plan_executor 1.0.2 → 1.8.0

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Files changed (420) hide show
  1. checksums.yaml +4 -4
  2. data/.gitignore +1 -0
  3. data/.travis.yml +3 -2
  4. data/Gemfile +3 -6
  5. data/Gemfile.lock +52 -48
  6. data/README.md +2 -2
  7. data/fixtures/attachment/ccda_pdf.pdf +0 -0
  8. data/fixtures/attachment/ccda_pdf_base64.txt +2489 -0
  9. data/fixtures/attachment/ccda_structured.xml +1976 -0
  10. data/fixtures/attachment/ccda_unstructured.xml +2563 -0
  11. data/fixtures/daf/conformance-daf-query-responder.xml +2024 -193
  12. data/fixtures/diagnostic_report/diagnosticreport-familyhistory-create.xml +67 -0
  13. data/fixtures/diagnostic_report/diagnosticreport-hlatyping-create.xml +64 -0
  14. data/fixtures/diagnostic_report/diagnosticreport-pathologyreport-create.xml +312 -0
  15. data/fixtures/diagnostic_report/dr-100.xml +3 -3
  16. data/fixtures/diagnostic_report/dr-200.xml +5 -5
  17. data/fixtures/diagnostic_report/dr-300.xml +3 -3
  18. data/fixtures/diagnostic_report/dr-400.xml +3 -3
  19. data/fixtures/{diagnostic_order → diagnostic_request}/do-100.xml +57 -64
  20. data/fixtures/diagnostic_request/do-200.xml +73 -0
  21. data/fixtures/{diagnostic_order → diagnostic_request}/do-300.xml +73 -91
  22. data/{lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder → fixtures/diagnostic_request}/do-400.xml +74 -88
  23. data/fixtures/family_member_history/familymemberhistory-familyhistory-create.xml +27 -0
  24. data/fixtures/financial/claim-example-oral-average.xml +199 -0
  25. data/fixtures/financial/claim-example-oral-orthoplan.xml +298 -0
  26. data/fixtures/financial/claim-example.xml +98 -0
  27. data/fixtures/financial/eligibilityrequest-example.xml +40 -0
  28. data/fixtures/observation/obs-401.xml +7 -17
  29. data/fixtures/observation/obs-402.xml +7 -17
  30. data/fixtures/observation/obs-403.xml +4 -29
  31. data/fixtures/observation/obs-407.xml +4 -11
  32. data/fixtures/observation/observation-datawarehouse-create.xml +72 -0
  33. data/fixtures/observation/observation-familyhistory-create.xml +61 -0
  34. data/fixtures/observation/observation-germline-create.xml +72 -0
  35. data/fixtures/observation/observation-register-create.xml +72 -0
  36. data/fixtures/patch/medicationrequest-simple.xml +16 -0
  37. data/fixtures/patient/patient-example-updated.xml +1 -7
  38. data/fixtures/patient/patient-example-us-extensions.xml +119 -0
  39. data/fixtures/patient/patient-example.xml +46 -27
  40. data/fixtures/patient/patient-familyhistory-create.xml +45 -0
  41. data/fixtures/patient/patient-register-create.xml +47 -0
  42. data/fixtures/practitioner/practitioner-register-create.xml +32 -0
  43. data/fixtures/record/condition-example-f201-fever.xml +54 -49
  44. data/fixtures/record/condition-example-f205-infection.xml +16 -15
  45. data/fixtures/record/diagnosticreport-example-f201-brainct.xml +45 -18
  46. data/fixtures/record/encounter-example-f201-20130404.xml +42 -15
  47. data/fixtures/record/encounter-example-f202-20130128.xml +57 -15
  48. data/fixtures/record/observation-example-f202-temperature.xml +85 -60
  49. data/fixtures/record/organization-example-f201-aumc.xml +87 -4
  50. data/fixtures/record/organization-example-f203-bumc.xml +53 -4
  51. data/fixtures/record/patient-example-f201-roel.xml +108 -8
  52. data/fixtures/record/practitioner-example-f201-ab.xml +73 -14
  53. data/fixtures/record/procedure-example-f201-tpf.xml +39 -9
  54. data/fixtures/scheduling/slot-simple.xml +1 -1
  55. data/fixtures/sequence/sequence-register-create.xml +31 -0
  56. data/fixtures/specimen/spec-100.xml +8 -8
  57. data/fixtures/specimen/spec-400.xml +11 -11
  58. data/fixtures/specimen/spec-uslab-example1.xml +11 -11
  59. data/fixtures/specimen/specimen-familyhistory-create.xml +54 -0
  60. data/fixtures/specimen/specimen-register-create.xml +49 -0
  61. data/fixtures/terminology/codesystem-data-types.json +230 -0
  62. data/fixtures/terminology/codesystem-resource-types.json +482 -0
  63. data/fixtures/terminology/codesystem-simple.xml +129 -0
  64. data/fixtures/terminology/conceptmap-example.xml +141 -0
  65. data/fixtures/terminology/v2-codesystem.json +1297 -0
  66. data/fixtures/terminology/v2-valueset.json +16 -0
  67. data/fixtures/terminology/valueset-defined-types.json +25 -0
  68. data/fixtures/terminology/valueset-example.xml +111 -0
  69. data/fixtures/validation/observation.profile.xml +1534 -253
  70. data/fixtures/validation/observations/observation-example.xml +66 -0
  71. data/lib/FHIR_structure.json +129 -82
  72. data/lib/daf_resource_generator.rb +7 -7
  73. data/lib/data/resources.rb +50 -30
  74. data/lib/ext/client.rb +2 -2
  75. data/lib/plan_executor.rb +6 -1
  76. data/lib/resource_generator.rb +413 -212
  77. data/lib/tasks/tasks.rake +151 -20
  78. data/lib/tests/assertions.rb +24 -18
  79. data/lib/tests/base_test.rb +17 -3
  80. data/lib/tests/suites/argonaut_provider_connectathon_test.rb +234 -0
  81. data/lib/tests/suites/base_suite.rb +7 -3
  82. data/lib/tests/suites/connectathon_attachment_track_test.rb +124 -0
  83. data/lib/tests/suites/connectathon_audit_track.rb +113 -69
  84. data/lib/tests/suites/connectathon_care_plan_track.rb +237 -0
  85. data/lib/tests/suites/connectathon_fetch_patient_record.rb +40 -39
  86. data/lib/tests/suites/connectathon_financial_track.rb +231 -23
  87. data/lib/tests/suites/connectathon_genomics_track_test.rb +255 -0
  88. data/lib/tests/suites/connectathon_lab_order_track.rb +131 -104
  89. data/lib/tests/suites/connectathon_patch_track.rb +125 -0
  90. data/lib/tests/suites/connectathon_patient_track.rb +75 -68
  91. data/lib/tests/suites/connectathon_profile_validation.rb +9 -8
  92. data/lib/tests/suites/connectathon_scheduling_track.rb +127 -70
  93. data/lib/tests/suites/connectathon_terminology_track.rb +211 -34
  94. data/lib/tests/suites/daf_profiles_test.rb +112 -72
  95. data/lib/tests/suites/format_test.rb +113 -255
  96. data/lib/tests/suites/history_test.rb +72 -68
  97. data/lib/tests/suites/read_test.rb +31 -27
  98. data/lib/tests/suites/resource_test.rb +283 -85
