solarwindpy 0.0.1.dev0__py3-none-any.whl → 0.1.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of solarwindpy might be problematic. Click here for more details.

Files changed (412) hide show
  1. plans/.velocity/metrics.json +96 -0
  2. plans/0-overview-template.md +268 -0
  3. plans/N-phase-template.md +106 -0
  4. plans/PLAN_AUDIT_SUMMARY.md +173 -0
  5. plans/TEMPLATE-USAGE-GUIDE.md +198 -0
  6. plans/__init__.py +1 -0
  7. plans/abandoned/compaction-agent-system/0-Overview.md +123 -0
  8. plans/abandoned/compaction-agent-system/agents-index-update-plan.md +109 -0
  9. plans/abandoned/compaction-agent-system/compacted_state.md +85 -0
  10. plans/abandoned/compaction-agent-system/implementation-plan.md +107 -0
  11. plans/abandoned/compaction-agent-system/system-validation-report.md +159 -0
  12. plans/abandoned/compaction-agent-system/usage-guide.md +210 -0
  13. plans/abandoned/hook-system-enhancement/0-Overview.md +214 -0
  14. plans/abandoned/hook-system-enhancement/1-Phase1-Core-Infrastructure.md +313 -0
  15. plans/abandoned/hook-system-enhancement/2-Phase2-Intelligent-Testing.md +385 -0
  16. plans/abandoned/hook-system-enhancement/3-Phase3-Physics-Validation.md +444 -0
  17. plans/abandoned/hook-system-enhancement/4-Phase4-Performance-Monitoring.md +458 -0
  18. plans/abandoned/hook-system-enhancement/5-Phase5-Developer-Experience.md +532 -0
  19. plans/abandoned/hook-system-enhancement/6-Implementation-Timeline.md +274 -0
  20. plans/abandoned/hook-system-enhancement/7-Risk-Management.md +376 -0
  21. plans/abandoned/hook-system-enhancement/8-Testing-Strategy.md +579 -0
  22. plans/abandoned/readthedocs-automation/0-Overview.md +247 -0
  23. plans/abandoned/readthedocs-automation/1-Emergency-Documentation-Fixes.md +270 -0
  24. plans/abandoned/readthedocs-automation/2-Template-System-Enhancement.md +811 -0
  25. plans/abandoned/readthedocs-automation/3-Quality-Audit-ReadTheDocs-Integration.md +844 -0
  26. plans/abandoned/readthedocs-automation/4-Plan-Consolidation-Cleanup.md +632 -0
  27. plans/abandoned/readthedocs-automation/9-Closeout.md +207 -0
  28. plans/abandoned/readthedocs-automation/ABANDONMENT_REASON.md +72 -0
  29. plans/cicd-architecture-redesign/0-Overview.md +193 -0
  30. plans/cicd-architecture-redesign/1-Workflow-Creation.md +103 -0
  31. plans/cicd-architecture-redesign/2-Version-Detection.md +123 -0
  32. plans/cicd-architecture-redesign/3-Deployment-Gates.md +169 -0
  33. plans/cicd-architecture-redesign/4-RC-Testing.md +194 -0
  34. plans/cicd-architecture-redesign/5-TestPyPI-Validation.md +264 -0
  35. plans/cicd-architecture-redesign/6-Production-Release.md +263 -0
  36. plans/cicd-architecture-redesign/7-Cleanup.md +243 -0
  37. plans/cicd-architecture-redesign/8-Documentation.md +285 -0
  38. plans/cicd-architecture-redesign/Closeout.md +225 -0
  39. plans/closeout-template.md +259 -0
  40. plans/completed/circular-import-audit/0-Overview.md +152 -0
  41. plans/completed/circular-import-audit/1-Static-Dependency-Analysis.md +62 -0
  42. plans/completed/circular-import-audit/2-Dynamic-Import-Testing.md +56 -0
  43. plans/completed/circular-import-audit/3-Performance-Impact-Assessment.md +56 -0
  44. plans/completed/circular-import-audit/4-Issue-Remediation.md +78 -0
  45. plans/completed/circular-import-audit/5-Preventive-Infrastructure.md +89 -0
  46. plans/completed/claude-settings-ecosystem-alignment/0-Overview.md +162 -0
  47. plans/completed/claude-settings-ecosystem-alignment/1-Security-Foundation.md +148 -0
  48. plans/completed/claude-settings-ecosystem-alignment/2-Hook-Integration.md +158 -0
  49. plans/completed/claude-settings-ecosystem-alignment/3-Agent-System-Integration.md +177 -0
  50. plans/completed/claude-settings-ecosystem-alignment/4-Enhanced-Workflow-Automation.md +159 -0
  51. plans/completed/claude-settings-ecosystem-alignment/5-Validation-Monitoring.md +181 -0
  52. plans/completed/claude-settings-ecosystem-alignment/compacted_session_state.md +290 -0
  53. plans/completed/combined_plan_with_checklist_documentation/1-Overview-and-Goals.md +51 -0
  54. plans/completed/combined_plan_with_checklist_documentation/2-Toolchain-and-Hosting.md +69 -0
  55. plans/completed/combined_plan_with_checklist_documentation/3-Repository-Structure.md +61 -0
  56. plans/completed/combined_plan_with_checklist_documentation/4-Configuration-and-Standards.md +70 -0
  57. plans/completed/combined_plan_with_checklist_documentation/5-Documentation-Content.md +62 -0
  58. plans/completed/combined_plan_with_checklist_documentation/6-CI-CD-and-Validation.md +58 -0
  59. plans/completed/combined_plan_with_checklist_documentation/7-Maintenance.md +55 -0
  60. plans/completed/combined_test_plan_with_checklist_fitfunctions/0-Overview.md +135 -0
  61. plans/completed/combined_test_plan_with_checklist_fitfunctions/1-Common-fixtures.md +59 -0
  62. plans/completed/combined_test_plan_with_checklist_fitfunctions/10-power_laws.md +56 -0
  63. plans/completed/combined_test_plan_with_checklist_fitfunctions/2-core.py-FitFunction.md +118 -0
  64. plans/completed/combined_test_plan_with_checklist_fitfunctions/3-gaussians.py-Gaussian-GaussianNormalized-GaussianLn.md +69 -0
  65. plans/completed/combined_test_plan_with_checklist_fitfunctions/4-trend_fits.py-TrendFit.md +99 -0
  66. plans/completed/combined_test_plan_with_checklist_fitfunctions/5-plots.py-FFPlot.md +98 -0
  67. plans/completed/combined_test_plan_with_checklist_fitfunctions/6-tex_info.py-TeXinfo.md +79 -0
  68. plans/completed/combined_test_plan_with_checklist_fitfunctions/7-Justification.md +49 -0
  69. plans/completed/combined_test_plan_with_checklist_fitfunctions/8-exponentials.md +64 -0
  70. plans/completed/combined_test_plan_with_checklist_fitfunctions/9-lines.md +58 -0
  71. plans/completed/combined_test_plan_with_checklist_plotting/0-Overview.md +142 -0
  72. plans/completed/combined_test_plan_with_checklist_plotting/1-base.py.md +90 -0
  73. plans/completed/combined_test_plan_with_checklist_plotting/10-labels-special.py.md +102 -0
  74. plans/completed/combined_test_plan_with_checklist_plotting/11-labels-chemistry.py.md +212 -0
  75. plans/completed/combined_test_plan_with_checklist_plotting/12-labels-composition.py.md +242 -0
  76. plans/completed/combined_test_plan_with_checklist_plotting/13-labels-datetime.py.md +247 -0
  77. plans/completed/combined_test_plan_with_checklist_plotting/14-labels-elemental_abundance.py.md +274 -0
  78. plans/completed/combined_test_plan_with_checklist_plotting/15-visual-validation.md +256 -0
  79. plans/completed/combined_test_plan_with_checklist_plotting/16-integration-testing.md +266 -0
  80. plans/completed/combined_test_plan_with_checklist_plotting/17-performance-benchmarks.md +267 -0
  81. plans/completed/combined_test_plan_with_checklist_plotting/18-Fixtures-and-Utilities.md +86 -0
  82. plans/completed/combined_test_plan_with_checklist_plotting/2-agg_plot.py.md +90 -0
  83. plans/completed/combined_test_plan_with_checklist_plotting/3-histograms.py.md +201 -0
  84. plans/completed/combined_test_plan_with_checklist_plotting/4-scatter.py.md +167 -0
  85. plans/completed/combined_test_plan_with_checklist_plotting/5-spiral.py.md +216 -0
  86. plans/completed/combined_test_plan_with_checklist_plotting/6-orbits.py.md +108 -0
  87. plans/completed/combined_test_plan_with_checklist_plotting/7-tools.py.md +86 -0
  88. plans/completed/combined_test_plan_with_checklist_plotting/8-select_data_from_figure.py.md +97 -0
