plan_executor 1.0.2 → 1.8.0

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Files changed (420) hide show
  1. checksums.yaml +4 -4
  2. data/.gitignore +1 -0
  3. data/.travis.yml +3 -2
  4. data/Gemfile +3 -6
  5. data/Gemfile.lock +52 -48
  6. data/README.md +2 -2
  7. data/fixtures/attachment/ccda_pdf.pdf +0 -0
  8. data/fixtures/attachment/ccda_pdf_base64.txt +2489 -0
  9. data/fixtures/attachment/ccda_structured.xml +1976 -0
  10. data/fixtures/attachment/ccda_unstructured.xml +2563 -0
  11. data/fixtures/daf/conformance-daf-query-responder.xml +2024 -193
  12. data/fixtures/diagnostic_report/diagnosticreport-familyhistory-create.xml +67 -0
  13. data/fixtures/diagnostic_report/diagnosticreport-hlatyping-create.xml +64 -0
  14. data/fixtures/diagnostic_report/diagnosticreport-pathologyreport-create.xml +312 -0
  15. data/fixtures/diagnostic_report/dr-100.xml +3 -3
  16. data/fixtures/diagnostic_report/dr-200.xml +5 -5
  17. data/fixtures/diagnostic_report/dr-300.xml +3 -3
  18. data/fixtures/diagnostic_report/dr-400.xml +3 -3
  19. data/fixtures/{diagnostic_order → diagnostic_request}/do-100.xml +57 -64
  20. data/fixtures/diagnostic_request/do-200.xml +73 -0
  21. data/fixtures/{diagnostic_order → diagnostic_request}/do-300.xml +73 -91
  22. data/{lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder → fixtures/diagnostic_request}/do-400.xml +74 -88
  23. data/fixtures/family_member_history/familymemberhistory-familyhistory-create.xml +27 -0
  24. data/fixtures/financial/claim-example-oral-average.xml +199 -0
  25. data/fixtures/financial/claim-example-oral-orthoplan.xml +298 -0
  26. data/fixtures/financial/claim-example.xml +98 -0
  27. data/fixtures/financial/eligibilityrequest-example.xml +40 -0
  28. data/fixtures/observation/obs-401.xml +7 -17
  29. data/fixtures/observation/obs-402.xml +7 -17
  30. data/fixtures/observation/obs-403.xml +4 -29
  31. data/fixtures/observation/obs-407.xml +4 -11
  32. data/fixtures/observation/observation-datawarehouse-create.xml +72 -0
  33. data/fixtures/observation/observation-familyhistory-create.xml +61 -0
  34. data/fixtures/observation/observation-germline-create.xml +72 -0
  35. data/fixtures/observation/observation-register-create.xml +72 -0
  36. data/fixtures/patch/medicationrequest-simple.xml +16 -0
  37. data/fixtures/patient/patient-example-updated.xml +1 -7
  38. data/fixtures/patient/patient-example-us-extensions.xml +119 -0
  39. data/fixtures/patient/patient-example.xml +46 -27
  40. data/fixtures/patient/patient-familyhistory-create.xml +45 -0
  41. data/fixtures/patient/patient-register-create.xml +47 -0
  42. data/fixtures/practitioner/practitioner-register-create.xml +32 -0
  43. data/fixtures/record/condition-example-f201-fever.xml +54 -49
  44. data/fixtures/record/condition-example-f205-infection.xml +16 -15
  45. data/fixtures/record/diagnosticreport-example-f201-brainct.xml +45 -18
  46. data/fixtures/record/encounter-example-f201-20130404.xml +42 -15
  47. data/fixtures/record/encounter-example-f202-20130128.xml +57 -15
  48. data/fixtures/record/observation-example-f202-temperature.xml +85 -60
  49. data/fixtures/record/organization-example-f201-aumc.xml +87 -4
  50. data/fixtures/record/organization-example-f203-bumc.xml +53 -4
  51. data/fixtures/record/patient-example-f201-roel.xml +108 -8
  52. data/fixtures/record/practitioner-example-f201-ab.xml +73 -14
  53. data/fixtures/record/procedure-example-f201-tpf.xml +39 -9
  54. data/fixtures/scheduling/slot-simple.xml +1 -1
  55. data/fixtures/sequence/sequence-register-create.xml +31 -0
  56. data/fixtures/specimen/spec-100.xml +8 -8
  57. data/fixtures/specimen/spec-400.xml +11 -11
  58. data/fixtures/specimen/spec-uslab-example1.xml +11 -11
