAM,GAAG,QAAQ,GAAG,CAAC,CAAA;IAC3B,MAAM,eAAe,GAAG,IAAI,CAAC,sBAAsB,IAAI,cAAc,CAAC;QACpE,IAAI,CAAC,IAAI;QACT,GAAG,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,EAAE,CAAC,OAAO,CAAC,aAAa,CAAC;KAClD,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAA;IACb,OAAO;QACL,UAAU,EAAE;YACV,EAAE,EAAE,IAAI,CAAC,EAAE;YACX,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,KAAK,EAAE,IAAI,CAAC,KAAK;YACjB,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,MAAM;YACN,OAAO,EAAE,QAAQ,KAAK,CAAC;YACvB,OAAO,EAAE,MAAM,IAAI,QAAQ,IAAI,CAAC;YAChC,aAAa,EAAE,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,QAAQ,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,MAAM;YACnE,gBAAgB,EAAE,IAAI,CAAC,gBAAgB,IAAI,CAAC;YAC5C,eAAe;YACf,SAAS,EAAE,QAAQ,CAAC,MAAM;YAC1B,QAAQ;YACR,gBAAgB;SACjB;QACD,YAAY;KACb,CAAA;AACH,CAAC;AAED,KAAK,UAAU,UAAU,CAAC,OAA4B,EAAE,GAAW;IACjE,MAAM,OAAO,GAAG,IAAI,CAAC,GAAG,EAAE,CAAA;IAC1B,MAAM,gBAAgB,GAAG,OAAO,CAAC,gBAAgB,IAAI,CAAC,CAAA;IACtD,MAAM,gBAAgB,GAAG,kBAAkB,CAAC,OAAO,CAAC,OAAO,CAAC,CAAA;IAC5D,IAAI,CAAC;QACH,MAAM,MAAM,GAAG,MAAM,cAAc,CAAC,OAAO,CAAC,OAAO,EAAE;YACnD,GAAG;YACH,OAAO,EAAE,OAAO,CAAC,SAAS,IAAI,MAAM;SACrC,CAAC,CAAA;QACF,MAAM,MAAM,GAAG,CAAC,MAAM,CAAC,MAAM,IAAI,EAAE,EAAE,MAAM,CAAC,MAAM,IAAI,EAAE,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QACpF,MAAM,eAAe,GAAG,kBAAkB,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAA;QAC/D,MAAM,cAAc,GAAG,OAAO,CAAC,cAAc;YAC3C,CAAC,CAAC,MAAM,CAAC,QAAQ,CAAC,OAAO,CAAC,cAAc,CAAC;YACzC,CAAC,CAAC,IAAI,CAAA;QACR,OAAO;YACL,EAAE,EAAE,OAAO,CAAC,EAAE,IAAI,WAAW,UAAU,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE;YACvD,OAAO,EAAE,gBAAgB,CAAC,KAAK;YAC/B,gBAAgB;YAChB,QAAQ,EAAE,MAAM,CAAC,QAAQ;YACzB,MAAM,EAAE,MAAM,CAAC,QAAQ,KAAK,gBAAgB,IAAI,cAAc;YAC9D,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,OAAO;YAChC,aAAa,EAAE,eAAe,CAAC,KAAK,IAAI,aAAa;YACrD,gBAAgB,EAAE,gBAAgB,CAAC,QAAQ,IAAI,eAAe,CAAC,QAAQ;SACxE,CAAA;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,MAAM,eAAe,GAAG,kBAAkB,CAAC,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAAA;QAClG,OAAO;YACL,EAAE,EAAE,OAAO,CAAC,EAAE,IAAI,WAAW,UAAU,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE;YACvD,OAAO,EAAE,gBAAgB,CAAC,KAAK;YAC/B,gBAAgB;YAChB,QAAQ,EAAE,CAAC;YACX,MAAM,EAAE,KAAK;YACb,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,OAAO;YAChC,aAAa,EAAE,eAAe,CAAC,KAAK;YACpC,gBAAgB,EAAE,gBAAgB,CAAC,QAAQ,IAAI,eAAe,CAAC,QAAQ;SACxE,CAAA;IACH,CAAC;AACH,CAAC;AAED,SAAS,mBAAmB,CAAC,OAAe,EAAE,IAAsB,EAAE,OAAkC,EAAE,aAAqB;IAC7H,MAAM,QAAQ,GAAG,mBAAmB,CAAC;QACnC,OAAO,EAAE,OAAO,CAAC,OAAO;QACxB,QAAQ,EAAE,OAAO,CAAC,QAAQ;QAC1B,gBAAgB,EAAE,OAAO,CAAC,