solarwindpy 0.0.1.dev0__py3-none-any.whl → 0.1.0__py3-none-any.whl

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  1. plans/.velocity/metrics.json +96 -0
  2. plans/0-overview-template.md +268 -0
  3. plans/N-phase-template.md +106 -0
  4. plans/PLAN_AUDIT_SUMMARY.md +173 -0
  5. plans/TEMPLATE-USAGE-GUIDE.md +198 -0
  6. plans/__init__.py +1 -0
  7. plans/abandoned/compaction-agent-system/0-Overview.md +123 -0
  8. plans/abandoned/compaction-agent-system/agents-index-update-plan.md +109 -0
  9. plans/abandoned/compaction-agent-system/compacted_state.md +85 -0
  10. plans/abandoned/compaction-agent-system/implementation-plan.md +107 -0
  11. plans/abandoned/compaction-agent-system/system-validation-report.md +159 -0
  12. plans/abandoned/compaction-agent-system/usage-guide.md +210 -0
  13. plans/abandoned/hook-system-enhancement/0-Overview.md +214 -0
  14. plans/abandoned/hook-system-enhancement/1-Phase1-Core-Infrastructure.md +313 -0
  15. plans/abandoned/hook-system-enhancement/2-Phase2-Intelligent-Testing.md +385 -0
  16. plans/abandoned/hook-system-enhancement/3-Phase3-Physics-Validation.md +444 -0
  17. plans/abandoned/hook-system-enhancement/4-Phase4-Performance-Monitoring.md +458 -0
  18. plans/abandoned/hook-system-enhancement/5-Phase5-Developer-Experience.md +532 -0
  19. plans/abandoned/hook-system-enhancement/6-Implementation-Timeline.md +274 -0
  20. plans/abandoned/hook-system-enhancement/7-Risk-Management.md +376 -0
  21. plans/abandoned/hook-system-enhancement/8-Testing-Strategy.md +579 -0
  22. plans/abandoned/readthedocs-automation/0-Overview.md +247 -0
  23. plans/abandoned/readthedocs-automation/1-Emergency-Documentation-Fixes.md +270 -0
  24. plans/abandoned/readthedocs-automation/2-Template-System-Enhancement.md +811 -0
  25. plans/abandoned/readthedocs-automation/3-Quality-Audit-ReadTheDocs-Integration.md +844 -0
  26. plans/abandoned/readthedocs-automation/4-Plan-Consolidation-Cleanup.md +632 -0
  27. plans/abandoned/readthedocs-automation/9-Closeout.md +207 -0
  28. plans/abandoned/readthedocs-automation/ABANDONMENT_REASON.md +72 -0
  29. plans/cicd-architecture-redesign/0-Overview.md +193 -0
  30. plans/cicd-architecture-redesign/1-Workflow-Creation.md +103 -0
  31. plans/cicd-architecture-redesign/2-Version-Detection.md +123 -0
  32. plans/cicd-architecture-redesign/3-Deployment-Gates.md +169 -0
  33. plans/cicd-architecture-redesign/4-RC-Testing.md +194 -0
  34. plans/cicd-architecture-redesign/5-TestPyPI-Validation.md +264 -0
  35. plans/cicd-architecture-redesign/6-Production-Release.md +263 -0
  36. plans/cicd-architecture-redesign/7-Cleanup.md +243 -0
  37. plans/cicd-architecture-redesign/8-Documentation.md +285 -0
  38. plans/cicd-architecture-redesign/Closeout.md +225 -0
  39. plans/closeout-template.md +259 -0
  40. plans/completed/circular-import-audit/0-Overview.md +152 -0
  41. plans/completed/circular-import-audit/1-Static-Dependency-Analysis.md +62 -0
  42. plans/completed/circular-import-audit/2-Dynamic-Import-Testing.md +56 -0
  43. plans/completed/circular-import-audit/3-Performance-Impact-Assessment.md +56 -0
  44. plans/completed/circular-import-audit/4-Issue-Remediation.md +78 -0
  45. plans/completed/circular-import-audit/5-Preventive-Infrastructure.md +89 -0
  46. plans/completed/claude-settings-ecosystem-alignment/0-Overview.md +162 -0
  47. plans/completed/claude-settings-ecosystem-alignment/1-Security-Foundation.md +148 -0
  48. plans/completed/claude-settings-ecosystem-alignment/2-Hook-Integration.md +158 -0
  49. plans/completed/claude-settings-ecosystem-alignment/3-Agent-System-Integration.md +177 -0
  50. plans/completed/claude-settings-ecosystem-alignment/4-Enhanced-Workflow-Automation.md +159 -0
  51. plans/completed/claude-settings-ecosystem-alignment/5-Validation-Monitoring.md +181 -0
  52. plans/completed/claude-settings-ecosystem-alignment/compacted_session_state.md +290 -0
  53. plans/completed/combined_plan_with_checklist_documentation/1-Overview-and-Goals.md +51 -0
  54. plans/completed/combined_plan_with_checklist_documentation/2-Toolchain-and-Hosting.md +69 -0
  55. plans/completed/combined_plan_with_checklist_documentation/3-Repository-Structure.md +61 -0
  56. plans/completed/combined_plan_with_checklist_documentation/4-Configuration-and-Standards.md +70 -0
  57. plans/completed/combined_plan_with_checklist_documentation/5-Documentation-Content.md +62 -0
  58. plans/completed/combined_plan_with_checklist_documentation/6-CI-CD-and-Validation.md +58 -0
  59. plans/completed/combined_plan_with_checklist_documentation/7-Maintenance.md +55 -0
  60. plans/completed/combined_test_plan_with_checklist_fitfunctions/0-Overview.md +135 -0
  61. plans/completed/combined_test_plan_with_checklist_fitfunctions/1-Common-fixtures.md +59 -0
  62. plans/completed/combined_test_plan_with_checklist_fitfunctions/10-power_laws.md +56 -0
  63. plans/completed/combined_test_plan_with_checklist_fitfunctions/2-core.py-FitFunction.md +118 -0
  64. plans/completed/combined_test_plan_with_checklist_fitfunctions/3-gaussians.py-Gaussian-GaussianNormalized-GaussianLn.md +69 -0
  65. plans/completed/combined_test_plan_with_checklist_fitfunctions/4-trend_fits.py-TrendFit.md +99 -0