  99. data/lib/tests/suites/search_test.rb +5 -3
  100. data/lib/tests/suites/search_test_robust.rb +8 -76
  101. data/lib/tests/suites/sprinkler_search_test.rb +104 -84
  102. data/lib/tests/suites/suite_engine.rb +17 -23
  103. data/lib/tests/suites/transaction_test.rb +117 -174
  104. data/lib/tests/testscripts/base_testscript.rb +425 -189
  105. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-base-client-id-json.xml +517 -0
  106. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-base-client-id-xml.xml +517 -0
  107. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-bonus-client-id-json.xml +648 -0
  108. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Client Assigned Id/connectathon-14-patient-bonus-client-id-xml.xml +648 -0
  109. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/README.html +68 -0
  110. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-base-server-id-json.xml +515 -0
  111. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-base-server-id-xml.xml +515 -0
  112. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-bonus-server-id-json.xml +645 -0
  113. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/Server Assigned Id/connectathon-14-patient-bonus-server-id-xml.xml +642 -0
  114. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/capabilities/PatientCapabilityStatement.xml +43 -0
  115. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers-min.json +1 -3
  116. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers-min.xml +0 -0
  117. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers.json +5 -10
  118. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-PeterChalmers.xml +5 -5
  119. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers-min.json +1 -3
  120. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers-min.xml +0 -0
  121. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers.json +5 -10
  122. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-create-bonus-PeterChalmers.xml +4 -5
  123. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-PeterChalmers.json +96 -0
  124. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-PeterChalmers.xml +103 -0
  125. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-bonus-PeterChalmers.json +104 -0
  126. data/lib/tests/testscripts/scripts/connectathon/Patient-01-Intro/_reference/resources/patient-create-client-id-bonus-PeterChalmers.xml +108 -0
  127. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers-min.json +1 -3
  128. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers-min.xml +0 -0
  129. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers.json +6 -10
  130. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-PeterChalmers.xml +6 -5
  131. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers-min.json +1 -3
  132. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers-min.xml +0 -0
  133. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers.json +7 -11
  134. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus1-PeterChalmers.xml +5 -5
  135. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers-min.json +2 -4
  136. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers-min.xml +1 -1
  137. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers.json +7 -11
  138. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient → scripts/connectathon/Patient-01-Intro}/_reference/resources/patient-update-bonus2-PeterChalmers.xml +8 -7
  139. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/01-RegisterPatient/connectathon-14-patient-fhirclient-01-register-client-id-xml.xml +306 -0
  140. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/01-RegisterPatient/connectathon-14-patient-fhirclient-01-register-server-id-xml.xml +317 -0
  141. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/02-PatientUpdate/connectathon-14-patient-fhirclient-02-update-client-id-xml.xml +346 -0
  142. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/02-PatientUpdate/connectathon-14-patient-fhirclient-02-update-server-id-xml.xml +385 -0
  143. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/capabilities/PatientCapabilityStatement.json +50 -0
  144. data/lib/tests/testscripts/{xml/Connectathon11/Track1-Patient/_reference/conformance/PatientConformance.xml → scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/capabilities/PatientCapabilityStatement.xml} +10 -2
  145. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-client-id.json +21 -0
  146. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-client-id.xml +15 -0
  147. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-server-id.json +20 -0
  148. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-create-server-id.xml +14 -0
  149. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-client-id.json +21 -0
  150. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-client-id.xml +15 -0
  151. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-server-id.json +20 -0
  152. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRClient/_reference/resources/patient-update-server-id.xml +14 -0
  153. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-client-id-json.xml +262 -0
  154. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-client-id-xml.xml +262 -0
  155. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-server-id-json.xml +273 -0
  156. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/01-RegisterPatient/connectathon-14-patient-fhirserver-01-register-server-id-xml.xml +273 -0
  157. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-client-id-json.xml +290 -0
  158. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-client-id-xml.xml +290 -0
  159. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-server-id-json.xml +326 -0
  160. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/02-PatientUpdate/connectathon-14-patient-fhirserver-02-update-server-id-xml.xml +326 -0
  161. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-client-id-json.xml +247 -0
  162. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-client-id-xml.xml +247 -0