  59. data/fixtures/specimen/specimen-familyhistory-create.xml +54 -0
  60. data/fixtures/specimen/specimen-register-create.xml +49 -0
  61. data/fixtures/terminology/codesystem-data-types.json +230 -0
  62. data/fixtures/terminology/codesystem-resource-types.json +482 -0
  63. data/fixtures/terminology/codesystem-simple.xml +129 -0
  64. data/fixtures/terminology/conceptmap-example.xml +141 -0
  65. data/fixtures/terminology/v2-codesystem.json +1297 -0
  66. data/fixtures/terminology/v2-valueset.json +16 -0
  67. data/fixtures/terminology/valueset-defined-types.json +25 -0
  68. data/fixtures/terminology/valueset-example.xml +111 -0
  69. data/fixtures/validation/observation.profile.xml +1534 -253
  70. data/fixtures/validation/observations/observation-example.xml +66 -0
  71. data/lib/FHIR_structure.json +129 -82
  72. data/lib/daf_resource_generator.rb +7 -7
  73. data/lib/data/resources.rb +50 -30
  74. data/lib/ext/client.rb +2 -2
  75. data/lib/plan_executor.rb +6 -1
  76. data/lib/resource_generator.rb +413 -212
  77. data/lib/tasks/tasks.rake +151 -20
  78. data/lib/tests/assertions.rb +24 -18
  79. data/lib/tests/base_test.rb +17 -3
  80. data/lib/tests/suites/argonaut_provider_connectathon_test.rb +234 -0
  81. data/lib/tests/suites/base_suite.rb +7 -3
  82. data/lib/tests/suites/connectathon_attachment_track_test.rb +124 -0
  83. data/lib/tests/suites/connectathon_audit_track.rb +113 -69
  84. data/lib/tests/suites/connectathon_care_plan_track.rb +237 -0
  85. data/lib/tests/suites/connectathon_fetch_patient_record.rb +40 -39
  86. data/lib/tests/suites/connectathon_financial_track.rb +231 -23
  87. data/lib/tests/suites/connectathon_genomics_track_test.rb +255 -0
  88. data/lib/tests/suites/connectathon_lab_order_track.rb +131 -104
  89. data/lib/tests/suites/connectathon_patch_track.rb +125 -0
  90. data/lib/tests/suites/connectathon_patient_track.rb +75 -68
  91. data/lib/tests/suites/connectathon_profile_validation.rb +9 -8
  92. data/lib/tests/suites/connectathon_scheduling_track.rb +127 -70
  93. data/lib/tests/suites/connectathon_terminology_track.rb +211 -34
  94. data/lib/tests/suites/daf_profiles_test.rb +112 -72
  95. data/lib/tests/suites/format_test.rb +113 -255
  96. data/lib/tests/suites/history_test.rb +72 -68
  97. data/lib/tests/suites/read_test.rb +31 -27
  98. data/lib/tests/suites/resource_test.rb +283 -85
  99. data/lib/tests/suites/search_test.rb +5 -3
  100. data/lib/tests/suites/search_test_robust.rb +8 -76
  101. data/lib/tests/suites/sprinkler_search_test.rb +104 -84
  102. data/lib/tests/suites/suite_engine.rb +17 -23
  103. data/lib/tests/suites/transaction_test.rb +117 -174
  104. data/lib/tests/testscripts/base_testscript.rb +425 -189
  105. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-base-client-id-json.xml +517 -0
  106. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-base-client-id-xml.xml +517 -0
  107. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-bonus-client-id-json.xml +648 -0
  108. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-bonus-client-id-xml.xml +648 -0
  109. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/README.html +68 -0
  110. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-base-server-id-json.xml +515 -0
  111. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-base-server-id-xml.xml +515 -0
  112. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-bonus-server-id-json.xml +645 -0
  113. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-bonus-server-id-xml.xml +642 -0
  114. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/capabilities/PatientCapabilityStatement.xml +43 -0
  115. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers-min.json +1 -3
  116. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers-min.xml +0 -0