  66. plans/completed/combined_test_plan_with_checklist_fitfunctions/5-plots.py-FFPlot.md +98 -0
  67. plans/completed/combined_test_plan_with_checklist_fitfunctions/6-tex_info.py-TeXinfo.md +79 -0
  68. plans/completed/combined_test_plan_with_checklist_fitfunctions/7-Justification.md +49 -0
  69. plans/completed/combined_test_plan_with_checklist_fitfunctions/8-exponentials.md +64 -0
  70. plans/completed/combined_test_plan_with_checklist_fitfunctions/9-lines.md +58 -0
  71. plans/completed/combined_test_plan_with_checklist_plotting/0-Overview.md +142 -0
  72. plans/completed/combined_test_plan_with_checklist_plotting/1-base.py.md +90 -0
  73. plans/completed/combined_test_plan_with_checklist_plotting/10-labels-special.py.md +102 -0
  74. plans/completed/combined_test_plan_with_checklist_plotting/11-labels-chemistry.py.md +212 -0
  75. plans/completed/combined_test_plan_with_checklist_plotting/12-labels-composition.py.md +242 -0
  76. plans/completed/combined_test_plan_with_checklist_plotting/13-labels-datetime.py.md +247 -0
  77. plans/completed/combined_test_plan_with_checklist_plotting/14-labels-elemental_abundance.py.md +274 -0
  78. plans/completed/combined_test_plan_with_checklist_plotting/15-visual-validation.md +256 -0
  79. plans/completed/combined_test_plan_with_checklist_plotting/16-integration-testing.md +266 -0
  80. plans/completed/combined_test_plan_with_checklist_plotting/17-performance-benchmarks.md +267 -0
  81. plans/completed/combined_test_plan_with_checklist_plotting/18-Fixtures-and-Utilities.md +86 -0
  82. plans/completed/combined_test_plan_with_checklist_plotting/2-agg_plot.py.md +90 -0
  83. plans/completed/combined_test_plan_with_checklist_plotting/3-histograms.py.md +201 -0
  84. plans/completed/combined_test_plan_with_checklist_plotting/4-scatter.py.md +167 -0
  85. plans/completed/combined_test_plan_with_checklist_plotting/5-spiral.py.md +216 -0
  86. plans/completed/combined_test_plan_with_checklist_plotting/6-orbits.py.md +108 -0
  87. plans/completed/combined_test_plan_with_checklist_plotting/7-tools.py.md +86 -0
  88. plans/completed/combined_test_plan_with_checklist_plotting/8-select_data_from_figure.py.md +97 -0
  89. plans/completed/combined_test_plan_with_checklist_plotting/9-labels-base.py.md +88 -0
  90. plans/completed/combined_test_plan_with_checklist_solar_activity/.gitkeep +0 -0
  91. plans/completed/combined_test_plan_with_checklist_solar_activity/0-Overview.md +170 -0
  92. plans/completed/combined_test_plan_with_checklist_solar_activity/1-Package-Entry-Point-__init__.py.md +121 -0
  93. plans/completed/combined_test_plan_with_checklist_solar_activity/2-Core-Base-Classes-base.py.md +142 -0
  94. plans/completed/combined_test_plan_with_checklist_solar_activity/3-Plotting-Helpers-plots.py.md +123 -0
  95. plans/completed/combined_test_plan_with_checklist_solar_activity/4-LISIRD-Sub-package.md +119 -0
  96. plans/completed/combined_test_plan_with_checklist_solar_activity/5-Extrema-Calculator.md +103 -0
  97. plans/completed/combined_test_plan_with_checklist_solar_activity/6-Sunspot-Number-Sub-package.md +163 -0
  98. plans/completed/combined_test_plan_with_checklist_solar_activity/7-Sunspot-Number-Init.py.md +217 -0
  99. plans/completed/combined_test_plan_with_checklist_solar_activity/compacted_state.md +52 -0
  100. plans/completed/compaction-agent-modernization/0-Overview.md +156 -0
  101. plans/completed/compaction-agent-modernization/1-Architecture-Audit-Gap-Analysis.md +132 -0
  102. plans/completed/compaction-agent-modernization/2-Token-Baseline-Recalibration.md +153 -0
  103. plans/completed/compaction-agent-modernization/3-Agent-Reference-Updates.md +184 -0
  104. plans/completed/compaction-agent-modernization/4-Compression-Algorithm-Modernization.md +238 -0
  105. plans/completed/compaction-agent-modernization/5-Workflow-Integration-Streamlining.md +252 -0
  106. plans/completed/compaction-agent-modernization/6-Template-Structure-Optimization.md +240 -0
  107. plans/completed/compaction-agent-modernization/7-Integration-Testing-Validation.md +292 -0
  108. plans/completed/compaction-hook-enhancement/0-Overview.md +150 -0
  109. plans/completed/compaction-hook-enhancement/1-Token-Estimation-Enhancement.md +179 -0
  110. plans/completed/compaction-hook-enhancement/2-Compression-Intelligence.md +294 -0
  111. plans/completed/compaction-hook-enhancement/3-Git-Integration-Metadata.md +310 -0
  112. plans/completed/compaction-hook-enhancement/4-Session-Continuity-Features.md +358 -0
  113. plans/completed/compaction-hook-enhancement/5-Testing-Strategy.md +404 -0
  114. plans/completed/compaction-hook-enhancement/6-Integration-Roadmap.md +319 -0
  115. plans/completed/compaction-hook-enhancement/compacted_state.md +142 -0
  116. plans/completed/docstring-audit-enhancement/0-Overview.md +274 -0
  117. plans/completed/docstring-audit-enhancement/1-Infrastructure-Setup-and-Validation-Tools.md +206 -0
  118. plans/completed/docstring-audit-enhancement/2-Core-Physics-Modules-Enhancement.md +237 -0
  119. plans/completed/docstring-audit-enhancement/3-Fitfunctions-Mathematical-Modules-Enhancement.md +188 -0