  163. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-server-id-json.xml +282 -0
  164. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/03-PatientRead/connectathon-14-patient-fhirserver-03-read-server-id-xml.xml +281 -0
  165. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-client-id-json.xml +330 -0
  166. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-client-id-xml.xml +330 -0
  167. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-server-id-json.xml +366 -0
  168. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/04-PatientHistory/connectathon-14-patient-fhirserver-04-history-server-id-xml.xml +366 -0
  169. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-client-id-json.xml +527 -0
  170. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-client-id-xml.xml +527 -0
  171. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-server-id-json.xml +519 -0
  172. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/05-PatientVRead/connectathon-14-patient-fhirserver-05-vread-server-id-xml.xml +519 -0
  173. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-client-id-json.xml +290 -0
  174. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-client-id-xml.xml +290 -0
  175. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-server-id-json.xml +288 -0
  176. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/06-PatientSearching/connectathon-14-patient-fhirserver-06-search-server-id-xml.xml +288 -0
  177. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-client-id-json.xml +252 -0
  178. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-client-id-xml.xml +252 -0
  179. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-server-id-json.xml +284 -0
  180. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/07-PatientDeletion/connectathon-14-patient-fhirserver-07-delete-server-id-xml.xml +284 -0
  181. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-client-id-json.xml +897 -0
  182. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-client-id-xml.xml +897 -0
  183. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-server-id-json.xml +963 -0
  184. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/99-PatientAll/connectathon-14-patient-fhirserver-99-all-server-id-xml.xml +963 -0
  185. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/capabilities/PatientCapabilityStatement.json +50 -0
  186. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/capabilities/PatientCapabilityStatement.xml +42 -0
  187. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-client-id.json +86 -0
  188. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-client-id.xml +62 -0
  189. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-server-id.json +85 -0
  190. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-create-server-id.xml +61 -0
  191. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-client-id.json +86 -0
  192. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-client-id.xml +62 -0
  193. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-server-id.json +86 -0
  194. data/lib/tests/testscripts/scripts/connectathon/Patient-02-Formal/FHIRServer/_reference/resources/patient-update-server-id.xml +62 -0
  195. data/lib/tests/testscripts/scripts/spec/_reference/resources/patient-example-update.json +145 -0
  196. data/lib/tests/testscripts/scripts/spec/_reference/resources/patient-example.json +146 -0
  197. data/lib/tests/testscripts/scripts/spec/testscript-example-history.xml +191 -0
  198. data/lib/tests/testscripts/scripts/spec/testscript-example-multisystem.xml +190 -0
  199. data/lib/tests/testscripts/scripts/spec/testscript-example-readtest.xml +178 -0
  200. data/lib/tests/testscripts/scripts/spec/testscript-example-rule.xml +266 -0
  201. data/lib/tests/testscripts/scripts/spec/testscript-example-search.xml +177 -0
  202. data/lib/tests/testscripts/scripts/spec/testscript-example-update.xml +163 -0
  203. data/lib/tests/testscripts/scripts/spec/testscript-example.xml +228 -0
  204. data/lib/tests/testscripts/testscript_engine.rb +36 -22
  205. data/logs/.keep +0 -0
  206. data/plan_executor.gemspec +11 -3
  207. data/test/test_helper.rb +3 -3
  208. data/test/unit/fixtures_test.rb +24 -24
  209. data/test/unit/metadata_test.rb +19 -9
  210. data/test/unit/resource_generator_test.rb +20 -0
  211. metadata +244 -249
  212. data/fixtures/diagnostic_order/do-200.xml +0 -121
  213. data/fixtures/diagnostic_order/do-400.xml +0 -88
  214. data/fixtures/financial/claim-example-average.xml +0 -168
  215. data/fixtures/financial/claim-example-simple.xml +0 -67
  216. data/fixtures/order/order-100.xml +0 -61
  217. data/fixtures/order/order-200.xml +0 -61
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  398. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-400.xml +0 -70
  399. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-uslab-example1.xml +0 -82
  400. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 1 Document.txt +0 -122
  401. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 2 Document.txt +0 -103
  402. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 3 Document.txt +0 -201
  403. data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 4 Document.txt +0 -310
  404. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/MedicationStatementCreate.xml +0 -11
  405. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/PatientSearchType.xml +0 -15
  406. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-create.json +0 -39
  407. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-patch.json +0 -3
  408. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json-if-match.xml +0 -321
  409. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json.xml +0 -303
  410. data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-peer2peer-patient-json.xml +0 -235
  411. data/test/fixtures/testscript-example.xml +0 -202
  412. data/test/fixtures/testscript-history.xml +0 -143
  413. data/test/fixtures/testscript-readtest.xml +0 -272
  414. data/test/fixtures/testscript-search.xml +0 -282