  117. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers.json +5 -10
  118. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers.xml +5 -5
  119. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers-min.json +1 -3
  120. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers-min.xml +0 -0
  121. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers.json +5 -10
  122. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers.xml +4 -5
  123. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-PeterChalmers.json +96 -0
  124. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-PeterChalmers.xml +103 -0
  125. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-bonus-PeterChalmers.json +104 -0
  126. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-bonus-PeterChalmers.xml +108 -0
  127. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers-min.json +1 -3
  128. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers-min.xml +0 -0
  129. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers.json +6 -10
  130. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers.xml +6 -5
  131. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers-min.json +1 -3
  132. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers-min.xml +0 -0
  133. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers.json +7 -11
  134. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers.xml +5 -5
  135. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers-min.json +2 -4
  136. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers-min.xml +1 -1
  137. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers.json +7 -11
  138. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers.xml +8 -7
  139. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/01-RegisterPatient/connectathon-14-patient-fhirclient-01-register-client-id-xml.xml +306 -0
  140. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/01-RegisterPatient/connectathon-14-patient-fhirclient-01-register-server-id-xml.xml +317 -0
  141. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/02-PatientUpdate/connectathon-14-patient-fhirclient-02-update-client-id-xml.xml +346 -0
  142. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/02-PatientUpdate/connectathon-14-patient-fhirclient-02-update-server-id-xml.xml +385 -0
  143. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/capabilities/PatientCapabilityStatement.json +50 -0
  144. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient/_reference/conformance/PatientConformance.xml → scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/capabilities/PatientCapabilityStatement.xml} +10 -2
  145. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-client-id.json +21 -0
  146. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-client-id.xml +15 -0
  147. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-server-id.json +20 -0
  148. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-server-id.xml +14 -0
  149. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-client-id.json +21 -0
  150. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-client-id.xml +15 -0
  151. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-server-id.json +20 -0
  152. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-server-id.xml +14 -0
  153. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-client-id-json.xml +262 -0
  154. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-client-id-xml.xml +262 -0
  155. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-server-id-json.xml +273 -0
  156. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-server-id-xml.xml +273 -0
  157. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-client-id-json.xml +290 -0
