plan_executor 1.0.2 → 1.8.0

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Files changed (420) hide show
  1. checksums.yaml +4 -4
  2. data/.gitignore +1 -0
  3. data/.travis.yml +3 -2
  4. data/Gemfile +3 -6
  5. data/Gemfile.lock +52 -48
  6. data/README.md +2 -2
  7. data/fixtures/attachment/ccda_pdf.pdf +0 -0
  8. data/fixtures/attachment/ccda_pdf_base64.txt +2489 -0
  9. data/fixtures/attachment/ccda_structured.xml +1976 -0
  10. data/fixtures/attachment/ccda_unstructured.xml +2563 -0
  11. data/fixtures/daf/conformance-daf-query-responder.xml +2024 -193
  12. data/fixtures/diagnostic_report/diagnosticreport-familyhistory-create.xml +67 -0
  13. data/fixtures/diagnostic_report/diagnosticreport-hlatyping-create.xml +64 -0
  14. data/fixtures/diagnostic_report/diagnosticreport-pathologyreport-create.xml +312 -0
  15. data/fixtures/diagnostic_report/dr-100.xml +3 -3
  16. data/fixtures/diagnostic_report/dr-200.xml +5 -5
  17. data/fixtures/diagnostic_report/dr-300.xml +3 -3
  18. data/fixtures/diagnostic_report/dr-400.xml +3 -3
  19. data/fixtures/{diagnostic_order → diagnostic_request}/do-100.xml +57 -64
  20. data/fixtures/diagnostic_request/do-200.xml +73 -0
  21. data/fixtures/{diagnostic_order → diagnostic_request}/do-300.xml +73 -91
  22. data/{lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder → fixtures/diagnostic_request}/do-400.xml +74 -88
  23. data/fixtures/family_member_history/familymemberhistory-familyhistory-create.xml +27 -0
  24. data/fixtures/financial/claim-example-oral-average.xml +199 -0
  25. data/fixtures/financial/claim-example-oral-orthoplan.xml +298 -0
  26. data/fixtures/financial/claim-example.xml +98 -0
  27. data/fixtures/financial/eligibilityrequest-example.xml +40 -0
  28. data/fixtures/observation/obs-401.xml +7 -17
  29. data/fixtures/observation/obs-402.xml +7 -17
  30. data/fixtures/observation/obs-403.xml +4 -29
  31. data/fixtures/observation/obs-407.xml +4 -11
  32. data/fixtures/observation/observation-datawarehouse-create.xml +72 -0
  33. data/fixtures/observation/observation-familyhistory-create.xml +61 -0
  34. data/fixtures/observation/observation-germline-create.xml +72 -0
  35. data/fixtures/observation/observation-register-create.xml +72 -0
  36. data/fixtures/patch/medicationrequest-simple.xml +16 -0
  37. data/fixtures/patient/patient-example-updated.xml +1 -7
  38. data/fixtures/patient/patient-example-us-extensions.xml +119 -0
  39. data/fixtures/patient/patient-example.xml +46 -27
  40. data/fixtures/patient/patient-familyhistory-create.xml +45 -0
  41. data/fixtures/patient/patient-register-create.xml +47 -0
  42. data/fixtures/practitioner/practitioner-register-create.xml +32 -0
  43. data/fixtures/record/condition-example-f201-fever.xml +54 -49
  44. data/fixtures/record/condition-example-f205-infection.xml +16 -15
  45. data/fixtures/record/diagnosticreport-example-f201-brainct.xml +45 -18
  46. data/fixtures/record/encounter-example-f201-20130404.xml +42 -15
  47. data/fixtures/record/encounter-example-f202-20130128.xml +57 -15
  48. data/fixtures/record/observation-example-f202-temperature.xml +85 -60
  49. data/fixtures/record/organization-example-f201-aumc.xml +87 -4
  50. data/fixtures/record/organization-example-f203-bumc.xml +53 -4
  51. data/fixtures/record/patient-example-f201-roel.xml +108 -8
  52. data/fixtures/record/practitioner-example-f201-ab.xml +73 -14
  53. data/fixtures/record/procedure-example-f201-tpf.xml +39 -9
  54. data/fixtures/scheduling/slot-simple.xml +1 -1
  55. data/fixtures/sequence/sequence-register-create.xml +31 -0
  56. data/fixtures/specimen/spec-100.xml +8 -8
  57. data/fixtures/specimen/spec-400.xml +11 -11
  58. data/fixtures/specimen/spec-uslab-example1.xml +11 -11
  59. data/fixtures/specimen/specimen-familyhistory-create.xml +54 -0
  60. data/fixtures/specimen/specimen-register-create.xml +49 -0
  61. data/fixtures/terminology/codesystem-data-types.json +230 -0
  62. data/fixtures/terminology/codesystem-resource-types.json +482 -0
  63. data/fixtures/terminology/codesystem-simple.xml +129 -0
  64. data/fixtures/terminology/conceptmap-example.xml +141 -0
  65. data/fixtures/terminology/v2-codesystem.json +1297 -0
  66. data/fixtures/terminology/v2-valueset.json +16 -0
  67. data/fixtures/terminology/valueset-defined-types.json +25 -0
  68. data/fixtures/terminology/valueset-example.xml +111 -0
  69. data/fixtures/validation/observation.profile.xml +1534 -253