  89. plans/completed/combined_test_plan_with_checklist_plotting/9-labels-base.py.md +88 -0
  90. plans/completed/combined_test_plan_with_checklist_solar_activity/.gitkeep +0 -0
  91. plans/completed/combined_test_plan_with_checklist_solar_activity/0-Overview.md +170 -0
  92. plans/completed/combined_test_plan_with_checklist_solar_activity/1-Package-Entry-Point-__init__.py.md +121 -0
  93. plans/completed/combined_test_plan_with_checklist_solar_activity/2-Core-Base-Classes-base.py.md +142 -0
  94. plans/completed/combined_test_plan_with_checklist_solar_activity/3-Plotting-Helpers-plots.py.md +123 -0
  95. plans/completed/combined_test_plan_with_checklist_solar_activity/4-LISIRD-Sub-package.md +119 -0
  96. plans/completed/combined_test_plan_with_checklist_solar_activity/5-Extrema-Calculator.md +103 -0
  97. plans/completed/combined_test_plan_with_checklist_solar_activity/6-Sunspot-Number-Sub-package.md +163 -0
  98. plans/completed/combined_test_plan_with_checklist_solar_activity/7-Sunspot-Number-Init.py.md +217 -0
  99. plans/completed/combined_test_plan_with_checklist_solar_activity/compacted_state.md +52 -0
  100. plans/completed/compaction-agent-modernization/0-Overview.md +156 -0
  101. plans/completed/compaction-agent-modernization/1-Architecture-Audit-Gap-Analysis.md +132 -0
  102. plans/completed/compaction-agent-modernization/2-Token-Baseline-Recalibration.md +153 -0
  103. plans/completed/compaction-agent-modernization/3-Agent-Reference-Updates.md +184 -0
  104. plans/completed/compaction-agent-modernization/4-Compression-Algorithm-Modernization.md +238 -0
  105. plans/completed/compaction-agent-modernization/5-Workflow-Integration-Streamlining.md +252 -0
  106. plans/completed/compaction-agent-modernization/6-Template-Structure-Optimization.md +240 -0
  107. plans/completed/compaction-agent-modernization/7-Integration-Testing-Validation.md +292 -0
  108. plans/completed/compaction-hook-enhancement/0-Overview.md +150 -0
  109. plans/completed/compaction-hook-enhancement/1-Token-Estimation-Enhancement.md +179 -0
  110. plans/completed/compaction-hook-enhancement/2-Compression-Intelligence.md +294 -0
  111. plans/completed/compaction-hook-enhancement/3-Git-Integration-Metadata.md +310 -0
  112. plans/completed/compaction-hook-enhancement/4-Session-Continuity-Features.md +358 -0
  113. plans/completed/compaction-hook-enhancement/5-Testing-Strategy.md +404 -0
  114. plans/completed/compaction-hook-enhancement/6-Integration-Roadmap.md +319 -0
  115. plans/completed/compaction-hook-enhancement/compacted_state.md +142 -0
  116. plans/completed/docstring-audit-enhancement/0-Overview.md +274 -0
  117. plans/completed/docstring-audit-enhancement/1-Infrastructure-Setup-and-Validation-Tools.md +206 -0
  118. plans/completed/docstring-audit-enhancement/2-Core-Physics-Modules-Enhancement.md +237 -0
  119. plans/completed/docstring-audit-enhancement/3-Fitfunctions-Mathematical-Modules-Enhancement.md +188 -0
  120. plans/completed/docstring-audit-enhancement/4-Plotting-Visualization-Modules-Enhancement.md +243 -0
  121. plans/completed/docstring-audit-enhancement/5-Specialized-Modules-Enhancement.md +216 -0
  122. plans/completed/docstring-audit-enhancement/6-Validation-and-Integration.md +216 -0
  123. plans/completed/fitfunctions-testing-implementation/0-Overview.md +130 -0
  124. plans/completed/fitfunctions-testing-implementation/1-Test-Infrastructure-Setup.md +79 -0
  125. plans/completed/fitfunctions-testing-implementation/2-Common-Fixtures-Test-Utilities.md +104 -0
  126. plans/completed/fitfunctions-testing-implementation/3-Core-FitFunction-Testing.md +168 -0
  127. plans/completed/fitfunctions-testing-implementation/4-Specialized-Function-Classes.md +210 -0
  128. plans/completed/fitfunctions-testing-implementation/5-Advanced-Classes-Testing.md +214 -0
  129. plans/completed/fitfunctions-testing-implementation/6-Plotting-Integration-Testing.md +231 -0
  130. plans/completed/fitfunctions-testing-implementation/7-Extended-Coverage-BONUS.md +184 -0
  131. plans/completed/numpy-docstring-conversion-plan/numpy-docstring-conversion-plan.md +118 -0
  132. plans/completed/pr-review-remediation/0-Overview.md +138 -0
  133. plans/completed/pr-review-remediation/1-Critical-Safety-Improvements.md +179 -0
  134. plans/completed/pr-review-remediation/2-Smart-Timeouts-Validation.md +399 -0
  135. plans/completed/pr-review-remediation/3-Enhanced-GitHub-Integration.md +258 -0
  136. plans/completed/pr-review-remediation/compacted_state.md +66 -0
  137. plans/completed/python-310-migration/0-Overview.md +390 -0
  138. plans/completed/python-310-migration/1-Planning-Setup.md +164 -0
  139. plans/completed/python-310-migration/2-Implementation.md +256 -0
  140. plans/completed/python-310-migration/3-Testing-Validation.md +335 -0
  141. plans/completed/python-310-migration/4-Documentation-Release.md +274 -0
  142. plans/completed/python-310-migration/5-Closeout.md +252 -0
  143. plans/completed/requirements-management-consolidation/0-Overview.md +118 -0
  144. plans/completed/requirements-management-consolidation/1-Documentation-Validation-Environment-Setup.md +116 -0
  145. plans/completed/requirements-management-consolidation/2-Requirements-Consolidation.md +161 -0
  146. plans/completed/requirements-management-consolidation/3-Workflow-Automation-Final-Integration.md +196 -0
  147. plans/completed/single-ecosystem-plan-implementation/0-Overview.md +83 -0
  148. plans/completed/single-ecosystem-plan-implementation/1-Plan-Preservation-Session-Management.md +38 -0
  149. plans/completed/single-ecosystem-plan-implementation/2-File-Structure-Optimization.md +43 -0
  150. plans/completed/single-ecosystem-plan-implementation/3-Plan-Migration-Archive-Setup.md +82 -0
  151. plans/completed/single-ecosystem-plan-implementation/4-Agent-System-Transformation.md +108 -0
  152. plans/completed/single-ecosystem-plan-implementation/5-Template-System-Enhancement.md +131 -0
  153. plans/completed/single-ecosystem-plan-implementation/6-Final-Validation-Testing.md +120 -0
  154. plans/completed/test-directory-consolidation/0-Overview.md +51 -0
  155. plans/completed/test-directory-consolidation/1-Structure-Preparation.md +82 -0
  156. plans/completed/test-directory-consolidation/2-File-Migration.md +100 -0
  157. plans/completed/test-directory-consolidation/3-Import-Transformation.md +117 -0
  158. plans/completed/test-directory-consolidation/4-Configuration-Consolidation.md +140 -0
  159. plans/completed/test-directory-consolidation/5-Validation.md +152 -0
  160. plans/completed/test-directory-consolidation/6-Cleanup.md +156 -0
  161. plans/completed/test-planning-agents-architecture/0-Overview.md +79 -0
  162. plans/completed/test-planning-agents-architecture/1-Branch-Isolation-Testing.md +49 -0
  163. plans/completed/test-planning-agents-architecture/2-Cross-Branch-Coordination.md +51 -0
  164. plans/completed/test-planning-agents-architecture/3-Merge-Workflow-Testing.md +48 -0
  165. plans/deployment-semver-pypi-rtd/0-Overview.md +463 -0
  166. plans/deployment-semver-pypi-rtd/1-Semantic-Versioning-Foundation.md +136 -0
  167. plans/deployment-semver-pypi-rtd/2-PyPI-Deployment-Infrastructure.md +168 -0
  168. plans/deployment-semver-pypi-rtd/3-Release-Automation.md +214 -0
  169. plans/deployment-semver-pypi-rtd/4-Plan-Closeout.md +543 -0
  170. plans/deployment-semver-pypi-rtd/compacted_session_state.md +172 -0
  171. plans/deployment-semver-pypi-rtd/compacted_state.md +131 -0