  158. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-client-id-xml.xml +290 -0
  159. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-server-id-json.xml +326 -0
  160. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-server-id-xml.xml +326 -0
  161. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-client-id-json.xml +247 -0
  162. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-client-id-xml.xml +247 -0
  163. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-server-id-json.xml +282 -0
  164. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-server-id-xml.xml +281 -0
  165. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-client-id-json.xml +330 -0
  166. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-client-id-xml.xml +330 -0
  167. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-server-id-json.xml +366 -0
  168. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-server-id-xml.xml +366 -0
  169. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-client-id-json.xml +527 -0
  170. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-client-id-xml.xml +527 -0
  171. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-server-id-json.xml +519 -0
  172. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-server-id-xml.xml +519 -0
  173. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-client-id-json.xml +290 -0
  174. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-client-id-xml.xml +290 -0
  175. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-server-id-json.xml +288 -0
  176. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-server-id-xml.xml +288 -0
  177. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-client-id-json.xml +252 -0
  178. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-client-id-xml.xml +252 -0
  179. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-server-id-json.xml +284 -0
  180. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-server-id-xml.xml +284 -0
  181. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-client-id-json.xml +897 -0
  182. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-client-id-xml.xml +897 -0
  183. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-server-id-json.xml +963 -0
  184. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-server-id-xml.xml +963 -0
  185. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/capabilities/PatientCapabilityStatement.json +50 -0
  186. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/capabilities/PatientCapabilityStatement.xml +42 -0
  187. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-client-id.json +86 -0
  188. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-client-id.xml +62 -0
  189. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-server-id.json +85 -0
  190. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-server-id.xml +61 -0
  191. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-client-id.json +86 -0
  192. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-client-id.xml +62 -0
  193. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-server-id.json +86 -0
  194. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-server-id.xml +62 -0
  195. data/lib/tests/testscripts/scripts/spec/_reference/resources/patient-example-update.json +145 -0
  196. data/lib/tests/testscripts/scripts/spec/_reference/resources/patient-example.json +146 -0
  197. data/lib/tests/testscripts/scripts/spec/testscript-example-history.xml +191 -0
  198. data/lib/tests/testscripts/scripts/spec/testscript-example-multisystem.xml +190 -0
  199. data/lib/tests/testscripts/scripts/spec/testscript-example-readtest.xml +178 -0
  200. data/lib/tests/testscripts/scripts/spec/testscript-example-rule.xml +266 -0
