@hongmaple0820/med-scale-research-os 0.43.0

package/dist/bridge/PythonBridge.js

@@ -0,0 +1,437 @@
+// SCALE Engine — Python Bridge Core Engine (v1.0.0)
+// Python-TS 桥接核心引擎：子进程管理 + JSON 协议通信 + 超时/重试
+import { spawn } from 'child_process';
+import { resolve, join } from 'path';
+import { randomUUID } from 'crypto';
+import { existsSync } from 'fs';
+import { logger } from '../core/logger.js';
+import { BRIDGE_PROTOCOL_VERSION, DEFAULT_BRIDGE_CONFIG, STAGE_CLI_MAP, BridgeResponseSchema, getStageInputSchema, } from './types.js';
+// ============================================================================
+// PythonBridge — 核心桥接引擎
+// ============================================================================
+export class PythonBridge {
+    constructor(config) {
+        this.executionRecords = new Map();
+        this.checkpoints = new Map();
+        this.config = { ...DEFAULT_BRIDGE_CONFIG, ...config };
+    }
+    // ==========================================================================
+    // Core: Execute a single analysis stage
+    // ==========================================================================
+    /**
+     * 执行单个分析阶段
+     *
+     * 流程:
+     *  1. 校验输入 (Zod)
+     *  2. 构建 BridgeRequest
+     *  3. Spawn Python 子进程
+     *  4. 通过 stdin 传递 JSON 请求
+     *  5. 从 stdout 读取 JSON 响应
+     *  6. 校验响应 (Zod)
+     *  7. 失败时重试
+     *
+     * @param stage 分析阶段
+     * @param input 阶段输入参数
+     * @param timeoutMs 超时毫秒（覆盖默认值）
+     * @returns BridgeResponse
+     */
+    async executeStage(stage, input, timeoutMs) {
+        const requestId = `bridge-${randomUUID().slice(0, 8)}`;
+        const effectiveTimeout = timeoutMs ?? this.config.defaultTimeoutMs;
+        // 1. 校验输入
+        const inputSchema = getStageInputSchema(stage);
+        const inputResult = inputSchema.safeParse(input);
+        if (!inputResult.success) {
+            const errorMsg = inputResult.error.issues
+                .map(i => `${i.path.join('.')}: ${i.message}`)
+                .join('; ');
+            return this._makeErrorResponse(requestId, stage, `Input validation failed: ${errorMsg}`);
+        }
+        // 2. 构建 BridgeRequest
+        const request = {
+            protocol: BRIDGE_PROTOCOL_VERSION,
+            stage,
+            input,
+            timeout_ms: effectiveTimeout,
+            output_schema: `${stage}_result_v1`,
+            request_id: requestId,
+        };
+        // 3. 创建执行记录
+        const record = {
+            requestId,
+            stage,
+            status: 'pending',
+            startedAt: Date.now(),
+            retryCount: 0,
+        };
+        this.executionRecords.set(requestId, record);
+        // 4. 执行（含重试）
+        let lastError;
+        for (let attempt = 0; attempt <= this.config.maxRetries; attempt++) {
+            record.retryCount = attempt;
+            record.status = 'running';
+            try {
+                const response = await this._spawnAndExecute(request, effectiveTimeout);
+                // 校验响应
+                const parseResult = BridgeResponseSchema.safeParse(response);
+                if (!parseResult.success) {
+                    logger.warn({ requestId, stage, zodErrors: parseResult.error.issues }, 'Bridge response schema validation failed, accepting raw response');
+                }
+                // 成功
+                record.status = 'completed';
+                record.completedAt = Date.now();
+                record.durationMs = response.duration_ms;
+                return response;
+            }
+            catch (err) {
+                lastError = String(err);
+                logger.warn({ requestId, stage, attempt, error: lastError }, `Bridge execution attempt ${attempt + 1} failed`);
+                // 超时不重试
+                if (lastError.includes('TIMEOUT')) {
+                    record.status = 'timeout';
+                    break;
+                }
+            }
+        }
+        // 所有重试耗尽
+        record.status = 'failed';
+        record.completedAt = Date.now();
+        record.error = lastError;
+        return this._makeErrorResponse(requestId, stage, lastError ?? 'Unknown error');
+    }
+    // ==========================================================================
+    // Full Pipeline — 4-Stage 顺序执行
+    // ==========================================================================
+    /**
+     * 执行完整 4-Stage Pipeline
+     *
+     * Stage 间自动传递数据:
+     *  - expression → screening: normal_tissue_expression
+     *  - expression → deep_research: ensg_id