  70. data/fixtures/validation/observations/observation-example.xml +66 -0
  71. data/lib/FHIR_structure.json +129 -82
  72. data/lib/daf_resource_generator.rb +7 -7
  73. data/lib/data/resources.rb +50 -30
  74. data/lib/ext/client.rb +2 -2
  75. data/lib/plan_executor.rb +6 -1
  76. data/lib/resource_generator.rb +413 -212
  77. data/lib/tasks/tasks.rake +151 -20
  78. data/lib/tests/assertions.rb +24 -18
  79. data/lib/tests/base_test.rb +17 -3
  80. data/lib/tests/suites/argonaut_provider_connectathon_test.rb +234 -0
  81. data/lib/tests/suites/base_suite.rb +7 -3
  82. data/lib/tests/suites/connectathon_attachment_track_test.rb +124 -0
  83. data/lib/tests/suites/connectathon_audit_track.rb +113 -69
  84. data/lib/tests/suites/connectathon_care_plan_track.rb +237 -0
  85. data/lib/tests/suites/connectathon_fetch_patient_record.rb +40 -39
  86. data/lib/tests/suites/connectathon_financial_track.rb +231 -23
  87. data/lib/tests/suites/connectathon_genomics_track_test.rb +255 -0
  88. data/lib/tests/suites/connectathon_lab_order_track.rb +131 -104
  89. data/lib/tests/suites/connectathon_patch_track.rb +125 -0
  90. data/lib/tests/suites/connectathon_patient_track.rb +75 -68
  91. data/lib/tests/suites/connectathon_profile_validation.rb +9 -8
  92. data/lib/tests/suites/connectathon_scheduling_track.rb +127 -70
  93. data/lib/tests/suites/connectathon_terminology_track.rb +211 -34
  94. data/lib/tests/suites/daf_profiles_test.rb +112 -72
  95. data/lib/tests/suites/format_test.rb +113 -255
  96. data/lib/tests/suites/history_test.rb +72 -68
  97. data/lib/tests/suites/read_test.rb +31 -27
  98. data/lib/tests/suites/resource_test.rb +283 -85
  99. data/lib/tests/suites/search_test.rb +5 -3
  100. data/lib/tests/suites/search_test_robust.rb +8 -76
  101. data/lib/tests/suites/sprinkler_search_test.rb +104 -84
  102. data/lib/tests/suites/suite_engine.rb +17 -23
  103. data/lib/tests/suites/transaction_test.rb +117 -174
  104. data/lib/tests/testscripts/base_testscript.rb +425 -189
  105. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-base-client-id-json.xml +517 -0
  106. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-base-client-id-xml.xml +517 -0
  107. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-bonus-client-id-json.xml +648 -0
  108. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-bonus-client-id-xml.xml +648 -0
  109. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/README.html +68 -0
  110. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-base-server-id-json.xml +515 -0
  111. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-base-server-id-xml.xml +515 -0
  112. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-bonus-server-id-json.xml +645 -0
  113. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-bonus-server-id-xml.xml +642 -0
  114. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/capabilities/PatientCapabilityStatement.xml +43 -0
  115. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers-min.json +1 -3
  116. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers-min.xml +0 -0
  117. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers.json +5 -10
  118. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers.xml +5 -5
  119. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers-min.json +1 -3
  120. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers-min.xml +0 -0
  121. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers.json +5 -10
  122. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers.xml +4 -5
  123. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-PeterChalmers.json +96 -0
  124. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-PeterChalmers.xml +103 -0
  125. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-bonus-PeterChalmers.json +104 -0
  126. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-bonus-PeterChalmers.xml +108 -0
  127. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers-min.json +1 -3
  128. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers-min.xml +0 -0
  129. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers.json +6 -10
  130. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers.xml +6 -5
  131. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers-min.json +1 -3
  132. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers-min.xml +0 -0
  133. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers.json +7 -11
