@hongmaple0820/med-scale-research-os 0.43.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1104) hide show
  1. package/.scale/mcp-servers.yaml +144 -0
  2. package/.scale/skills.json +830 -0
  3. package/.scale/verification.json +52 -0
  4. package/LICENSE +15 -0
  5. package/README.en.md +156 -0
  6. package/README.md +156 -0
  7. package/dist/adapters/AiderAdapter.d.ts +22 -0
  8. package/dist/adapters/AiderAdapter.js +262 -0
  9. package/dist/adapters/AiderAdapter.js.map +1 -0
  10. package/dist/adapters/AntigravityAdapter.d.ts +4 -0
  11. package/dist/adapters/AntigravityAdapter.js +21 -0
  12. package/dist/adapters/AntigravityAdapter.js.map +1 -0
  13. package/dist/adapters/ClaudeCodeAdapter.d.ts +54 -0
  14. package/dist/adapters/ClaudeCodeAdapter.js +185 -0
  15. package/dist/adapters/ClaudeCodeAdapter.js.map +1 -0
  16. package/dist/adapters/ClineAdapter.d.ts +4 -0
  17. package/dist/adapters/ClineAdapter.js +20 -0
  18. package/dist/adapters/ClineAdapter.js.map +1 -0
  19. package/dist/adapters/CodexAdapter.d.ts +15 -0
  20. package/dist/adapters/CodexAdapter.js +160 -0
  21. package/dist/adapters/CodexAdapter.js.map +1 -0
  22. package/dist/adapters/CursorAdapter.d.ts +14 -0
  23. package/dist/adapters/CursorAdapter.js +171 -0
  24. package/dist/adapters/CursorAdapter.js.map +1 -0
  25. package/dist/adapters/DeepSeekTuiAdapter.d.ts +19 -0
  26. package/dist/adapters/DeepSeekTuiAdapter.js +263 -0
  27. package/dist/adapters/DeepSeekTuiAdapter.js.map +1 -0
  28. package/dist/adapters/DoubaoAdapter.d.ts +14 -0
  29. package/dist/adapters/DoubaoAdapter.js +184 -0
  30. package/dist/adapters/DoubaoAdapter.js.map +1 -0
  31. package/dist/adapters/GeminiAdapter.d.ts +14 -0
  32. package/dist/adapters/GeminiAdapter.js +163 -0
  33. package/dist/adapters/GeminiAdapter.js.map +1 -0
  34. package/dist/adapters/GenericProjectAgentAdapter.d.ts +29 -0
  35. package/dist/adapters/GenericProjectAgentAdapter.js +204 -0
  36. package/dist/adapters/GenericProjectAgentAdapter.js.map +1 -0
  37. package/dist/adapters/HermesAdapter.d.ts +14 -0
  38. package/dist/adapters/HermesAdapter.js +163 -0
  39. package/dist/adapters/HermesAdapter.js.map +1 -0
  40. package/dist/adapters/JCodeAdapter.d.ts +4 -0
  41. package/dist/adapters/JCodeAdapter.js +19 -0
  42. package/dist/adapters/JCodeAdapter.js.map +1 -0
  43. package/dist/adapters/KiloCodeAdapter.d.ts +4 -0
  44. package/dist/adapters/KiloCodeAdapter.js +20 -0
  45. package/dist/adapters/KiloCodeAdapter.js.map +1 -0
  46. package/dist/adapters/KimiAdapter.d.ts +14 -0
  47. package/dist/adapters/KimiAdapter.js +183 -0
  48. package/dist/adapters/KimiAdapter.js.map +1 -0
  49. package/dist/adapters/KiroAdapter.d.ts +14 -0
  50. package/dist/adapters/KiroAdapter.js +180 -0
  51. package/dist/adapters/KiroAdapter.js.map +1 -0
  52. package/dist/adapters/OpenClawAdapter.d.ts +14 -0
  53. package/dist/adapters/OpenClawAdapter.js +163 -0
  54. package/dist/adapters/OpenClawAdapter.js.map +1 -0
  55. package/dist/adapters/OpenCodeAdapter.d.ts +14 -0
  56. package/dist/adapters/OpenCodeAdapter.js +172 -0
  57. package/dist/adapters/OpenCodeAdapter.js.map +1 -0
  58. package/dist/adapters/QCoderAdapter.d.ts +14 -0
  59. package/dist/adapters/QCoderAdapter.js +159 -0
  60. package/dist/adapters/QCoderAdapter.js.map +1 -0
  61. package/dist/adapters/QoderAdapter.d.ts +4 -0
  62. package/dist/adapters/QoderAdapter.js +21 -0
  63. package/dist/adapters/QoderAdapter.js.map +1 -0
  64. package/dist/adapters/TraeAdapter.d.ts +14 -0
  65. package/dist/adapters/TraeAdapter.js +159 -0
  66. package/dist/adapters/TraeAdapter.js.map +1 -0
  67. package/dist/adapters/VSCAdapter.d.ts +14 -0
  68. package/dist/adapters/VSCAdapter.js +159 -0
  69. package/dist/adapters/VSCAdapter.js.map +1 -0
  70. package/dist/adapters/WindsurfAdapter.d.ts +14 -0
  71. package/dist/adapters/WindsurfAdapter.js +185 -0
  72. package/dist/adapters/WindsurfAdapter.js.map +1 -0
  73. package/dist/adapters/WorkBuddyAdapter.d.ts +14 -0
  74. package/dist/adapters/WorkBuddyAdapter.js +159 -0
  75. package/dist/adapters/WorkBuddyAdapter.js.map +1 -0
  76. package/dist/adapters/index.d.ts +32 -0
  77. package/dist/adapters/index.js +87 -0
  78. package/dist/adapters/index.js.map +1 -0
  79. package/dist/agents/AgentChannel.d.ts +43 -0
  80. package/dist/agents/AgentChannel.js +136 -0
  81. package/dist/agents/AgentChannel.js.map +1 -0
  82. package/dist/agents/AgentCoordinator.d.ts +29 -0
  83. package/dist/agents/AgentCoordinator.js +136 -0
  84. package/dist/agents/AgentCoordinator.js.map +1 -0
  85. package/dist/agents/AgentDispatcher.d.ts +24 -0
  86. package/dist/agents/AgentDispatcher.js +112 -0
