numpy 1.9.3__zip → 1.10.0__zip
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- numpy-1.10.0.post2/INSTALL.txt +200 -0
- numpy-1.10.0.post2/LICENSE.txt +30 -0
- numpy-1.10.0.post2/MANIFEST.in +31 -0
- numpy-1.10.0.post2/PKG-INFO +47 -0
- numpy-1.10.0.post2/cnew.txt +117 -0
- numpy-1.10.0.post2/cold.txt +44 -0
- numpy-1.10.0.post2/committers.txt +160 -0
- numpy-1.10.0.post2/cpre.txt +283 -0
- numpy-1.10.0.post2/crel.txt +161 -0
- numpy-1.10.0.post2/doc/release/1.10.0-notes.rst +439 -0
- numpy-1.10.0.post2/doc/source/conf.py +331 -0
- numpy-1.10.0.post2/doc/source/dev/development_environment.rst +211 -0
- numpy-1.10.0.post2/doc/source/dev/gitwash/development_workflow.rst +534 -0
- numpy-1.10.0.post2/doc/source/dev/gitwash/git_links.inc +95 -0
- numpy-1.10.0.post2/doc/source/dev/gitwash/index.rst +14 -0
- numpy-1.10.0.post2/doc/source/dev/index.rst +11 -0
- numpy-1.10.0.post2/doc/source/reference/arrays.classes.rst +490 -0
- numpy-1.10.0.post2/doc/source/reference/arrays.dtypes.rst +536 -0
- numpy-1.10.0.post2/doc/source/reference/arrays.indexing.rst +549 -0
- numpy-1.10.0.post2/doc/source/reference/arrays.interface.rst +337 -0
- numpy-1.10.0.post2/doc/source/reference/arrays.ndarray.rst +622 -0
- numpy-1.10.0.post2/doc/source/reference/arrays.scalars.rst +291 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.array.rst +3393 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.config.rst +103 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.coremath.rst +420 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.dtype.rst +376 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.generalized-ufuncs.rst +191 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.iterator.rst +1300 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.types-and-structures.rst +1240 -0
- numpy-1.10.0.post2/doc/source/reference/c-api.ufunc.rst +413 -0
- numpy-1.10.0.post2/doc/source/reference/index.rst +43 -0
- numpy-1.10.0.post2/doc/source/reference/internals.code-explanations.rst +615 -0
- numpy-1.10.0.post2/doc/source/reference/routines.array-manipulation.rst +115 -0
- numpy-1.10.0.post2/doc/source/reference/routines.io.rst +78 -0
- numpy-1.10.0.post2/doc/source/reference/routines.linalg.rst +91 -0
- numpy-1.10.0.post2/doc/source/reference/routines.ma.rst +407 -0
- numpy-1.10.0.post2/doc/source/reference/routines.sort.rst +41 -0
- numpy-1.10.0.post2/doc/source/reference/routines.statistics.rst +57 -0
- numpy-1.10.0.post2/doc/source/reference/swig.interface-file.rst +1066 -0
- numpy-1.10.0.post2/doc/source/reference/swig.testing.rst +167 -0
- numpy-1.10.0.post2/doc/source/reference/ufuncs.rst +666 -0
- numpy-1.10.0.post2/doc/source/release.rst +20 -0
- numpy-1.10.0.post2/doc/source/user/basics.io.genfromtxt.rst +531 -0
- numpy-1.10.0.post2/doc/source/user/basics.rec.rst +7 -0
- numpy-1.10.0.post2/doc/source/user/c-info.beyond-basics.rst +560 -0
- numpy-1.10.0.post2/doc/source/user/c-info.how-to-extend.rst +642 -0
- numpy-1.10.0.post2/doc/source/user/c-info.python-as-glue.rst +1177 -0
- numpy-1.10.0.post2/doc/source/user/c-info.ufunc-tutorial.rst +1211 -0
- numpy-1.10.0.post2/doc/source/user/install.rst +194 -0
- numpy-1.10.0.post2/numpy/__init__.py +227 -0
- numpy-1.10.0.post2/numpy/_build_utils/README +8 -0
- numpy-1.10.0.post2/numpy/_build_utils/apple_accelerate.py +21 -0
- numpy-1.10.0.post2/numpy/_build_utils/common.py +138 -0
- numpy-1.10.0.post2/numpy/_build_utils/src/apple_sgemv_fix.c +227 -0
- numpy-1.10.0.post2/numpy/_build_utils/waf.py +531 -0
- numpy-1.10.0.post2/numpy/_import_tools.py +353 -0
- numpy-1.10.0.post2/numpy/add_newdocs.py +7611 -0
- numpy-1.10.0.post2/numpy/compat/_inspect.py +194 -0
- numpy-1.10.0.post2/numpy/compat/py3k.py +88 -0
- numpy-1.10.0.post2/numpy/compat/setup.py +12 -0
- numpy-1.10.0.post2/numpy/core/__init__.py +89 -0
- numpy-1.10.0.post2/numpy/core/_internal.py +761 -0
- numpy-1.10.0.post2/numpy/core/_methods.py +133 -0
- numpy-1.10.0.post2/numpy/core/arrayprint.py +760 -0
- numpy-1.10.0.post2/numpy/core/code_generators/cversions.txt +34 -0
- numpy-1.10.0.post2/numpy/core/code_generators/generate_ufunc_api.py +219 -0
- numpy-1.10.0.post2/numpy/core/code_generators/generate_umath.py +1017 -0
- numpy-1.10.0.post2/numpy/core/code_generators/numpy_api.py +415 -0
- numpy-1.10.0.post2/numpy/core/code_generators/ufunc_docstrings.py +3442 -0
- numpy-1.10.0.post2/numpy/core/defchararray.py +2689 -0
- numpy-1.10.0.post2/numpy/core/fromnumeric.py +3089 -0
- numpy-1.10.0.post2/numpy/core/function_base.py +203 -0
- numpy-1.10.0.post2/numpy/core/getlimits.py +308 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/ndarrayobject.h +246 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/ndarraytypes.h +1797 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/npy_3kcompat.h +448 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/npy_common.h +1051 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/npy_cpu.h +92 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/npy_endian.h +61 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/npy_math.h +525 -0
- numpy-1.10.0.post2/numpy/core/include/numpy/numpyconfig.h +36 -0
- numpy-1.10.0.post2/numpy/core/machar.py +342 -0
- numpy-1.10.0.post2/numpy/core/memmap.py +311 -0
- numpy-1.10.0.post2/numpy/core/numeric.py +2893 -0
- numpy-1.10.0.post2/numpy/core/numerictypes.py +1036 -0
- numpy-1.10.0.post2/numpy/core/records.py +846 -0
- numpy-1.10.0.post2/numpy/core/setup.py +983 -0
- numpy-1.10.0.post2/numpy/core/setup_common.py +352 -0
- numpy-1.10.0.post2/numpy/core/shape_base.py +350 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/alloc.c +244 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/arrayobject.c +1858 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/arraytypes.c.src +4738 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/arraytypes.h +37 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/buffer.c +981 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/calculation.c +1224 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/cblasfuncs.c +812 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/cblasfuncs.h +10 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/common.c +911 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/common.h +250 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/compiled_base.c +1664 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/compiled_base.h +24 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/conversion_utils.c +1217 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/convert.c +590 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/convert_datatype.c +2155 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/ctors.c +3838 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/datetime.c +3821 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_busday.c +1322 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_busdaycal.c +552 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_strings.c +1772 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/descriptor.c +3719 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/dtype_transfer.c +4239 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/einsum.c.src +3005 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/getset.c +986 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/hashdescr.c +318 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/item_selection.c +2413 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/iterators.c +2192 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/lowlevel_strided_loops.c.src +1769 