  134. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers.xml +5 -5
  135. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers-min.json +2 -4
  136. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers-min.xml +1 -1
  137. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers.json +7 -11
  138. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers.xml +8 -7
  139. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/01-RegisterPatient/connectathon-14-patient-fhirclient-01-register-client-id-xml.xml +306 -0
  140. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/01-RegisterPatient/connectathon-14-patient-fhirclient-01-register-server-id-xml.xml +317 -0
  141. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/02-PatientUpdate/connectathon-14-patient-fhirclient-02-update-client-id-xml.xml +346 -0
  142. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/02-PatientUpdate/connectathon-14-patient-fhirclient-02-update-server-id-xml.xml +385 -0
  143. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/capabilities/PatientCapabilityStatement.json +50 -0
  144. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient/_reference/conformance/PatientConformance.xml → scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/capabilities/PatientCapabilityStatement.xml} +10 -2
  145. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-client-id.json +21 -0
  146. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-client-id.xml +15 -0
  147. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-server-id.json +20 -0
  148. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-server-id.xml +14 -0
  149. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-client-id.json +21 -0
  150. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-client-id.xml +15 -0
  151. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-server-id.json +20 -0
  152. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-server-id.xml +14 -0
  153. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-client-id-json.xml +262 -0
  154. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-client-id-xml.xml +262 -0
  155. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-server-id-json.xml +273 -0
  156. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-server-id-xml.xml +273 -0
  157. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-client-id-json.xml +290 -0
  158. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-client-id-xml.xml +290 -0
  159. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-server-id-json.xml +326 -0
  160. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-server-id-xml.xml +326 -0
  161. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-client-id-json.xml +247 -0
  162. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-client-id-xml.xml +247 -0
  163. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-server-id-json.xml +282 -0
  164. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-server-id-xml.xml +281 -0
  165. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-client-id-json.xml +330 -0
  166. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-client-id-xml.xml +330 -0
  167. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-server-id-json.xml +366 -0
  168. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-server-id-xml.xml +366 -0
  169. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-client-id-json.xml +527 -0
  170. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-client-id-xml.xml +527 -0
  171. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-server-id-json.xml +519 -0
  172. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-server-id-xml.xml +519 -0
  173. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-client-id-json.xml +290 -0
  174. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-client-id-xml.xml +290 -0
  175. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-server-id-json.xml +288 -0
  176. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-server-id-xml.xml +288 -0
  177. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-client-id-json.xml +252 -0
  178. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-client-id-xml.xml +252 -0
  179. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-server-id-json.xml +284 -0
  180. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-server-id-xml.xml +284 -0
  181. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-client-id-json.xml +897 -0