  201. data/lib/tests/testscripts/scripts/spec/testscript-example-search.xml +177 -0
  202. data/lib/tests/testscripts/scripts/spec/testscript-example-update.xml +163 -0
  203. data/lib/tests/testscripts/scripts/spec/testscript-example.xml +228 -0
  204. data/lib/tests/testscripts/testscript_engine.rb +36 -22
  205. data/logs/.keep +0 -0
  206. data/plan_executor.gemspec +11 -3
  207. data/test/test_helper.rb +3 -3
  208. data/test/unit/fixtures_test.rb +24 -24
  209. data/test/unit/metadata_test.rb +19 -9
  210. data/test/unit/resource_generator_test.rb +20 -0
  211. metadata +244 -249
  212. data/fixtures/diagnostic_order/do-200.xml +0 -121
  213. data/fixtures/diagnostic_order/do-400.xml +0 -88
  214. data/fixtures/financial/claim-example-average.xml +0 -168
  215. data/fixtures/financial/claim-example-simple.xml +0 -67
  216. data/fixtures/order/order-100.xml +0 -61
  217. data/fixtures/order/order-200.xml +0 -61
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  398. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-400.xml +0 -70
  399. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-uslab-example1.xml +0 -82
  400. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 1 Document.txt +0 -122
  401. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 2 Document.txt +0 -103
  402. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 3 Document.txt +0 -201
  403. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 4 Document.txt +0 -310
  404. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/MedicationStatementCreate.xml +0 -11
  405. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/PatientSearchType.xml +0 -15
  406. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-create.json +0 -39
  407. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-patch.json +0 -3
  408. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json-if-match.xml +0 -321
  409. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json.xml +0 -303
  410. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-peer2peer-patient-json.xml +0 -235
  411. data/test/fixtures/testscript-example.xml +0 -202
  412. data/test/fixtures/testscript-history.xml +0 -143
  413. data/test/fixtures/testscript-readtest.xml +0 -272
  414. data/test/fixtures/testscript-search.xml +0 -282
  415. data/test/fixtures/testscript-update.xml +0 -147
  416. data/test/unit/argonaut_sprint6_test.rb +0 -31
  417. data/test/unit/argonaut_sprint7_test.rb +0 -21
  418. data/test/unit/basic_test.rb +0 -27
  419. data/test/unit/fetch_patient_record_test.rb +0 -357
  420. data/test/unit/financial_test.rb +0 -41
@@ -0,0 +1,43 @@
1
+ <CapabilityStatement xmlns="http://hl7.org/fhir">
2
+ <status value="draft"/>
3
+ <date value="2016-12-06T09:48:00-05:00"/>
4
+ <description value="FHIR CapabilityStatement"/>
5
+ <kind value="capability"/>
6
+ <fhirVersion value="1.8.0"/>
7
+ <acceptUnknown value="both"/>
8
+ <format value="xml"/>
9
+ <format value="json"/>
10
+ <rest>
11
+ <mode value="server"/>
12
+ <resource>
13
+ <type value="Patient"/>
14
+ <interaction>
15
+ <code value="create"/>
16
+ </interaction>
17
+ <interaction>
18
+ <code value="read"/>
19
+ </interaction>
20
+ <interaction>
21
+ <code value="update"/>
22
+ </interaction>
23
+ <interaction>
24
+ <code value="delete"/>
25
+ </interaction>
26
+ <interaction>
27
+ <code value="history-instance"/>
28
+ </interaction>
29
+ <interaction>
30
+ <code value="search-type"/>
31
+ </interaction>
32
+ <updateCreate value="true"/>
33
+ <searchParam>
34
+ <name value="family"/>
35
+ <type value="string"/>
36
+ </searchParam>
37
+ <searchParam>
38
+ <name value="given"/>
39
+ <type value="string"/>
40
+ </searchParam>
41
+ </resource>
42
+ </rest>
43
+ </CapabilityStatement>
@@ -3,9 +3,7 @@
3
3
  "name": [
4
4
  {
5
5
  "use": "official",