  415. data/test/fixtures/testscript-update.xml +0 -147
  416. data/test/unit/argonaut_sprint6_test.rb +0 -31
  417. data/test/unit/argonaut_sprint7_test.rb +0 -21
  418. data/test/unit/basic_test.rb +0 -27
  419. data/test/unit/fetch_patient_record_test.rb +0 -357
  420. data/test/unit/financial_test.rb +0 -41
@@ -1,272 +0,0 @@
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-
2
- <TestScript xmlns="http://hl7.org/fhir">
3
- <id value="ReadTestScript"/>
4
- <url value="http://hl7.org/fhir/TestScript/ReadTestScript"/>
5
- <name value="ReadTestScript"/>
6
- <status value="draft"/>
7
- <description value="TestScript for Sprinkler tests (R001, R002, R003, R004) for testing basic READ requests."/>
8
- <contained>
9
- <Conformance xmlns="http://hl7.org/fhir">
10
- <id value="conf-overall"/>
11
- <date value="2012-01-04"/>
12
- <kind value="instance"/>
13
- <fhirVersion value="1.0.0"/>
14
- <acceptUnknown value="both"/>
15
- <format value="xml"/>
16
- <format value="json"/>
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- <rest>
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- <mode value="server"/>
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- <resource>
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- <type value="Patient"/>
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- <interaction>
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- <code value="read"/>
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- </interaction>
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- </resource>
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- </rest>
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- </Conformance>
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- <Conformance xmlns="http://hl7.org/fhir">
28
- <id value="conf-r001-validates"/>
29
- <date value="2012-01-04"/>
30
- <kind value="instance"/>
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- <fhirVersion value="1.0.0"/>
32
- <acceptUnknown value="both"/>
33
- <format value="xml"/>
34
- <rest>
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- <mode value="client"/>
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- <resource>
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- <type value="Patient"/>
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- <interaction>
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- <code value="read"/>
40
- </interaction>
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- </resource>
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- </rest>
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- </Conformance>
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- <Conformance xmlns="http://hl7.org/fhir">
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- <id value="conf-r001-requires"/>
46
- <date value="2012-01-04"/>
47
- <kind value="instance"/>
48
- <fhirVersion value="1.0.0"/>
49
- <acceptUnknown value="both"/>
50
- <format value="xml"/>
51
- <rest>
52
- <mode value="client"/>
53
- <resource>
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- <type value="Patient"/>
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- <interaction>
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- <code value="read"/>
57
- </interaction>
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- <interaction>
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- <code value="create"/>
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- </interaction>
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- <interaction>
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- <code value="delete"/>
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- </interaction>
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- </resource>
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- </rest>
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- </Conformance>
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- <Patient xmlns="http://hl7.org/fhir">
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- <id value="patient1"/>
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- </Patient>
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- </contained>
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- <metadata>
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- <capability>
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- <required value="true"/>
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- <validated value="true"/>
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- <description value="Patient Create, Read and Delete Operations"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#create"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#delete"/>
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- <conformance>
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- <reference value="#conf-overall"/>
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- </conformance>
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- </capability>
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- </metadata>
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- <fixture id="F1">
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- <resource>
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- <reference value="#patient1"/>
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- <display value="Patient resource"/>
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- </resource>
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- </fixture>
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- <setup>
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- <action>
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- <operation>
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- <type>
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- <code value="create"/>
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- </type>
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- <sourceId value="F1"/>
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- </operation>