  87. package/dist/agents/AgentDispatcher.js.map +1 -0
  88. package/dist/agents/AgentManager.d.ts +14 -0
  89. package/dist/agents/AgentManager.js +85 -0
  90. package/dist/agents/AgentManager.js.map +1 -0
  91. package/dist/agents/AgentPool.d.ts +59 -0
  92. package/dist/agents/AgentPool.js +192 -0
  93. package/dist/agents/AgentPool.js.map +1 -0
  94. package/dist/agents/AgentRegistry.d.ts +20 -0
  95. package/dist/agents/AgentRegistry.js +36 -0
  96. package/dist/agents/AgentRegistry.js.map +1 -0
  97. package/dist/agents/AgentSourceLoader.d.ts +73 -0
  98. package/dist/agents/AgentSourceLoader.js +103 -0
  99. package/dist/agents/AgentSourceLoader.js.map +1 -0
  100. package/dist/agents/IAgent.d.ts +53 -0
  101. package/dist/agents/IAgent.js +4 -0
  102. package/dist/agents/IAgent.js.map +1 -0
  103. package/dist/agents/LeadershipPresets.d.ts +16 -0
  104. package/dist/agents/LeadershipPresets.js +152 -0
  105. package/dist/agents/LeadershipPresets.js.map +1 -0
  106. package/dist/agents/definitions/debugger.d.ts +2 -0
  107. package/dist/agents/definitions/debugger.js +6 -0
  108. package/dist/agents/definitions/debugger.js.map +1 -0
  109. package/dist/agents/definitions/doc-writer.d.ts +2 -0
  110. package/dist/agents/definitions/doc-writer.js +6 -0
  111. package/dist/agents/definitions/doc-writer.js.map +1 -0
  112. package/dist/agents/definitions/implementer.d.ts +2 -0
  113. package/dist/agents/definitions/implementer.js +6 -0
  114. package/dist/agents/definitions/implementer.js.map +1 -0
  115. package/dist/agents/definitions/planner.d.ts +2 -0
  116. package/dist/agents/definitions/planner.js +6 -0
  117. package/dist/agents/definitions/planner.js.map +1 -0
  118. package/dist/agents/definitions/researcher.d.ts +2 -0
  119. package/dist/agents/definitions/researcher.js +6 -0
  120. package/dist/agents/definitions/researcher.js.map +1 -0
  121. package/dist/agents/definitions/reviewer.d.ts +2 -0
  122. package/dist/agents/definitions/reviewer.js +6 -0
  123. package/dist/agents/definitions/reviewer.js.map +1 -0
  124. package/dist/agents/definitions/security.d.ts +2 -0
  125. package/dist/agents/definitions/security.js +6 -0
  126. package/dist/agents/definitions/security.js.map +1 -0
  127. package/dist/agents/definitions/tester.d.ts +2 -0
  128. package/dist/agents/definitions/tester.js +6 -0
  129. package/dist/agents/definitions/tester.js.map +1 -0
  130. package/dist/agents/index.d.ts +23 -0
  131. package/dist/agents/index.js +44 -0
  132. package/dist/agents/index.js.map +1 -0
  133. package/dist/agents/profiles.d.ts +26 -0
  134. package/dist/agents/profiles.js +197 -0
  135. package/dist/agents/profiles.js.map +1 -0
  136. package/dist/agents/types.d.ts +262 -0
  137. package/dist/agents/types.js +4 -0
  138. package/dist/agents/types.js.map +1 -0
  139. package/dist/api/cli.d.ts +2 -0
  140. package/dist/api/cli.js +6678 -0
  141. package/dist/api/cli.js.map +1 -0
  142. package/dist/api/doctor.d.ts +83 -0
  143. package/dist/api/doctor.js +982 -0
  144. package/dist/api/doctor.js.map +1 -0
  145. package/dist/api/mcp.d.ts +32 -0
  146. package/dist/api/mcp.js +223 -0
  147. package/dist/api/mcp.js.map +1 -0
  148. package/dist/api/medscale.d.ts +2 -0
  149. package/dist/api/medscale.js +20 -0
  150. package/dist/api/medscale.js.map +1 -0
  151. package/dist/api/quickstart.d.ts +86 -0
  152. package/dist/api/quickstart.js +291 -0
  153. package/dist/api/quickstart.js.map +1 -0
  154. package/dist/artifact/fsm.d.ts +41 -0
  155. package/dist/artifact/fsm.js +221 -0
  156. package/dist/artifact/fsm.js.map +1 -0
  157. package/dist/artifact/fsmDefinitions.d.ts +18 -0
  158. package/dist/artifact/fsmDefinitions.js +296 -0
  159. package/dist/artifact/fsmDefinitions.js.map +1 -0
  160. package/dist/artifact/sqliteStore.d.ts +61 -0
  161. package/dist/artifact/sqliteStore.js +381 -0
  162. package/dist/artifact/sqliteStore.js.map +1 -0
  163. package/dist/artifact/store.d.ts +49 -0
  164. package/dist/artifact/store.js +116 -0
  165. package/dist/artifact/store.js.map +1 -0
  166. package/dist/artifact/types.d.ts +535 -0
  167. package/dist/artifact/types.js +74 -0
  168. package/dist/artifact/types.js.map +1 -0
  169. package/dist/bootstrap/DependencyBootstrap.d.ts +112 -0
  170. package/dist/bootstrap/DependencyBootstrap.js +1046 -0
  171. package/dist/bootstrap/DependencyBootstrap.js.map +1 -0
  172. package/dist/bootstrap/DependencyBootstrapRenderer.d.ts +3 -0
  173. package/dist/bootstrap/DependencyBootstrapRenderer.js +138 -0
  174. package/dist/bootstrap/DependencyBootstrapRenderer.js.map +1 -0
  175. package/dist/bridge/PythonBridge.d.ts +80 -0
  176. package/dist/bridge/PythonBridge.js +437 -0