  172. plans/documentation-code-audit/0-Overview.md +393 -0
  173. plans/documentation-code-audit/1-Discovery-Inventory.md +183 -0
  174. plans/documentation-code-audit/2-Execution-Environment-Setup.md +263 -0
  175. plans/documentation-code-audit/3-Systematic-Validation.md +322 -0
  176. plans/documentation-code-audit/4-Code-Example-Remediation.md +358 -0
  177. plans/documentation-code-audit/5-Physics-MultiIndex-Compliance.md +464 -0
  178. plans/documentation-code-audit/6-Doctest-Integration.md +523 -0
  179. plans/documentation-code-audit/7-Reporting-Documentation.md +498 -0
  180. plans/documentation-code-audit/8-Closeout.md +456 -0
  181. plans/documentation-rebuild-session/compacted_state.md +109 -0
  182. plans/documentation-rendering-fixes/0-Overview.md +104 -0
  183. plans/documentation-rendering-fixes/1-Sphinx-Build-Diagnostics-Warning-Audit.md +101 -0
  184. plans/documentation-rendering-fixes/2-Configuration-Infrastructure-Fixes.md +113 -0
  185. plans/documentation-rendering-fixes/3-Docstring-Syntax-Audit-Repair.md +131 -0
  186. plans/documentation-rendering-fixes/4-HTML-Page-Rendering-Verification.md +113 -0
  187. plans/documentation-rendering-fixes/5-Advanced-Documentation-Quality-Assurance.md +119 -0
  188. plans/documentation-rendering-fixes/6-Documentation-Build-Optimization-Testing.md +129 -0
  189. plans/documentation-rendering-fixes/compacted_state.md +132 -0
  190. plans/documentation-template-fix/0-Overview.md +197 -0
  191. plans/documentation-template-fix/1-Template-System-Analysis.md +269 -0
  192. plans/documentation-template-fix/2-Template-Modification.md +609 -0
  193. plans/documentation-template-fix/3-Build-System-Integration.md +766 -0
  194. plans/documentation-template-fix/4-Testing-Validation.md +1399 -0
  195. plans/documentation-template-fix/5-Documentation-Training.md +602 -0
  196. plans/documentation-workflow-fix/0-Overview.md +222 -0
  197. plans/documentation-workflow-fix/1-Immediate-Fixes.md +238 -0
  198. plans/documentation-workflow-fix/2-Configuration-Setup.md +298 -0
  199. plans/documentation-workflow-fix/3-Pre-commit-Integration.md +382 -0
  200. plans/documentation-workflow-fix/4-Workflow-Improvements.md +446 -0
  201. plans/documentation-workflow-fix/5-Documentation-and-Training.md +527 -0
  202. plans/duplicate-object-warnings-fix-plan.md +130 -0
  203. plans/github-issues-migration/0-Overview.md +510 -0
  204. plans/github-issues-migration/1-Foundation-Label-System.md +180 -0
  205. plans/github-issues-migration/2-Migration-Tool-Rewrite.md +235 -0
  206. plans/github-issues-migration/3-CLI-Integration-Automation.md +169 -0
  207. plans/github-issues-migration/4-Validated-Migration.md +252 -0
  208. plans/github-issues-migration/5-Documentation-Training.md +171 -0
  209. plans/github-issues-migration/6-Closeout.md +179 -0
  210. plans/github-workflows-repair/repair-plan.md +299 -0
  211. plans/issues_from_plans.py +342 -0
  212. plans/pr-270-doc-validation-fixes/0-Overview.md +354 -0
  213. plans/pr-270-doc-validation-fixes/1-Critical-PR-Fixes.md +117 -0
  214. plans/pr-270-doc-validation-fixes/2-Framework-Right-Sizing.md +129 -0
  215. plans/pr-270-doc-validation-fixes/3-Sustainable-Documentation.md +126 -0
  216. plans/pr-270-doc-validation-fixes/4-Closeout-Migration.md +143 -0
  217. plans/pr-270-doc-validation-fixes/PLAN_COMPLETED.md +149 -0
  218. plans/python-310-migration/0-Overview.md +390 -0
  219. plans/python-310-migration/1-Planning-Setup.md +164 -0
  220. plans/python-310-migration/2-Implementation.md +256 -0
  221. plans/python-310-migration/3-Testing-Validation.md +335 -0
  222. plans/python-310-migration/4-Documentation-Release.md +274 -0
  223. plans/python-310-migration/5-Closeout.md +252 -0
  224. plans/readthedocs-simplified/0-Overview.md +243 -0
  225. plans/readthedocs-simplified/1-Immediate-Fixes.md +216 -0
  226. plans/readthedocs-simplified/2-Template-Simplification.md +278 -0
  227. plans/readthedocs-simplified/3-ReadTheDocs-Setup.md +298 -0
  228. plans/readthedocs-simplified/4-Testing-Validation.md +328 -0
  229. plans/readthedocs-simplified/5-Closeout.md +231 -0
  230. plans/readthedocs-simplified/compacted_state.md +127 -0
  231. plans/session-compaction-2025-08-12/compacted_state.md +114 -0
  232. plans/session-compaction-2025-08-13/compacted_state.md +145 -0
  233. plans/session-continuity-protocol/0-Overview.md +35 -0
  234. plans/session-continuity-protocol/1-Core-Principles-Framework.md +40 -0
  235. plans/session-continuity-protocol/2-Pre-Session-Validation-System.md +79 -0
  236. plans/session-continuity-protocol/3-Context-Switching-Prevention.md +87 -0
  237. plans/session-continuity-protocol/4-Progress-Tracking-Recovery.md +100 -0
  238. plans/sphinx-warnings-analysis.md +222 -0
  239. plans/systemprompt-optimization/0-Overview.md +447 -0
  240. plans/systemprompt-optimization/1-Deploy-SystemPrompt.md +114 -0
  241. plans/systemprompt-optimization/2-Documentation-Alignment.md +198 -0
  242. plans/systemprompt-optimization/3-Monitoring-Infrastructure.md +396 -0
  243. plans/systemprompt-optimization/4-Implementation-Script.md +450 -0
  244. plans/systemprompt-optimization/9-Closeout.md +165 -0
  245. plans/systemprompt-optimization/compacted_state.md +143 -0
  246. plans/template-value-propositions/0-Overview.md +357 -0
  247. plans/template-value-propositions/1-Value-Proposition-Framework-Design.md +144 -0
  248. plans/template-value-propositions/2-Plan-Template-Enhancement.md +178 -0
  249. plans/template-value-propositions/3-Value-Generator-Hook-Implementation.md +291 -0
  250. plans/template-value-propositions/4-Value-Validator-Hook-Implementation.md +274 -0
  251. plans/template-value-propositions/5-Documentation-Agent-Updates.md +219 -0
  252. plans/template-value-propositions/6-Integration-Testing-Validation.md +247 -0
  253. plans/tests-audit/0-Overview.md +410 -0
  254. plans/tests-audit/1-Discovery-Inventory.md +170 -0
  255. plans/tests-audit/2-Physics-Validation-Audit.md +195 -0
  256. plans/tests-audit/3-Architecture-Compliance.md +195 -0
  257. plans/tests-audit/4-Numerical-Stability-Analysis.md +203 -0
  258. plans/tests-audit/5-Documentation-Enhancement.md +220 -0
  259. plans/tests-audit/6-Audit-Deliverables.md +220 -0
  260. plans/tests-audit/7-Closeout.md +252 -0
  261. plans/tests-audit/artifacts/ARCHITECTURE_COMPLIANCE_REPORT.md +315 -0
  262. plans/tests-audit/artifacts/ARCHITECTURE_RECOMMENDATIONS.md +943 -0
  263. plans/tests-audit/artifacts/COMPREHENSIVE_AUDIT_REPORT.md +356 -0
  264. plans/tests-audit/artifacts/CONTRIBUTING_ENHANCED_TEMPLATE.md +419 -0
  265. plans/tests-audit/artifacts/COVERAGE_GAP_ANALYSIS.md +152 -0
  266. plans/tests-audit/artifacts/DOCUMENTATION_ENHANCEMENT_REPORT.md +502 -0
  267. plans/tests-audit/artifacts/EXECUTIVE_AUDIT_SUMMARY.md +129 -0
  268. plans/tests-audit/artifacts/IMPLEMENTATION_ROADMAP.md +647 -0
  269. plans/tests-audit/artifacts/NUMERICAL_RECOMMENDATIONS.md +739 -0
  270. plans/tests-audit/artifacts/NUMERICAL_STABILITY_GUIDE_TEMPLATE.rst +451 -0
  271. plans/tests-audit/artifacts/NUMERICAL_STABILITY_REPORT.md +301 -0
  272. plans/tests-audit/artifacts/PHASE_3_SUMMARY.md +280 -0
  273. plans/tests-audit/artifacts/PHASE_4_SUMMARY.md +229 -0
  274. plans/tests-audit/artifacts/PHASE_5_SUMMARY.md +292 -0
  275. plans/tests-audit/artifacts/PHASE_6_CLOSEOUT.md +278 -0
  276. plans/tests-audit/artifacts/PHYSICS_GUIDE_TEMPLATE.rst +268 -0
  277. plans/tests-audit/artifacts/PHYSICS_VALIDATION_REPORT.md +235 -0