+     *  - expression + screening + deep_research → business: 各阶段输出
+     *
+     * 支持检查点恢复：如果指定 checkpoint，从上次中断的阶段继续
+     */
+    async executeFullPipeline(target, disease, cancerTypes, options) {
+        const startTime = Date.now();
+        const stages = {};
+        const stageOrder = ['expression', 'screening', 'deep_research', 'business'];
+        // 确定从哪个阶段开始（检查点恢复）
+        const completedStages = options?.checkpoint?.completedStages ?? [];
+        const startIndex = stageOrder.findIndex(s => !completedStages.includes(s));
+        let ensgId = options?.ensgId;
+        for (let i = startIndex; i < stageOrder.length; i++) {
+            const stage = stageOrder[i];
+            // 根据阶段构建输入
+            const input = this._buildStageInput(stage, target, disease, cancerTypes, ensgId, options, stages);
+            const response = await this.executeStage(stage, input);
+            stages[stage] = response;
+            if (!response.success) {
+                // 阶段失败，记录检查点并终止
+                this._saveCheckpoint('pipeline', {
+                    completedStages: stageOrder.slice(0, i).filter(s => stages[s]?.success),
+                    stageOutputPaths: {},
+                    createdAt: Date.now(),
+                });
+                break;
+            }
+            // 提取 ensg_id 供后续阶段使用
+            if (stage === 'expression' && response.data && typeof response.data === 'object') {
+                const data = response.data;
+                if (data.ensg_id && typeof data.ensg_id === 'string') {
+                    ensgId = data.ensg_id;
+                }
+            }
+        }
+        const completed = stageOrder.filter(s => stages[s]?.success);
+        const failed = stageOrder.filter(s => stages[s] && !stages[s].success);
+        return {
+            success: failed.length === 0 && completed.length === stageOrder.length,
+            stages,
+            summary: { stages_completed: completed, stages_failed: failed },
+            duration_ms: Date.now() - startTime,
+        };
+    }
+    // ==========================================================================
+    // Health Check
+    // ==========================================================================
+    /**
+     * 健康检查：验证 Python 环境和平台目录
+     */
+    async healthCheck() {
+        const status = {
+            pythonAvailable: false,
+            platformExists: false,
+            apiHealth: {},
+            lastChecked: new Date().toISOString(),
+        };
+        // 检查 Python 可用性
+        try {
+            const version = await this._getPythonVersion();
+            status.pythonAvailable = true;
+            status.pythonVersion = version;
+        }
+        catch {
+            status.pythonAvailable = false;
+        }
+        // 检查平台目录
+        const platformPath = resolve(this.config.platformDir);
+        status.platformExists = existsSync(join(platformPath, 'main.py'));
+        return status;
+    }
+    // ==========================================================================
+    // Execution Records & Checkpoints
+    // ==========================================================================
+    /** 获取执行记录 */
+    getExecutionRecord(requestId) {
+        return this.executionRecords.get(requestId);
+    }
+    /** 获取所有执行记录 */
+    getAllExecutionRecords() {
+        return Array.from(this.executionRecords.values());
+    }
+    /** 获取检查点 */
+    getCheckpoint(projectId) {
+        return this.checkpoints.get(projectId);
+    }
+    // ==========================================================================
+    // Internal: Spawn Python Process
+    // ==========================================================================
+    /**
+     * Spawn Python 子进程并执行请求
+     *
+     * 通信协议:
+     *  TS → Python: 通过 stdin 传入 JSON 编码的 BridgeRequest + 换行符
+     *  Python → TS: 通过 stdout 输出 JSON 编码的 BridgeResponse + 换行符
+     *  日志/调试: Python stderr 直接透传
+     */
+    _spawnAndExecute(request, timeoutMs) {
+        return new Promise((resolvePromise, reject) => {
+            const platformPath = resolve(this.config.platformDir);
+            const cliStage = STAGE_CLI_MAP[request.stage];
+            // 构建 Python 命令参数
+            // 使用 main.py --json 模式，通过 stdin 传入桥接请求
+            const args = [
+                join(platformPath, 'main.py'),
+                cliStage,
+                '--json',
+            ];
+            // 根据阶段添加参数
+            const input = request.input;
+            if (request.stage === 'expression') {