  177. package/dist/bridge/PythonBridge.js.map +1 -0
  178. package/dist/bridge/index.d.ts +2 -0
  179. package/dist/bridge/index.js +7 -0
  180. package/dist/bridge/index.js.map +1 -0
  181. package/dist/bridge/medicalWorkflows.d.ts +29 -0
  182. package/dist/bridge/medicalWorkflows.js +156 -0
  183. package/dist/bridge/medicalWorkflows.js.map +1 -0
  184. package/dist/bridge/types.d.ts +381 -0
  185. package/dist/bridge/types.js +113 -0
  186. package/dist/bridge/types.js.map +1 -0
  187. package/dist/cache/ScanCache.d.ts +41 -0
  188. package/dist/cache/ScanCache.js +120 -0
  189. package/dist/cache/ScanCache.js.map +1 -0
  190. package/dist/capabilities/BrowserCapability.d.ts +30 -0
  191. package/dist/capabilities/BrowserCapability.js +73 -0
  192. package/dist/capabilities/BrowserCapability.js.map +1 -0
  193. package/dist/capabilities/BrowserQACapability.d.ts +165 -0
  194. package/dist/capabilities/BrowserQACapability.js +438 -0
  195. package/dist/capabilities/BrowserQACapability.js.map +1 -0
  196. package/dist/capabilities/CapabilityRegistry.d.ts +17 -0
  197. package/dist/capabilities/CapabilityRegistry.js +65 -0
  198. package/dist/capabilities/CapabilityRegistry.js.map +1 -0
  199. package/dist/capabilities/ComputerCapability.d.ts +28 -0
  200. package/dist/capabilities/ComputerCapability.js +40 -0
  201. package/dist/capabilities/ComputerCapability.js.map +1 -0
  202. package/dist/capabilities/InstalledSkillsIntegration.d.ts +69 -0
  203. package/dist/capabilities/InstalledSkillsIntegration.js +240 -0
  204. package/dist/capabilities/InstalledSkillsIntegration.js.map +1 -0
  205. package/dist/capabilities/SearchCapability.d.ts +46 -0
  206. package/dist/capabilities/SearchCapability.js +88 -0
  207. package/dist/capabilities/SearchCapability.js.map +1 -0
  208. package/dist/capabilities/index.d.ts +6 -0
  209. package/dist/capabilities/index.js +9 -0
  210. package/dist/capabilities/index.js.map +1 -0
  211. package/dist/capabilities/types.d.ts +92 -0
  212. package/dist/capabilities/types.js +7 -0
  213. package/dist/capabilities/types.js.map +1 -0
  214. package/dist/cli/autofixCommands.d.ts +22 -0
  215. package/dist/cli/autofixCommands.js +32 -0
  216. package/dist/cli/autofixCommands.js.map +1 -0
  217. package/dist/cli/cortexCommands.d.ts +71 -0
  218. package/dist/cli/cortexCommands.js +335 -0
  219. package/dist/cli/cortexCommands.js.map +1 -0
  220. package/dist/cli/costCommands.d.ts +13 -0
  221. package/dist/cli/costCommands.js +48 -0
  222. package/dist/cli/costCommands.js.map +1 -0
  223. package/dist/cli/evolutionCommands.d.ts +112 -0
  224. package/dist/cli/evolutionCommands.js +246 -0
  225. package/dist/cli/evolutionCommands.js.map +1 -0
  226. package/dist/cli/gateStatusCommands.d.ts +1 -0
  227. package/dist/cli/gateStatusCommands.js +52 -0
  228. package/dist/cli/gateStatusCommands.js.map +1 -0
  229. package/dist/cli/liteCommands.d.ts +81 -0
  230. package/dist/cli/liteCommands.js +148 -0
  231. package/dist/cli/liteCommands.js.map +1 -0
  232. package/dist/cli/orchCommands.d.ts +43 -0
  233. package/dist/cli/orchCommands.js +135 -0
  234. package/dist/cli/orchCommands.js.map +1 -0
  235. package/dist/cli/phaseCommands.d.ts +248 -0
  236. package/dist/cli/phaseCommands.js +1878 -0
  237. package/dist/cli/phaseCommands.js.map +1 -0
  238. package/dist/cli/promptCommands.d.ts +1 -0
  239. package/dist/cli/promptCommands.js +57 -0
  240. package/dist/cli/promptCommands.js.map +1 -0
  241. package/dist/cli/qaCommands.d.ts +22 -0
  242. package/dist/cli/qaCommands.js +84 -0
  243. package/dist/cli/qaCommands.js.map +1 -0
  244. package/dist/cli/quickstartCommands.d.ts +17 -0
  245. package/dist/cli/quickstartCommands.js +47 -0
  246. package/dist/cli/quickstartCommands.js.map +1 -0
  247. package/dist/cli/runCommand.d.ts +39 -0
  248. package/dist/cli/runCommand.js +113 -0
  249. package/dist/cli/runCommand.js.map +1 -0
  250. package/dist/cli/scoreCommands.d.ts +1 -0
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  253. package/dist/cli/shieldCommands.d.ts +30 -0
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  256. package/dist/cli/targetCommands.d.ts +552 -0
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  259. package/dist/cli/tuiCommands.d.ts +7 -0
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  262. package/dist/cli/vibeCommands.d.ts +64 -0
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  265. package/dist/codegraph/CodeIntelligence.d.ts +147 -0
  266. package/dist/codegraph/CodeIntelligence.js +681 -0
  267. package/dist/codegraph/CodeIntelligence.js.map +1 -0
  268. package/dist/config/profiles.d.ts +64 -0