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/mapping.c +3380 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/mapping.h +77 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/methods.c +2514 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/multiarray_tests.c.src +1035 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/multiarraymodule.c +4628 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/multiarraymodule.h +15 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_api.c +2809 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_constr.c +3160 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_pywrap.c +2499 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/number.c +1106 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/number.h +77 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/numpymemoryview.c +308 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/numpyos.c +683 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/scalarapi.c +870 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/scalartypes.c.src +4343 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/scalartypes.h +55 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/shape.c +1131 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/ucsnarrow.c +174 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/vdot.c +180 -0
- numpy-1.10.0.post2/numpy/core/src/multiarray/vdot.h +18 -0
- numpy-1.10.0.post2/numpy/core/src/npymath/ieee754.c.src +808 -0
- numpy-1.10.0.post2/numpy/core/src/npymath/npy_math.c.src +597 -0
- numpy-1.10.0.post2/numpy/core/src/npymath/npy_math_complex.c.src +1788 -0
- numpy-1.10.0.post2/numpy/core/src/npymath/npy_math_private.h +544 -0
- numpy-1.10.0.post2/numpy/core/src/npysort/heapsort.c.src +402 -0
- numpy-1.10.0.post2/numpy/core/src/npysort/mergesort.c.src +488 -0
- numpy-1.10.0.post2/numpy/core/src/npysort/npysort_common.h +360 -0
- numpy-1.10.0.post2/numpy/core/src/npysort/quicksort.c.src +523 -0
- numpy-1.10.0.post2/numpy/core/src/npysort/selection.c.src +426 -0
- numpy-1.10.0.post2/numpy/core/src/private/npy_cblas.h +584 -0
- numpy-1.10.0.post2/numpy/core/src/private/npy_config.h +101 -0
- numpy-1.10.0.post2/numpy/core/src/private/npy_import.h +32 -0
- numpy-1.10.0.post2/numpy/core/src/private/npy_partition.h.src +122 -0
- numpy-1.10.0.post2/numpy/core/src/private/npy_sort.h +196 -0
- numpy-1.10.0.post2/numpy/core/src/private/templ_common.h.src +43 -0
- numpy-1.10.0.post2/numpy/core/src/private/ufunc_override.h +397 -0
- numpy-1.10.0.post2/numpy/core/src/umath/funcs.inc.src +356 -0
- numpy-1.10.0.post2/numpy/core/src/umath/loops.c.src +2675 -0
- numpy-1.10.0.post2/numpy/core/src/umath/loops.h.src +497 -0
- numpy-1.10.0.post2/numpy/core/src/umath/operand_flag_tests.c.src +105 -0
- numpy-1.10.0.post2/numpy/core/src/umath/scalarmath.c.src +1738 -0
- numpy-1.10.0.post2/numpy/core/src/umath/simd.inc.src +903 -0
- numpy-1.10.0.post2/numpy/core/src/umath/test_rational.c.src +1404 -0
- numpy-1.10.0.post2/numpy/core/src/umath/ufunc_object.c +5703 -0
- numpy-1.10.0.post2/numpy/core/src/umath/ufunc_type_resolution.c +2159 -0
- numpy-1.10.0.post2/numpy/core/src/umath/umath_tests.c.src +392 -0
- numpy-1.10.0.post2/numpy/core/src/umath/umathmodule.c +443 -0
- numpy-1.10.0.post2/numpy/core/tests/test_abc.py +47 -0
- numpy-1.10.0.post2/numpy/core/tests/test_api.py +515 -0
- numpy-1.10.0.post2/numpy/core/tests/test_arrayprint.py +171 -0
- numpy-1.10.0.post2/numpy/core/tests/test_datetime.py +1820 -0
- numpy-1.10.0.post2/numpy/core/tests/test_defchararray.py +703 -0
- numpy-1.10.0.post2/numpy/core/tests/test_deprecations.py +619 -0
- numpy-1.10.0.post2/numpy/core/tests/test_dtype.py +578 -0
- numpy-1.10.0.post2/numpy/core/tests/test_einsum.py +627 -0
- numpy-1.10.0.post2/numpy/core/tests/test_errstate.py +52 -0
- numpy-1.10.0.post2/numpy/core/tests/test_function_base.py +142 -0
- numpy-1.10.0.post2/numpy/core/tests/test_getlimits.py +77 -0
- numpy-1.10.0.post2/numpy/core/tests/test_half.py +436 -0
- numpy-1.10.0.post2/numpy/core/tests/test_indexerrors.py +126 -0
- numpy-1.10.0.post2/numpy/core/tests/test_indexing.py +1047 -0
- numpy-1.10.0.post2/numpy/core/tests/test_item_selection.py +73 -0
- numpy-1.10.0.post2/numpy/core/tests/test_machar.py +29 -0
- numpy-1.10.0.post2/numpy/core/tests/test_memmap.py +130 -0
- numpy-1.10.0.post2/numpy/core/tests/test_multiarray.py +5924 -0
- numpy-1.10.0.post2/numpy/core/tests/test_multiarray_assignment.py +84 -0
- numpy-1.10.0.post2/numpy/core/tests/test_nditer.py +2638 -0
- numpy-1.10.0.post2/numpy/core/tests/test_numeric.py +2204 -0
- numpy-1.10.0.post2/numpy/core/tests/test_numerictypes.py +382 -0
- numpy-1.10.0.post2/numpy/core/tests/test_print.py +248 -0
- numpy-1.10.0.post2/numpy/core/tests/test_records.py +299 -0
- numpy-1.10.0.post2/numpy/core/tests/test_regression.py +2177 -0
- numpy-1.10.0.post2/numpy/core/tests/test_scalarinherit.py +41 -0
- numpy-1.10.0.post2/numpy/core/tests/test_scalarmath.py +316 -0
- numpy-1.10.0.post2/numpy/core/tests/test_shape_base.py +319 -0
- numpy-1.10.0.post2/numpy/core/tests/test_ufunc.py +1227 -0
- numpy-1.10.0.post2/numpy/core/tests/test_umath.py +1933 -0
- numpy-1.10.0.post2/numpy/core/tests/test_umath_complex.py +538 -0
- numpy-1.10.0.post2/numpy/core/tests/test_unicode.py +360 -0
- numpy-1.10.0.post2/numpy/distutils/__init__.py +23 -0
- numpy-1.10.0.post2/numpy/distutils/ccompiler.py +690 -0
- numpy-1.10.0.post2/numpy/distutils/command/autodist.py +94 -0
- numpy-1.10.0.post2/numpy/distutils/command/build.py +47 -0
- numpy-1.10.0.post2/numpy/distutils/command/build_clib.py +295 -0
- numpy-1.10.0.post2/numpy/distutils/command/build_ext.py +522 -0
- numpy-1.10.0.post2/numpy/distutils/command/config.py +437 -0
- numpy-1.10.0.post2/numpy/distutils/exec_command.py +651 -0
- numpy-1.10.0.post2/numpy/distutils/fcompiler/compaq.py +128 -0
- numpy-1.10.0.post2/numpy/distutils/fcompiler/gnu.py +403 -0
- numpy-1.10.0.post2/numpy/distutils/fcompiler/intel.py +217 -0
- numpy-1.10.0.post2/numpy/distutils/fcompiler/pg.py +63 -0
- numpy-1.10.0.post2/numpy/distutils/fcompiler/sun.py +55 -0
- numpy-1.10.0.post2/numpy/distutils/intelccompiler.py +95 -0
- numpy-1.10.0.post2/numpy/distutils/lib2def.py +116 -0
- numpy-1.10.0.post2/numpy/distutils/mingw32ccompiler.py +599 -0
- numpy-1.10.0.post2/numpy/distutils/misc_util.py +2306 -0
- numpy-1.10.0.post2/numpy/distutils/msvc9compiler.py +23 -0
- numpy-1.10.0.post2/numpy/distutils/msvccompiler.py +17 -0
- numpy-1.10.0.post2/numpy/distutils/npy_pkg_config.py +451 -0
- numpy-1.10.0.post2/numpy/distutils/system_info.py +2397 -0
- numpy-1.10.0.post2/numpy/distutils/tests/f2py_ext/tests/test_fib2.py +12 -0
- numpy-1.10.0.post2/numpy/distutils/tests/f2py_f90_ext/tests/test_foo.py +11 -0
- numpy-1.10.0.post2/numpy/distutils/tests/gen_ext/tests/test_fib3.py +11 -0
- numpy-1.10.0.post2/numpy/distutils/tests/pyrex_ext/tests/test_primes.py +13 -0
- numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/__init__.py +1 -0
- numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/tests/test_example.py +17 -0
- numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/tests/test_example2.py +15 -0
- numpy-1.10.0.post2/numpy/distutils/tests/test_fcompiler_gnu.py +60 -0
- numpy-1.10.0.post2/numpy/distutils/tests/test_fcompiler_intel.py +36 -0
- numpy-1.10.0.post2/numpy/distutils/tests/test_misc_util.py +79 -0
- numpy-1.10.0.post2/numpy/distutils/tests/test_npy_pkg_config.py +102 -0
- numpy-1.10.0.post2/numpy/distutils/tests/test_system_info.py +209 -0
- numpy-1.10.0.post2/numpy/distutils/unixccompiler.py +125 -0