6
- "family": [
7
- "Chalmers${C8}"
8
- ],
6
+ "family": "Chalmers${C8}",
9
7
  "given": [
10
8
  "Peter${C8}",
11
9
  "James${C8}"
@@ -2,7 +2,7 @@
2
2
  "resourceType": "Patient",
3
3
  "text": {
4
4
  "status": "generated",
5
- "div": "<div>\n <table>\n <tbody>\n <tr>\n <td>Name</td>\n <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>\n </tr>\n <tr>\n <td>Address</td>\n <td>534 Erewhon, Pleasantville, Vic, 3999</td>\n </tr>\n <tr>\n <td>Contacts</td>\n <td>Home: unknown. Work: (03) 5555 6473</td>\n </tr>\n <tr>\n <td>Id</td>\n <td>MR: 12345 (Acme Healthcare)</td>\n </tr>\n </tbody>\n </table> \n </div>"
5
+ "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n <table>\n <tbody>\n <tr>\n <td>Name</td>\n <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>\n </tr>\n <tr>\n <td>Address</td>\n <td>534 Erewhon, Pleasantville, Vic, 3999</td>\n </tr>\n <tr>\n <td>Contacts</td>\n <td>Home: unknown. Work: (03) 5555 6473</td>\n </tr>\n <tr>\n <td>Id</td>\n <td>MR: 12345 (Acme Healthcare)</td>\n </tr>\n </tbody>\n </table>\n </div>"
6
6
  },
7
7
  "identifier": [
8
8
  {
@@ -29,9 +29,7 @@
29
29
  "name": [
30
30
  {
31
31
  "use": "official",
32
- "family": [
33
- "Chalmers${C8}"
34
- ],
32
+ "family": "Chalmers${C8}",
35
33
  "given": [
36
34
  "Peter${C8}",
37
35
  "James${C8}"
@@ -74,17 +72,14 @@
74
72
  {
75
73
  "coding": [
76
74
  {
77
- "system": "http://hl7.org/fhir/patient-contact-relationship",
78
- "code": "partner"
75
+ "system": "http://hl7.org/fhir/v2/0131",
76
+ "code": "C"
79
77
  }
80
78
  ]
81
79
  }
82
80
  ],
83
81
  "name": {
84
- "family": [
85
- "du",
86
- "Marché"
87
- ],
82
+ "family": "du Marché",
88
83
  "given": [
89
84
  "Bénédicte"
90
85
  ]
@@ -1,4 +1,5 @@
1
- <?xml version="1.0" encoding="UTF-8"?><Patient xmlns="http://hl7.org/fhir">
1
+ <?xml version="1.0" encoding="UTF-8"?>
2
+ <Patient xmlns="http://hl7.org/fhir">
2
3
  <text>
3
4
  <status value="generated"/>
4
5
  <div xmlns="http://www.w3.org/1999/xhtml">
@@ -83,14 +84,13 @@
83
84
  <contact>
84
85
  <relationship>
85
86
  <coding>
86
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
87
- <code value="partner"/>
87
+ <system value="http://hl7.org/fhir/v2/0131"/>
88
+ <code value="C"/>
88
89
  </coding>
89
90
  </relationship>
90
91
 
91
92
  <name>
92
- <family value="du"/>
93
- <family value="Marché"/>
93
+ <family value="du Marché"/>
94
94
  <given value="Bénédicte"/>
95
95
  </name>
96
96
 
@@ -3,9 +3,7 @@
3
3
  "name": [
4
4
  {
5
5
  "use": "official",
6
- "family": [
7
- "Chalmers${C8}"
8
- ],
6
+ "family": "Chalmers${C8}",
9
7
  "given": [
10
8
  "Peter${C8}",
11
9
  "James${C8}"
@@ -2,7 +2,7 @@
2
2
  "resourceType": "Patient",
3
3
  "text": {
4
4
  "status": "generated",
5
- "div": "<div>\n <table>\n <tbody>\n <tr>\n <td>Name</td>\n <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>\n </tr>\n <tr>\n <td>Address</td>\n <td>534 Erewhon, Pleasantville, Vic, 3999</td>\n </tr>\n <tr>\n <td>Contacts</td>\n <td>Home: unknown. Work: (03) 5555 6473</td>\n </tr>\n <tr>\n <td>Id</td>\n <td>MR: 12345 (Acme Healthcare)</td>\n </tr>\n </tbody>\n </table> \n </div>"
5
+ "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n <table>\n <tbody>\n <tr>\n <td>Name</td>\n <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>\n </tr>\n <tr>\n <td>Address</td>\n <td>534 Erewhon, Pleasantville, Vic, 3999</td>\n </tr>\n <tr>\n <td>Contacts</td>\n <td>Home: unknown. Work: (03) 5555 6473</td>\n </tr>\n <tr>\n <td>Id</td>\n <td>MR: 12345 (Acme Healthcare)</td>\n </tr>\n </tbody>\n </table>\n </div>"
6
6
  },
7
7
  "identifier": [
8
8
  {
@@ -29,9 +29,7 @@
29
29
  "name": [
30
30
  {
31
31
  "use": "official",
32
- "family": [
33
- "Chalmers${C8}"
34
- ],
32
+ "family": "Chalmers${C8}",
35
33
  "given": [
36
34