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- </action>
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- <action>
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- <assert>
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- <response value="created"/>
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- </assert>
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- </action>
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- </setup>
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- <test id="R001">
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- <name value="Get Test Data Person"/>
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- <description value="Result headers on normal read."/>
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- <metadata>
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- <capability>
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- <validated value="true"/>
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- <description value="Patient Read Operations"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
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- <conformance>
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- <reference value="#conf-r001-validates"/>
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- </conformance>
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- </capability>
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- <capability>
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- <required value="true"/>
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- <description value="Patient Read, Update, and Delete Operations"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#create"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#delete"/>
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- <conformance>
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- <reference value="#conf-r001-requires"/>
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- </conformance>
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- </capability>
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- </metadata>
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- <action>
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- <operation>
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- <type>
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- <code value="read"/>
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- </type>
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- <accept value="xml"/>
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- <targetId value="F1"/>
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- </operation>
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- </action>
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- <action>
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- <assert>
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- <response value="okay"/>
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- </assert>
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- </action>
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- <action>
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- <assert>
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- <contentType value="xml"/>
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- </assert>
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- </action>
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- <action>
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- <assert>
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- <contentType value="json"/>
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- <warningOnly value="true"/> <!-- an example of a warning -->
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- </assert>
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- </action>
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- <action>
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- <assert>
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- <headerField value="Last-Modified"/>
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- <operator value="notEmpty"/>
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- </assert>
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- </action>
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- </test>
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- <test id="R002">
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- <name value="Try Read Unknown Resource Type"/>
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- <description value="Read unknown resource type"/>
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- <metadata>
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- <capability>
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- <required value="true"/>
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- <validated value="true"/>
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- <description value="Patient Read, Update, and Delete Operations"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#create"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#delete"/>
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- <conformance>
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- <reference value="#conf-r001-validates"/>
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- </conformance>
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- </capability>
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- </metadata>
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- <action>
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- <operation>
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- <type>
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- <code value="read"/>
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- </type>
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- <!-- What we really want here is an illegal type, but the validation in the build process
182
- won't that.