  278. plans/tests-audit/artifacts/TECHNICAL_DELIVERABLES_PACKAGE.md +2502 -0
  279. plans/tests-audit/artifacts/TEST_INVENTORY.csv +1204 -0
  280. plans/tests-audit/artifacts/TEST_INVENTORY.md +135 -0
  281. plans/tests-audit/artifacts/test_discovery_analysis.py +231 -0
  282. plans/tests-audit/artifacts/test_parser.py +395 -0
  283. solarwindpy/README.md +3 -0
  284. solarwindpy/Untitled.ipynb +54 -0
  285. solarwindpy/__init__.py +74 -0
  286. solarwindpy/core/__init__.py +23 -0
  287. solarwindpy/core/alfvenic_turbulence.py +804 -0
  288. solarwindpy/core/base.py +267 -0
  289. solarwindpy/core/ions.py +309 -0
  290. solarwindpy/core/plasma.py +2133 -0
  291. solarwindpy/core/spacecraft.py +256 -0
  292. solarwindpy/core/tensor.py +90 -0
  293. solarwindpy/core/units_constants.py +199 -0
  294. solarwindpy/core/vector.py +328 -0
  295. solarwindpy/fitfunctions/__init__.py +20 -0
  296. solarwindpy/fitfunctions/core.py +734 -0
  297. solarwindpy/fitfunctions/exponentials.py +188 -0
  298. solarwindpy/fitfunctions/gaussians.py +264 -0
  299. solarwindpy/fitfunctions/lines.py +116 -0
  300. solarwindpy/fitfunctions/moyal.py +71 -0
  301. solarwindpy/fitfunctions/plots.py +751 -0
  302. solarwindpy/fitfunctions/power_laws.py +209 -0
  303. solarwindpy/fitfunctions/tex_info.py +568 -0
  304. solarwindpy/fitfunctions/trend_fits.py +482 -0
  305. solarwindpy/instabilities/__init__.py +16 -0
  306. solarwindpy/instabilities/beta_ani.py +82 -0
  307. solarwindpy/instabilities/verscharen2016.py +631 -0
  308. solarwindpy/plotting/__init__.py +33 -0
  309. solarwindpy/plotting/agg_plot.py +489 -0
  310. solarwindpy/plotting/base.py +465 -0
  311. solarwindpy/plotting/hist1d.py +405 -0
  312. solarwindpy/plotting/hist2d.py +1035 -0
  313. solarwindpy/plotting/histograms.py +1845 -0
  314. solarwindpy/plotting/labels/__init__.py +104 -0
  315. solarwindpy/plotting/labels/base.py +686 -0
  316. solarwindpy/plotting/labels/chemistry.py +19 -0
  317. solarwindpy/plotting/labels/composition.py +100 -0
  318. solarwindpy/plotting/labels/datetime.py +235 -0
  319. solarwindpy/plotting/labels/elemental_abundance.py +73 -0
  320. solarwindpy/plotting/labels/special.py +794 -0
  321. solarwindpy/plotting/orbits.py +515 -0
  322. solarwindpy/plotting/scatter.py +99 -0
  323. solarwindpy/plotting/select_data_from_figure.py +329 -0
  324. solarwindpy/plotting/spiral.py +980 -0
  325. solarwindpy/plotting/tools.py +434 -0
  326. solarwindpy/scripts/__init__.py +1 -0
  327. solarwindpy/scripts/logs/.gitignore +1 -0
  328. solarwindpy/solar_activity/__init__.py +53 -0
  329. solarwindpy/solar_activity/base.py +605 -0
  330. solarwindpy/solar_activity/lisird/__init__.py +3 -0
  331. solarwindpy/solar_activity/lisird/extrema_calculator.py +394 -0
  332. solarwindpy/solar_activity/lisird/lisird.py +319 -0
  333. solarwindpy/solar_activity/plots.py +116 -0
  334. solarwindpy/solar_activity/sunspot_number/.DS_Store +0 -0
  335. solarwindpy/solar_activity/sunspot_number/__init__.py +3 -0
  336. solarwindpy/solar_activity/sunspot_number/sidc.py +556 -0
  337. solarwindpy/solar_activity/sunspot_number/ssn_extrema.csv +72 -0
  338. solarwindpy/solar_activity/sunspot_number/ssn_extrema.csv.silso +72 -0
  339. solarwindpy/tools/__init__.py +162 -0
  340. solarwindpy-0.1.1.dist-info/METADATA +181 -0
  341. solarwindpy-0.1.1.dist-info/RECORD +409 -0
  342. {solarwindpy-0.0.1.dev0.dist-info → solarwindpy-0.1.1.dist-info}/WHEEL +1 -1
  343. solarwindpy-0.1.1.dist-info/licenses/LICENSE.rst +32 -0
  344. solarwindpy-0.1.1.dist-info/top_level.txt +3 -0
  345. tests/__init__.py +1 -0
  346. tests/conftest.py +10 -0
  347. tests/core/__init__.py +1 -0
  348. tests/core/test_alfvenic_turbulence.py +544 -0
  349. tests/core/test_base.py +112 -0
  350. tests/core/test_base_head_tail.py +29 -0
  351. tests/core/test_base_mi_tuples.py +11 -0
  352. tests/core/test_core_verify_datetimeindex.py +32 -0
  353. tests/core/test_ions.py +325 -0
  354. tests/core/test_plasma.py +2581 -0
  355. tests/core/test_plasma_io.py +12 -0
  356. tests/core/test_quantities.py +507 -0
  357. tests/core/test_spacecraft.py +210 -0
  358. tests/core/test_units_constants.py +22 -0
  359. tests/data/epoch.csv +4 -0
  360. tests/data/plasma.csv +4 -0
  361. tests/data/spacecraft.csv +4 -0
  362. tests/fitfunctions/conftest.py +60 -0
  363. tests/fitfunctions/test_core.py +193 -0
  364. tests/fitfunctions/test_exponentials.py +342 -0
  365. tests/fitfunctions/test_gaussians.py +142 -0
  366. tests/fitfunctions/test_lines.py +349 -0
  367. tests/fitfunctions/test_moyal.py +258 -0
  368. tests/fitfunctions/test_plots.py +258 -0
  369. tests/fitfunctions/test_power_laws.py +365 -0
  370. tests/fitfunctions/test_tex_info.py +183 -0
  371. tests/fitfunctions/test_trend_fit_properties.py +31 -0
  372. tests/fitfunctions/test_trend_fits.py +244 -0
  373. tests/plotting/__init__.py +1 -0
  374. tests/plotting/labels/__init__.py +1 -0
  375. tests/plotting/labels/test_chemistry.py +243 -0
  376. tests/plotting/labels/test_composition.py +345 -0
  377. tests/plotting/labels/test_datetime.py +445 -0
  378. tests/plotting/labels/test_elemental_abundance.py +366 -0
  379. tests/plotting/labels/test_init.py +66 -0
  380. tests/plotting/labels/test_labels_base.py +347 -0
  381. tests/plotting/labels/test_special.py +550 -0
  382. tests/plotting/test_agg_plot.py +602 -0
  383. tests/plotting/test_base.py +752 -0
  384. tests/plotting/test_fixtures_utilities.py +775 -0
  385. tests/plotting/test_histograms.py +546 -0
  386. tests/plotting/test_integration.py +675 -0
  387. tests/plotting/test_orbits.py +435 -0
  388. tests/plotting/test_performance.py +708 -0
  389. tests/plotting/test_scatter.py +752 -0
  390. tests/plotting/test_select_data_from_figure.py +1209 -0
  391. tests/plotting/test_spiral.py +573 -0
  392. tests/plotting/test_tools.py +607 -0
  393. tests/plotting/test_visual_validation.py +465 -0
  394. tests/solar_activity/__init__.py +1 -0
  395. tests/solar_activity/lisird/__init__.py +1 -0
  396. tests/solar_activity/lisird/test_extrema_calculator.py +593 -0
  397. tests/solar_activity/lisird/test_lisird_id.py +187 -0
  398. tests/solar_activity/sunspot_number/__init__.py +1 -0
  399. tests/solar_activity/sunspot_number/test_init.py +399 -0
  400. tests/solar_activity/sunspot_number/test_sidc.py +465 -0
  401. tests/solar_activity/sunspot_number/test_sidc_id.py +223 -0
  402. tests/solar_activity/sunspot_number/test_sidc_loader.py +275 -0
  403. tests/solar_activity/sunspot_number/test_ssn_extrema.py +406 -0
  404. tests/solar_activity/test_base.py +656 -0
  405. tests/solar_activity/test_init.py +396 -0
  406. tests/solar_activity/test_plots.py +371 -0
  407. tests/test_circular_imports.py +408 -0
  408. tests/test_issue_titles.py +25 -0
  409. tests/test_statusline.py +298 -0
  410. solarwindpy-0.0.1.dev0.dist-info/METADATA +0 -14
  411. solarwindpy-0.0.1.dev0.dist-info/RECORD +0 -4
  412. solarwindpy-0.0.1.dev0.dist-info/top_level.txt +0 -1
@@ -0,0 +1,313 @@
1
+ # Phase 1: Core Infrastructure
2
+
3
+ ## Phase Metadata
4
+ - **Phase**: 1/5
5
+ - **Estimated Duration**: 6-8 hours
6
+ - **Dependencies**: None
7
+ - **Status**: Not Started
8
+
9
+ ## 🎯 Phase Objective
10
+ Establish the foundational infrastructure for the enhanced hook system, including agent coordination, configuration management, and core hook architecture. This phase creates the backbone that all subsequent phases will build upon.