  182. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-client-id-xml.xml +897 -0
  183. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-server-id-json.xml +963 -0
  184. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-server-id-xml.xml +963 -0
  185. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/capabilities/PatientCapabilityStatement.json +50 -0
  186. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/capabilities/PatientCapabilityStatement.xml +42 -0
  187. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-client-id.json +86 -0
  188. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-client-id.xml +62 -0
  189. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-server-id.json +85 -0
  190. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-server-id.xml +61 -0
  191. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-client-id.json +86 -0
  192. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-client-id.xml +62 -0
  193. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-server-id.json +86 -0
  194. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-server-id.xml +62 -0
  195. data/lib/tests/testscripts/scripts/spec/_reference/resources/patient-example-update.json +145 -0
  196. data/lib/tests/testscripts/scripts/spec/_reference/resources/patient-example.json +146 -0
  197. data/lib/tests/testscripts/scripts/spec/testscript-example-history.xml +191 -0
  198. data/lib/tests/testscripts/scripts/spec/testscript-example-multisystem.xml +190 -0
  199. data/lib/tests/testscripts/scripts/spec/testscript-example-readtest.xml +178 -0
  200. data/lib/tests/testscripts/scripts/spec/testscript-example-rule.xml +266 -0
  201. data/lib/tests/testscripts/scripts/spec/testscript-example-search.xml +177 -0
  202. data/lib/tests/testscripts/scripts/spec/testscript-example-update.xml +163 -0
  203. data/lib/tests/testscripts/scripts/spec/testscript-example.xml +228 -0
  204. data/lib/tests/testscripts/testscript_engine.rb +36 -22
  205. data/logs/.keep +0 -0
  206. data/plan_executor.gemspec +11 -3
  207. data/test/test_helper.rb +3 -3
  208. data/test/unit/fixtures_test.rb +24 -24
  209. data/test/unit/metadata_test.rb +19 -9
  210. data/test/unit/resource_generator_test.rb +20 -0
  211. metadata +244 -249
  212. data/fixtures/diagnostic_order/do-200.xml +0 -121
  213. data/fixtures/diagnostic_order/do-400.xml +0 -88
  214. data/fixtures/financial/claim-example-average.xml +0 -168
  215. data/fixtures/financial/claim-example-simple.xml +0 -67
  216. data/fixtures/order/order-100.xml +0 -61
  217. data/fixtures/order/order-200.xml +0 -61
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  398. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-400.xml +0 -70
  399. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-uslab-example1.xml +0 -82
  400. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 1 Document.txt +0 -122
  401. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 2 Document.txt +0 -103
  402. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 3 Document.txt +0 -201
  403. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 4 Document.txt +0 -310
  404. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/MedicationStatementCreate.xml +0 -11
  405. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/PatientSearchType.xml +0 -15
  406. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-create.json +0 -39
  407. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-patch.json +0 -3
  408. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json-if-match.xml +0 -321
  409. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json.xml +0 -303
  410. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-peer2peer-patient-json.xml +0 -235
  411. data/test/fixtures/testscript-example.xml +0 -202
  412. data/test/fixtures/testscript-history.xml +0 -143
  413. data/test/fixtures/testscript-readtest.xml +0 -272
  414. data/test/fixtures/testscript-search.xml +0 -282
  415. data/test/fixtures/testscript-update.xml +0 -147
  416. data/test/unit/argonaut_sprint6_test.rb +0 -31
  417. data/test/unit/argonaut_sprint7_test.rb +0 -21
  418. data/test/unit/basic_test.rb +0 -27
  419. data/test/unit/fetch_patient_record_test.rb +0 -357
  420. data/test/unit/financial_test.rb +0 -41
@@ -1,38 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <ValueSet xmlns="http://hl7.org/fhir">
3
- <identifier>
4
- <value value="http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"/>