- numpy-1.10.0.post2/numpy/doc/byteswapping.py +156 -0
- numpy-1.10.0.post2/numpy/doc/creation.py +144 -0
- numpy-1.10.0.post2/numpy/doc/glossary.py +423 -0
- numpy-1.10.0.post2/numpy/doc/indexing.py +439 -0
- numpy-1.10.0.post2/numpy/doc/structured_arrays.py +290 -0
- numpy-1.10.0.post2/numpy/f2py/__init__.py +49 -0
- numpy-1.10.0.post2/numpy/f2py/__main__.py +25 -0
- numpy-1.10.0.post2/numpy/f2py/auxfuncs.py +858 -0
- numpy-1.10.0.post2/numpy/f2py/capi_maps.py +851 -0
- numpy-1.10.0.post2/numpy/f2py/cb_rules.py +554 -0
- numpy-1.10.0.post2/numpy/f2py/cfuncs.py +1261 -0
- numpy-1.10.0.post2/numpy/f2py/common_rules.py +150 -0
- numpy-1.10.0.post2/numpy/f2py/crackfortran.py +3314 -0
- numpy-1.10.0.post2/numpy/f2py/diagnose.py +156 -0
- numpy-1.10.0.post2/numpy/f2py/f2py2e.py +656 -0
- numpy-1.10.0.post2/numpy/f2py/f2py_testing.py +48 -0
- numpy-1.10.0.post2/numpy/f2py/f90mod_rules.py +272 -0
- numpy-1.10.0.post2/numpy/f2py/func2subr.py +299 -0
- numpy-1.10.0.post2/numpy/f2py/rules.py +1475 -0
- numpy-1.10.0.post2/numpy/f2py/setup.py +117 -0
- numpy-1.10.0.post2/numpy/f2py/src/fortranobject.c +1037 -0
- numpy-1.10.0.post2/numpy/f2py/src/fortranobject.h +162 -0
- numpy-1.10.0.post2/numpy/f2py/tests/src/array_from_pyobj/wrapmodule.c +223 -0
- numpy-1.10.0.post2/numpy/f2py/tests/test_array_from_pyobj.py +593 -0
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instead.
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If False, the result will contain the number of samples
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in each bin. If True, the result is the value of the
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probability *density* function at the bin, normalized such that
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the *integral* over the range is 1. Note that this latter behavior is
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known to be buggy with unequal bin widths; use `density` instead.
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weights : array_like, optional
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An array of weights, of the same shape as `a`. Each value in `a`
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only contributes its associated weight towards the bin count
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(instead of 1). If `normed` is True, the weights are normalized,
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so that the integral of the density over the range remains 1
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density : bool, optional
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If False, the result will contain the number of samples
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in each bin. If True, the result is the value of the
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probability *density* function at the bin, normalized such that
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the *integral* over the range is 1. Note that the sum of the
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histogram values will not be equal to 1 unless bins of unity
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width are chosen; it is not a probability *mass* function.
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Overrides the `normed` keyword if given.
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Returns
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-------
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hist : array
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The values of the histogram. See `normed` and `weights` for a
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description of the possible semantics.
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bin_edges : array of dtype float
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Return the bin edges ``(length(hist)+1)``.
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See Also
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--------
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histogramdd, bincount, searchsorted, digitize
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Notes
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-----
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All but the last (righthand-most) bin is half-open. In other words, if
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`bins` is::
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[1, 2, 3, 4]
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then the first bin is ``[1, 2)`` (including 1, but excluding 2) and the
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second ``[2, 3)``. The last bin, however, is ``[3, 4]``, which *includes*
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4.
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Examples
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|
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--------
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|
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>>> np.histogram([1, 2, 1], bins=[0, 1, 2, 3])
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(array([0, 2, 1]), array([0, 1, 2, 3]))
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>>> np.histogram(np.arange(4), bins=np.arange(5), density=True)
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|
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(array([ 0.25, 0.25, 0.25, 0.25]), array([0, 1, 2, 3, 4]))
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>>> np.histogram([[1, 2, 1], [1, 0, 1]], bins=[0,1,2,3])
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(array([1, 4, 1]), array([0, 1, 2, 3]))
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>>> a = np.arange(5)
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|
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>>> hist, bin_edges = np.histogram(a, density=True)
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|
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>>> hist
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|
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array([ 0.5, 0. , 0.5, 0. , 0. , 0.5, 0. , 0.5, 0. , 0.5])
|
|
156
|
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>>> hist.sum()
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|
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2.4999999999999996
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158
|
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>>> np.sum(hist*np.diff(bin_edges))
|
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|
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1.0
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160
|
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|
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161
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"""
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163
|
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a = asarray(a)
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if weights is not None:
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weights = asarray(weights)
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|
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if np.any(weights.shape != a.shape):
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raise ValueError(
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168
|
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'weights should have the same shape as a.')