11
+
12
+ ## 🧠 Phase Context
13
+ The current SolarWindPy development environment has basic git hooks and manual validation processes. This phase transforms that into an intelligent, agent-integrated system that maintains scientific rigor while automating routine tasks. The infrastructure must support the existing agent ecosystem while providing extensibility for future enhancements.
14
+
15
+ ## 📋 Implementation Tasks
16
+
17
+ ### Task Group 1: Enhanced Hook Architecture
18
+ - [ ] **Create Hook Manager System** (Est: 90 min) - Central coordination system for all hooks
19
+ - Commit: `<checksum>`
20
+ - Status: Pending
21
+ - Files: `.claude/hooks/hook_manager.py`
22
+ - Notes: Implements HookManager class with agent integration, error handling, and performance monitoring
23
+
24
+ - [ ] **Implement Agent Integration Interface** (Est: 60 min) - Standardized interface for agent communication
25
+ - Commit: `<checksum>`
26
+ - Status: Pending
27
+ - Files: `.claude/hooks/agent_interface.py`
28
+ - Notes: AgentInterface class with async communication, timeout handling, and result validation
29
+
30
+ - [ ] **Create Configuration Management System** (Est: 45 min) - Centralized configuration for hooks and agents
31
+ - Commit: `<checksum>`
32
+ - Status: Pending
33
+ - Files: `.claude/config/hook_config.yaml`, `.claude/hooks/config_manager.py`
34
+ - Notes: YAML-based configuration with validation, environment-specific overrides
35
+
36
+ ### Task Group 2: Core Hook Implementation
37
+ - [ ] **Enhanced Pre-commit Hook** (Est: 75 min) - Intelligent pre-commit validation with agent coordination
38
+ - Commit: `<checksum>`
39
+ - Status: Pending
40
+ - Files: `.claude/hooks/pre-commit`, `.claude/hooks/pre_commit_handler.py`
41
+ - Notes: Physics validation, code quality, test selection, and agent orchestration
42
+
43
+ - [ ] **Advanced Pre-push Hook** (Est: 60 min) - Comprehensive validation before remote push
44
+ - Commit: `<checksum>`
45
+ - Status: Pending
46
+ - Files: `.claude/hooks/pre-push`, `.claude/hooks/pre_push_handler.py`
47
+ - Notes: Full test suite, physics validation, performance benchmarks
48
+
49
+ - [ ] **Post-commit Analytics Hook** (Est: 45 min) - Data collection and metrics tracking
50
+ - Commit: `<checksum>`
51
+ - Status: Pending
52
+ - Files: `.claude/hooks/post-commit`, `.claude/hooks/post_commit_handler.py`
53
+ - Notes: Performance metrics, code complexity analysis, change impact assessment
54
+
55
+ ### Task Group 3: Agent Coordination Framework
56
+ - [ ] **Agent Registry System** (Est: 30 min) - Dynamic agent discovery and management
57
+ - Commit: `<checksum>`
58
+ - Status: Pending
59
+ - Files: `.claude/hooks/agent_registry.py`
60
+ - Notes: AgentRegistry class with dynamic loading, capability mapping, and health monitoring
61
+
62
+ - [ ] **Task Routing Engine** (Est: 45 min) - Intelligent task routing to appropriate agents
63
+ - Commit: `<checksum>`
64
+ - Status: Pending
65
+ - Files: `.claude/hooks/task_router.py`
66
+ - Notes: Rule-based routing, load balancing, and fallback mechanisms
67
+
68
+ - [ ] **Agent Communication Protocol** (Est: 30 min) - Standardized communication patterns
69
+ - Commit: `<checksum>`
70
+ - Status: Pending
71
+ - Files: `.claude/hooks/agent_protocol.py`
72
+ - Notes: Message formats, error handling, and timeout management
73
+
74
+ ### Task Group 4: Error Handling and Logging
75
+ - [ ] **Comprehensive Error Handling** (Est: 45 min) - Robust error handling across the hook system
76
+ - Commit: `<checksum>`
77
+ - Status: Pending
78
+ - Files: `.claude/hooks/error_handler.py`
79
+ - Notes: Error classification, recovery strategies, and user-friendly error messages
80
+
81
+ - [ ] **Advanced Logging System** (Est: 30 min) - Detailed logging for debugging and monitoring
82
+ - Commit: `<checksum>`
83
+ - Status: Pending
84
+ - Files: `.claude/hooks/logger.py`
85
+ - Notes: Structured logging, log rotation, and performance tracking
86
+
87
+ - [ ] **Fallback Mechanisms** (Est: 30 min) - Graceful degradation when components fail
88
+ - Commit: `<checksum>`
89
+ - Status: Pending
90
+ - Files: `.claude/hooks/fallback_handler.py`
91
+ - Notes: Fallback to existing hooks, partial validation modes, and user notifications
92
+
93
+ ### Task Group 5: Installation and Migration
94
+ - [ ] **Hook Installation Script** (Est: 30 min) - Automated installation of enhanced hooks
95
+ - Commit: `<checksum>`
96
+ - Status: Pending
97
+ - Files: `.claude/scripts/install_hooks.py`
98
+ - Notes: Backup existing hooks, install new system, validate installation
99
+
100
+ - [ ] **Migration Utilities** (Est: 45 min) - Tools for migrating from existing hook system
101
+ - Commit: `<checksum>`
102
+ - Status: Pending
103
+ - Files: `.claude/scripts/migrate_hooks.py`
104
+ - Notes: Configuration migration, custom hook preservation, validation
105
+
106
+ - [ ] **Validation Scripts** (Est: 30 min) - Verify correct installation and functionality
107
+ - Commit: `<checksum>`
108
+ - Status: Pending
109
+ - Files: `.claude/scripts/validate_installation.py`
110
+ - Notes: End-to-end testing, agent connectivity, performance validation
111
+
112
+ ## ✅ Phase Acceptance Criteria
113
+ - [ ] Hook Manager system operational with agent integration
114
+ - [ ] All core hooks (pre-commit, pre-push, post-commit) enhanced and functional
115
+ - [ ] Agent coordination framework fully implemented
116
+ - [ ] Configuration management system deployed
117
+ - [ ] Error handling and logging systems operational
118
+ - [ ] Installation and migration scripts tested
119
+ - [ ] All existing functionality preserved
120
+ - [ ] Performance baseline established
121
+ - [ ] Phase tests pass with >95% coverage
122
+ - [ ] Agent integration validated with existing agents
123
+ - [ ] Documentation for core infrastructure complete
124
+
125
+ ## 🧪 Phase Testing Strategy
126
+
127
+ ### Unit Testing
128
+ - **Hook Components**: Individual hook functionality and error handling
129
+ - **Agent Interface**: Communication protocols and timeout handling
130
+ - **Configuration**: YAML parsing, validation, and environment handling
131
+ - **Error Handling**: Exception handling and recovery mechanisms
132
+
133
+ ### Integration Testing
134
+ - **Agent Coordination**: Full agent integration workflow
135
+ - **Hook Orchestration**: Complete hook execution pipeline
136
+ - **Configuration Integration**: End-to-end configuration management
137
+ - **Migration Testing**: Existing system to new system migration
138
+
139
+ ### Performance Testing
140
+ - **Hook Execution Speed**: Baseline measurement and optimization
141
+ - **Agent Communication**: Latency and throughput testing
142
+ - **Memory Usage**: Resource consumption monitoring
143
+ - **Concurrent Operations**: Multi-agent coordination performance
144
+
145
+ ### Scientific Validation
146
+ - **Physics Code Preservation**: All existing physics validation intact
147
+ - **Data Structure Handling**: MultiIndex DataFrame operations preserved
148
+ - **Scientific Workflow**: End-to-end research workflow validation
149
+
150
+ ## 🔧 Phase Technical Requirements
151
+
152
+ ### Dependencies
153
+ - **Python 3.9+**: Core implementation language
154
+ - **PyYAML**: Configuration file handling