  "Peter${C8}",
37
35
  "James${C8}"
@@ -82,17 +80,14 @@
82
80
  {
83
81
  "coding": [
84
82
  {
85
- "system": "http://hl7.org/fhir/patient-contact-relationship",
86
- "code": "partner"
83
+ "system": "http://hl7.org/fhir/v2/0131",
84
+ "code": "C"
87
85
  }
88
86
  ]
89
87
  }
90
88
  ],
91
89
  "name": {
92
- "family": [
93
- "du",
94
- "Marché"
95
- ],
90
+ "family": "du Marché",
96
91
  "given": [
97
92
  "Bénédicte"
98
93
  ]
@@ -88,15 +88,14 @@
88
88
  <contact>
89
89
  <relationship>
90
90
  <coding>
91
- <system value="http://hl7.org/fhir/patient-contact-relationship"/>
92
- <code value="partner"/>
91
+ <system value="http://hl7.org/fhir/v2/0131"/>
92
+ <code value="C"/>
93
93
  </coding>
94
94
  </relationship>
95
95
 
96
96
  <name>
97
- <family value="du"/>
98
- <family value="March�"/>
99
- <given value="B�n�dicte"/>
97
+ <family value="du Marché"/>
98
+ <given value="Bénédicte"/>
100
99
  </name>
101
100
 
102
101
  <telecom>
@@ -0,0 +1,96 @@
1
+ {
2
+ "resourceType": "Patient",
3
+ "id": "${CD16}",
4
+ "text": {
5
+ "status": "generated",
6
+ "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n <table>\n <tbody>\n <tr>\n <td>Name</td>\n <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>\n </tr>\n <tr>\n <td>Address</td>\n <td>534 Erewhon, Pleasantville, Vic, 3999</td>\n </tr>\n <tr>\n <td>Contacts</td>\n <td>Home: unknown. Work: (03) 5555 6473</td>\n </tr>\n <tr>\n <td>Id</td>\n <td>MR: 12345 (Acme Healthcare)</td>\n </tr>\n </tbody>\n </table>\n </div>"
7
+ },
8
+ "identifier": [
9
+ {
10
+ "use": "usual",
11
+ "type": {
12
+ "coding": [
13
+ {
14
+ "system": "http://hl7.org/fhir/v2/0203",
15
+ "code": "MR"
16
+ }
17
+ ]
18
+ },
19
+ "system": "urn:oid:1.2.36.146.595.217.0.1",
20
+ "value": "${CD16}",
21
+ "period": {
22
+ "start": "2001-05-06"
23
+ },
24
+ "assigner": {
25
+ "display": "Acme Healthcare"
26
+ }
27
+ }
28
+ ],
29
+ "active": true,
30
+ "name": [
31
+ {
32
+ "use": "official",
33
+ "family": "Chalmers${C8}",
34
+ "given": [
35
+ "Peter${C8}",
36
+ "James${C8}"
37
+ ]
38
+ },
39
+ {
40
+ "use": "usual",
41
+ "given": [
42
+ "Jim"
43
+ ]
44
+ }
45
+ ],
46
+ "telecom": [
47
+ {
48
+ "use": "home"
49
+ },
50
+ {
51
+ "system": "phone",
52
+ "value": "(03) 5555 6473",
53
+ "use": "work"
54
+ }
55
+ ],
56
+ "gender": "male",
57
+ "birthDate": "1974-12-25",
58
+ "deceasedBoolean": false,
59
+ "address": [
60
+ {
61
+ "use": "home",
62
+ "line": [
63
+ "534 Erewhon${C9} St"
64
+ ],
65
+ "city": "PleasantVille",
66
+ "state": "Vic",
67
+ "postalCode": "${D4}"
68
+ }
69
+ ],
70
+ "contact": [
71
+ {
72
+ "relationship": [
73
+ {
74
+ "coding": [
75
+ {
76
+ "system": "http://hl7.org/fhir/v2/0131",
77
+ "code": "C"
78
+ }
79
+ ]
80
+ }
81
+ ],
82
+ "name": {
83
+ "family": "du Marché",
84
+ "given": [
85
+ "Bénédicte"
86
+ ]
87
+ },
88
+ "telecom": [
89
+ {
90
+ "system": "phone",
91
+ "value": "+33 (237) 998327"
92
+ }
93
+ ]
94
+ }
95
+ ]
96
+ }
@@ -0,0 +1,103 @@
1
+ <?xml version="1.0" encoding="UTF-8"?>
2
+ <Patient xmlns="http://hl7.org/fhir">
3
+ <id value="${CD16}"/>
4
+ <text>
5
+ <status value="generated"/>
6
+ <div xmlns="http://www.w3.org/1999/xhtml">
7
+ <table>
8
+ <tbody>
9
+ <tr>
10
+ <td>Name</td>
11
+ <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>
12
+ </tr>
13
+ <tr>
14
+ <td>Address</td>
15
+ <td>534 Erewhon, Pleasantville, Vic, 3999</td>
16
+ </tr>
17
+ <tr>
18
+ <td>Contacts</td>
19
+ <td>Home: unknown. Work: (03) 5555 6473</td>
20
+ </tr>
21
+ <tr>
22
+ <td>Id</td>
23
+ <td>MR: 12345 (Acme Healthcare)</td>
24
+ </tr>
25
+ </tbody>
26
+ </table>
27
+ </div>
28
+ </text>
29
+ <!-- MR assigned by ACME healthcare on 6-May 2001 -->
30
+ <identifier>
31
+ <use value="usual"/>
32
+ <type>
33
+ <coding>
34
+ <system value="http://hl7.org/fhir/v2/0203"/>
35