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weights = weights.ravel()
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a = a.ravel()
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if (range is not None):
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|
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mn, mx = range
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174
|
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if (mn > mx):
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|
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raise AttributeError(
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176
|
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'max must be larger than min in range parameter.')
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|
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178
|
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if not iterable(bins):
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179
|
-
if np.isscalar(bins) and bins < 1:
|
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180
|
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raise ValueError(
|
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181
|
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'`bins` should be a positive integer.')
|
|
182
|
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if range is None:
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|
183
|
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if a.size == 0:
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|
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# handle empty arrays. Can't determine range, so use 0-1.
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|
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range = (0, 1)
|
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186
|
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else:
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|
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range = (a.min(), a.max())
|
|
188
|
-
mn, mx = [mi + 0.0 for mi in range]
|
|
189
|
-
if mn == mx:
|
|
190
|
-
mn -= 0.5
|
|
191
|
-
mx += 0.5
|
|
192
|
-
bins = linspace(mn, mx, bins + 1, endpoint=True)
|
|
193
|
-
else:
|
|
194
|
-
bins = asarray(bins)
|
|
195
|
-
if (np.diff(bins) < 0).any():
|
|
196
|
-
raise AttributeError(
|
|
197
|
-
'bins must increase monotonically.')
|
|
198
|
-
|
|
199
|
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# Histogram is an integer or a float array depending on the weights.
|
|
200
|
-
if weights is None:
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|
201
|
-
ntype = int
|
|
202
|
-
else:
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|
203
|
-
ntype = weights.dtype
|
|
204
|
-
n = np.zeros(bins.shape, ntype)
|
|
205
|
-
|
|
206
|
-
block = 65536
|
|
207
|
-
if weights is None:
|
|
208
|
-
for i in arange(0, len(a), block):
|
|
209
|
-
sa = sort(a[i:i+block])
|
|
210
|
-
n += np.r_[sa.searchsorted(bins[:-1], 'left'),
|
|
211
|
-
sa.searchsorted(bins[-1], 'right')]
|
|
212
|
-
else:
|
|
213
|
-
zero = array(0, dtype=ntype)
|
|
214
|
-
for i in arange(0, len(a), block):
|
|
215
|
-
tmp_a = a[i:i+block]
|
|
216
|
-
tmp_w = weights[i:i+block]
|
|
217
|
-
sorting_index = np.argsort(tmp_a)
|
|
218
|
-
sa = tmp_a[sorting_index]
|
|
219
|
-
sw = tmp_w[sorting_index]
|
|
220
|
-
cw = np.concatenate(([zero, ], sw.cumsum()))
|
|
221
|
-
bin_index = np.r_[sa.searchsorted(bins[:-1], 'left'),
|
|
222
|
-
sa.searchsorted(bins[-1], 'right')]
|
|
223
|
-
n += cw[bin_index]
|
|
224
|
-
|
|
225
|
-
n = np.diff(n)
|
|
226
|
-
|
|
227
|
-
if density is not None:
|
|
228
|
-
if density:
|
|
229
|
-
db = array(np.diff(bins), float)
|
|
230
|
-
return n/db/n.sum(), bins
|
|
231
|
-
else:
|
|
232
|
-
return n, bins
|
|
233
|
-
else:
|
|
234
|
-
# deprecated, buggy behavior. Remove for Numpy 2.0
|
|
235
|
-
if normed:
|
|
236
|
-
db = array(np.diff(bins), float)
|
|
237
|
-
return n/(n*db).sum(), bins
|
|
238
|
-
else:
|
|
239
|
-
return n, bins
|
|
240
|
-
|
|
241
|
-
|
|
242
|
-
def histogramdd(sample, bins=10, range=None, normed=False, weights=None):
|
|
243
|
-
"""
|
|
244
|
-
Compute the multidimensional histogram of some data.
|
|
245
|
-
|
|
246
|
-
Parameters
|
|
247
|
-
----------
|
|
248
|
-
sample : array_like
|
|
249
|
-
The data to be histogrammed. It must be an (N,D) array or data
|
|
250
|
-
that can be converted to such. The rows of the resulting array
|
|
251
|
-
are the coordinates of points in a D dimensional polytope.
|
|
252
|
-
bins : sequence or int, optional
|
|
253
|
-
The bin specification:
|
|
254
|
-
|
|
255
|
-
* A sequence of arrays describing the bin edges along each dimension.
|
|
256
|
-
* The number of bins for each dimension (nx, ny, ... =bins)
|
|
257
|
-
* The number of bins for all dimensions (nx=ny=...=bins).
|
|
258
|
-
|
|
259
|
-
range : sequence, optional
|
|
260
|
-
A sequence of lower and upper bin edges to be used if the edges are
|
|
261
|
-
not given explicitly in `bins`. Defaults to the minimum and maximum
|
|
262
|
-
values along each dimension.
|
|
263
|
-
normed : bool, optional
|
|
264
|
-
If False, returns the number of samples in each bin. If True,
|
|
265
|
-
returns the bin density ``bin_count / sample_count / bin_volume``.
|
|
266
|
-
weights : array_like (N,), optional
|
|
267
|
-
An array of values `w_i` weighing each sample `(x_i, y_i, z_i, ...)`.
|
|
268
|
-
Weights are normalized to 1 if normed is True. If normed is False,
|
|
269
|
-
the values of the returned histogram are equal to the sum of the
|
|
270
|
-
weights belonging to the samples falling into each bin.
|
|
271
|
-
|
|
272
|
-
Returns
|
|
273
|
-
-------
|
|
274
|
-
H : ndarray
|
|
275
|
-
The multidimensional histogram of sample x. See normed and weights
|
|
276
|
-
for the different possible semantics.
|
|
277
|
-
edges : list
|
|
278
|
-
A list of D arrays describing the bin edges for each dimension.
|
|
279
|
-
|
|
280
|
-
See Also
|
|
281
|
-
--------
|
|
282
|
-
histogram: 1-D histogram
|
|
283
|
-
histogram2d: 2-D histogram
|
|
284
|
-
|
|
285
|
-
Examples
|
|
286
|
-
--------
|
|
287
|
-
>>> r = np.random.randn(100,3)
|
|
288
|
-
>>> H, edges = np.histogramdd(r, bins = (5, 8, 4))
|
|
289
|
-
>>> H.shape, edges[0].size, edges[1].size, edges[2].size
|
|
290
|
-
((5, 8, 4), 6, 9, 5)
|
|
291
|
-
|
|
292
|
-
"""
|
|
293
|
-
|
|
294
|
-
try:
|
|
295
|
-
# Sample is an ND-array.
|
|
296
|
-
N, D = sample.shape
|
|
297
|
-
except (AttributeError, ValueError):
|
|
298
|
-
# Sample is a sequence of 1D arrays.
|
|
299
|
-
sample = atleast_2d(sample).T
|
|
300
|
-
N, D = sample.shape
|
|
301
|
-
|
|
302
|
-
nbin = empty(D, int)
|
|
303
|
-
edges = D*[None]
|
|
304
|
-
dedges = D*[None]
|
|
305
|
-
if weights is not None:
|
|
306
|
-
weights = asarray(weights)
|
|
307
|
-
|
|
308
|
-
try:
|
|
309
|
-
M = len(bins)
|
|
310
|
-
if M != D:
|
|
311
|
-
raise AttributeError(
|
|
312
|
-
'The dimension of bins must be equal to the dimension of the '
|
|
313
|
-
' sample x.')