  269. package/dist/config/profiles.js +223 -0
  270. package/dist/config/profiles.js.map +1 -0
  271. package/dist/context/AntiPatternRegistry.d.ts +38 -0
  272. package/dist/context/AntiPatternRegistry.js +203 -0
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  274. package/dist/context/CavemanCompressor.d.ts +20 -0
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  277. package/dist/context/ContextBudget.d.ts +128 -0
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  280. package/dist/context/ContextBuilder.d.ts +71 -0
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  286. package/dist/context/ProjectAnatomy.d.ts +18 -0
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  289. package/dist/context/SessionStartSequence.d.ts +54 -0
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  292. package/dist/core/ExternalCommand.d.ts +9 -0
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  295. package/dist/core/GbrainRuntime.d.ts +25 -0
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  298. package/dist/core/container.d.ts +14 -0
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  307. package/dist/cortex/GovernanceMetrics.d.ts +66 -0
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  310. package/dist/cortex/InstinctExtractor.d.ts +61 -0
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  319. package/dist/cortex/SessionInjector.d.ts +44 -0
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  322. package/dist/cortex/adapters/ClaudeAdapter.d.ts +17 -0
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  325. package/dist/cortex/adapters/CodexAdapter.d.ts +10 -0
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  328. package/dist/cortex/adapters/CursorAdapter.d.ts +10 -0
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  337. package/dist/dashboard/MedicalWorkflowData.d.ts +155 -0
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  343. package/dist/dashboard/index.d.ts +4 -0
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  346. package/dist/dashboard/server.d.ts +52 -0
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  349. package/dist/env/EnvironmentDoctor.d.ts +66 -0
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  1059. package/target-research-platform/src/analysis/stage3_deep_research/competitive_landscape.py +479 -0
  1060. package/target-research-platform/src/analysis/stage3_deep_research/pipeline.py +763 -0
  1061. package/target-research-platform/src/analysis/stage3_deep_research/target_function.py +290 -0
  1062. package/target-research-platform/src/analysis/stage4_business/__init__.py +12 -0
  1063. package/target-research-platform/src/analysis/stage4_business/business_plan.py +816 -0
  1064. package/target-research-platform/src/analysis/stage4_business/milestone_planner.py +844 -0
  1065. package/target-research-platform/src/analysis/stage4_business/pipeline.py +284 -0
  1066. package/target-research-platform/src/api_clients/__init__.py +29 -0
  1067. package/target-research-platform/src/api_clients/aminer_client.py +163 -0
  1068. package/target-research-platform/src/api_clients/base_client.py +186 -0
  1069. package/target-research-platform/src/api_clients/clinicaltrials_client.py +411 -0
  1070. package/target-research-platform/src/api_clients/geo_client.py +1420 -0
  1071. package/target-research-platform/src/api_clients/gtex_client.py +209 -0
  1072. package/target-research-platform/src/api_clients/hpa_client.py +170 -0
  1073. package/target-research-platform/src/api_clients/immune_data_manager.py +247 -0
  1074. package/target-research-platform/src/api_clients/openalex_client.py +86 -0
  1075. package/target-research-platform/src/api_clients/opentargets_client.py +558 -0
  1076. package/target-research-platform/src/api_clients/pubmed_client.py +361 -0
  1077. package/target-research-platform/src/api_clients/tcga_client.py +712 -0
  1078. package/target-research-platform/src/api_clients/timer_client.py +169 -0
  1079. package/target-research-platform/src/dashboard/app.py +2283 -0
  1080. package/target-research-platform/src/dashboard/deliverables.py +710 -0
  1081. package/target-research-platform/src/dashboard/static/artifactPreview.js +96 -0
  1082. package/target-research-platform/src/dashboard/static/index.html +1292 -0
  1083. package/target-research-platform/src/dashboard/status_tracker.py +237 -0
  1084. package/target-research-platform/src/output/__init__.py +42 -0
  1085. package/target-research-platform/src/output/agent_llm_provider.py +171 -0
  1086. package/target-research-platform/src/output/chart_generator.py +550 -0
  1087. package/target-research-platform/src/output/data_exporter.py +215 -0