155
+ - **asyncio**: Asynchronous agent communication
156
+ - **logging**: Enhanced logging capabilities
157
+ - **pathlib**: Path handling and file operations
158
+ - **subprocess**: Git hook execution
159
+ - **json**: Data serialization for agent communication
160
+
161
+ ### Environment
162
+ - **Git Repository**: Valid git repository with existing hooks
163
+ - **Python Environment**: Activated conda environment
164
+ - **File Permissions**: Write access to .claude/ directory
165
+ - **Agent Access**: Access to existing agent system
166
+
167
+ ### Constraints
168
+ - **Backward Compatibility**: Existing workflows must continue functioning
169
+ - **Performance**: Hook execution time must remain reasonable
170
+ - **Scientific Integrity**: No compromise on physics validation accuracy
171
+ - **Error Recovery**: System must gracefully handle agent failures
172
+
173
+ ## 📂 Phase Affected Areas
174
+
175
+ ### New Files Created
176
+ - `.claude/hooks/hook_manager.py` - Central hook coordination
177
+ - `.claude/hooks/agent_interface.py` - Agent communication interface
178
+ - `.claude/hooks/config_manager.py` - Configuration management
179
+ - `.claude/hooks/pre_commit_handler.py` - Enhanced pre-commit logic
180
+ - `.claude/hooks/pre_push_handler.py` - Enhanced pre-push logic
181
+ - `.claude/hooks/post_commit_handler.py` - Post-commit analytics
182
+ - `.claude/hooks/agent_registry.py` - Agent discovery and management
183
+ - `.claude/hooks/task_router.py` - Intelligent task routing
184
+ - `.claude/hooks/agent_protocol.py` - Communication protocols
185
+ - `.claude/hooks/error_handler.py` - Error handling system
186
+ - `.claude/hooks/logger.py` - Logging infrastructure
187
+ - `.claude/hooks/fallback_handler.py` - Fallback mechanisms
188
+ - `.claude/config/hook_config.yaml` - Main configuration file
189
+ - `.claude/scripts/install_hooks.py` - Installation automation
190
+ - `.claude/scripts/migrate_hooks.py` - Migration utilities
191
+ - `.claude/scripts/validate_installation.py` - Installation validation
192
+
193
+ ### Modified Files
194
+ - `.claude/hooks/pre-commit` - Enhanced with new handler
195
+ - `.claude/hooks/pre-push` - Enhanced with new handler
196
+ - `.claude/hooks/post-commit` - Enhanced with analytics
197
+ - `.gitignore` - Add hook system logs and temporary files
198
+
199
+ ### Preserved Files
200
+ - All existing physics validation scripts
201
+ - Current test suite structure
202
+ - Existing agent implementations
203
+ - Current development workflow files
204
+
205
+ ## 📊 Phase Progress Tracking
206
+
207
+ ### Current Status
208
+ - **Tasks Completed**: 0/15
209
+ - **Time Invested**: 0h of 8h estimated
210
+ - **Completion Percentage**: 0%
211
+ - **Last Updated**: 2025-01-19
212
+
213
+ ### Blockers & Issues
214
+ *No current blockers - Phase not yet started*
215
+
216
+ ### Next Actions
217
+ 1. **Immediate**: Begin with Hook Manager System implementation
218
+ 2. **Short-term**: Establish agent integration interface
219
+ 3. **Medium-term**: Implement core hook enhancements
220
+ 4. **Milestone**: Complete infrastructure foundation
221
+
222
+ ## 💬 Phase Implementation Notes
223
+
224
+ ### Implementation Decisions
225
+ *Key architectural and design decisions will be documented here as implementation progresses*
226
+
227
+ ### Lessons Learned
228
+ *Implementation insights and optimization opportunities will be captured here*
229
+
230
+ ### Phase Dependencies Resolution
231
+ *This is the foundation phase - no dependencies to resolve*
232
+ *Provides: Core infrastructure for all subsequent phases*
233
+
234
+ ### Code Structure Examples
235
+
236
+ #### Hook Manager Architecture
237
+ ```python
238
+ class HookManager:
239
+ """Central coordination system for all git hooks."""
240
+
241
+ def __init__(self, config_path: Path):
242
+ self.config = ConfigManager(config_path)
243
+ self.agent_registry = AgentRegistry()
244
+ self.task_router = TaskRouter(self.agent_registry)
245
+ self.error_handler = ErrorHandler()
246
+ self.logger = Logger()
247
+
248
+ async def execute_hook(self, hook_type: str, context: dict) -> bool:
249
+ """Execute a git hook with agent coordination."""
250
+ try:
251
+ tasks = self.task_router.route_tasks(hook_type, context)
252
+ results = await self._execute_tasks(tasks)
253
+ return self._validate_results(results)
254
+ except Exception as e:
255
+ return self.error_handler.handle_hook_error(e, hook_type)
256
+ ```
257
+
258
+ #### Agent Integration Interface
259
+ ```python
260
+ class AgentInterface:
261
+ """Standardized interface for agent communication."""
262
+
263
+ async def invoke_agent(self, agent_name: str, task: dict, timeout: int = 30) -> dict:
264
+ """Invoke an agent with timeout and error handling."""
265
+ try:
266
+ agent = self.agent_registry.get_agent(agent_name)
267
+ result = await asyncio.wait_for(
268
+ agent.execute_task(task),
269
+ timeout=timeout
270
+ )
271
+ return self._validate_agent_result(result)
272
+ except asyncio.TimeoutError:
273
+ return self._handle_timeout(agent_name, task)
274
+ except Exception as e:
275
+ return self._handle_agent_error(agent_name, e)
276
+ ```
277
+
278
+ #### Configuration Schema
279
+ ```yaml
280
+ # .claude/config/hook_config.yaml
281
+ hook_system:
282
+ version: "1.0.0"
283
+ enabled: true
284
+ performance:
285
+ max_execution_time: 30
286
+ memory_limit: 500 # MB
287
+
288
+ agents:
289
+ physics_validator:
290
+ enabled: true
291
+ timeout: 15
292
+ critical: true # Hook fails if this agent fails
293
+
294
+ test_engineer:
295
+ enabled: true
296
+ timeout: 20
297
+ critical: false
298
+
299
+ hooks:
300
+ pre_commit:
301
+ enabled: true
302
+ agents: ["physics_validator", "test_engineer"]
303
+ fast_mode: true
304
+
305
+ pre_push:
306
+ enabled: true
307
+ agents: ["physics_validator", "test_engineer", "numerical_stability_guard"]
308
+ comprehensive: true
309
+ ```
310
+
311
+ ---
312
+ *Phase 1 of 5 - SolarWindPy Integrated Hook System Enhancement - Last Updated: 2025-01-19*
313
+ *See [0-Overview.md](./0-Overview.md) for complete plan context and cross-phase coordination.*
@@ -0,0 +1,385 @@
1
+ # Phase 2: Intelligent Testing
2
+
3
+ ## Phase Metadata
4
+ - **Phase**: 2/5
5
+ - **Estimated Duration**: 4-6 hours
6
+ - **Dependencies**: Phase 1 (Core Infrastructure)
7
+ - **Status**: Not Started
8
+
9
+ ## 🎯 Phase Objective
10
+ Implement intelligent test selection and execution system that dramatically reduces test execution time while maintaining comprehensive validation. The system analyzes code changes to determine which tests are relevant, integrates with the TestEngineer agent, and provides smart caching mechanisms.
11
+
12
+ ## 🧠 Phase Context
13
+ Currently, SolarWindPy runs the complete test suite for every commit, which can be time-consuming for large codebases. This phase creates an intelligent system that:
14
+ - Analyzes code changes to identify affected modules
15
+ - Selects relevant tests based on dependency analysis
16
+ - Integrates with TestEngineer agent for test strategy
17
+ - Implements smart caching for test results
18
+ - Maintains scientific rigor while improving efficiency
19
+
20
+ Target: 60-80% reduction in test execution time without compromising validation quality.