|
|
314
|
-
except TypeError:
|
|
315
|
-
# bins is an integer
|
|
316
|
-
bins = D*[bins]
|
|
317
|
-
|
|
318
|
-
# Select range for each dimension
|
|
319
|
-
# Used only if number of bins is given.
|
|
320
|
-
if range is None:
|
|
321
|
-
# Handle empty input. Range can't be determined in that case, use 0-1.
|
|
322
|
-
if N == 0:
|
|
323
|
-
smin = zeros(D)
|
|
324
|
-
smax = ones(D)
|
|
325
|
-
else:
|
|
326
|
-
smin = atleast_1d(array(sample.min(0), float))
|
|
327
|
-
smax = atleast_1d(array(sample.max(0), float))
|
|
328
|
-
else:
|
|
329
|
-
smin = zeros(D)
|
|
330
|
-
smax = zeros(D)
|
|
331
|
-
for i in arange(D):
|
|
332
|
-
smin[i], smax[i] = range[i]
|
|
333
|
-
|
|
334
|
-
# Make sure the bins have a finite width.
|
|
335
|
-
for i in arange(len(smin)):
|
|
336
|
-
if smin[i] == smax[i]:
|
|
337
|
-
smin[i] = smin[i] - .5
|
|
338
|
-
smax[i] = smax[i] + .5
|
|
339
|
-
|
|
340
|
-
# avoid rounding issues for comparisons when dealing with inexact types
|
|
341
|
-
if np.issubdtype(sample.dtype, np.inexact):
|
|
342
|
-
edge_dt = sample.dtype
|
|
343
|
-
else:
|
|
344
|
-
edge_dt = float
|
|
345
|
-
# Create edge arrays
|
|
346
|
-
for i in arange(D):
|
|
347
|
-
if isscalar(bins[i]):
|
|
348
|
-
if bins[i] < 1:
|
|
349
|
-
raise ValueError(
|
|
350
|
-
"Element at index %s in `bins` should be a positive "
|
|
351
|
-
"integer." % i)
|
|
352
|
-
nbin[i] = bins[i] + 2 # +2 for outlier bins
|
|
353
|
-
edges[i] = linspace(smin[i], smax[i], nbin[i]-1, dtype=edge_dt)
|
|
354
|
-
else:
|
|
355
|
-
edges[i] = asarray(bins[i], edge_dt)
|
|
356
|
-
nbin[i] = len(edges[i]) + 1 # +1 for outlier bins
|
|
357
|
-
dedges[i] = diff(edges[i])
|
|
358
|
-
if np.any(np.asarray(dedges[i]) <= 0):
|
|
359
|
-
raise ValueError(
|
|
360
|
-
"Found bin edge of size <= 0. Did you specify `bins` with"
|
|
361
|
-
"non-monotonic sequence?")
|
|
362
|
-
|
|
363
|
-
nbin = asarray(nbin)
|
|
364
|
-
|
|
365
|
-
# Handle empty input.
|
|
366
|
-
if N == 0:
|
|
367
|
-
return np.zeros(nbin-2), edges
|
|
368
|
-
|
|
369
|
-
# Compute the bin number each sample falls into.
|
|
370
|
-
Ncount = {}
|
|
371
|
-
for i in arange(D):
|
|
372
|
-
Ncount[i] = digitize(sample[:, i], edges[i])
|
|
373
|
-
|
|
374
|
-
# Using digitize, values that fall on an edge are put in the right bin.
|
|
375
|
-
# For the rightmost bin, we want values equal to the right edge to be
|
|
376
|
-
# counted in the last bin, and not as an outlier.
|
|
377
|
-
for i in arange(D):
|
|
378
|
-
# Rounding precision
|
|
379
|
-
mindiff = dedges[i].min()
|
|
380
|
-
if not np.isinf(mindiff):
|
|
381
|
-
decimal = int(-log10(mindiff)) + 6
|
|
382
|
-
# Find which points are on the rightmost edge.
|
|
383
|
-
not_smaller_than_edge = (sample[:, i] >= edges[i][-1])
|
|
384
|
-
on_edge = (around(sample[:, i], decimal) ==
|
|
385
|
-
around(edges[i][-1], decimal))
|
|
386
|
-
# Shift these points one bin to the left.
|
|
387
|
-
Ncount[i][where(on_edge & not_smaller_than_edge)[0]] -= 1
|
|
388
|
-
|
|
389
|
-
# Flattened histogram matrix (1D)
|
|
390
|
-
# Reshape is used so that overlarge arrays
|
|
391
|
-
# will raise an error.
|
|
392
|
-
hist = zeros(nbin, float).reshape(-1)
|
|
393
|
-
|
|
394
|
-
# Compute the sample indices in the flattened histogram matrix.
|
|
395
|
-
ni = nbin.argsort()
|
|
396
|
-
xy = zeros(N, int)
|
|
397
|
-
for i in arange(0, D-1):
|
|
398
|
-
xy += Ncount[ni[i]] * nbin[ni[i+1:]].prod()
|
|
399
|
-
xy += Ncount[ni[-1]]
|
|
400
|
-
|
|
401
|
-
# Compute the number of repetitions in xy and assign it to the
|
|
402
|
-
# flattened histmat.
|
|
403
|
-
if len(xy) == 0:
|
|
404
|
-
return zeros(nbin-2, int), edges
|
|
405
|
-
|
|
406
|
-
flatcount = bincount(xy, weights)
|
|
407
|
-
a = arange(len(flatcount))
|
|
408
|
-
hist[a] = flatcount
|
|
409
|
-
|
|
410
|
-
# Shape into a proper matrix
|
|
411
|
-
hist = hist.reshape(sort(nbin))
|
|
412
|
-
for i in arange(nbin.size):
|
|
413
|
-
j = ni.argsort()[i]
|
|
414
|
-
hist = hist.swapaxes(i, j)
|
|
415
|
-
ni[i], ni[j] = ni[j], ni[i]
|
|
416
|
-
|
|
417
|
-
# Remove outliers (indices 0 and -1 for each dimension).
|
|
418
|
-
core = D*[slice(1, -1)]
|
|
419
|
-
hist = hist[core]
|
|
420
|
-
|
|
421
|
-
# Normalize if normed is True
|
|
422
|
-
if normed:
|
|
423
|
-
s = hist.sum()
|
|
424
|
-
for i in arange(D):
|
|
425
|
-
shape = ones(D, int)
|
|
426
|
-
shape[i] = nbin[i] - 2
|
|
427
|
-
hist = hist / dedges[i].reshape(shape)
|
|
428
|
-
hist /= s
|
|
429
|
-
|
|
430
|
-
if (hist.shape != nbin - 2).any():
|
|
431
|
-
raise RuntimeError(
|
|
432
|
-
"Internal Shape Error")
|
|
433
|
-
return hist, edges
|
|
434
|
-
|
|
435
|
-
|
|
436
|
-
def average(a, axis=None, weights=None, returned=False):
|
|
437
|
-
"""
|
|
438
|
-
Compute the weighted average along the specified axis.