  120. plans/completed/docstring-audit-enhancement/4-Plotting-Visualization-Modules-Enhancement.md +243 -0
  121. plans/completed/docstring-audit-enhancement/5-Specialized-Modules-Enhancement.md +216 -0
  122. plans/completed/docstring-audit-enhancement/6-Validation-and-Integration.md +216 -0
  123. plans/completed/fitfunctions-testing-implementation/0-Overview.md +130 -0
  124. plans/completed/fitfunctions-testing-implementation/1-Test-Infrastructure-Setup.md +79 -0
  125. plans/completed/fitfunctions-testing-implementation/2-Common-Fixtures-Test-Utilities.md +104 -0
  126. plans/completed/fitfunctions-testing-implementation/3-Core-FitFunction-Testing.md +168 -0
  127. plans/completed/fitfunctions-testing-implementation/4-Specialized-Function-Classes.md +210 -0
  128. plans/completed/fitfunctions-testing-implementation/5-Advanced-Classes-Testing.md +214 -0
  129. plans/completed/fitfunctions-testing-implementation/6-Plotting-Integration-Testing.md +231 -0
  130. plans/completed/fitfunctions-testing-implementation/7-Extended-Coverage-BONUS.md +184 -0
  131. plans/completed/numpy-docstring-conversion-plan/numpy-docstring-conversion-plan.md +118 -0
  132. plans/completed/pr-review-remediation/0-Overview.md +138 -0
  133. plans/completed/pr-review-remediation/1-Critical-Safety-Improvements.md +179 -0
  134. plans/completed/pr-review-remediation/2-Smart-Timeouts-Validation.md +399 -0
  135. plans/completed/pr-review-remediation/3-Enhanced-GitHub-Integration.md +258 -0
  136. plans/completed/pr-review-remediation/compacted_state.md +66 -0
  137. plans/completed/python-310-migration/0-Overview.md +390 -0
  138. plans/completed/python-310-migration/1-Planning-Setup.md +164 -0
  139. plans/completed/python-310-migration/2-Implementation.md +256 -0
  140. plans/completed/python-310-migration/3-Testing-Validation.md +335 -0
  141. plans/completed/python-310-migration/4-Documentation-Release.md +274 -0
  142. plans/completed/python-310-migration/5-Closeout.md +252 -0
  143. plans/completed/requirements-management-consolidation/0-Overview.md +118 -0
  144. plans/completed/requirements-management-consolidation/1-Documentation-Validation-Environment-Setup.md +116 -0
  145. plans/completed/requirements-management-consolidation/2-Requirements-Consolidation.md +161 -0
  146. plans/completed/requirements-management-consolidation/3-Workflow-Automation-Final-Integration.md +196 -0
  147. plans/completed/single-ecosystem-plan-implementation/0-Overview.md +83 -0
  148. plans/completed/single-ecosystem-plan-implementation/1-Plan-Preservation-Session-Management.md +38 -0
  149. plans/completed/single-ecosystem-plan-implementation/2-File-Structure-Optimization.md +43 -0
  150. plans/completed/single-ecosystem-plan-implementation/3-Plan-Migration-Archive-Setup.md +82 -0
  151. plans/completed/single-ecosystem-plan-implementation/4-Agent-System-Transformation.md +108 -0
  152. plans/completed/single-ecosystem-plan-implementation/5-Template-System-Enhancement.md +131 -0
  153. plans/completed/single-ecosystem-plan-implementation/6-Final-Validation-Testing.md +120 -0
  154. plans/completed/test-directory-consolidation/0-Overview.md +51 -0
  155. plans/completed/test-directory-consolidation/1-Structure-Preparation.md +82 -0
  156. plans/completed/test-directory-consolidation/2-File-Migration.md +100 -0
  157. plans/completed/test-directory-consolidation/3-Import-Transformation.md +117 -0
  158. plans/completed/test-directory-consolidation/4-Configuration-Consolidation.md +140 -0
  159. plans/completed/test-directory-consolidation/5-Validation.md +152 -0
  160. plans/completed/test-directory-consolidation/6-Cleanup.md +156 -0
  161. plans/completed/test-planning-agents-architecture/0-Overview.md +79 -0
  162. plans/completed/test-planning-agents-architecture/1-Branch-Isolation-Testing.md +49 -0
  163. plans/completed/test-planning-agents-architecture/2-Cross-Branch-Coordination.md +51 -0
  164. plans/completed/test-planning-agents-architecture/3-Merge-Workflow-Testing.md +48 -0
  165. plans/deployment-semver-pypi-rtd/0-Overview.md +463 -0
  166. plans/deployment-semver-pypi-rtd/1-Semantic-Versioning-Foundation.md +136 -0
  167. plans/deployment-semver-pypi-rtd/2-PyPI-Deployment-Infrastructure.md +168 -0
  168. plans/deployment-semver-pypi-rtd/3-Release-Automation.md +214 -0
  169. plans/deployment-semver-pypi-rtd/4-Plan-Closeout.md +543 -0
  170. plans/deployment-semver-pypi-rtd/compacted_session_state.md +172 -0
  171. plans/deployment-semver-pypi-rtd/compacted_state.md +131 -0
  172. plans/documentation-code-audit/0-Overview.md +393 -0
  173. plans/documentation-code-audit/1-Discovery-Inventory.md +183 -0
  174. plans/documentation-code-audit/2-Execution-Environment-Setup.md +263 -0
  175. plans/documentation-code-audit/3-Systematic-Validation.md +322 -0
  176. plans/documentation-code-audit/4-Code-Example-Remediation.md +358 -0
  177. plans/documentation-code-audit/5-Physics-MultiIndex-Compliance.md +464 -0
  178. plans/documentation-code-audit/6-Doctest-Integration.md +523 -0
  179. plans/documentation-code-audit/7-Reporting-Documentation.md +498 -0
  180. plans/documentation-code-audit/8-Closeout.md +456 -0