5
- </identifier>
6
- <status value="draft"/>
7
- <experimental value="true"/>
8
- <expansion>
9
- <!-- must be less than 18 (arbitrary number: there must be some filtering), but the actual contents aren't tested -->
10
- <identifier />
11
- <timestamp />
12
- <contains>
13
- <system value="http://loinc.org"/>
14
- <code value="8486-3"/>
15
- <display value="Systolic blood pressure 1 hour mean"/>
16
- </contains>
17
- <contains>
18
- <system value="http://loinc.org"/>
19
- <code value="8487-1"/>
20
- <display value="Systolic blood pressure 8 hour mean"/>
21
- </contains>
22
- <contains>
23
- <system value="http://loinc.org"/>
24
- <code value="8488-9"/>
25
- <display value="Systolic blood pressure 10 hour mean"/>
26
- </contains>
27
- <contains>
28
- <system value="http://loinc.org"/>
29
- <code value="8489-7"/>
30
- <display value="Systolic blood pressure 12 hour mean"/>
31
- </contains>
32
- <contains>
33
- <system value="http://loinc.org"/>
34
- <code value="8490-5"/>
35
- <display value="Systolic blood pressure 24 hour mean"/>
36
- </contains>
37
- </expansion>
38
- </ValueSet>
@@ -1,252 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <ValueSet xmlns="http://hl7.org/fhir">
3
- <identifier>
4
- <value value="http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-3"/>
5
- </identifier>
6
- <status value="draft"/>
7
- <experimental value="true"/>
8
- <expansion>
9
- <identifier />
10
- <timestamp />
11
- <contains>
12
- <system value="http://snomed.info/sct"/>
13
- <code value="371037005"/>
14
- <display value="Systolic dysfunction"/>
15
- </contains>
16
- <contains>
17
- <system value="http://snomed.info/sct"/>
18
- <code value="56218007"/>
19
- <display value="Systolic hypertension"/>
20
- </contains>
21
- <contains>
22
- <system value="http://snomed.info/sct"/>
23
- <code value="271657009"/>
24
- <display value="Systolic cardiac thrill"/>
25
- </contains>
26
- <contains>
27
- <system value="http://snomed.info/sct"/>
28
- <code value="429457004"/>
29
- <display value="Systolic essential hypertension"/>
30
- </contains>
31
- <contains>
32
- <system value="http://snomed.info/sct"/>
33
- <code value="417996009"/>
34
- <display value="Systolic heart failure"/>
35
- </contains>
36
- <contains>
37
- <system value="http://snomed.info/sct"/>
38
- <code value="44623008"/>
39
- <display value="Systolic ejection sound"/>
40
- </contains>
41
- <contains>
42
- <system value="http://snomed.info/sct"/>
43
- <code value="248677002"/>
44
- <display value="Systolic flow murmur"/>
45
- </contains>
46
- <contains>
47
- <system value="http://snomed.info/sct"/>
48
- <code value="31574009"/>
49
- <display value="Systolic murmur"/>
50
- </contains>
51
- <contains>
52
- <system value="http://snomed.info/sct"/>
53
- <code value="120871000119108"/>
54
- <display value="Systolic heart failure stage B"/>
55
- </contains>
56
- <contains>
57
- <system value="http://snomed.info/sct"/>
58
- <code value="120851000119104"/>
59
- <display value="Systolic heart failure stage D"/>
60
- </contains>
61
- <contains>
62
- <system value="http://snomed.info/sct"/>
63
- <code value="120861000119102"/>
64
- <display value="Systolic heart failure stage C"/>
65
- </contains>
66
- <contains>
67
- <system value="http://snomed.info/sct"/>
68
- <code value="609556008"/>
69
- <display value="Systolic heart failure stage A"/>
70
- </contains>
71
- <contains>
72
- <system value="http://snomed.info/sct"/>
73
- <code value="61926008"/>
74
- <display value="Basal systolic thrill"/>
75
- </contains>
76
- <contains>
77
- <system value="http://snomed.info/sct"/>
78
- <code value="248672008"/>
79
- <display value="Soft systolic murmur"/>
80
- </contains>
81
- <contains>
82
- <system value="http://snomed.info/sct"/>
83
- <code value="65254001"/>
84
- <display value="Late systolic murmur"/>
85
- </contains>
86
- <contains>
87
- <system value="http://snomed.info/sct"/>
88
- <code value="89985004"/>
89
- <display value="Early systolic murmur"/>
90
- </contains>
91
- <contains>
92
- <system value="http://snomed.info/sct"/>
93
- <code value="248692001"/>
94
- <display value="Mid-systolic click"/>
95
- </contains>
96
- <contains>
97
- <system value="http://snomed.info/sct"/>
98
- <code value="248678007"/>
99
- <display value="Mitral late systolic murmur"/>
100
- </contains>
101
- <contains>
102
- <system value="http://snomed.info/sct"/>
103
- <code value="443254009"/>
104
- <display value="Acute systolic heart failure"/>