|
|
439
|
-
|
|
440
|
-
Parameters
|
|
441
|
-
----------
|
|
442
|
-
a : array_like
|
|
443
|
-
Array containing data to be averaged. If `a` is not an array, a
|
|
444
|
-
conversion is attempted.
|
|
445
|
-
axis : int, optional
|
|
446
|
-
Axis along which to average `a`. If `None`, averaging is done over
|
|
447
|
-
the flattened array.
|
|
448
|
-
weights : array_like, optional
|
|
449
|
-
An array of weights associated with the values in `a`. Each value in
|
|
450
|
-
`a` contributes to the average according to its associated weight.
|
|
451
|
-
The weights array can either be 1-D (in which case its length must be
|
|
452
|
-
the size of `a` along the given axis) or of the same shape as `a`.
|
|
453
|
-
If `weights=None`, then all data in `a` are assumed to have a
|
|
454
|
-
weight equal to one.
|
|
455
|
-
returned : bool, optional
|
|
456
|
-
Default is `False`. If `True`, the tuple (`average`, `sum_of_weights`)
|
|
457
|
-
is returned, otherwise only the average is returned.
|
|
458
|
-
If `weights=None`, `sum_of_weights` is equivalent to the number of
|
|
459
|
-
elements over which the average is taken.
|
|
460
|
-
|
|
461
|
-
|
|
462
|
-
Returns
|
|
463
|
-
-------
|
|
464
|
-
average, [sum_of_weights] : {array_type, double}
|
|
465
|
-
Return the average along the specified axis. When returned is `True`,
|
|
466
|
-
return a tuple with the average as the first element and the sum
|
|
467
|
-
of the weights as the second element. The return type is `Float`
|
|
468
|
-
if `a` is of integer type, otherwise it is of the same type as `a`.
|
|
469
|
-
`sum_of_weights` is of the same type as `average`.
|
|
470
|
-
|
|
471
|
-
Raises
|
|
472
|
-
------
|
|
473
|
-
ZeroDivisionError
|
|
474
|
-
When all weights along axis are zero. See `numpy.ma.average` for a
|
|
475
|
-
version robust to this type of error.
|
|
476
|
-
TypeError
|
|
477
|
-
When the length of 1D `weights` is not the same as the shape of `a`
|
|
478
|
-
along axis.
|
|
479
|
-
|
|
480
|
-
See Also
|
|
481
|
-
--------
|
|
482
|
-
mean
|
|
483
|
-
|
|
484
|
-
ma.average : average for masked arrays -- useful if your data contains
|
|
485
|
-
"missing" values
|
|
486
|
-
|
|
487
|
-
Examples
|
|
488
|
-
--------
|
|
489
|
-
>>> data = range(1,5)
|
|
490
|
-
>>> data
|
|
491
|
-
[1, 2, 3, 4]
|
|
492
|
-
>>> np.average(data)
|
|
493
|
-
2.5
|
|
494
|
-
>>> np.average(range(1,11), weights=range(10,0,-1))
|
|
495
|
-
4.0
|
|
496
|
-
|
|
497
|
-
>>> data = np.arange(6).reshape((3,2))
|
|
498
|
-
>>> data
|
|
499
|
-
array([[0, 1],
|
|
500
|
-
[2, 3],
|
|
501
|
-
[4, 5]])
|
|
502
|
-
>>> np.average(data, axis=1, weights=[1./4, 3./4])
|
|
503
|
-
array([ 0.75, 2.75, 4.75])
|
|
504
|
-
>>> np.average(data, weights=[1./4, 3./4])
|
|
505
|
-
Traceback (most recent call last):
|
|
506
|
-
...
|
|
507
|
-
TypeError: Axis must be specified when shapes of a and weights differ.
|
|
508
|
-
|
|
509
|
-
"""
|
|
510
|
-
if not isinstance(a, np.matrix):
|
|
511
|
-
a = np.asarray(a)
|
|
512
|
-
|
|
513
|
-
if weights is None:
|
|
514
|
-
avg = a.mean(axis)
|
|
515
|
-
scl = avg.dtype.type(a.size/avg.size)
|
|
516
|
-
else:
|
|
517
|
-
a = a + 0.0
|
|
518
|
-
wgt = np.array(weights, dtype=a.dtype, copy=0)
|
|
519
|
-
|
|
520
|
-
# Sanity checks
|
|
521
|
-
if a.shape != wgt.shape:
|
|
522
|
-
if axis is None:
|
|
523
|
-
raise TypeError(
|
|
524
|
-
"Axis must be specified when shapes of a and weights "
|
|
525
|
-
"differ.")
|
|
526
|
-
if wgt.ndim != 1:
|
|
527
|
-
raise TypeError(
|
|
528
|
-
"1D weights expected when shapes of a and weights differ.")
|
|
529
|
-
if wgt.shape[0] != a.shape[axis]:
|
|
530
|
-
raise ValueError(
|
|
531
|
-
"Length of weights not compatible with specified axis.")
|
|
532
|
-
|
|
533
|
-
# setup wgt to broadcast along axis
|
|
534
|
-
wgt = np.array(wgt, copy=0, ndmin=a.ndim).swapaxes(-1, axis)
|
|
535
|
-
|
|
536
|
-
scl = wgt.sum(axis=axis)
|
|
537
|
-
if (scl == 0.0).any():
|
|
538
|
-
raise ZeroDivisionError(
|
|
539
|
-
"Weights sum to zero, can't be normalized")
|
|
540
|
-
|
|
541
|
-
avg = np.multiply(a, wgt).sum(axis)/scl
|
|
542
|
-
|
|
543
|
-
if returned:
|
|
544
|
-
scl = np.multiply(avg, 0) + scl
|
|
545
|
-
return avg, scl
|
|
546
|
-
else:
|
|
547
|
-
return avg
|
|
548
|
-
|
|
549
|
-
|
|
550
|
-
def asarray_chkfinite(a, dtype=None, order=None):
|
|
551
|
-
"""
|
|
552
|
-
Convert the input to an array, checking for NaNs or Infs.
|
|
553
|
-
|
|
554
|
-
Parameters
|
|
555
|
-
----------
|
|
556
|
-
a : array_like
|
|
557
|
-
Input data, in any form that can be converted to an array. This
|
|
558
|
-
includes lists, lists of tuples, tuples, tuples of tuples, tuples
|
|
559
|
-
of lists and ndarrays. Success requires no NaNs or Infs.