183
- But Parameters is a valid resource which doesn't have an end-point so should
184
- fail. -->
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- <resource value="Parameters"/>
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- <params value="/1"/>
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- </operation>
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- </action>
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- <action>
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- <assert>
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- <response value="notFound"/>
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- </assert>
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- </action>
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- <action>
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- <assert>
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- <responseCode value="404"/>
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- </assert>
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- </action>
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- </test>
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- <test id="R003">
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- <name value="Try Read Non Existing Resource"/>
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- <description value="Read non-existing resource id"/>
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- <metadata>
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- <capability>
205
- <required value="true"/>
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- <validated value="true"/>
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- <description value="Patient Read, Update, and Delete Operations"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#create"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#delete"/>
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- <conformance>
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- <reference value="#conf-r001-validates"/>
213
- </conformance>
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- </capability>
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- </metadata>
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- <action>
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- <operation>
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- <type>
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- <code value="read"/>
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- </type>
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- <resource value="Patient"/>
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- <params value="/3141592unlikely"/>
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- </operation>
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- </action>
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- <action>
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- <assert>
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- <response value="notFound"/>
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- </assert>
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- </action>
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- </test>
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- <test id="R004">
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- <name value="Try Read Bad Formatted Resource Id"/>
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- <description value="Read bad formatted resource id"/>
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- <metadata>
235
- <capability>
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- <required value="true"/>
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- <validated value="true"/>
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- <description value="Patient Read, Update, and Delete Operations"/>
239
- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#create"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#delete"/>
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- <conformance>
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- <reference value="#conf-r001-validates"/>
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- </conformance>
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- </capability>
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- </metadata>
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- <action>
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- <operation>
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- <type>
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- <code value="read"/>
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- </type>
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- <resource value="Patient"/>
253
- <params value="/Invalid-ID-Because_Of_!@$Special_Characters_and_Length_Over_Sixty_Four_Characters"/>
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- </operation>
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- </action>
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- <action>
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- <assert>
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- <response value="bad"/>
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- </assert>
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- </action>
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- </test>
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- <teardown>
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- <action>
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- <operation>
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- <type>