  181. plans/documentation-rebuild-session/compacted_state.md +109 -0
  182. plans/documentation-rendering-fixes/0-Overview.md +104 -0
  183. plans/documentation-rendering-fixes/1-Sphinx-Build-Diagnostics-Warning-Audit.md +101 -0
  184. plans/documentation-rendering-fixes/2-Configuration-Infrastructure-Fixes.md +113 -0
  185. plans/documentation-rendering-fixes/3-Docstring-Syntax-Audit-Repair.md +131 -0
  186. plans/documentation-rendering-fixes/4-HTML-Page-Rendering-Verification.md +113 -0
  187. plans/documentation-rendering-fixes/5-Advanced-Documentation-Quality-Assurance.md +119 -0
  188. plans/documentation-rendering-fixes/6-Documentation-Build-Optimization-Testing.md +129 -0
  189. plans/documentation-rendering-fixes/compacted_state.md +132 -0
  190. plans/documentation-template-fix/0-Overview.md +197 -0
  191. plans/documentation-template-fix/1-Template-System-Analysis.md +269 -0
  192. plans/documentation-template-fix/2-Template-Modification.md +609 -0
  193. plans/documentation-template-fix/3-Build-System-Integration.md +766 -0
  194. plans/documentation-template-fix/4-Testing-Validation.md +1399 -0
  195. plans/documentation-template-fix/5-Documentation-Training.md +602 -0
  196. plans/documentation-workflow-fix/0-Overview.md +222 -0
  197. plans/documentation-workflow-fix/1-Immediate-Fixes.md +238 -0
  198. plans/documentation-workflow-fix/2-Configuration-Setup.md +298 -0
  199. plans/documentation-workflow-fix/3-Pre-commit-Integration.md +382 -0
  200. plans/documentation-workflow-fix/4-Workflow-Improvements.md +446 -0
  201. plans/documentation-workflow-fix/5-Documentation-and-Training.md +527 -0
  202. plans/duplicate-object-warnings-fix-plan.md +130 -0
  203. plans/github-issues-migration/0-Overview.md +510 -0
  204. plans/github-issues-migration/1-Foundation-Label-System.md +180 -0
  205. plans/github-issues-migration/2-Migration-Tool-Rewrite.md +235 -0
  206. plans/github-issues-migration/3-CLI-Integration-Automation.md +169 -0
  207. plans/github-issues-migration/4-Validated-Migration.md +252 -0
  208. plans/github-issues-migration/5-Documentation-Training.md +171 -0
  209. plans/github-issues-migration/6-Closeout.md +179 -0
  210. plans/github-workflows-repair/repair-plan.md +299 -0
  211. plans/issues_from_plans.py +342 -0
  212. plans/pr-270-doc-validation-fixes/0-Overview.md +354 -0
  213. plans/pr-270-doc-validation-fixes/1-Critical-PR-Fixes.md +117 -0
  214. plans/pr-270-doc-validation-fixes/2-Framework-Right-Sizing.md +129 -0
  215. plans/pr-270-doc-validation-fixes/3-Sustainable-Documentation.md +126 -0
  216. plans/pr-270-doc-validation-fixes/4-Closeout-Migration.md +143 -0
  217. plans/pr-270-doc-validation-fixes/PLAN_COMPLETED.md +149 -0
  218. plans/python-310-migration/0-Overview.md +390 -0
  219. plans/python-310-migration/1-Planning-Setup.md +164 -0
  220. plans/python-310-migration/2-Implementation.md +256 -0
  221. plans/python-310-migration/3-Testing-Validation.md +335 -0
  222. plans/python-310-migration/4-Documentation-Release.md +274 -0
  223. plans/python-310-migration/5-Closeout.md +252 -0
  224. plans/readthedocs-simplified/0-Overview.md +243 -0
  225. plans/readthedocs-simplified/1-Immediate-Fixes.md +216 -0
  226. plans/readthedocs-simplified/2-Template-Simplification.md +278 -0
  227. plans/readthedocs-simplified/3-ReadTheDocs-Setup.md +298 -0
  228. plans/readthedocs-simplified/4-Testing-Validation.md +328 -0
  229. plans/readthedocs-simplified/5-Closeout.md +231 -0
  230. plans/readthedocs-simplified/compacted_state.md +127 -0
  231. plans/session-compaction-2025-08-12/compacted_state.md +114 -0
  232. plans/session-compaction-2025-08-13/compacted_state.md +145 -0
  233. plans/session-continuity-protocol/0-Overview.md +35 -0
  234. plans/session-continuity-protocol/1-Core-Principles-Framework.md +40 -0
  235. plans/session-continuity-protocol/2-Pre-Session-Validation-System.md +79 -0
  236. plans/session-continuity-protocol/3-Context-Switching-Prevention.md +87 -0
  237. plans/session-continuity-protocol/4-Progress-Tracking-Recovery.md +100 -0
  238. plans/sphinx-warnings-analysis.md +222 -0
  239. plans/systemprompt-optimization/0-Overview.md +447 -0
  240. plans/systemprompt-optimization/1-Deploy-SystemPrompt.md +114 -0
  241. plans/systemprompt-optimization/2-Documentation-Alignment.md +198 -0
  242. plans/systemprompt-optimization/3-Monitoring-Infrastructure.md +396 -0
  243. plans/systemprompt-optimization/4-Implementation-Script.md +450 -0
  244. plans/systemprompt-optimization/9-Closeout.md +165 -0
  245. plans/systemprompt-optimization/compacted_state.md +143 -0
  246. plans/template-value-propositions/0-Overview.md +357 -0
  247. plans/template-value-propositions/1-Value-Proposition-Framework-Design.md +144 -0
  248. plans/template-value-propositions/2-Plan-Template-Enhancement.md +178 -0
  249. plans/template-value-propositions/3-Value-Generator-Hook-Implementation.md +291 -0
  250. plans/template-value-propositions/4-Value-Validator-Hook-Implementation.md +274 -0
  251. plans/template-value-propositions/5-Documentation-Agent-Updates.md +219 -0
  252. plans/template-value-propositions/6-Integration-Testing-Validation.md +247 -0