|
|
560
|
-
dtype : data-type, optional
|
|
561
|
-
By default, the data-type is inferred from the input data.
|
|
562
|
-
order : {'C', 'F'}, optional
|
|
563
|
-
Whether to use row-major ('C') or column-major ('FORTRAN') memory
|
|
564
|
-
representation. Defaults to 'C'.
|
|
565
|
-
|
|
566
|
-
Returns
|
|
567
|
-
-------
|
|
568
|
-
out : ndarray
|
|
569
|
-
Array interpretation of `a`. No copy is performed if the input
|
|
570
|
-
is already an ndarray. If `a` is a subclass of ndarray, a base
|
|
571
|
-
class ndarray is returned.
|
|
572
|
-
|
|
573
|
-
Raises
|
|
574
|
-
------
|
|
575
|
-
ValueError
|
|
576
|
-
Raises ValueError if `a` contains NaN (Not a Number) or Inf (Infinity).
|
|
577
|
-
|
|
578
|
-
See Also
|
|
579
|
-
--------
|
|
580
|
-
asarray : Create and array.
|
|
581
|
-
asanyarray : Similar function which passes through subclasses.
|
|
582
|
-
ascontiguousarray : Convert input to a contiguous array.
|
|
583
|
-
asfarray : Convert input to a floating point ndarray.
|
|
584
|
-
asfortranarray : Convert input to an ndarray with column-major
|
|
585
|
-
memory order.
|
|
586
|
-
fromiter : Create an array from an iterator.
|
|
587
|
-
fromfunction : Construct an array by executing a function on grid
|
|
588
|
-
positions.
|
|
589
|
-
|
|
590
|
-
Examples
|
|
591
|
-
--------
|
|
592
|
-
Convert a list into an array. If all elements are finite
|
|
593
|
-
``asarray_chkfinite`` is identical to ``asarray``.
|
|
594
|
-
|
|
595
|
-
>>> a = [1, 2]
|
|
596
|
-
>>> np.asarray_chkfinite(a, dtype=float)
|
|
597
|
-
array([1., 2.])
|
|
598
|
-
|
|
599
|
-
Raises ValueError if array_like contains Nans or Infs.
|
|
600
|
-
|
|
601
|
-
>>> a = [1, 2, np.inf]
|
|
602
|
-
>>> try:
|
|
603
|
-
... np.asarray_chkfinite(a)
|
|
604
|
-
... except ValueError:
|
|
605
|
-
... print 'ValueError'
|
|
606
|
-
...
|
|
607
|
-
ValueError
|
|
608
|
-
|
|
609
|
-
"""
|
|
610
|
-
a = asarray(a, dtype=dtype, order=order)
|
|
611
|
-
if a.dtype.char in typecodes['AllFloat'] and not np.isfinite(a).all():
|
|
612
|
-
raise ValueError(
|
|
613
|
-
"array must not contain infs or NaNs")
|
|
614
|
-
return a
|
|
615
|
-
|
|
616
|
-
|
|
617
|
-
def piecewise(x, condlist, funclist, *args, **kw):
|
|
618
|
-
"""
|
|
619
|
-
Evaluate a piecewise-defined function.
|
|
620
|
-
|
|
621
|
-
Given a set of conditions and corresponding functions, evaluate each
|
|
622
|
-
function on the input data wherever its condition is true.
|
|
623
|
-
|
|
624
|
-
Parameters
|
|
625
|
-
----------
|
|
626
|
-
x : ndarray
|
|
627
|
-
The input domain.
|
|
628
|
-
condlist : list of bool arrays
|
|
629
|
-
Each boolean array corresponds to a function in `funclist`. Wherever
|
|
630
|
-
`condlist[i]` is True, `funclist[i](x)` is used as the output value.
|
|
631
|
-
|
|
632
|
-
Each boolean array in `condlist` selects a piece of `x`,
|
|
633
|
-
and should therefore be of the same shape as `x`.
|
|
634
|
-
|
|
635
|
-
The length of `condlist` must correspond to that of `funclist`.
|
|
636
|
-
If one extra function is given, i.e. if
|
|
637
|
-
``len(funclist) - len(condlist) == 1``, then that extra function
|
|
638
|
-
is the default value, used wherever all conditions are false.
|
|
639
|
-
funclist : list of callables, f(x,*args,**kw), or scalars
|
|
640
|
-
Each function is evaluated over `x` wherever its corresponding
|
|
641
|
-
condition is True. It should take an array as input and give an array
|
|
642
|
-
or a scalar value as output. If, instead of a callable,
|
|
643
|
-
a scalar is provided then a constant function (``lambda x: scalar``) is
|
|
644
|
-
assumed.
|
|
645
|
-
args : tuple, optional
|
|
646
|
-
Any further arguments given to `piecewise` are passed to the functions
|
|
647
|
-
upon execution, i.e., if called ``piecewise(..., ..., 1, 'a')``, then
|
|
648
|
-
each function is called as ``f(x, 1, 'a')``.
|
|
649
|
-
kw : dict, optional
|
|
650
|
-
Keyword arguments used in calling `piecewise` are passed to the
|
|
651
|
-
functions upon execution, i.e., if called
|
|
652
|
-
``piecewise(..., ..., lambda=1)``, then each function is called as
|
|
653
|
-
``f(x, lambda=1)``.
|
|
654
|
-
|
|
655
|
-
Returns
|
|
656
|
-
-------
|
|
657
|
-
out : ndarray
|
|
658
|
-
The output is the same shape and type as x and is found by
|
|
659
|
-
calling the functions in `funclist` on the appropriate portions of `x`,
|
|
660
|
-
as defined by the boolean arrays in `condlist`. Portions not covered
|
|
661
|
-
by any condition have a default value of 0.
|
|
662
|
-
|
|
663
|
-
|
|
664
|
-
See Also
|
|
665
|
-
--------
|
|
666
|
-
choose, select, where
|
|
667
|
-
|
|
668
|
-
Notes
|
|
669
|
-
-----
|
|
670
|
-
This is similar to choose or select, except that functions are
|
|
671
|
-
evaluated on elements of `x` that satisfy the corresponding condition from
|
|
672
|
-
`condlist`.
|
|
673
|
-
|
|
674
|
-
The result is::
|
|
675
|
-
|
|
676
|
-
|--
|
|
677
|
-
|funclist[0](x[condlist[0]])
|
|
678
|
-
out = |funclist[1](x[condlist[1]])
|
|
679
|
-
|...
|
|
680
|
-
|funclist[n2](x[condlist[n2]])
|
|
681
|
-
|--
|
|
682
|
-
|
|
683
|
-
Examples
|
|
684
|
-
--------
|
|
685
|
-
Define the sigma function, which is -1 for ``x < 0`` and +1 for ``x >= 0``.
|
|
686
|
-
|
|
687
|
-
>>> x = np.linspace(-2.5, 2.5, 6)
|
|
688
|
-
>>> np.piecewise(x, [x < 0, x >= 0], [-1, 1])
|
|
689
|
-
array([-1., -1., -1., 1., 1., 1.])
|
|
690
|
-
|
|
691
|
-
Define the absolute value, which is ``-x`` for ``x <0`` and ``x`` for
|
|
692
|
-
``x >= 0``.