105
- </contains>
106
- <contains>
107
- <system value="http://snomed.info/sct"/>
108
- <code value="441481004"/>
109
- <display value="Chronic systolic heart failure"/>
110
- </contains>
111
- <contains>
112
- <system value="http://snomed.info/sct"/>
113
- <code value="48965007"/>
114
- <display value="Single non-ejection systolic click"/>
115
- </contains>
116
- <contains>
117
- <system value="http://snomed.info/sct"/>
118
- <code value="68519006"/>
119
- <display value="Multiple non-ejection systolic clicks"/>
120
- </contains>
121
- <contains>
122
- <system value="http://snomed.info/sct"/>
123
- <code value="134401001"/>
124
- <display value="Left ventricular systolic dysfunction"/>
125
- </contains>
126
- <contains>
127
- <system value="http://snomed.info/sct"/>
128
- <code value="416158002"/>
129
- <display value="Right ventricular systolic dysfunction"/>
130
- </contains>
131
- <contains>
132
- <system value="http://snomed.info/sct"/>
133
- <code value="68494000"/>
134
- <display value="Mid-systolic murmur"/>
135
- </contains>
136
- <contains>
137
- <system value="http://snomed.info/sct"/>
138
- <code value="442304009"/>
139
- <display value="Combined systolic and diastolic dysfunction"/>
140
- </contains>
141
- <contains>
142
- <system value="http://snomed.info/sct"/>
143
- <code value="18352002"/>
144
- <display value="Abnormal systolic arterial pressure"/>
145
- </contains>
146
- <contains>
147
- <system value="http://snomed.info/sct"/>
148
- <code value="407596008"/>
149
- <display value="Echocardiogram shows left ventricular systolic dysfunction"/>
150
- </contains>
151
- <contains>
152
- <system value="http://snomed.info/sct"/>
153
- <code value="371857005"/>
154
- <display value="Normal left ventricular systolic function and wall motion"/>
155
- </contains>
156
- <contains>
157
- <system value="http://snomed.info/sct"/>
158
- <code value="430396006"/>
159
- <display value="Chronic systolic dysfunction of left ventricle"/>
160
- </contains>
161
- <contains>
162
- <system value="http://snomed.info/sct"/>
163
- <code value="12929001"/>
164
- <display value="Normal systolic arterial pressure"/>
165
- </contains>
166
- <contains>
167
- <system value="http://snomed.info/sct"/>
168
- <code value="275285009"/>
169
- <display value="On examination - systolic murmur"/>
170
- </contains>
171
- <contains>
172
- <system value="http://snomed.info/sct"/>
173
- <code value="443253003"/>
174
- <display value="Acute on chronic systolic heart failure"/>
175
- </contains>
176
- <contains>
177
- <system value="http://snomed.info/sct"/>
178
- <code value="371862006"/>
179
- <display value="Depression of left ventricular systolic function"/>
180
- </contains>
181
- <contains>
182
- <system value="http://snomed.info/sct"/>
183
- <code value="81010002"/>
184
- <display value="Decreased systolic arterial pressure"/>
185
- </contains>
186
- <contains>
187
- <system value="http://snomed.info/sct"/>
188
- <code value="163030003"/>
189
- <display value="On examination - Systolic BP reading"/>
190
- </contains>
191
- <contains>
192
- <system value="http://snomed.info/sct"/>
193
- <code value="163069009"/>
194
- <display value="On examination - systolic cardiac thrill"/>
195
- </contains>
196
- <contains>
197
- <system value="http://snomed.info/sct"/>
198
- <code value="18050000"/>
199
- <display value="Increased systolic arterial pressure"/>
200
- </contains>
201
- <contains>
202
- <system value="http://snomed.info/sct"/>
203
- <code value="163094005"/>
204
- <display value="On examination - pulmonary systolic murmur"/>
205
- </contains>
206
- <contains>
207
- <system value="http://snomed.info/sct"/>
208
- <code value="426263006"/>
209
- <display value="Congestive heart failure due to left ventricular systolic dysfunction"/>
210
- </contains>
211
- <contains>
212
- <system value="http://snomed.info/sct"/>
213
- <code value="417081007"/>
214
- <display value="Systolic anterior movement of mitral valve"/>
215
- </contains>
216
- <contains>
217
- <system value="http://snomed.info/sct"/>
218
- <code value="248679004"/>
219
- <display value="Mitral pansystolic murmur"/>
220
- </contains>
221
- <contains>
222
- <system value="http://snomed.info/sct"/>
223
- <code value="248687003"/>
224
- <display value="Presystolic mitral murmur"/>
225
- </contains>
226
- <contains>
227
- <system value="http://snomed.info/sct"/>
228
- <code value="248688008"/>
229
- <display value="Presystolic tricuspid murmur"/>