  253. plans/tests-audit/0-Overview.md +410 -0
  254. plans/tests-audit/1-Discovery-Inventory.md +170 -0
  255. plans/tests-audit/2-Physics-Validation-Audit.md +195 -0
  256. plans/tests-audit/3-Architecture-Compliance.md +195 -0
  257. plans/tests-audit/4-Numerical-Stability-Analysis.md +203 -0
  258. plans/tests-audit/5-Documentation-Enhancement.md +220 -0
  259. plans/tests-audit/6-Audit-Deliverables.md +220 -0
  260. plans/tests-audit/7-Closeout.md +252 -0
  261. plans/tests-audit/artifacts/ARCHITECTURE_COMPLIANCE_REPORT.md +315 -0
  262. plans/tests-audit/artifacts/ARCHITECTURE_RECOMMENDATIONS.md +943 -0
  263. plans/tests-audit/artifacts/COMPREHENSIVE_AUDIT_REPORT.md +356 -0
  264. plans/tests-audit/artifacts/CONTRIBUTING_ENHANCED_TEMPLATE.md +419 -0
  265. plans/tests-audit/artifacts/COVERAGE_GAP_ANALYSIS.md +152 -0
  266. plans/tests-audit/artifacts/DOCUMENTATION_ENHANCEMENT_REPORT.md +502 -0
  267. plans/tests-audit/artifacts/EXECUTIVE_AUDIT_SUMMARY.md +129 -0
  268. plans/tests-audit/artifacts/IMPLEMENTATION_ROADMAP.md +647 -0
  269. plans/tests-audit/artifacts/NUMERICAL_RECOMMENDATIONS.md +739 -0
  270. plans/tests-audit/artifacts/NUMERICAL_STABILITY_GUIDE_TEMPLATE.rst +451 -0
  271. plans/tests-audit/artifacts/NUMERICAL_STABILITY_REPORT.md +301 -0
  272. plans/tests-audit/artifacts/PHASE_3_SUMMARY.md +280 -0
  273. plans/tests-audit/artifacts/PHASE_4_SUMMARY.md +229 -0
  274. plans/tests-audit/artifacts/PHASE_5_SUMMARY.md +292 -0
  275. plans/tests-audit/artifacts/PHASE_6_CLOSEOUT.md +278 -0
  276. plans/tests-audit/artifacts/PHYSICS_GUIDE_TEMPLATE.rst +268 -0
  277. plans/tests-audit/artifacts/PHYSICS_VALIDATION_REPORT.md +235 -0
  278. plans/tests-audit/artifacts/TECHNICAL_DELIVERABLES_PACKAGE.md +2502 -0
  279. plans/tests-audit/artifacts/TEST_INVENTORY.csv +1204 -0
  280. plans/tests-audit/artifacts/TEST_INVENTORY.md +135 -0
  281. plans/tests-audit/artifacts/test_discovery_analysis.py +231 -0
  282. plans/tests-audit/artifacts/test_parser.py +395 -0
  283. solarwindpy/README.md +3 -0
  284. solarwindpy/Untitled.ipynb +54 -0
  285. solarwindpy/__init__.py +74 -0
  286. solarwindpy/core/__init__.py +23 -0
  287. solarwindpy/core/alfvenic_turbulence.py +804 -0
  288. solarwindpy/core/base.py +267 -0
  289. solarwindpy/core/ions.py +309 -0
  290. solarwindpy/core/plasma.py +2133 -0
  291. solarwindpy/core/spacecraft.py +256 -0
  292. solarwindpy/core/tensor.py +90 -0
  293. solarwindpy/core/units_constants.py +199 -0
  294. solarwindpy/core/vector.py +328 -0
  295. solarwindpy/fitfunctions/__init__.py +20 -0
  296. solarwindpy/fitfunctions/core.py +734 -0
  297. solarwindpy/fitfunctions/exponentials.py +188 -0
  298. solarwindpy/fitfunctions/gaussians.py +264 -0
  299. solarwindpy/fitfunctions/lines.py +116 -0
  300. solarwindpy/fitfunctions/moyal.py +71 -0
  301. solarwindpy/fitfunctions/plots.py +751 -0
  302. solarwindpy/fitfunctions/power_laws.py +209 -0
  303. solarwindpy/fitfunctions/tex_info.py +568 -0
  304. solarwindpy/fitfunctions/trend_fits.py +482 -0
  305. solarwindpy/instabilities/__init__.py +16 -0
  306. solarwindpy/instabilities/beta_ani.py +82 -0
  307. solarwindpy/instabilities/verscharen2016.py +631 -0
  308. solarwindpy/plotting/__init__.py +33 -0
  309. solarwindpy/plotting/agg_plot.py +489 -0
  310. solarwindpy/plotting/base.py +465 -0
  311. solarwindpy/plotting/hist1d.py +405 -0
  312. solarwindpy/plotting/hist2d.py +1035 -0
  313. solarwindpy/plotting/histograms.py +1845 -0
  314. solarwindpy/plotting/labels/__init__.py +104 -0
  315. solarwindpy/plotting/labels/base.py +686 -0
  316. solarwindpy/plotting/labels/chemistry.py +19 -0
  317. solarwindpy/plotting/labels/composition.py +100 -0
  318. solarwindpy/plotting/labels/datetime.py +235 -0
  319. solarwindpy/plotting/labels/elemental_abundance.py +73 -0
  320. solarwindpy/plotting/labels/special.py +794 -0
  321. solarwindpy/plotting/orbits.py +515 -0
  322. solarwindpy/plotting/scatter.py +99 -0
  323. solarwindpy/plotting/select_data_from_figure.py +329 -0
  324. solarwindpy/plotting/spiral.py +980 -0
  325. solarwindpy/plotting/tools.py +434 -0
  326. solarwindpy/scripts/__init__.py +1 -0
  327. solarwindpy/scripts/logs/.gitignore +1 -0
  328. solarwindpy/solar_activity/__init__.py +53 -0
  329. solarwindpy/solar_activity/base.py +605 -0
  330. solarwindpy/solar_activity/lisird/__init__.py +3 -0
  331. solarwindpy/solar_activity/lisird/extrema_calculator.py +394 -0
  332. solarwindpy/solar_activity/lisird/lisird.py +319 -0
  333. solarwindpy/solar_activity/plots.py +116 -0
  334. solarwindpy/solar_activity/sunspot_number/.DS_Store +0 -0
  335. solarwindpy/solar_activity/sunspot_number/__init__.py +3 -0
  336. solarwindpy/solar_activity/sunspot_number/sidc.py +556 -0
  337. solarwindpy/solar_activity/sunspot_number/ssn_extrema.csv +72 -0
  338. solarwindpy/solar_activity/sunspot_number/ssn_extrema.csv.silso +72 -0
  339. solarwindpy/tools/__init__.py +162 -0
  340. solarwindpy-0.1.0.dist-info/METADATA +181 -0
  341. solarwindpy-0.1.0.dist-info/RECORD +409 -0
  342. {solarwindpy-0.0.1.dev0.dist-info → solarwindpy-0.1.0.dist-info}/WHEEL +1 -1
  343. solarwindpy-0.1.0.dist-info/licenses/LICENSE.rst +32 -0