  1088. package/target-research-platform/src/output/delivery_packager.py +791 -0
  1089. package/target-research-platform/src/output/evidence_package.py +230 -0
  1090. package/target-research-platform/src/output/journal_templates.py +193 -0
  1091. package/target-research-platform/src/output/literature_enricher.py +395 -0
  1092. package/target-research-platform/src/output/literature_reviewer.py +420 -0
  1093. package/target-research-platform/src/output/manuscript_fact_checker.py +279 -0
  1094. package/target-research-platform/src/output/manuscript_generator.py +1189 -0
  1095. package/target-research-platform/src/output/manuscript_quality.py +401 -0
  1096. package/target-research-platform/src/output/medical_skills_bridge.py +140 -0
  1097. package/target-research-platform/src/output/report_generator.py +542 -0
  1098. package/target-research-platform/src/output/usage_envelope.py +193 -0
  1099. package/target-research-platform/src/utils/__init__.py +1 -0
  1100. package/target-research-platform/src/utils/config.py +125 -0
  1101. package/target-research-platform/src/utils/logger.py +71 -0
  1102. package/target-research-platform/src/validators/__init__.py +13 -0
  1103. package/target-research-platform/src/validators/cross_validator.py +394 -0
  1104. package/target-research-platform/src/validators/data_provenance.py +298 -0
@@ -0,0 +1,233 @@
1
+ import { existsSync, mkdirSync, readFileSync, writeFileSync } from 'node:fs';
2
+ import { dirname, join, normalize } from 'node:path';
3
+ const CONTEXT_CANDIDATES = ['CONTEXT.md', 'docs/CONTEXT.md'];
4
+ const CONTEXT_MAP_CANDIDATES = ['CONTEXT-MAP.md', 'docs/CONTEXT-MAP.md'];
5
+ export function analyzeContextGovernance(input) {
6
+ const projectDir = input.projectDir;
7
+ const contextPath = firstExisting(projectDir, CONTEXT_CANDIDATES);
8
+ const contextMapPath = firstExisting(projectDir, CONTEXT_MAP_CANDIDATES);
9
+ const findings = [];
10
+ const terms = contextPath ? parseContextTerms(readFileSync(contextPath, 'utf-8')) : [];
11
+ const contextMap = contextMapPath ? parseContextMap(readFileSync(contextMapPath, 'utf-8')) : new Map();
12
+ const moduleDocs = resolveModuleDocs(projectDir, input.changedFiles ?? [], contextMap);
13
+ if (!contextPath) {
14
+ findings.push({
15
+ code: 'missing-context-doc',
16
+ severity: 'error',
17
+ message: 'Missing CONTEXT.md. Domain language, aliases, and rejected meanings are not durable.',
18
+ });
19
+ }
20
+ if (!contextMapPath) {
21
+ findings.push({
22
+ code: 'missing-context-map',
23
+ severity: 'error',
24
+ message: 'Missing CONTEXT-MAP.md. Module ownership and product/architecture document links are not durable.',
25
+ });
26
+ }
27
+ for (const doc of moduleDocs) {
28
+ if (!doc.productDocExists || !doc.architectureDocExists) {
29
+ findings.push({
30
+ code: 'missing-module-doc',
31
+ severity: 'error',
32
+ path: doc.moduleName,
33
+ message: `Module ${doc.moduleName} is touched but product or architecture docs are missing.`,
34
+ });
35
+ }
36
+ }
37
+ const questions = buildContextQuestions(input.request, findings, moduleDocs);
38
+ const requiredArtifacts = unique([
39
+ !contextPath ? 'CONTEXT.md' : undefined,
40
+ !contextMapPath ? 'CONTEXT-MAP.md' : undefined,
41
+ ...moduleDocs.flatMap(doc => [
42
+ doc.productDocExists ? undefined : doc.productDocPath,
43
+ doc.architectureDocExists ? undefined : doc.architectureDocPath,
44
+ ]),
45
+ ].filter(Boolean));
46
+ return {
47
+ ok: !findings.some(finding => finding.severity === 'error'),
48
+ projectDir,
49
+ request: input.request,
50
+ contextPath,
51
+ contextMapPath,
52
+ terms,
53
+ moduleDocs,
54
+ findings,
55
+ questions,
56
+ requiredArtifacts,
57
+ };
58
+ }
59
+ export function renderContextGrillPrompt(report) {
60
+ const lines = [];
61
+ lines.push('# Context Grill');
62
+ lines.push('');
63
+ lines.push(`Request: ${report.request}`);
64
+ lines.push(`Status: ${report.ok ? 'ready' : 'blocked'}`);
65
+ lines.push('');
66
+ lines.push('## Evidence');
67
+ lines.push(`- CONTEXT.md: ${report.contextPath ?? 'missing'}`);
68
+ lines.push(`- CONTEXT-MAP.md: ${report.contextMapPath ?? 'missing'}`);
69
+ if (report.terms.length > 0)
70
+ lines.push(`- Terms: ${report.terms.join(', ')}`);
71
+ for (const finding of report.findings) {
72
+ lines.push(`- [${finding.severity.toUpperCase()}] ${finding.code}: ${finding.message}`);
73
+ }
74
+ lines.push('');
75
+ lines.push('## Questions');
76
+ for (const question of report.questions) {
77
+ const marker = question.blocking ? 'BLOCKING' : 'CHECK';
78
+ lines.push(`- [${marker}] ${question.question}`);
79
+ lines.push(` Reason: ${question.reason}`);
80
+ }
81
+ return lines.join('\n');
82
+ }
83
+ export function writeContextGovernanceTemplates(input) {