+                args.push('--gene', String(input.gene_symbol));
+                args.push('--cancers', ...(input.cancer_types || []));
+                if (input.ensg_id)
+                    args.push('--ensg', String(input.ensg_id));
+            }
+            else if (request.stage === 'screening') {
+                args.push('--disease', String(input.disease));
+                if (input.exclude_targets)
+                    args.push('--exclude-targets', input.exclude_targets.join(','));
+                if (input.top_n)
+                    args.push('--top-n', String(input.top_n));
+            }
+            else if (request.stage === 'deep_research') {
+                args.push('--target', String(input.target_name));
+                if (input.ensg_id)
+                    args.push('--ensg', String(input.ensg_id));
+                if (input.disease)
+                    args.push('--disease', String(input.disease));
+            }
+            else if (request.stage === 'business') {
+                args.push('--target', String(input.target_name));
+                if (input.disease)
+                    args.push('--disease', String(input.disease));
+                if (input.modality)
+                    args.push('--modality', String(input.modality));
+                if (input.risk_level)
+                    args.push('--risk-level', String(input.risk_level));
+            }
+            // 添加输出和缓存目录
+            args.push('--output', resolve(this.config.outputDir, cliStage));
+            args.push('--cache', resolve(this.config.cacheDir));
+            logger.info({ requestId: request.request_id, stage: request.stage, args }, 'Spawning Python bridge process');
+            const child = spawn(this.config.pythonPath, args, {
+                cwd: platformPath,
+                env: { ...process.env, ...this.config.env },
+                stdio: ['pipe', 'pipe', 'pipe'],
+            });
+            let stdout = '';
+            let stderr = '';
+            let settled = false;
+            // 超时计时器
+            const timer = setTimeout(() => {
+                if (!settled) {
+                    settled = true;
+                    child.kill('SIGTERM');
+                    reject(new Error(`TIMEOUT: Python bridge execution exceeded ${timeoutMs}ms`));
+                }
+            }, timeoutMs);
+            // 收集 stdout
+            child.stdout.on('data', (chunk) => {
+                stdout += chunk.toString();
+            });
+            // 收集 stderr（日志输出）
+            child.stderr.on('data', (chunk) => {
+                stderr += chunk.toString();
+                // 透传 Python 日志到 SCALE logger
+                const lines = chunk.toString().split('\n').filter(l => l.trim());
+                for (const line of lines) {
+                    logger.debug({ requestId: request.request_id, pyStderr: line }, '[python-bridge]');
+                }
+            });
+            // 进程结束
+            child.on('close', (code) => {
+                clearTimeout(timer);
+                if (settled)
+                    return;
+                settled = true;
+                if (code !== 0 && !stdout.trim()) {
+                    // Python 进程异常退出且无 stdout 输出
+                    reject(new Error(`Python process exited with code ${code}. stderr: ${stderr.slice(-500)}`));
+                    return;
+                }
+                // 解析 stdout JSON
+                try {
+                    // 取 stdout 中最后一个完整的 JSON 对象
+                    // Python main.py --json 会将最终结果输出到 stdout
+                    const jsonStr = this._extractLastJson(stdout);
+                    if (!jsonStr) {
+                        reject(new Error(`No JSON output from Python process. stdout: ${stdout.slice(-200)}, stderr: ${stderr.slice(-200)}`));
+                        return;
+                    }
+                    const raw = JSON.parse(jsonStr);
+                    const response = {
+                        protocol: BRIDGE_PROTOCOL_VERSION,
+                        request_id: request.request_id,
+                        success: raw.success ?? false,
+                        stage: request.stage,
+                        data: raw,
+                        error: raw.error,
+                        duration_ms: raw.duration_ms ?? (Date.now() - (this.executionRecords.get(request.request_id)?.startedAt ?? Date.now())),
+                    };
+                    resolvePromise(response);
+                }