21
+
22
+ ## 📋 Implementation Tasks
23
+
24
+ ### Task Group 1: Change Analysis Engine
25
+ - [ ] **Code Change Analyzer** (Est: 60 min) - Analyze git changes to identify affected modules
26
+ - Commit: `<checksum>`
27
+ - Status: Pending
28
+ - Files: `.claude/hooks/change_analyzer.py`
29
+ - Notes: Git diff parsing, module dependency mapping, change impact analysis
30
+
31
+ - [ ] **Dependency Graph Builder** (Est: 45 min) - Build and maintain module dependency graph
32
+ - Commit: `<checksum>`
33
+ - Status: Pending
34
+ - Files: `.claude/hooks/dependency_graph.py`
35
+ - Notes: AST parsing, import analysis, circular dependency detection
36
+
37
+ - [ ] **Impact Assessment Engine** (Est: 30 min) - Determine test scope based on code changes
38
+ - Commit: `<checksum>`
39
+ - Status: Pending
40
+ - Files: `.claude/hooks/impact_assessor.py`
41
+ - Notes: Change propagation analysis, test relevance scoring, risk assessment
42
+
43
+ ### Task Group 2: Test Selection Intelligence
44
+ - [ ] **Test Selector Engine** (Est: 75 min) - Intelligent test selection based on change analysis
45
+ - Commit: `<checksum>`
46
+ - Status: Pending
47
+ - Files: `.claude/hooks/test_selector.py`
48
+ - Notes: Test categorization, relevance algorithms, physics test prioritization
49
+
50
+ - [ ] **TestEngineer Integration** (Est: 45 min) - Seamless integration with TestEngineer agent
51
+ - Commit: `<checksum>`
52
+ - Status: Pending
53
+ - Files: `.claude/hooks/test_engineer_integration.py`
54
+ - Notes: Agent communication, test strategy consultation, validation protocols
55
+
56
+ - [ ] **Physics Test Classifier** (Est: 30 min) - Special handling for physics validation tests
57
+ - Commit: `<checksum>`
58
+ - Status: Pending
59
+ - Files: `.claude/hooks/physics_test_classifier.py`
60
+ - Notes: Physics test identification, critical test marking, validation requirements
61
+
62
+ ### Task Group 3: Smart Caching System
63
+ - [ ] **Test Result Cache** (Est: 45 min) - Cache test results with intelligent invalidation
64
+ - Commit: `<checksum>`
65
+ - Status: Pending
66
+ - Files: `.claude/hooks/test_cache.py`
67
+ - Notes: Result caching, cache invalidation, cache optimization
68
+
69
+ - [ ] **Cache Invalidation Logic** (Est: 30 min) - Smart cache invalidation based on code changes
70
+ - Commit: `<checksum>`
71
+ - Status: Pending
72
+ - Files: `.claude/hooks/cache_invalidator.py`
73
+ - Notes: Dependency-based invalidation, time-based expiry, manual cache clearing
74
+
75
+ - [ ] **Performance Metrics Tracking** (Est: 30 min) - Track test execution performance and cache efficiency
76
+ - Commit: `<checksum>`
77
+ - Status: Pending
78
+ - Files: `.claude/hooks/test_metrics.py`
79
+ - Notes: Execution time tracking, cache hit rates, efficiency analytics
80
+
81
+ ### Task Group 4: Test Execution Optimization
82
+ - [ ] **Parallel Test Executor** (Est: 45 min) - Optimize test execution with intelligent parallelization
83
+ - Commit: `<checksum>`
84
+ - Status: Pending
85
+ - Files: `.claude/hooks/parallel_executor.py`
86
+ - Notes: Test grouping, resource management, output coordination
87
+
88
+ - [ ] **Test Prioritization Engine** (Est: 30 min) - Prioritize tests based on risk and importance
89
+ - Commit: `<checksum>`
90
+ - Status: Pending
91
+ - Files: `.claude/hooks/test_prioritizer.py`
92
+ - Notes: Risk-based prioritization, physics test priority, failure history analysis
93
+
94
+ - [ ] **Resource Management** (Est: 30 min) - Optimize resource usage during test execution
95
+ - Commit: `<checksum>`
96
+ - Status: Pending
97
+ - Files: `.claude/hooks/test_resource_manager.py`
98
+ - Notes: Memory management, CPU utilization, I/O optimization
99
+
100
+ ### Task Group 5: Integration and Validation
101
+ - [ ] **Hook Integration** (Est: 45 min) - Integrate intelligent testing with existing hook system
102
+ - Commit: `<checksum>`
103
+ - Status: Pending
104
+ - Files: `.claude/hooks/intelligent_test_hook.py`
105
+ - Notes: Hook system integration, configuration management, error handling
106
+
107
+ - [ ] **Performance Validation** (Est: 30 min) - Validate performance improvements and accuracy
108
+ - Commit: `<checksum>`
109
+ - Status: Pending
110
+ - Files: `.claude/scripts/validate_test_intelligence.py`
111
+ - Notes: Performance benchmarking, accuracy validation, regression testing
112
+
113
+ - [ ] **Fallback Mechanisms** (Est: 30 min) - Fallback to full test suite when needed
114
+ - Commit: `<checksum>`
115
+ - Status: Pending
116
+ - Files: `.claude/hooks/test_fallback.py`
117
+ - Notes: Fallback triggers, full test execution, safety mechanisms
118
+
119
+ ## ✅ Phase Acceptance Criteria
120
+ - [ ] Change analysis engine accurately identifies affected modules
121
+ - [ ] Test selection reduces execution time by 60-80%
122
+ - [ ] All physics validation tests properly classified and prioritized
123
+ - [ ] TestEngineer agent integration seamless and functional
124
+ - [ ] Smart caching system operational with >90% cache hit rate
125
+ - [ ] Parallel test execution optimized for available resources
126
+ - [ ] Performance metrics tracking and reporting functional
127
+ - [ ] Fallback mechanisms tested and reliable
128
+ - [ ] Integration with Phase 1 infrastructure complete
129
+ - [ ] No loss of test coverage or validation accuracy
130
+ - [ ] Phase tests pass with >95% coverage
131
+ - [ ] Scientific workflow validation maintained
132
+
133
+ ## 🧪 Phase Testing Strategy
134
+
135
+ ### Unit Testing
136
+ - **Change Analysis**: Git diff parsing and module identification
137
+ - **Dependency Analysis**: Module dependency graph accuracy
138
+ - **Test Selection**: Test relevance algorithms and physics prioritization
139
+ - **Caching Logic**: Cache invalidation and result accuracy
140
+ - **Parallel Execution**: Resource management and output coordination
141
+
142
+ ### Integration Testing
143
+ - **End-to-End Testing**: Complete intelligent test selection workflow
144
+ - **Agent Integration**: TestEngineer agent communication and coordination
145
+ - **Hook Integration**: Integration with Phase 1 hook infrastructure
146
+ - **Performance Testing**: Test execution speed and resource usage
147
+
148
+ ### Scientific Validation
149
+ - **Physics Test Coverage**: Ensure all critical physics tests are included
150
+ - **Validation Accuracy**: No reduction in scientific validation quality
151
+ - **Research Workflow**: End-to-end research workflow with intelligent testing
152
+ - **Reproducibility**: Maintain reproducible test results
153
+
154
+ ### Performance Validation
155
+ - **Speed Improvement**: Measure 60-80% reduction in test time
156
+ - **Resource Usage**: Optimize memory and CPU utilization
157
+ - **Cache Efficiency**: >90% cache hit rate for unchanged code
158
+ - **Parallel Efficiency**: Optimal use of available CPU cores
159
+
160
+ ## 🔧 Phase Technical Requirements
161
+
162
+ ### Dependencies
163
+ - **Phase 1**: Core infrastructure and agent integration
164
+ - **ast**: Python AST parsing for dependency analysis
165
+ - **gitpython**: Git repository analysis and diff parsing
166
+ - **pytest**: Test framework integration
167
+ - **concurrent.futures**: Parallel test execution
168
+ - **hashlib**: Content hashing for caching
169
+ - **pickle**: Result serialization for caching
170
+ - **psutil**: System resource monitoring
171
+
172
+ ### Environment
173
+ - **Git Repository**: Active git repository with commit history
174
+ - **Test Suite**: Existing pytest-based test suite
175
+ - **Agent Access**: TestEngineer agent availability
176
+ - **File System**: Read/write access for cache storage
177
+ - **System Resources**: Multiple CPU cores for parallel execution
178
+
179
+ ### Constraints
180
+ - **Scientific Accuracy**: No compromise on physics validation quality
181
+ - **Test Coverage**: Maintain existing test coverage requirements
182
+ - **Reproducibility**: Ensure reproducible test results