  344. solarwindpy-0.1.0.dist-info/top_level.txt +3 -0
  345. tests/__init__.py +1 -0
  346. tests/conftest.py +10 -0
  347. tests/core/__init__.py +1 -0
  348. tests/core/test_alfvenic_turbulence.py +544 -0
  349. tests/core/test_base.py +112 -0
  350. tests/core/test_base_head_tail.py +29 -0
  351. tests/core/test_base_mi_tuples.py +11 -0
  352. tests/core/test_core_verify_datetimeindex.py +32 -0
  353. tests/core/test_ions.py +325 -0
  354. tests/core/test_plasma.py +2581 -0
  355. tests/core/test_plasma_io.py +12 -0
  356. tests/core/test_quantities.py +507 -0
  357. tests/core/test_spacecraft.py +210 -0
  358. tests/core/test_units_constants.py +22 -0
  359. tests/data/epoch.csv +4 -0
  360. tests/data/plasma.csv +4 -0
  361. tests/data/spacecraft.csv +4 -0
  362. tests/fitfunctions/conftest.py +60 -0
  363. tests/fitfunctions/test_core.py +193 -0
  364. tests/fitfunctions/test_exponentials.py +342 -0
  365. tests/fitfunctions/test_gaussians.py +142 -0
  366. tests/fitfunctions/test_lines.py +349 -0
  367. tests/fitfunctions/test_moyal.py +258 -0
  368. tests/fitfunctions/test_plots.py +258 -0
  369. tests/fitfunctions/test_power_laws.py +365 -0
  370. tests/fitfunctions/test_tex_info.py +183 -0
  371. tests/fitfunctions/test_trend_fit_properties.py +31 -0
  372. tests/fitfunctions/test_trend_fits.py +244 -0
  373. tests/plotting/__init__.py +1 -0
  374. tests/plotting/labels/__init__.py +1 -0
  375. tests/plotting/labels/test_chemistry.py +243 -0
  376. tests/plotting/labels/test_composition.py +345 -0
  377. tests/plotting/labels/test_datetime.py +445 -0
  378. tests/plotting/labels/test_elemental_abundance.py +366 -0
  379. tests/plotting/labels/test_init.py +66 -0
  380. tests/plotting/labels/test_labels_base.py +347 -0
  381. tests/plotting/labels/test_special.py +550 -0
  382. tests/plotting/test_agg_plot.py +602 -0
  383. tests/plotting/test_base.py +752 -0
  384. tests/plotting/test_fixtures_utilities.py +775 -0
  385. tests/plotting/test_histograms.py +546 -0
  386. tests/plotting/test_integration.py +675 -0
  387. tests/plotting/test_orbits.py +435 -0
  388. tests/plotting/test_performance.py +708 -0
  389. tests/plotting/test_scatter.py +752 -0
  390. tests/plotting/test_select_data_from_figure.py +1209 -0
  391. tests/plotting/test_spiral.py +573 -0
  392. tests/plotting/test_tools.py +607 -0
  393. tests/plotting/test_visual_validation.py +465 -0
  394. tests/solar_activity/__init__.py +1 -0
  395. tests/solar_activity/lisird/__init__.py +1 -0
  396. tests/solar_activity/lisird/test_extrema_calculator.py +593 -0
  397. tests/solar_activity/lisird/test_lisird_id.py +187 -0
  398. tests/solar_activity/sunspot_number/__init__.py +1 -0
  399. tests/solar_activity/sunspot_number/test_init.py +399 -0
  400. tests/solar_activity/sunspot_number/test_sidc.py +465 -0
  401. tests/solar_activity/sunspot_number/test_sidc_id.py +223 -0
  402. tests/solar_activity/sunspot_number/test_sidc_loader.py +275 -0
  403. tests/solar_activity/sunspot_number/test_ssn_extrema.py +406 -0
  404. tests/solar_activity/test_base.py +656 -0
  405. tests/solar_activity/test_init.py +396 -0
  406. tests/solar_activity/test_plots.py +371 -0
  407. tests/test_circular_imports.py +408 -0
  408. tests/test_issue_titles.py +25 -0
  409. tests/test_statusline.py +298 -0
  410. solarwindpy-0.0.1.dev0.dist-info/METADATA +0 -14
  411. solarwindpy-0.0.1.dev0.dist-info/RECORD +0 -4
  412. solarwindpy-0.0.1.dev0.dist-info/top_level.txt +0 -1
@@ -0,0 +1,347 @@
1
+ import importlib.util
2
+ from pathlib import Path
3
+ import pytest
4
+ import logging
5
+
6
+
7
+ @pytest.fixture(scope="module")
8
+ def labels_base():
9
+ """Load :mod:`solarwindpy.plotting.labels.base` without side effects."""
10
+ path = (
11
+ Path(__file__).resolve().parents[3]
12
+ / "solarwindpy"
13
+ / "plotting"
14
+ / "labels"
15
+ / "base.py"
16
+ )
17
+ spec = importlib.util.spec_from_file_location("swp_labels_base", path)
18
+ module = importlib.util.module_from_spec(spec)
19
+ spec.loader.exec_module(module)
20
+ return module
21
+
22
+
23
+ @pytest.fixture()
24
+ def texlabel_basic(labels_base):
25
+ """Return a typical :class:`TeXlabel` instance."""
26
+ return labels_base.TeXlabel(("v", "x", "p"))
27
+
28
+
29
+ @pytest.fixture()
30
+ def texlabel_ratio(labels_base):
31
+ """Return a ratio :class:`TeXlabel` instance."""
32
+ return labels_base.TeXlabel(("v", "x", "p"), ("n", "", "p"))
33
+
34
+
35
+ @pytest.fixture()
36
+ def texlabel_with_axnorm(labels_base):
37
+ """Return a :class:`TeXlabel` instance with axis normalization."""
38
+ return labels_base.TeXlabel(("n", "", "p"), axnorm="c")
39
+
40
+
41
+ @pytest.fixture()
42
+ def texlabel_with_error(labels_base):
43
+ """Return a :class:`TeXlabel` instance with error measurement."""
44
+ return labels_base.TeXlabel(("v_err", "x", "p"))
45
+
46
+
47
+ @pytest.fixture()
48
+ def texlabel_newline_units(labels_base):
49
+ """Return a :class:`TeXlabel` instance with newline for units."""
50
+ return labels_base.TeXlabel(("T", "", "p"), new_line_for_units=True)
51
+
52
+
53
+ def test_run_species_substitution(labels_base):
54
+ """Verify direct species substitution helper."""