+                catch (parseErr) {
+                    reject(new Error(`Failed to parse Python stdout: ${String(parseErr)}. stdout: ${stdout.slice(-200)}`));
+                }
+            });
+            // 进程错误
+            child.on('error', (err) => {
+                clearTimeout(timer);
+                if (!settled) {
+                    settled = true;
+                    reject(new Error(`Failed to spawn Python process: ${err.message}`));
+                }
+            });
+            // 通过 stdin 传入桥接请求（供 bridge_runner.py 使用）
+            try {
+                child.stdin.write(JSON.stringify(request) + '\n');
+                child.stdin.end();
+            }
+            catch {
+                // stdin 写入失败（如使用 main.py --json 模式时不依赖 stdin）
+            }
+        });
+    }
+    // ==========================================================================
+    // Internal: Helpers
+    // ==========================================================================
+    /** 构建 Stage 输入参数 */
+    _buildStageInput(stage, target, disease, cancerTypes, ensgId, options, previousStages) {
+        switch (stage) {
+            case 'expression':
+                return {
+                    gene_symbol: target,
+                    cancer_types: cancerTypes,
+                    ensg_id: ensgId,
+                };
+            case 'screening':
+                return {
+                    disease,
+                    exclude_targets: [target],
+                    top_n: 20,
+                };
+            case 'deep_research':
+                return {
+                    target_name: target,
+                    ensg_id: ensgId,
+                    disease,
+                };
+            case 'business':
+                return {
+                    target_name: target,
+                    disease,
+                    modality: options?.modality,
+                    risk_level: options?.riskLevel,
+                    stage1_data: previousStages.expression?.data,
+                    stage2_data: previousStages.screening?.data,
+                    stage3_data: previousStages.deep_research?.data,
+                };
+        }
+    }
+    /** 从 stdout 中提取最后一个完整的 JSON 对象 */
+    _extractLastJson(stdout) {
+        const trimmed = stdout.trim();
+        if (!trimmed)
+            return null;
+        // 如果整个 stdout 就是一个 JSON 对象
+        if (trimmed.startsWith('{') && trimmed.endsWith('}')) {
+            return trimmed;
+        }
+        // 尝试从最后一行开始找 JSON
+        const lines = trimmed.split('\n').filter(l => l.trim());
+        for (let i = lines.length - 1; i >= 0; i--) {
+            const line = lines[i].trim();
+            if (line.startsWith('{') && line.endsWith('}')) {
+                return line;
+            }
+        }
+        // 最后手段：找最后一个 { 到最后一个 }
+        const lastBrace = trimmed.lastIndexOf('}');
+        const firstBrace = trimmed.indexOf('{');
+        if (firstBrace !== -1 && lastBrace > firstBrace) {
+            return trimmed.slice(firstBrace, lastBrace + 1);
+        }
+        return null;
+    }
+    /** 获取 Python 版本号 */
+    async _getPythonVersion() {
+        return new Promise((resolveVersion, reject) => {
+            const child = spawn(this.config.pythonPath, ['--version'], { stdio: 'pipe' });
+            let output = '';
+            child.stdout.on('data', (chunk) => { output += chunk.toString(); });
+            child.stderr.on('data', (chunk) => { output += chunk.toString(); });
+            child.on('close', (code) => {
+                if (code === 0 && output.trim()) {
+                    resolveVersion(output.trim());
+                }
+                else {
+                    reject(new Error(`Python --version failed: ${output}`));
+                }
+            });
+            child.on('error', reject);
+        });
+    }
+    /** 构建错误响应 */
+    _makeErrorResponse(requestId, stage, error) {
+        return {
+            protocol: BRIDGE_PROTOCOL_VERSION,
+            request_id: requestId,
+            success: false,
+            stage,
+            error,
+            duration_ms: 0,
+        };
+    }
+    /** 保存检查点 */
+    _saveCheckpoint(projectId, checkpoint) {
+        this.checkpoints.set(projectId, checkpoint);
+        logger.info({ projectId, completedStages: checkpoint.completedStages }, 'Checkpoint saved');
+    }
+}
+/** 创建 PythonBridge 实例 */
+export function createPythonBridge(config) {
+    return new PythonBridge(config);
+}
+//# sourceMappingURL=PythonBridge.js.map