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- <code value="delete"/>
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- </type>
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- <targetId value="F1"/>
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- </operation>
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- </action>
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- </teardown>
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- </TestScript>
@@ -1,282 +0,0 @@
1
- <TestScript xmlns="http://hl7.org/fhir">
2
- <id value="SearchTestScript"/>
3
- <url value="http://hl7.org/fhir/TestScript/search"/>
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- <name value="Read, Search and Conditional Create and Delete"/>
5
- <status value="draft"/>
6
- <description value="Test Script for testing search, read, and conditional create and delete"/>
7
- <contained>
8
- <Conformance xmlns="http://hl7.org/fhir">
9
- <id value="conf1"/>
10
- <date value="2012-01-04"/>
11
- <kind value="instance"/>
12
- <fhirVersion value="1.0.0"/>
13
- <acceptUnknown value="both"/>
14
- <format value="xml"/>
15
- <format value="json"/>
16
- <rest>
17
- <mode value="server"/>
18
- <resource>
19
- <type value="Patient"/>
20
- <interaction>
21
- <code value="read"/>
22
- </interaction>
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- </resource>
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- </rest>
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- </Conformance>
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- <Patient xmlns="http://hl7.org/fhir">
27
- <id value="patient1"/>
28
- <name>
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- <use value="official"/>
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- <family value="Doe"/>
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- <given value="John"/>
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- </name>
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- <birthDate value="1974-12-31" />
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- </Patient>
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- </contained>
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- <metadata>
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- <capability>
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- <required value="true"/>
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- <description value="Patient Create and Read Operations"/>
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- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#create"/>
41
- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#read"/>
42
- <conformance>
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- <reference value="#conf1"/>
44
- </conformance>
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- </capability>
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- <capability>
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- <required value="true"/>
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- <description value="Patient Conditional Delete Operation"/>
49
- <link value="http://hl7-fhir.github.io/http.html#2.1.0.12.1"/>
50
- <conformance>
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- <reference value="#conf1"/>
52
- </conformance>
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- </capability>
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- <capability>
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- <required value="true"/>
56
- <description value="Patient Conditional Create Operation"/>
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- <link value="http://hl7-fhir.github.io/http.html#2.1.0.13.1"/>
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- <conformance>
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- <reference value="#conf1"/>
60
- </conformance>
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- </capability>
62
- </metadata>
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- <fixture id="example-patient">
64
- <resource>
65
- <reference value="#patient1"/>
66
- </resource>
67
- </fixture>
68
- <variable>
69
- <name value="V1"/>
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- <headerField value="Location"/>
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- <sourceId value="R1"/>
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- </variable>
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- <variable>
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- <name value="V2"/>
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- <path value="fhir:Bundle/fhir:entry/fhir:resource/fhir:Patient/fhir:id/@value"/>
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- <sourceId value="R3"/>
77
- </variable>
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- <setup>
79
- <!-- TODO: Conditional Delete -->
80
- <!-- Conditional Delete -->
81
- <action>
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- <operation>
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- <type>
84
- <code value="delete"/>
85
- </type>
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- <resource value="Patient"/>
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- <params value="given=John&amp;family=Doe"/>
88
- </operation>
89
- </action>
90
- </setup>
91
- <test id="Test1">
92
- <name value="Create"/>
93
- <description value="Create, read, search, conditional create, conditional delete."/>
94
- <metadata>
95
- <link>
96
- <url value="http://hl7.org/implement/standards/FHIR-Develop/patient.html"/>
97
- <description value="FHIR Patient"/>
98
- </link>
99
- <capability>
100
- <validated value="true"/>
101
- <description value="Patient Search Operation"/>
102