84
+ const projectName = input.projectName ?? 'Project';
85
+ const files = new Map([
86
+ ['CONTEXT.md', contextTemplate(projectName)],
87
+ ['docs/CONTEXT-MAP.md', contextMapTemplate(projectName)],
88
+ ]);
89
+ const created = [];
90
+ const skipped = [];
91
+ for (const [relativePath, content] of files) {
92
+ const filePath = join(input.projectDir, relativePath);
93
+ if (existsSync(filePath) && !input.force) {
94
+ skipped.push(filePath);
95
+ continue;
96
+ }
97
+ mkdirSync(dirname(filePath), { recursive: true });
98
+ writeFileSync(filePath, content, 'utf-8');
99
+ created.push(filePath);
100
+ }
101
+ return { created, skipped };
102
+ }
103
+ function firstExisting(projectDir, candidates) {
104
+ return candidates.map(candidate => join(projectDir, candidate)).find(path => existsSync(path));
105
+ }
106
+ function parseContextTerms(content) {
107
+ const terms = [];
108
+ for (const line of content.split(/\r?\n/)) {
109
+ if (!line.trim().startsWith('|'))
110
+ continue;
111
+ if (/\|\s*Term\s*\|/i.test(line) || /^\|\s*-+/.test(line.trim()))
112
+ continue;
113
+ const parts = line.split('|').map(part => part.trim()).filter(Boolean);
114
+ if (parts.length >= 2 && parts[0] !== '---')
115
+ terms.push(parts[0]);
116
+ }
117
+ return unique(terms);
118
+ }
119
+ function parseContextMap(content) {
120
+ const map = new Map();
121
+ for (const line of content.split(/\r?\n/)) {
122
+ if (!line.trim().startsWith('|'))
123
+ continue;
124
+ if (/\|\s*Module\s*\|/i.test(line) || /^\|\s*-+/.test(line.trim()))
125
+ continue;
126
+ const parts = line.split('|').map(part => part.trim()).filter(Boolean);
127
+ if (parts.length < 4 || parts[0] === '---')
128
+ continue;
129
+ map.set(parts[0], {
130
+ moduleName: parts[0],
131
+ productDocPath: parts[2],
132
+ architectureDocPath: parts[3],
133
+ });
134
+ }
135
+ return map;
136
+ }
137
+ function resolveModuleDocs(projectDir, changedFiles, contextMap) {
138
+ const modules = unique(changedFiles.map(inferModuleName).filter(Boolean));
139
+ return modules.map(moduleName => {
140
+ const mapped = contextMap.get(moduleName);
141
+ const productDocPath = mapped?.productDocPath ?? `docs/modules/${moduleName}/product.md`;
142
+ const architectureDocPath = mapped?.architectureDocPath ?? `docs/modules/${moduleName}/architecture.md`;
143
+ return {
144
+ moduleName,
145
+ productDocPath,
146
+ architectureDocPath,
147
+ productDocExists: existsSync(join(projectDir, productDocPath)),
148
+ architectureDocExists: existsSync(join(projectDir, architectureDocPath)),
149
+ };
150
+ });
151
+ }
152
+ function inferModuleName(filePath) {
153
+ const normalized = normalize(filePath).replace(/\\/g, '/');
154
+ const parts = normalized.split('/').filter(Boolean);
155
+ const roots = new Set(['src', 'app', 'lib', 'services', 'packages', 'modules']);
156
+ if (parts.length >= 2 && roots.has(parts[0]))
157
+ return parts[1];
158
+ return parts[0];
159
+ }
160
+ function buildContextQuestions(request, findings, moduleDocs) {
161
+ const questions = [];
162
+ if (findings.some(finding => finding.code === 'missing-context-doc')) {
163
+ questions.push({
164
+ id: 'context-domain-language',
165
+ topic: 'domain-language',
166
+ question: 'Which domain terms, aliases, and forbidden meanings must be captured before implementation?',
167
+ reason: 'Without a project glossary, agents can invent inconsistent product language.',
168
+ blocking: true,
169
+ });
170
+ }
171
+ if (findings.some(finding => finding.code === 'missing-context-map' || finding.code === 'missing-module-doc')) {
172
+ questions.push({
173
+ id: 'context-module-boundary',
174
+ topic: 'module-boundary',
175
+ question: `Which module owns ${moduleDocs.map(doc => doc.moduleName).join(', ') || 'this change'}, and which product/architecture docs must be updated?`,
176
+ reason: 'Module ownership and document links prevent stale specs and cross-module conflicts.',
177
+ blocking: true,
178
+ });
179
+ }
180
+ if (/\btenant|auth|permission|security|token|quota|delete|payment|migration\b/i.test(request)) {
181
+ questions.push({
182
+ id: 'context-risk-boundary',
183
+ topic: 'risk-and-rollback',
184
+ question: 'What tenant/user isolation, authorization, rollback, and audit evidence is required?',
185
+ reason: 'The request touches a security or data-boundary concern.',
186
+ blocking: true,
187
+ });
188
+ }
189
+ questions.push({
190
+ id: 'context-acceptance-evidence',
191
+ topic: 'acceptance-evidence',
192
+ question: 'Which command output, test report, screenshot, or product artifact will prove this is done?',
193
+ reason: 'Completion claims must be tied to durable evidence.',
194
+ blocking: false,