230
- </contains>
231
- <contains>
232
- <system value="http://snomed.info/sct"/>
233
- <code value="71201008"/>
234
- <display value="Pansystolic murmur"/>
235
- </contains>
236
- <contains>
237
- <system value="http://snomed.info/sct"/>
238
- <code value="23795000"/>
239
- <display value="Presystolic murmur"/>
240
- </contains>
241
- <contains>
242
- <system value="http://snomed.info/sct"/>
243
- <code value="248680001"/>
244
- <display value="Tricuspid inspiratory pansystolic murmur"/>
245
- </contains>
246
- <contains>
247
- <system value="http://snomed.info/sct"/>
248
- <code value="248681002"/>
249
- <display value="Left parasternal pansystolic murmur"/>
250
- </contains>
251
- </expansion>
252
- </ValueSet>
@@ -1,58 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <ValueSet xmlns="http://hl7.org/fhir">
3
- <identifier>
4
- <value value="http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-3"/>
5
- </identifier>
6
- <status value="draft"/>
7
- <experimental value="true"/>
8
- <expansion>
9
- <!-- must be less than 25 (arbitrary number: there must be some filtering), but the actual contents aren't tested -->
10
- <identifier />
11
- <timestamp />
12
- <contains>
13
- <system value="http://snomed.info/sct"/>
14
- <code value="417996009"/>
15
- <display value="Systolic heart failure (disorder)"/>
16
- </contains>
17
- <contains>
18
- <system value="http://snomed.info/sct"/>
19
- <code value="120871000119108"/>
20
- <display value="Systolic heart failure stage B (disorder)"/>
21
- </contains>
22
- <contains>
23
- <system value="http://snomed.info/sct"/>
24
- <code value="120851000119104"/>
25
- <display value="Systolic heart failure stage D (disorder)"/>
26
- </contains>
27
- <contains>
28
- <system value="http://snomed.info/sct"/>
29
- <code value="120861000119102"/>
30
- <display value="Systolic heart failure stage C (disorder)"/>
31
- </contains>
32
- <contains>
33
- <system value="http://snomed.info/sct"/>
34
- <code value="609556008"/>
35
- <display value="Systolic heart failure stage A (finding)"/>
36
- </contains>
37
- <contains>
38
- <system value="http://snomed.info/sct"/>
39
- <code value="443254009"/>
40
- <display value="Acute systolic heart failure (disorder)"/>
41
- </contains>
42
- <contains>
43
- <system value="http://snomed.info/sct"/>
44
- <code value="441481004"/>
45
- <display value="Chronic systolic heart failure (disorder)"/>
46
- </contains>
47
- <contains>
48
- <system value="http://snomed.info/sct"/>
49
- <code value="443253003"/>
50
- <display value="Acute on chronic systolic heart failure (disorder)"/>
51
- </contains>
52
- <contains>
53
- <system value="http://snomed.info/sct"/>
54
- <code value="426263006"/>
55
- <display value="Congestive heart failure due to left ventricular systolic dysfunction (disorder)"/>
56
- </contains>
57
- </expansion>
58
- </ValueSet>
@@ -1,57 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <ValueSet xmlns="http://hl7.org/fhir">
3
- <identifier>
4
- <value value="http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-4"/>
5
- </identifier>
6
- <status value="draft"/>
7
- <experimental value="true"/>
8
- <expansion>
9
- <identifier />
10
- <timestamp />
11
- <contains>
12
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
13
- <code value="emergency"/>
14
- <display value="Emergency"/>
15
- </contains>
16
- <contains>
17
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
18
- <code value="family"/>
19
- <display value="Family"/>
20
- </contains>
21
- <contains>
22
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
23
- <code value="guardian"/>
24
- <display value="Guardian"/>
25
- </contains>
26
- <contains>
27
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
28
- <code value="friend"/>
29
- <display value="Friend"/>
30
- </contains>
31
- <contains>
32
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
33
- <code value="partner"/>
34
- <display value="Partner"/>
35
- </contains>
36
- <contains>
37
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
38
- <code value="work"/>
39
- <display value="Work"/>
40
- </contains>
41
- <contains>
42
- <system value="http://hl7.org/fhir/v3/RoleCode"/>
43
- <code value="CHILD"/>
44
- <display value="child"/>
45
- </contains>
46
- <contains>
47
- <system value="http://hl7.org/fhir/v3/RoleCode"/>
48
- <code value="FTH"/>
49
- <display value="father"/>
50
- </contains>
51
- <contains>
52
- <system value="http://hl7.org/fhir/v3/RoleCode"/>