gBAAgB;QAC1C,aAAa,EAAE,OAAO,CAAC,aAAa;KACrC,CAAC,CAAA;IACF,OAAO;QACL,EAAE,EAAE,QAAQ,IAAI,CAAC,GAAG,EAAE,IAAI,UAAU,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE;QACpD,MAAM,EAAE,IAAI,CAAC,EAAE;QACf,OAAO;QACP,MAAM,EAAE,IAAI,CAAC,EAAE;QACf,WAAW,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;QACrC,QAAQ,EAAE,IAAI,CAAC,uBAAuB,IAAI,iBAAiB;QAC3D,KAAK,EAAE,IAAI,CAAC,KAAK,IAAI,QAAQ;QAC7B,IAAI,EAAE,IAAI,CAAC,IAAI;QACf,SAAS,EAAE,WAAW,aAAa,iCAAiC;QACpE,QAAQ,EAAE,IAAI,CAAC,SAAS,CAAC,QAAQ,CAAC,KAAK,CAAC;QACxC,UAAU,EAAE,8GAA8G;QAC1H,UAAU,EAAE,aAAa,CAAC,IAAI,CAAC,uBAAuB,IAAI,iBAAiB,CAAC;QAC5E,aAAa,EAAE,OAAO,CAAC,OAAO;QAC9B,MAAM,EAAE,MAAM;QACd,gBAAgB,EAAE,OAAO,CAAC,gBAAgB,IAAI,QAAQ,CAAC,QAAQ;KAChE,CAAA;AACH,CAAC;AAED,SAAS,aAAa,CAAC,KAA+B;IACpD,MAAM,KAAK,GAAG,KAAK,CAAC,MAAM,CAAA;IAC1B,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,MAAM,CAAA;IACzD,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,MAAM,CAAA;IACzD,MAAM,MAAM,GAAG,KAAK,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,MAAM,CAAA;IACxD,OAAO;QACL,KAAK;QACL,MAAM,EAAE,KAAK,GAAG,MAAM;QACtB,MAAM;QACN,OAAO;QACP,OAAO;QACP,WAAW,EAAE,KAAK,CAAC,OAAO,EAAE,KAAK,CAAC;QAClC,WAAW,EAAE,KAAK,CAAC,OAAO,EAAE,KAAK,CAAC;QAClC,oBAAoB,EAAE,KAAK,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,IAAI,EAAE,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,aAAa,EAAE,CAAC,CAAC,GAAG,KAAK;QACxG,cAAc,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,IAAI,EAAE,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC;QACpE,eAAe,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,IAAI,EAAE,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,eAAe,EAAE,CAAC,CAAC;QAC3E,gBAAgB,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,IAAI,EAAE,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,gBAAgB,EAAE,CAAC,CAAC;QAC7E,kBAAkB,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,IAAI,EAAE,EAAE,CAAC,GAAG,GAAG,IAAI,CAAC,gBAAgB,CAAC,MAAM,EAAE,CAAC,CAAC;KACvF,CAAA;AACH,CAAC;AAED,SAAS,aAAa,CAAC,QAA+B;IACpD,MAAM,GAAG,GAA0C;QACjD,wBAAwB,EAAE,6EAA6E;QACvG,2BAA2B,EAAE,mEAAmE;QAChG,qCAAqC,EAAE,4DAA4D;QACnG,yBAAyB,EAAE,8DAA8D;QACzF,0BAA0B,EAAE,gEAAgE;QAC5F,+BAA+B,EAAE,mDAAmD;QACpF,kCAAkC,EAAE,kEAAkE;QACtG,yCAAyC,EAAE,iEAAiE;QAC5G,iBAAiB,EAAE,mEAAmE;QACtF,OAAO,EAAE,0DAA0D;KACpE,CAAA;IACD,OAAO,GAAG,CAAC,QAAQ,CAAC,CAAA;AACtB,CAAC;AAED,SAAS,wBAAwB,CAAC,KAAsC;IACtE,MAAM,MAAM,GAAG,KAAK,CAAC,WAAW,GAAG,CAAC,IAAI,KAAK,CAAC,WAAW,GAAG,CAAC,IAAI,KAAK,CAAC,oBAAoB,GAAG,CAAC,IAAI,KAAK,CAAC,gBAAgB,GAAG,CAAC,CAAA;IAC7H,MAAM,KAAK,GAAG,KAAK,CAAC,WAAW,GAAG,CAAC,IAAI,KAAK,CAAC,WAAW,GAAG,CAAC,IAAI,KAAK,CAAC,oBAAoB,GAAG,CAAC,IAAI,KAAK,CAAC