package/dist/bridge/PythonBridge.js.map

@@ -0,0 +1 @@
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package/dist/bridge/index.d.ts

@@ -0,0 +1,2 @@
+export * from './types.js';
+export { PythonBridge, createPythonBridge } from './PythonBridge.js';

package/dist/bridge/index.js

@@ -0,0 +1,7 @@
+// SCALE Engine — Python-TS Bridge Module (v1.0.0)
+// Python 桥接层公共 API
+// Types
+export * from './types.js';
+// Core Engine
+export { PythonBridge, createPythonBridge } from './PythonBridge.js';
+//# sourceMappingURL=index.js.map

package/dist/bridge/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/bridge/index.ts"],"names":[],"mappings":"AAAA,kDAAkD;AAClD,mBAAmB;AAEnB,QAAQ;AACR,cAAc,YAAY,CAAA;AAE1B,cAAc;AACd,OAAO,EAAE,YAAY,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAA"}

package/dist/bridge/medicalWorkflows.d.ts

@@ -0,0 +1,29 @@
+import type { WorkflowDefinition } from '../agents/types.js';
+/**
+ * 完整医学研究管线 (4-Stage Sequential Pipeline)
+ *
+ * DAG:
+ *   expression ─────────┬──→ screening ──┬──→ business
+ *                       │                │
+ *                       └──→ deep_research┘
+ *
+ * 注意: screening 和 deep_research 可以并行
+ */
+export declare const MEDICAL_RESEARCH_PIPELINE: WorkflowDefinition;
+/**
+ * 仅表达分析 (Stage 1)
+ */
+export declare const EXPRESSION_ONLY: WorkflowDefinition;
+/**
+ * 表达 + 筛选 (Stage 1+2)
+ */
+export declare const EXPRESSION_AND_SCREENING: WorkflowDefinition;
+export declare const MEDICAL_WORKFLOWS: Record<string, WorkflowDefinition>;
+/**
+ * 获取医学研究工作流定义
+ */
+export declare function getMedicalWorkflow(name: string): WorkflowDefinition | undefined;
+/**
+ * 列出所有医学研究工作流
+ */
+export declare function listMedicalWorkflows(): WorkflowDefinition[];