195
+ });
196
+ return questions;
197
+ }
198
+ function contextTemplate(projectName) {
199
+ return [
200
+ '# CONTEXT.md',
201
+ '',
202
+ `Project: ${projectName}`,
203
+ '',
204
+ '| Term | Definition | Examples | Aliases | Source |',
205
+ '|------|------------|----------|---------|--------|',
206
+ '| User | Person or service account using the product | login user | account | product |',
207
+ '',
208
+ '## Rejected Meanings',
209
+ '',
210
+ '- Record terms that agents must not reinterpret.',
211
+ '',
212
+ ].join('\n');
213
+ }
214
+ function contextMapTemplate(projectName) {
215
+ return [
216
+ '# CONTEXT-MAP.md',
217
+ '',
218
+ `Project: ${projectName}`,
219
+ '',
220
+ '| Module | Owner | Product Doc | Architecture Doc |',
221
+ '| --- | --- | --- | --- |',
222
+ '| example | team | docs/modules/example/product.md | docs/modules/example/architecture.md |',
223
+ '',
224
+ '## Cross-Module Rules',
225
+ '',
226
+ '- Record ownership, upstream/downstream dependencies, and document update triggers here.',
227
+ '',
228
+ ].join('\n');
229
+ }
230
+ function unique(items) {
231
+ return [...new Set(items)];
232
+ }
233
+ //# sourceMappingURL=ContextGovernance.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"ContextGovernance.js","sourceRoot":"","sources":["../../src/workflow/ContextGovernance.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,SAAS,EAAE,YAAY,EAAE,aAAa,EAAE,MAAM,SAAS,CAAA;AAC5E,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,SAAS,EAAE,MAAM,WAAW,CAAA;AA0DpD,MAAM,kBAAkB,GAAG,CAAC,YAAY,EAAE,iBAAiB,CAAC,CAAA;AAC5D,MAAM,sBAAsB,GAAG,CAAC,gBAAgB,EAAE,qBAAqB,CAAC,CAAA;AAExE,MAAM,UAAU,wBAAwB,CAAC,KAAoC;IAC3E,MAAM,UAAU,GAAG,KAAK,CAAC,UAAU,CAAA;IACnC,MAAM,WAAW,GAAG,aAAa,CAAC,UAAU,EAAE,kBAAkB,CAAC,CAAA;IACjE,MAAM,cAAc,GAAG,aAAa,CAAC,UAAU,EAAE,sBAAsB,CAAC,CAAA;IACxE,MAAM,QAAQ,GAAqB,EAAE,CAAA;IACrC,MAAM,KAAK,GAAG,WAAW,CAAC,CAAC,CAAC,iBAAiB,CAAC,YAAY,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAA;IACtF,MAAM,UAAU,GAAG,cAAc,CAAC,CAAC,CAAC,eAAe,CAAC,YAAY,CAAC,cAAc,EAAE,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,GAAG,EAAoC,CAAA;IACxI,MAAM,UAAU,GAAG,iBAAiB,CAAC,UAAU,EAAE,KAAK,CAAC,YAAY,IAAI,EAAE,EAAE,UAAU,CAAC,CAAA;IAEtF,IAAI,CAAC,WAAW,EAAE,CAAC;QACjB,QAAQ,CAAC,IAAI,CAAC;YACZ,IAAI,EAAE,qBAAqB;YAC3B,QAAQ,EAAE,OAAO;YACjB,OAAO,EAAE,sFAAsF;SAChG,CAAC,CAAA;IACJ,CAAC;IACD,IAAI,CAAC,cAAc,EAAE,CAAC;QACpB,QAAQ,CAAC,IAAI,CAAC;YACZ,IAAI,EAAE,qBAAqB;YAC3B,QAAQ,EAAE,OAAO;YACjB,OAAO,EAAE,mGAAmG;SAC7G,CAAC,CAAA;IACJ,CAAC;IACD,KAAK,MAAM,GAAG,IAAI,UAAU,EAAE,CAAC;QAC7B,IAAI,CAAC,GAAG,CAAC,gBAAgB,IAAI,CAAC,GAAG,CAAC,qBAAqB,EAAE,CAAC;YACxD,QAAQ,CAAC,IAAI,CAAC;gBACZ,IAAI,EAAE,oBAAoB;gBAC1B,QAAQ,EAAE,OAAO;gBACjB,IAAI,EAAE,GAAG,CAAC,UAAU;gBACpB,OAAO,EAAE,UAAU,GAAG,CAAC,UAAU,2DAA2D;aAC7F,CAAC,CAAA;QACJ,CAAC;IACH,CAAC;IAED,MAAM,SAAS,GAAG,qBAAqB,CAAC,KAAK,CAAC,OAAO,EAAE,QAAQ,EAAE,UAAU,CAAC,CAAA;IAC5E,MAAM,iBAAiB,GAAG,MAAM,CAAC;QAC/B,CAAC,WAAW,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,SAAS;QACvC,CAAC,cAAc,CAAC,CAAC,CAAC,gBAAgB,CAAC,CAAC,CAAC,SAAS;QAC9C,GAAG,UAAU,CAAC,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC;YAC3B,GAAG,CAAC,gBAAgB,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,GAAG,CAAC,cAAc;YACrD,GAAG,CAAC,qBAAqB,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,GAAG,CAAC,mBAAmB;SAChE,CAAC;KACH,CAAC,MAAM,CAAC,OAAO,CAAa,CAAC,CAAA;IAE9B,OAAO;QACL,EAAE,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC,OAAO,CAAC,QAAQ,KAAK,OAAO,CAAC;QAC3D,UAAU;QACV,OAAO,EAAE,KAAK,CAAC,OAAO;QACtB,WAAW;QACX,cAAc;QACd,KAAK;QACL,UAAU;QACV,QAAQ;QACR,SAAS;QACT,iBAAiB;KAClB,CAAA;AACH,CAAC;AAED,MAAM,UAAU,wBAAwB,CAAC,MAA+B;IACtE,MAAM,KAAK,GAAa,EAAE,CAAA;IAC1B,KAAK,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAA;IAC7B,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;IACd,KAAK,CAAC,IAAI,CAAC,YAAY,MAAM,CAAC,OAAO,EAAE,CAAC,CAAA;IACxC,KAAK,CAAC,IAAI,CAAC,WAAW,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,SAAS,EAAE,CAAC,CAAA;IACxD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;IACd,KAAK,CAAC,IAAI,CAAC,aAAa,CAAC,CAAA;IACzB,KAAK,CAAC,IAAI,CAAC,iBAAiB,MAAM,CAAC,WAAW,IAAI,SAAS,EAAE,CAAC,CAAA;IAC9D,KAAK,CAAC,IAAI,CAAC,qBAAqB,MAAM,CAAC,cAAc,IAAI,SAAS,EAAE,CAAC,CAAA;IACrE,IAAI,MAAM,CAAC,KAAK,CAAC,MAAM,GAAG,CAAC;QAAE,KAAK,CAAC,IAAI,CAAC,YAAY,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;IAC9E,KAAK,MAAM,OAAO,IAAI,MAAM,CAAC,QAAQ,EAAE,CAAC;QACtC,KAAK,CAAC,IAAI,CAAC,MAAM,OAAO,CAAC,QAAQ,CAAC,WAAW,EAAE,KAAK,OAAO,CAAC,IAAI,KAAK,OAAO,CAAC,OAAO,EAAE,CAAC,CAAA;IACzF,CAAC;IACD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;IACd,KAAK,CAAC,IAAI,CAAC,cAAc,CAAC,CAAA;IAC1B,KAAK,MAAM,QAAQ,IAAI,MAAM,CAAC,SAAS,EAAE,CAAC;QACxC,MAAM,MAAM,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