,gBAAgB,GAAG,CAAC,CAAA;IAC5H,IAAI,MAAM,IAAI,CAAC,KAAK;QAAE,OAAO,UAAU,CAAA;IACvC,IAAI,KAAK,IAAI,CAAC,MAAM;QAAE,OAAO,WAAW,CAAA;IACxC,IAAI,MAAM,IAAI,KAAK;QAAE,OAAO,OAAO,CAAA;IACnC,OAAO,MAAM,CAAA;AACf,CAAC;AAED,SAAS,OAAO,CAAC,GAAoB;IACnC,OAAO,EAAE,EAAE,EAAE,GAAG,CAAC,EAAE,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,OAAO,EAAE,GAAG,CAAC,OAAO,EAAE,CAAA;AACnE,CAAC;AAED,SAAS,QAAQ,CAAI,IAAY;IAC/B,IAAI,CAAC;QACH,OAAO,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CAAM,CAAA;IAC/D,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,CAAA;IACb,CAAC;AACH,CAAC;AAED,SAAS,QAAQ,CAAC,IAAY;IAC5B,OAAO,IAAI,CAAC,UAAU,CAAC,CAAC,CAAC,KAAK,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAA;AAC7D,CAAC;AAED,SAAS,KAAK,CAAC,IAAY,EAAE,KAAa;IACxC,OAAO,KAAK,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,IAAI,GAAG,KAAK,CAAC,GAAG,IAAI,CAAC,GAAG,IAAI,CAAA;AACnE,CAAC;AAED,SAAS,WAAW,CAAC,KAAa;IAChC,OAAO,QAAQ,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,kBAAkB,EAAE,GAAG,CAAC,CAAA;AACzD,CAAC;AAED,SAAS,UAAU,CAAC,KAAa;IAC/B,OAAO,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,KAAK,CAAC,CAAA;AACpC,CAAC"}
@@ -0,0 +1,43 @@
1
+ import type { IEventBus } from '../core/eventBus.js';
2
+ import type { IArtifactStore } from '../artifact/store.js';
3
+ import type { ArtifactId, SessionId } from '../artifact/types.js';
4
+ export interface DefectPayload {
5
+ rootCauseCategory: string;
6
+ evidence: string;
7
+ detector: string;
8
+ severity: 'low' | 'medium' | 'high' | 'critical';
9
+ autoCreated: boolean;
10
+ sessionId: SessionId;
11
+ timestamp: number;
12
+ context?: Record<string, unknown>;
13
+ }
14
+ export interface IAutoDefectCreator {
15
+ start(): void;
16
+ stop(): void;
17
+ getAutoDefects(): ArtifactId[];
18
+ }
19
+ export interface AutoDefectCreatorOptions {
20
+ gateFailureThreshold?: number;
21
+ }
22
+ export declare class AutoDefectCreator implements IAutoDefectCreator {
23
+ private store;
24
+ private eventBus;
25
+ private subs;
26
+ private autoDefects;
27
+ private gateFailureStreaks;
28
+ private gateDefectCreated;
29
+ private handledGateEventIds;
30
+ private gateFailureThreshold;
31
+ constructor(store: IArtifactStore, eventBus: IEventBus, options?: AutoDefectCreatorOptions);
32
+ start(): void;
33
+ stop(): void;
34
+ getAutoDefects(): ArtifactId[];
35
+ private onHallucination;
36
+ private onAISlop;
37
+ private onDuplicateEdit;
38
+ private onBruteRetry;
39
+ private onBlameShift;
40
+ private onGateFailure;
41
+ private onGateExecuted;
42
+ createDefect(payload: DefectPayload, title: string): Promise<ArtifactId | null>;
43
+ }