55
+ cases = {
56
+ "p": ("p", 1),
57
+ "p1+p2": ("p_1+p_2", 2),
58
+ "a+p1": ("\\alpha+p_1", 2),
59
+ "Fe": ("\\mathrm{Fe}", 1),
60
+ }
61
+ for pattern, expected in cases.items():
62
+ assert labels_base._run_species_substitution(pattern) == expected
63
+
64
+
65
+ def test_texlabel_attributes(texlabel_basic):
66
+ """Check attributes of a typical :class:`TeXlabel`."""
67
+ assert texlabel_basic.tex == "{v}_{{X};{p}}"
68
+ assert texlabel_basic.units == "\\mathrm{km \\; s^{-1}}"
69
+ assert texlabel_basic.path == Path("v_x_p")
70
+ assert (
71
+ texlabel_basic.with_units
72
+ == "${v}_{{X};{p}} \\; \\left[\\mathrm{km \\; s^{-1}}\\right]$"
73
+ )
74
+
75
+
76
+ def test_texlabel_ratio_attributes(texlabel_ratio):
77
+ """Check attributes of a ratio :class:`TeXlabel`."""
78
+ assert texlabel_ratio.tex == "{v}_{{X};{p}}/n_{p}"
79
+ assert texlabel_ratio.units == "\\mathrm{km \\; s^{-1}}/\\mathrm{cm}^{-3}"
80
+ assert texlabel_ratio.path == Path("v_x_p-OV-n_p")
81
+ assert (
82
+ texlabel_ratio.with_units
83
+ == "${v}_{{X};{p}}/n_{p} \\; \\left[\\mathrm{km \\; s^{-1}}/\\mathrm{cm}^{-3}\\right]$"
84
+ )
85
+
86
+
87
+ def test_texlabel_equality_and_hash(texlabel_basic, texlabel_ratio, labels_base):
88
+ """Ensure equality and hashing are based on ``str``."""
89
+ same_basic = labels_base.TeXlabel(("v", "x", "p"))
90
+ same_ratio = labels_base.TeXlabel(("v", "x", "p"), ("n", "", "p"))
91
+
92
+ assert texlabel_basic == same_basic
93
+ assert hash(texlabel_basic) == hash(same_basic)
94
+
95
+ assert texlabel_ratio == same_ratio
96
+ assert hash(texlabel_ratio) == hash(same_ratio)
97
+
98
+
99
+ def test_texlabel_comparison_operators(texlabel_basic, labels_base):
100
+ """Test comparison operators for TeXlabel objects."""
101
+ label_a = labels_base.TeXlabel(("a", "x", "p")) # Alphabetically first
102
+ label_z = labels_base.TeXlabel(("z", "x", "p")) # Alphabetically last
103
+
104
+ assert label_a < label_z
105
+ assert label_a <= label_z
106
+ assert label_z > label_a
107
+ assert label_z >= label_a
108
+ assert label_a != label_z
109
+
110
+
111
+ def test_texlabel_axnorm_types(labels_base):
112
+ """Test different axis normalization types."""
113
+ test_cases = [
114
+ ("c", "Col."),
115
+ ("r", "Row"),
116
+ ("t", "Total"),
117
+ ("d", "Density"),
118
+ (None, ""),
119
+ ]
120
+
121
+ for axnorm, expected_prefix in test_cases:
122
+ label = labels_base.TeXlabel(("n", "", "p"), axnorm=axnorm)
123
+ if axnorm:
124
+ assert expected_prefix in label.tex
125
+ assert label.units == "\\#"
126
+ else:
127
+ assert label.units == "\\mathrm{cm}^{-3}"
128
+
129
+
130
+ def test_texlabel_error_measurement(texlabel_with_error):
131
+ """Test error measurement handling."""
132
+ assert "\\sigma" in texlabel_with_error.tex
133
+ assert "{v}_{{X};{p}}" in texlabel_with_error.tex
134
+
135
+
136
+ def test_texlabel_newline_units(texlabel_newline_units):
137
+ """Test newline separation for units."""
138
+ assert "$\n$" in texlabel_newline_units.with_units
139
+
140
+
141
+ def test_species_substitution_comprehensive(labels_base):
142
+ """Test comprehensive species substitution patterns."""
143
+ test_cases = {
144
+ "p": ("p", 1),
145
+ "p1": ("p_1", 1),
146
+ "p2": ("p_2", 1),
147
+ "a": ("\\alpha", 1),
148
+ "a1": ("\\alpha_1", 1),
149
+ "a2": ("\\alpha_2", 1),
150
+ "e": ("e^-", 1),
151
+ "he": ("\\mathrm{He}", 1),
152
+ "Fe": ("\\mathrm{Fe}", 1),
153
+ "3He": ("^{3}\\mathrm{He}", 1),
154
+ "16O": ("^{16}\\mathrm{O}", 1),
155
+ "p1+p2": ("p_1+p_2", 2),
156
+ "a+Fe": ("\\alpha+\\mathrm{Fe}", 2),
157
+ }
158
+
159
+ for pattern, expected in test_cases.items():
160
+ result = labels_base._run_species_substitution(pattern)
161
+ assert result == expected, f"Failed for pattern '{pattern}'"
162
+
163
+
164
+ def test_measurement_translation(labels_base):
165
+ """Test measurement translation."""
166
+ test_cases = {
167
+ ("beta", "", "p"): "\\beta",
168
+ ("theta", "", "p"): "\\theta",
169
+ ("pth", "", "p"): "P",
170
+ ("dv", "", "p"): "\\Delta v",
171
+ ("qhat", "", "p"): "\\widehat{q}",
172
+ }
173
+
174
+ for mcs, expected_tex_part in test_cases.items():
175
+ label = labels_base.TeXlabel(mcs)
176
+ assert expected_tex_part in label.tex
177
+
178
+
179
+ def test_component_translation(labels_base):
180
+ """Test component translation."""
181
+ test_cases = {
182
+ ("v", "x", "p"): "X",
183
+ ("v", "y", "p"): "Y",
184
+ ("v", "z", "p"): "Z",
185
+ ("v", "r", "p"): "R",
186
+ ("v", "per", "p"): "\\perp",
187
+ ("v", "par", "p"): "\\parallel",
188
+ }
189
+
190
+ for mcs, expected_component in test_cases.items():
191
+ label = labels_base.TeXlabel(mcs)
192
+ assert expected_component in label.tex
193
+
194
+
195
+ def test_units_translation(labels_base):
196
+ """Test units translation."""