183
+ - **Resource Limits**: Respect system resource constraints
184
+ - **Backward Compatibility**: Support existing test execution patterns
185
+
186
+ ## 📂 Phase Affected Areas
187
+
188
+ ### New Files Created
189
+ - `.claude/hooks/change_analyzer.py` - Code change analysis
190
+ - `.claude/hooks/dependency_graph.py` - Module dependency mapping
191
+ - `.claude/hooks/impact_assessor.py` - Change impact assessment
192
+ - `.claude/hooks/test_selector.py` - Intelligent test selection
193
+ - `.claude/hooks/test_engineer_integration.py` - Agent integration
194
+ - `.claude/hooks/physics_test_classifier.py` - Physics test handling
195
+ - `.claude/hooks/test_cache.py` - Test result caching
196
+ - `.claude/hooks/cache_invalidator.py` - Cache invalidation logic
197
+ - `.claude/hooks/test_metrics.py` - Performance tracking
198
+ - `.claude/hooks/parallel_executor.py` - Parallel test execution
199
+ - `.claude/hooks/test_prioritizer.py` - Test prioritization
200
+ - `.claude/hooks/test_resource_manager.py` - Resource management
201
+ - `.claude/hooks/intelligent_test_hook.py` - Hook integration
202
+ - `.claude/scripts/validate_test_intelligence.py` - Performance validation
203
+ - `.claude/hooks/test_fallback.py` - Fallback mechanisms
204
+
205
+ ### Enhanced Files
206
+ - `.claude/config/hook_config.yaml` - Add intelligent testing configuration
207
+ - `.claude/hooks/hook_manager.py` - Integrate intelligent testing
208
+ - `.claude/hooks/pre_commit_handler.py` - Add smart test selection
209
+ - `.claude/hooks/pre_push_handler.py` - Add comprehensive test validation
210
+
211
+ ### Cache and Data Files
212
+ - `.claude/cache/` - Test result cache directory
213
+ - `.claude/cache/dependency_graph.json` - Dependency graph cache
214
+ - `.claude/cache/test_results/` - Individual test result cache
215
+ - `.claude/metrics/test_performance.json` - Performance metrics
216
+
217
+ ## 📊 Phase Progress Tracking
218
+
219
+ ### Current Status
220
+ - **Tasks Completed**: 0/15
221
+ - **Time Invested**: 0h of 5h estimated
222
+ - **Completion Percentage**: 0%
223
+ - **Last Updated**: 2025-01-19
224
+
225
+ ### Performance Targets
226
+ - **Test Time Reduction**: 60-80% (target)
227
+ - **Cache Hit Rate**: >90% (target)
228
+ - **Resource Utilization**: Optimal CPU/memory usage
229
+ - **Accuracy Maintenance**: 100% validation quality preservation
230
+
231
+ ### Blockers & Issues
232
+ - **Dependency**: Requires Phase 1 completion
233
+ - **Agent Access**: Needs TestEngineer agent integration
234
+
235
+ ### Next Actions
236
+ 1. **Prerequisites**: Complete Phase 1 infrastructure
237
+ 2. **Immediate**: Begin change analysis engine implementation
238
+ 3. **Short-term**: Develop test selection algorithms
239
+ 4. **Medium-term**: Implement caching and parallel execution
240
+ 5. **Validation**: Performance testing and optimization
241
+
242
+ ## 💬 Phase Implementation Notes
243
+
244
+ ### Implementation Decisions
245
+ *Architectural decisions for intelligent testing will be documented here*
246
+
247
+ ### Performance Optimization Strategies
248
+ - **Incremental Analysis**: Only analyze changed files
249
+ - **Dependency Caching**: Cache module dependency graphs
250
+ - **Result Memoization**: Cache test results with smart invalidation
251
+ - **Parallel Execution**: Optimize test execution across CPU cores
252
+ - **Resource Pooling**: Efficient resource management
253
+
254
+ ### Scientific Validation Preservation
255
+ - **Physics Test Priority**: Always run critical physics validation tests
256
+ - **Validation Completeness**: Ensure no reduction in scientific rigor
257
+ - **Reproducible Results**: Maintain deterministic test outcomes
258
+ - **Research Workflow**: Support existing scientific computing patterns
259
+
260
+ ### Code Structure Examples
261
+
262
+ #### Change Analysis Engine
263
+ ```python
264
+ class ChangeAnalyzer:
265
+ """Analyze git changes to identify affected modules."""
266
+
267
+ def __init__(self, repo_path: Path):
268
+ self.repo = git.Repo(repo_path)
269
+ self.dependency_graph = DependencyGraph()
270
+
271
+ def analyze_changes(self, commit_range: str = "HEAD~1..HEAD") -> Set[str]:
272
+ """Analyze git changes and return affected modules."""
273
+ diff = self.repo.git.diff(commit_range, name_only=True)
274
+ changed_files = diff.strip().split('\n') if diff else []
275
+
276
+ affected_modules = set()
277
+ for file_path in changed_files:
278
+ if file_path.endswith('.py'):
279
+ module = self._file_to_module(file_path)
280
+ affected_modules.add(module)
281
+ # Add dependent modules
282
+ affected_modules.update(
283
+ self.dependency_graph.get_dependents(module)
284
+ )
285
+
286
+ return affected_modules
287
+ ```
288
+
289
+ #### Test Selection Engine
290
+ ```python
291
+ class TestSelector:
292
+ """Intelligent test selection based on code changes."""
293
+
294
+ def __init__(self, config: dict):
295
+ self.config = config
296
+ self.physics_classifier = PhysicsTestClassifier()
297
+ self.test_cache = TestCache()
298
+
299
+ async def select_tests(self, affected_modules: Set[str]) -> List[str]:
300
+ """Select relevant tests based on affected modules."""
301
+ all_tests = self._discover_tests()
302
+ relevant_tests = set()
303
+
304
+ for test in all_tests:
305
+ # Always include physics validation tests
306
+ if self.physics_classifier.is_physics_test(test):
307
+ relevant_tests.add(test)
308
+ continue
309
+
310
+ # Check if test is affected by changes
311
+ test_modules = self._get_test_modules(test)
312
+ if affected_modules.intersection(test_modules):
313
+ relevant_tests.add(test)
314
+
315
+ # Consult TestEngineer agent for strategy
316
+ agent_recommendations = await self._consult_test_engineer(
317
+ affected_modules, list(relevant_tests)
318
+ )
319
+
320
+ return self._merge_recommendations(relevant_tests, agent_recommendations)
321
+ ```
322
+
323
+ #### Smart Caching System
324
+ ```python
325
+ class TestCache:
326
+ """Smart caching system for test results."""
327
+
328
+ def __init__(self, cache_dir: Path):
329
+ self.cache_dir = cache_dir
330
+ self.cache_dir.mkdir(exist_ok=True)
331
+
332
+ def get_cached_result(self, test_id: str, content_hash: str) -> Optional[dict]:
333
+ """Get cached test result if valid."""
334
+ cache_file = self.cache_dir / f"{test_id}.json"
335
+ if cache_file.exists():
336
+ with open(cache_file, 'r') as f:
337
+ cached_data = json.load(f)
338
+
339
+ if cached_data.get('content_hash') == content_hash:
340
+ if self._is_cache_valid(cached_data):
341
+ return cached_data['result']
342
+
343
+ return None
344
+
345
+ def cache_result(self, test_id: str, content_hash: str, result: dict):
346
+ """Cache test result with metadata."""
347
+ cache_data = {
348
+ 'test_id': test_id,
349
+ 'content_hash': content_hash,
350
+ 'timestamp': time.time(),
351
+ 'result': result
352
+ }
353
+
354
+ cache_file = self.cache_dir / f"{test_id}.json"
355
+ with open(cache_file, 'w') as f:
356
+ json.dump(cache_data, f, indent=2)
357
+ ```
358
+
359
+ #### Configuration Enhancement
360
+ ```yaml
361
+ # Addition to .claude/config/hook_config.yaml
362
+ intelligent_testing:
363
+ enabled: true
364
+ cache_enabled: true
365
+ cache_ttl: 86400 # 24 hours
366
+
367
+ performance:
368
+ max_parallel_tests: 4
369
+ memory_limit_per_test: 128 # MB
370
+ timeout_per_test: 300 # seconds
371
+
372
+ selection:
373
+ min_test_reduction: 0.6 # 60% minimum reduction
374
+ physics_test_priority: true
375
+ fallback_threshold: 0.1 # Fall back if <10% tests selected
376
+
377
+ cache:
378
+ max_cache_size: 1024 # MB
379
+ cleanup_frequency: 7 # days
380
+ invalidation_strategy: "dependency"
381
+ ```
382
+
383
+ ---
384
+ *Phase 2 of 5 - SolarWindPy Integrated Hook System Enhancement - Last Updated: 2025-01-19*
385
+ *See [0-Overview.md](./0-Overview.md) for complete plan context and cross-phase coordination.*