+ <code value="MR"/>
36
+ </coding>
37
+ </type>
38
+ <system value="urn:oid:1.2.36.146.595.217.0.1"/>
39
+ <value value="${CD16}"/>
40
+ <period>
41
+ <start value="2001-05-06"/>
42
+ </period>
43
+ <assigner>
44
+ <display value="Acme Healthcare"/>
45
+ </assigner>
46
+ </identifier>
47
+
48
+ <active value="true"/>
49
+
50
+ <!-- Peter James Chalmers, but called "Jim" -->
51
+ <name>
52
+ <use value="official"/>
53
+ <family value="Chalmers${C8}"/>
54
+ <given value="Peter${C8}"/>
55
+ <given value="James${C8}"/>
56
+ </name>
57
+ <name>
58
+ <use value="usual"/>
59
+ <given value="Jim"/>
60
+ </name>
61
+
62
+ <telecom>
63
+ <use value="home"/>
64
+ <!-- home communication details aren't known -->
65
+ </telecom>
66
+ <telecom>
67
+ <system value="phone"/>
68
+ <value value="(03) 5555 6473"/>
69
+ <use value="work"/>
70
+ </telecom>
71
+
72
+ <!-- use FHIR code system for male / female -->
73
+ <gender value="male"/>
74
+ <birthDate value="1974-12-25"/>
75
+ <deceasedBoolean value="false"/>
76
+
77
+ <address>
78
+ <use value="home"/>
79
+ <line value="534 Erewhon${C9} St"/>
80
+ <city value="PleasantVille"/>
81
+ <state value="Vic"/>
82
+ <postalCode value="${D4}"/>
83
+ </address>
84
+
85
+ <contact>
86
+ <relationship>
87
+ <coding>
88
+ <system value="http://hl7.org/fhir/v2/0131"/>
89
+ <code value="C"/>
90
+ </coding>
91
+ </relationship>
92
+
93
+ <name>
94
+ <family value="du Marché"/>
95
+ <given value="Bénédicte"/>
96
+ </name>
97
+
98
+ <telecom>
99
+ <system value="phone"/>
100
+ <value value="+33 (237) 998327"/>
101
+ </telecom>
102
+ </contact>
103
+ </Patient>
@@ -0,0 +1,104 @@
1
+ {
2
+ "resourceType": "Patient",
3
+ "id": "${CD16}",
4
+ "text": {
5
+ "status": "generated",
6
+ "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n <table>\n <tbody>\n <tr>\n <td>Name</td>\n <td>Peter James <b>Chalmers</b> (&quot;Jim&quot;)</td>\n </tr>\n <tr>\n <td>Address</td>\n <td>534 Erewhon, Pleasantville, Vic, 3999</td>\n </tr>\n <tr>\n <td>Contacts</td>\n <td>Home: unknown. Work: (03) 5555 6473</td>\n </tr>\n <tr>\n <td>Id</td>\n <td>MR: 12345 (Acme Healthcare)</td>\n </tr>\n </tbody>\n </table>\n </div>"
7
+ },
8
+ "identifier": [
9
+ {
10
+ "use": "usual",
11
+ "type": {
12
+ "coding": [
13
+ {
14
+ "system": "http://hl7.org/fhir/v2/0203",
15
+ "code": "MR"
16
+ }
17
+ ]
18
+ },
19
+ "system": "urn:oid:1.2.36.146.595.217.0.1",
20
+ "value": "${CD16}",
21
+ "period": {
22
+ "start": "2001-05-06"
23
+ },
24
+ "assigner": {
25
+ "display": "Acme Healthcare"
26
+ }
27
+ }
28
+ ],
29
+ "active": true,
30
+ "name": [
31
+ {
32
+ "use": "official",
33
+ "family": "Chalmers${C8}",
34
+ "given": [
35
+ "Peter${C8}",
36
+ "James${C8}"
37
+ ]
38
+ },
39
+ {
40
+ "use": "usual",
41
+ "given": [
42
+ "Jim"
43
+ ]
44
+ }
45
+ ],
46
+ "telecom": [
47
+ {
48
+ "use": "home"
49
+ },
50
+ {
51
+ "system": "phone",
52
+ "value": "(03) 5555 6473",
53
+ "use": "work"
54
+ }
55
+ ],
56
+ "gender": "male",
57
+ "birthDate": "1974-12-25",
58
+ "_birthDate": {
59
+ "extension": [
60
+ {
61
+ "url": "http://hl7.org/fhir/StructureDefinition/patient-birthTime",
62
+ "valueDateTime": "1974-12-25T14:35:45Z"
63
+ }
64
+ ]
65
+ },
66
+ "deceasedBoolean": false,
67
+ "address": [
68
+ {
69
+ "use": "home",
70
+ "line": [
71
+ "534 Erewhon${C9} St"
72
+ ],
73
+ "city": "PleasantVille",
74
+ "state": "Vic",
75
+ "postalCode": "${D4}"
76
+ }
77
+ ],
78
+ "contact": [
79
+ {
80
+ "relationship": [
81
+ {
82
+ "coding": [
83
+ {
84
+ "system": "http://hl7.org/fhir/v2/0131",
85
+ "code": "C"
86
+ }
87
+ ]
88
+ }
89
+ ],
90
+ "name": {
91
+ "family": "du Marché",
92
+ "given": [
93
+ "Bénédicte"
94
+ ]
95
+ },
96
+ "telecom": [
97
+ {
98
+ "system": "phone",
99
+ "value": "+33 (237) 998327"
100
+ }
101
+ ]
102
+ }
103
+ ]
104
+ }