197
+ test_cases = {
198
+ ("v", "x", "p"): "\\mathrm{km \\; s^{-1}}",
199
+ ("n", "", "p"): "\\mathrm{cm}^{-3}",
200
+ ("b", "x", ""): "\\mathrm{nT}",
201
+ ("T", "", "p"): "10^5 \\, \\mathrm{K}",
202
+ ("beta", "", "p"): "\\mathrm{\\#}",
203
+ }
204
+
205
+ for mcs, expected_units in test_cases.items():
206
+ label = labels_base.TeXlabel(mcs)
207
+ assert label.units == expected_units
208
+
209
+
210
+ def test_path_generation(labels_base):
211
+ """Test path generation for different inputs."""
212
+ test_cases = {
213
+ ("v", "x", "p"): "v_x_p",
214
+ ("n", "", "p"): "n_p",
215
+ ("b", "x", ""): "b_x", # Fixed - empty strings are stripped
216
+ ("beta", "", ""): "beta",
217
+ }
218
+
219
+ for mcs, expected_path in test_cases.items():
220
+ label = labels_base.TeXlabel(mcs)
221
+ assert str(label.path) == expected_path
222
+
223
+
224
+ def test_ratio_label_same_units(labels_base):
225
+ """Test ratio labels with same units become dimensionless."""
226
+ # Same measurement, different components - same units
227
+ label = labels_base.TeXlabel(("v", "x", "p"), ("v", "y", "p"))
228
+ assert label.units == "\\#"
229
+
230
+
231
+ def test_ratio_label_different_units(labels_base):
232
+ """Test ratio labels with different units."""
233
+ # Different measurements - different units
234
+ label = labels_base.TeXlabel(("v", "x", "p"), ("n", "", "p"))
235
+ expected_units = "\\mathrm{km \\; s^{-1}}/\\mathrm{cm}^{-3}"
236
+ assert label.units == expected_units
237
+
238
+
239
+ def test_template_substitution(labels_base):
240
+ """Test template substitution for complex measurements."""
241
+ # Test specific template
242
+ label = labels_base.TeXlabel(("cs", "", "p"))
243
+ assert "C_{s;p}" in label.tex
244
+
245
+ # Test default template
246
+ label = labels_base.TeXlabel(("unknown_measurement", "x", "p"))
247
+ assert "{unknown_measurement}_{{X};{p}}" in label.tex
248
+
249
+
250
+ def test_tex_cleanup(labels_base):
251
+ """Test TeX string cleanup operations."""
252
+ # Test empty component cleanup
253
+ label = labels_base.TeXlabel(("v", "", "p"))
254
+ assert "{}" not in label.tex
255
+ assert "()" not in label.tex
256
+
257
+ # Test empty species cleanup
258
+ label = labels_base.TeXlabel(("v", "x", ""))
259
+ assert "_;{}" not in label.tex
260
+
261
+
262
+ def test_base_class_properties(labels_base):
263
+ """Test Base class properties and methods."""
264
+ base_instance = labels_base.TeXlabel(("v", "x", "p"))
265
+
266
+ # Test logger
267
+ assert hasattr(base_instance, "logger")
268
+ assert isinstance(base_instance.logger, logging.Logger)
269
+
270
+ # Test string representations
271
+ assert str(base_instance) == base_instance.with_units
272
+ assert repr(base_instance) == str(base_instance.tex)
273
+
274
+
275
+ def test_mcs_namedtuple(labels_base):
276
+ """Test MCS namedtuple functionality."""
277
+ mcs = labels_base.MCS("v", "x", "p")
278
+ assert mcs.m == "v"
279
+ assert mcs.c == "x"
280
+ assert mcs.s == "p"
281
+
282
+
283
+ def test_texlabel_set_methods(labels_base):
284
+ """Test TeXlabel setter methods."""
285
+ label = labels_base.TeXlabel(("v", "x", "p"))
286
+
287
+ # Test set_axnorm
288
+ label.set_axnorm("r")
289
+ assert label.axnorm == "r"
290
+
291
+ label.set_axnorm("C") # Test case conversion
292
+ assert label.axnorm == "c"
293
+
294
+ # Test set_new_line_for_units
295
+ label.set_new_line_for_units(True)
296
+ assert label.new_line_for_units is True
297
+
298
+ label.set_new_line_for_units(0) # Test bool conversion
299
+ assert label.new_line_for_units is False
300
+
301
+ # Test set_mcs
302
+ label.set_mcs(("n", "", "p"), ("T", "", "p"))
303
+ assert label.mcs0.m == "n"
304
+ assert label.mcs1.m == "T"
305
+
306
+
307
+ def test_axnorm_validation(labels_base):
308
+ """Test axis normalization validation."""
309
+ valid_values = [None, "c", "r", "t", "d"]
310
+
311
+ for val in valid_values:
312
+ label = labels_base.TeXlabel(("v", "x", "p"), axnorm=val)
313
+ assert label.axnorm == val
314
+
315
+ # Test invalid axnorm
316
+ with pytest.raises(AssertionError):
317
+ labels_base.TeXlabel(("v", "x", "p"), axnorm="invalid")
318
+
319
+
320
+ def test_path_special_characters(labels_base):
321
+ """Test path handling with special characters."""
322
+ # Test forward slash replacement
323
+ label = labels_base.TeXlabel(("test/measurement", "x", "p"))
324
+ assert "-OV-" in str(label.path)
325
+
326
+ # Test comma and dot removal
327
+ label = labels_base.TeXlabel(("test.measurement", "x", "p,ion"))
328
+ path_str = str(label.path)
329
+ assert "." not in path_str
330
+ assert "," not in path_str
331
+
332
+
333
+ def test_empty_string_handling(labels_base):
334
+ """Test handling of empty strings in MCS components."""
335
+ cases = [
336
+ ("", "x", "p"), # Empty measurement
337
+ ("v", "", "p"), # Empty component
338
+ ("v", "x", ""), # Empty species
339
+ ("", "", ""), # All empty
340
+ ]
341
+
342
+ for mcs in cases:
343
+ # Should not raise exception
344
+ label = labels_base.TeXlabel(mcs)
345
+ assert hasattr(label, "tex")
346
+ assert hasattr(label, "units")
347
+ assert hasattr(label, "path")