- <link value="http://hl7.org/implement/standards/FHIR-Develop/http.html#search"/>
103
- <conformance>
104
- <reference value="#conf1"/>
105
- </conformance>
106
- </capability>
107
- </metadata>
108
- <!-- Create the patient using fixture -->
109
- <action>
110
- <operation>
111
- <type>
112
- <code value="create"/>
113
- </type>
114
- <sourceId value="example-patient"/>
115
- </operation>
116
- </action>
117
- <action>
118
- <assert>
119
- <responseCode value="201"/>
120
- </assert>
121
- </action>
122
- <!-- Patient search by name. Save the responseBody in 'F1' fixture.
123
- Save the responseHeader in H1 -->
124
- <action>
125
- <operation>
126
- <type>
127
- <code value="search"/>
128
- </type>
129
- <resource value="Patient"/>
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- <contentType value="json"/>
131
- <params value="?given=John&amp;family=Doe"/>
132
- <responseId value="R1"/>
133
- </operation>
134
- </action>
135
- <!-- Verify that the Location in response-header is valid -->
136
- <!-- TODO: Should this be content-location? -->
137
- <action>
138
- <assert>
139
- <headerField value="Location"/>
140
- <operator value="notEmpty"/>
141
- <warningOnly value="true"/>
142
- </assert>
143
- </action>
144
- <!-- Verify that the birthdate got persisted and is being returned properly -->
145
- <action>
146
- <assert>
147
- <operator value="equals"/>
148
- <path value="fhir:Bundle/fhir:entry/fhir:resource/fhir:Patient/fhir:birthDate/@value"/>
149
- <sourceId value="R1"/>
150
- <value value="1974-12-31"/>
151
- <warningOnly value="true"/>
152
- </assert>
153
- </action>
154
- <!-- Verify that the navigation links are valid -->
155
- <action>
156
- <assert>
157
- <navigationLinks value="true"/>
158
- <warningOnly value="true"/>
159
- </assert>
160
- </action>
161
-
162
- <!-- Use the Location returned earlier to grab the resource
163
- to verify that Location was pointing to correct resource. -->
164
- <!-- TODO: be able to pass in a direct url to client -->
165
- <!-- <action> -->
166
- <!-- <operation> -->
167
- <!-- <type> -->
168
- <!-- <code value="search"/> -->
169
- <!-- </type> -->
170
- <!-- <accept value="json"/> -->
171
- <!-- <responseId value="R2"/> -->
172
- <!-- <url value="${V1}"/> -->
173
- <!-- </operation> -->
174
- <!-- </action> -->
175
- <!-- <action> -->
176
- <!-- <assert> -->
177
- <!-- <contentType value="json"/> -->
178
- <!-- </assert> -->
179
- <!-- </action> -->
180
- <!-- <action> -->
181
- <!-- <assert> -->
182
- <!-- <response value="okay"/> -->
183
- <!-- </assert> -->
184
- <!-- </action> -->
185
-
186
- <!-- Search for the resource but this time using the birthdate
187
- as a search parameter to make sure search by birthDate works -->
188
- <action>
189
- <operation>
190
- <type>
191
- <code value="search"/>
192
- </type>
193
- <resource value="Patient"/>
194
- <accept value="json"/>
195
- <params value="?given=John&amp;family=Doe&amp;birthdate=1974-12-31"/>
196
- <responseId value="R3"/>
197
- </operation>
198
- </action>
199
- <action>
200
- <assert>
201
- <contentType value="json"/>
202
- </assert>
203
- </action>
204
- <action>
205
- <assert>
206
- <response value="okay"/>
207
- </assert>
208
- </action>
209
-
210
- <!-- Verify that the birthDate matches expectations -->
211
- <!-- TODO: THIS RELIES ON THE R2 RESPONSE, which I have commented out until direct url grabs possible -->
212
- <!-- <action> -->
213
- <!-- <assert> -->
214
- <!-- <compareToSourceId value="R2"/> -->
215
- <!-- <compareToSourcePath value="fhir:Patient/fhir:birthDate/@value"/> -->
216
- <!-- <path value="fhir:Patient/fhir:birthDate/@value"/> -->
217
- <!-- <sourceId value="R3"/> -->
218
- <!-- </assert> -->
219
- <!-- </action> -->
220
- <!-- <!&#45;&#45; Verify that the name matches expectations &#45;&#45;> -->
221
- <!-- <action> -->
222
- <!-- <assert> -->
223
- <!-- <path value="fhir:Patient/fhir:name/fhir:given/@value"/> -->
224
- <!-- <sourceId value="R3"/> -->
225
- <!-- <value value="John"/> -->
226
- <!-- </assert> -->
227
- <!-- </action> -->
228
-
229
-
230
- <!-- TODO: Conditional Create -->
231
- <!-- <!&#45;&#45; Conditional Create &#45;&#45;> -->
232
- <!-- <action> -->
233
- <!-- <operation> -->
234
- <!-- <type> -->
235
- <!-- <code value="create"/> -->
236
- <!-- </type> -->
237
- <!-- <requestHeader> -->
238
- <!-- <field value="If&#45;None&#45;Exist"/> -->
239
- <!-- <value value="Patient?given=John&#38;amp;Doe&#38;amp;birthdate=1974&#45;12&#45;31"/> -->
240
- <!-- </requestHeader> -->
241
- <!-- <sourceId value="F1"/> -->
242
- <!-- </operation> -->
243
- <!-- </action> -->
244
- <!-- <!&#45;&#45; The response code of 200 verifies that the resource -->
245
- <!-- already exists and did not get created &#45;&#45;> -->
246
- <!-- <action> -->
247
- <!-- <assert> -->
248
- <!-- <responseCode value="200"/> -->
249
- <!-- </assert> -->
250
- <!-- </action> -->
251
- <!-- -->
252
-
253
- <!-- TODO: Conditional Delete -->
254
- <!-- <!&#45;&#45; Conditional Delete &#45;&#45;> -->
255
- <!-- <action> -->
256
- <!-- <operation> -->
257
- <!-- <type> -->
258
- <!-- <code value="delete"/> -->
259
- <!-- </type> -->
260
- <!-- <resource value="Patient"/> -->
261
- <!-- <params value="?given=John&#38;amp;family=Doe&#38;amp;birthdate=1974&#45;12&#45;31"/> -->
262
- <!-- </operation> -->
263
- <!-- </action> -->
264
-
265
- <!-- Search again and make sure the patient has been deleted.
266
- This time perform read by id using variable -->
267
- <action>
268
- <operation>
269
- <type>
270
- <code value="read"/>
271
- </type>
272
- <resource value="Patient"/>
273
- <params value="/${V2}"/>
274
- </operation>
275
- </action>
276
- <action>
277
- <assert>
278
- <responseCode value="410"/>
279
- </assert>
280
- </action>
281
- </test>
282
- </TestScript>