53
- <code value="MTH"/>
54
- <display value="mother"/>
55
- </contains>
56
- </expansion>
57
- </ValueSet>
@@ -1,28 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <ValueSet xmlns="http://hl7.org/fhir">
3
- <identifier>
4
- <value value="http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-4"/>
5
- </identifier>
6
- <status value="draft"/>
7
- <experimental value="true"/>
8
- <expansion>
9
- <!-- must be less than 6 (arbitrary number: there must be some filtering), but the actual contents aren't tested -->
10
- <identifier />
11
- <timestamp />
12
- <contains>
13
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
14
- <code value="family"/>
15
- <display value="Family"/>
16
- </contains>
17
- <contains>
18
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
19
- <code value="friend"/>
20
- <display value="Friend"/>
21
- </contains>
22
- <contains>
23
- <system value="http://hl7.org/fhir/v3/RoleCode"/>
24
- <code value="FTH"/>
25
- <display value="father"/>
26
- </contains>
27
- </expansion>
28
- </ValueSet>
@@ -1,347 +0,0 @@
1
- <?xml version="1.0" encoding="UTF-8"?>
2
- <ValueSet xmlns="http://hl7.org/fhir">
3
- <identifier>
4
- <value value="http://www.healthintersections.com.au/fhir/ValueSet/intensional-case-1"/>
5
- </identifier>
6
- <status value="draft"/>
7
- <experimental value="true"/>
8
- <expansion>
9
- <identifier />
10
- <timestamp />
11
- <contains>
12
- <system value="http://loinc.org"/>
13
- <code value="11328-2"/>
14
- <display value="Heart rate at First encounter"/>
15
- </contains>
16
- <contains>
17
- <system value="http://loinc.org"/>
18
- <code value="11377-9"/>
19
- <display value="Diastolic blood pressure at First encounter"/>
20
- </contains>
21
- <contains>
22
- <system value="http://loinc.org"/>
23
- <code value="11378-7"/>
24
- <display value="Systolic blood pressure at First encounter"/>
25
- </contains>
26
- <contains>
27
- <system value="http://loinc.org"/>
28
- <code value="18708-8"/>
29
- <display value="First Heart rate Set"/>
30
- </contains>
31
- <contains>
32
- <system value="http://loinc.org"/>
33
- <code value="34538-9"/>
34
- <display value="Orthostatic blood pressure"/>
35
- </contains>
36
- <contains>
37
- <system value="http://loinc.org"/>
38
- <code value="34553-8"/>
39
- <display value="Orthostatic blood pressure panel"/>
40
- </contains>
41
- <contains>
42
- <system value="http://loinc.org"/>
43
- <code value="45372-0"/>
44
- <display value="Blood pressure systolic and diastolic--post phlebotomy"/>
45
- </contains>
46
- <contains>
47
- <system value="http://loinc.org"/>
48
- <code value="50402-7"/>
49
- <display value="Blood pressure systolic and diastolic--after transfusion"/>
50
- </contains>
51
- <contains>
52
- <system value="http://loinc.org"/>
53
- <code value="50403-5"/>
54
- <display value="Blood pressure systolic and diastolic--before transfusion"/>
55
- </contains>
56
- <contains>
57
- <system value="http://loinc.org"/>
58
- <code value="55284-4"/>
59
- <display value="Blood pressure systolic and diastolic"/>
60
- </contains>
61
- <contains>
62
- <system value="http://loinc.org"/>
63
- <code value="55422-0"/>
64
- <display value="Heart rate Encounter maximum"/>
65
- </contains>
66
- <contains>
67
- <system value="http://loinc.org"/>
68
- <code value="55425-3"/>
69
- <display value="Heart rate unspecified time mean by Pedometer"/>
70
- </contains>
71
- <contains>
72
- <system value="http://loinc.org"/>
73
- <code value="55426-1"/>
74
- <display value="Heart rate unspecified time maximum by Pedometer"/>
75
- </contains>
76
- <contains>
77
- <system value="http://loinc.org"/>
78
- <code value="68999-2"/>
79
- <display value="Heart rate --supine"/>
80
- </contains>
81
- <contains>
82
- <system value="http://loinc.org"/>
83
- <code value="69000-8"/>
84
- <display value="Heart rate --sitting"/>
85
- </contains>
86
- <contains>
87
- <system value="http://loinc.org"/>
88
- <code value="69001-6"/>
89
- <display value="Heart rate --standing"/>
90
- </contains>
91
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204
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214
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234
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260
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264
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- <display value="Systolic blood pressure 24 hour minimum"/>
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