,OAAO,CAAA;QACvD,KAAK,CAAC,IAAI,CAAC,MAAM,MAAM,KAAK,QAAQ,CAAC,QAAQ,EAAE,CAAC,CAAA;QAChD,KAAK,CAAC,IAAI,CAAC,aAAa,QAAQ,CAAC,MAAM,EAAE,CAAC,CAAA;IAC5C,CAAC;IACD,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;AACzB,CAAC;AAED,MAAM,UAAU,+BAA+B,CAAC,KAA2C;IACzF,MAAM,WAAW,GAAG,KAAK,CAAC,WAAW,IAAI,SAAS,CAAA;IAClD,MAAM,KAAK,GAAG,IAAI,GAAG,CAAiB;QACpC,CAAC,YAAY,EAAE,eAAe,CAAC,WAAW,CAAC,CAAC;QAC5C,CAAC,qBAAqB,EAAE,kBAAkB,CAAC,WAAW,CAAC,CAAC;KACzD,CAAC,CAAA;IACF,MAAM,OAAO,GAAa,EAAE,CAAA;IAC5B,MAAM,OAAO,GAAa,EAAE,CAAA;IAE5B,KAAK,MAAM,CAAC,YAAY,EAAE,OAAO,CAAC,IAAI,KAAK,EAAE,CAAC;QAC5C,MAAM,QAAQ,GAAG,IAAI,CAAC,KAAK,CAAC,UAAU,EAAE,YAAY,CAAC,CAAA;QACrD,IAAI,UAAU,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,EAAE,CAAC;YACzC,OAAO,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAA;YACtB,SAAQ;QACV,CAAC;QACD,SAAS,CAAC,OAAO,CAAC,QAAQ,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAA;QACjD,aAAa,CAAC,QAAQ,EAAE,OAAO,EAAE,OAAO,CAAC,CAAA;QACzC,OAAO,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAA;IACxB,CAAC;IAED,OAAO,EAAE,OAAO,EAAE,OAAO,EAAE,CAAA;AAC7B,CAAC;AAED,SAAS,aAAa,CAAC,UAAkB,EAAE,UAAoB;IAC7D,OAAO,UAAU,CAAC,GAAG,CAAC,SAAS,CAAC,EAAE,CAAC,IAAI,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC,CAAA;AAChG,CAAC;AAED,SAAS,iBAAiB,CAAC,OAAe;IACxC,MAAM,KAAK,GAAa,EAAE,CAAA;IAC1B,KAAK,MAAM,IAAI,IAAI,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC;QAC1C,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC,UAAU,CAAC,GAAG,CAAC;YAAE,SAAQ;QAC1C,IAAI,iBAAiB,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC;YAAE,SAAQ;QAC1E,MAAM,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAA;QACtE,IAAI,KAAK,CAAC,MAAM,IAAI,CAAC,IAAI,KAAK,CAAC,CAAC,CAAC,KAAK,KAAK;YAAE,KAAK,CAAC,IAAI,CAAC,KAAK,C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@@ -0,0 +1,92 @@
1
+ export type RepoChangeStatus = 'planned' | 'in-progress' | 'ready' | 'merged' | 'shipped';
2
+ export interface CrossRepoChange {
3
+ repoName: string;
4
+ branch: string;
5
+ files: string[];
6
+ commitShas: string[];
7
+ dependsOn: string[];
8
+ description: string;
9
+ status: RepoChangeStatus;
10
+ startedAt: string;
11
+ mergedAt?: string;
12
+ shippedAt?: string;
13
+ }
14
+ export interface CrossRepoBranch {
15
+ name: string;
16
+ repos: string[];
17
+ createdAt: string;
18
+ createdBy: string;
19
+ }
20
+ export interface CrossRepoMergePlan {
21
+ changes: CrossRepoChange[];
22
+ mergeOrder: string[];
23
+ testOrder: string[];
24
+ deployOrder: string[];
25
+ blockers: string[];
26
+ }
27
+ export interface CrossRepoMergeStep {
28
+ repoName: string;
29
+ action: 'merge' | 'test' | 'tag' | 'push' | 'deploy';
30
+ status: 'pending' | 'passed' | 'failed' | 'skipped';
31
+ duration: number;
32
+ error?: string;
33
+ evidence?: string;
34
+ }
35
+ export interface CrossRepoShipResult {
36
+ success: boolean;
37
+ steps: CrossRepoMergeStep[];
38
+ totalDuration: number;
39
+ warnings: string[];
40
+ }
41
+ export interface CrossRepoStatus {
42
+ topology: string;
43
+ managedBranches: CrossRepoBranch[];
44
+ activeChanges: CrossRepoChange[];
45
+ repoStates: Array<{
46
+ name: string;
47
+ path: string;
48
+ branch: string;
49
+ clean: boolean;
50
+ ahead: number;
51
+ behind: number;
52
+ }>;
53
+ recommendations: string[];
54
+ }
55
+ export interface CrossRepoOrchestratorInput {
56
+ projectDir?: string;
57
+ scaleDir?: string;
58
+ }
59
+ export declare class CrossRepoOrchestrator {
60
+ private projectDir;
61
+ private scaleRoot;
62
+ private stateDir;
63
+ private statePath;
64
+ private branches;
65
+ private changes;
66
+ private repositories;
67
+ constructor(input?: CrossRepoOrchestratorInput);
68
+ createCoordinatedBranch(branchName: string, repoNames: string[], options?: {
69
+ createdBy?: string;
70
+ fromBranch?: string;
71
+ }): CrossRepoBranch;
72
+ deleteCoordinatedBranch(branchName: string): void;
73
+ getManagedBranches(): CrossRepoBranch[];
74
+ registerChange(change: Omit<CrossRepoChange, 'status' | 'startedAt'>): CrossRepoChange;
75
+ updateChangeStatus(repoName: string, branch: string, status: RepoChangeStatus): void;
76
+ buildMergePlan(branchName: string): CrossRepoMergePlan;
77
+ shipCoordinated(branchName: string, options?: {
78
+ remote?: string;
79
+ baseBranch?: string;
80
+ dryRun?: boolean;
81
+ skipRepos?: string[];
82
+ }): Promise<CrossRepoShipResult>;
83
+ getCrossRepoStatus(): CrossRepoStatus;
84
+ private loadTopology;
85
+ private loadState;
86
+ private saveState;
87
+ private resolveMergeOrder;
88
+ private execGit;
89
+ private getRepoGitState;
90
+ private buildRecommendations;
91
+ }
92
+ export declare function summarizeCrossRepoStatus(status: CrossRepoStatus): string;