package/dist/bridge/medicalWorkflows.js

@@ -0,0 +1,156 @@
+// SCALE Engine — Medical Research Workflow Presets (v1.0.0)
+// 医学研究 4-Stage Pipeline 工作流预设
+// 对应架构文档中的 4-Stage Pipeline DAG
+// ============================================================================
+// LLM Config — 医学研究工作流 LLM 配置
+// ============================================================================
+const MEDICAL_RESEARCH_LLM = {
+    provider: 'deepseek',
+    model: 'deepseek-chat',
+    baseUrl: 'https://api.deepseek.com/v1',
+};
+// ============================================================================
+// 4-Stage Pipeline Steps
+// ============================================================================
+/**
+ * Stage 1: 表达分析 (Expression Analysis)
+ *
+ * 并行子步骤: GTEx + TCGA + HPA → 汇总 → 生存分析 + 免疫分析
+ * 这些子步骤由 Python Stage1Pipeline 内部编排，
+ * TS 侧只看到一个 "expression" 步骤
+ */
+const EXPRESSION_STEP = {
+    id: 'expression',
+    role: 'medical/expression-analyzer',
+    task: '执行靶点表达全景与预后挖掘：GTEx组织表达、TCGA肿瘤差异、HPA蛋白验证、生存分析、免疫浸润',
+    output: 'expression_result',
+    retry: 2,
+    timeout: 300,
+};
+/**
+ * Stage 2: 靶点筛选 (Target Screening)
+ *
+ * 依赖 Stage 1 输出
+ */
+const SCREENING_STEP = {
+    id: 'screening',
+    role: 'medical/screening-analyzer',
+    task: '执行多维靶点筛选与优先级排序：GEO差异表达、OpenTargets成药性、综合评分排序',
+    output: 'screening_result',
+    depends_on: ['expression'],
+    retry: 2,
+    timeout: 300,
+};
+/**
+ * Stage 3: 深度调研 (Deep Research)
+ *
+ * 依赖 Stage 1 输出 (ensg_id)
+ */
+const DEEP_RESEARCH_STEP = {
+    id: 'deep_research',
+    role: 'medical/deep-researcher',
+    task: '执行靶点深度调研与赛道格局分析：UniProt功能百科、PubMed文献综述、竞品分析',
+    output: 'deep_research_result',
+    depends_on: ['expression'],
+    retry: 2,
+    timeout: 300,
+};
+/**
+ * Stage 4: 商业规划 (Business Planning)
+ *
+ * 依赖前三个阶段输出
+ */
+const BUSINESS_STEP = {
+    id: 'business',
+    role: 'medical/business-planner',
+    task: '生成商业计划书与里程碑规划：整合前序分析数据、里程碑规划、竞品格局、商业计划书',
+    output: 'business_result',
+    depends_on: ['screening', 'deep_research'],
+    retry: 1,
+    timeout: 300,
+};
+// ============================================================================
+// Workflow Definitions
+// ============================================================================
+/**
+ * 完整医学研究管线 (4-Stage Sequential Pipeline)
+ *
+ * DAG:
+ *   expression ─────────┬──→ screening ──┬──→ business
+ *                       │                │
+ *                       └──→ deep_research┘
+ *
+ * 注意: screening 和 deep_research 可以并行
+ */
+export const MEDICAL_RESEARCH_PIPELINE = {
+    name: 'medical-research-pipeline',
+    description: '药物靶点智能研究 4-Stage Pipeline: 表达分析→靶点筛选→深度调研→商业规划',
+    version: '1.0.0',
+    llm: MEDICAL_RESEARCH_LLM,
+    concurrency: 2,
+    inputs: [
+        { name: 'target', required: true, description: '靶点基因符号 (如 CDK4)' },
+        { name: 'disease', required: true, description: '疾病名称 (如 breast cancer)' },
+        { name: 'cancer_types', required: true, description: '癌种代码列表 (如 BRCA LUAD)' },
+        { name: 'ensg_id', required: false, description: 'Ensembl Gene ID' },
+        { name: 'modality', required: false, default: 'small_molecule', description: '药物形式' },
+        { name: 'risk_level', required: false, default: 'medium', description: '风险等级' },
+    ],
+    steps: [EXPRESSION_STEP, SCREENING_STEP, DEEP_RESEARCH_STEP, BUSINESS_STEP],
+    output_dir: './output',
+};
+/**
+ * 仅表达分析 (Stage 1)
+ */
+export const EXPRESSION_ONLY = {
+    name: 'expression-analysis',
+    description: '靶点表达全景与预后挖掘 (Stage 1 only)',
+    version: '1.0.0',
+    llm: MEDICAL_RESEARCH_LLM,
+    concurrency: 1,
+    inputs: [
+        { name: 'gene_symbol', required: true, description: '基因符号' },
+        { name: 'cancer_types', required: true, description: '癌种代码列表' },
+        { name: 'ensg_id', required: false, description: 'Ensembl Gene ID' },
+    ],
+    steps: [EXPRESSION_STEP],
+    output_dir: './output/stage1',
+};
+/**
+ * 表达 + 筛选 (Stage 1+2)
+ */
+export const EXPRESSION_AND_SCREENING = {
+    name: 'expression-and-screening',
+    description: '表达分析 + 靶点筛选 (Stage 1+2)',
+    version: '1.0.0',
+    llm: MEDICAL_RESEARCH_LLM,
+    concurrency: 1,
+    inputs: [
+        { name: 'target', required: true, description: '靶点基因符号' },
+        { name: 'disease', required: true, description: '疾病名称' },
+        { name: 'cancer_types', required: true, description: '癌种代码列表' },
+    ],
+    steps: [EXPRESSION_STEP, SCREENING_STEP],
+    output_dir: './output',
+};
+// ============================================================================
+// Workflow Registry
+// ============================================================================
+export const MEDICAL_WORKFLOWS = {
+    [MEDICAL_RESEARCH_PIPELINE.name]: MEDICAL_RESEARCH_PIPELINE,
+    [EXPRESSION_ONLY.name]: EXPRESSION_ONLY,
+    [EXPRESSION_AND_SCREENING.name]: EXPRESSION_AND_SCREENING,
+};
+/**
+ * 获取医学研究工作流定义
+ */
+export function getMedicalWorkflow(name) {
+    return MEDICAL_WORKFLOWS[name];
+}
+/**
+ * 列出所有医学研究工作流
+ */
+export function listMedicalWorkflows() {
+    return Object.values(MEDICAL_WORKFLOWS);
+}
+//# sourceMappingURL=medicalWorkflows.js.map