|
|
693
|
-
|
|
694
|
-
>>> np.piecewise(x, [x < 0, x >= 0], [lambda x: -x, lambda x: x])
|
|
695
|
-
array([ 2.5, 1.5, 0.5, 0.5, 1.5, 2.5])
|
|
696
|
-
|
|
697
|
-
"""
|
|
698
|
-
x = asanyarray(x)
|
|
699
|
-
n2 = len(funclist)
|
|
700
|
-
if (isscalar(condlist) or not (isinstance(condlist[0], list) or
|
|
701
|
-
isinstance(condlist[0], ndarray))):
|
|
702
|
-
condlist = [condlist]
|
|
703
|
-
condlist = array(condlist, dtype=bool)
|
|
704
|
-
n = len(condlist)
|
|
705
|
-
# This is a hack to work around problems with NumPy's
|
|
706
|
-
# handling of 0-d arrays and boolean indexing with
|
|
707
|
-
# numpy.bool_ scalars
|
|
708
|
-
zerod = False
|
|
709
|
-
if x.ndim == 0:
|
|
710
|
-
x = x[None]
|
|
711
|
-
zerod = True
|
|
712
|
-
if condlist.shape[-1] != 1:
|
|
713
|
-
condlist = condlist.T
|
|
714
|
-
if n == n2 - 1: # compute the "otherwise" condition.
|
|
715
|
-
totlist = np.logical_or.reduce(condlist, axis=0)
|
|
716
|
-
condlist = np.vstack([condlist, ~totlist])
|
|
717
|
-
n += 1
|
|
718
|
-
if (n != n2):
|
|
719
|
-
raise ValueError(
|
|
720
|
-
"function list and condition list must be the same")
|
|
721
|
-
|
|
722
|
-
y = zeros(x.shape, x.dtype)
|
|
723
|
-
for k in range(n):
|
|
724
|
-
item = funclist[k]
|
|
725
|
-
if not isinstance(item, collections.Callable):
|
|
726
|
-
y[condlist[k]] = item
|
|
727
|
-
else:
|
|
728
|
-
vals = x[condlist[k]]
|
|
729
|
-
if vals.size > 0:
|
|
730
|
-
y[condlist[k]] = item(vals, *args, **kw)
|
|
731
|
-
if zerod:
|
|
732
|
-
y = y.squeeze()
|
|
733
|
-
return y
|
|
734
|
-
|
|
735
|
-
|
|
736
|
-
def select(condlist, choicelist, default=0):
|
|
737
|
-
"""
|
|
738
|
-
Return an array drawn from elements in choicelist, depending on conditions.
|
|
739
|
-
|
|
740
|
-
Parameters
|
|
741
|
-
----------
|
|
742
|
-
condlist : list of bool ndarrays
|
|
743
|
-
The list of conditions which determine from which array in `choicelist`
|
|
744
|
-
the output elements are taken. When multiple conditions are satisfied,
|
|
745
|
-
the first one encountered in `condlist` is used.
|
|
746
|
-
choicelist : list of ndarrays
|
|
747
|
-
The list of arrays from which the output elements are taken. It has
|
|
748
|
-
to be of the same length as `condlist`.
|
|
749
|
-
default : scalar, optional
|
|
750
|
-
The element inserted in `output` when all conditions evaluate to False.
|
|
751
|
-
|
|
752
|
-
Returns
|
|
753
|
-
-------
|
|
754
|
-
output : ndarray
|
|
755
|
-
The output at position m is the m-th element of the array in
|
|
756
|
-
`choicelist` where the m-th element of the corresponding array in
|
|
757
|
-
`condlist` is True.
|
|
758
|
-
|
|
759
|
-
See Also
|
|
760
|
-
--------
|
|
761
|
-
where : Return elements from one of two arrays depending on condition.
|
|
762
|
-
take, choose, compress, diag, diagonal
|
|
763
|
-
|
|
764
|
-
Examples
|
|
765
|
-
--------
|
|
766
|
-
>>> x = np.arange(10)
|
|
767
|
-
>>> condlist = [x<3, x>5]
|
|
768
|
-
>>> choicelist = [x, x**2]
|
|
769
|
-
>>> np.select(condlist, choicelist)
|
|
770
|
-
array([ 0, 1, 2, 0, 0, 0, 36, 49, 64, 81])
|
|
771
|
-
|
|
772
|
-
"""
|
|
773
|
-
# Check the size of condlist and choicelist are the same, or abort.
|
|
774
|
-
if len(condlist) != len(choicelist):
|
|
775
|
-
raise ValueError(
|
|
776
|
-
'list of cases must be same length as list of conditions')
|
|
777
|
-
|
|
778
|
-
# Now that the dtype is known, handle the deprecated select([], []) case
|
|
779
|
-
if len(condlist) == 0:
|
|
780
|
-
warnings.warn("select with an empty condition list is not possible"
|
|
781
|
-
"and will be deprecated",
|
|
782
|
-
DeprecationWarning)
|
|
783
|
-
return np.asarray(default)[()]
|
|
784
|
-
|
|
785
|
-
choicelist = [np.asarray(choice) for choice in choicelist]
|
|
786
|
-
choicelist.append(np.asarray(default))
|
|
787
|
-
|
|
788
|
-
# need to get the result type before broadcasting for correct scalar
|
|
789
|
-
# behaviour
|
|
790
|
-
dtype = np.result_type(*choicelist)
|
|
791
|
-
|
|
792
|
-
# Convert conditions to arrays and broadcast conditions and choices
|
|
793
|
-
# as the shape is needed for the result. Doing it seperatly optimizes
|
|
794
|
-
# for example when all choices are scalars.
|
|
795
|
-
condlist = np.broadcast_arrays(*condlist)
|
|
796
|
-
choicelist = np.broadcast_arrays(*choicelist)
|
|
797
|
-
|
|
798
|
-
# If cond array is not an ndarray in boolean format or scalar bool, abort.
|
|
799
|
-
deprecated_ints = False
|
|
800
|
-
for i in range(len(condlist)):
|
|
801
|
-
cond = condlist[i]
|
|
802
|
-
if cond.dtype.type is not np.bool_:
|
|
803
|
-
if np.issubdtype(cond.dtype, np.integer):
|
|
804
|
-
# A previous implementation accepted int ndarrays accidentally.
|
|
805
|
-
# Supported here deliberately, but deprecated.
|
|
806
|
-
condlist[i] = condlist[i].astype(bool)
|
|
807
|
-
deprecated_ints = True
|
|
808
|
-
else:
|
|
809
|
-
raise ValueError(
|
|
810
|
-
'invalid entry in choicelist: should be boolean ndarray')
|
|
811
|
-
|
|
812
|
-
if deprecated_ints:
|
|
813
|
-
msg = "select condlists containing integer ndarrays is deprecated " \
|
|
814
|
-
"and will be removed in the future. Use `.astype(bool)` to " \
|
|
815
|
-
"convert to bools."
|
|
816
|
-
warnings.warn(msg, DeprecationWarning)
|
|
817
|
-
|
|
818
|
-
if choicelist[0].ndim == 0:
|
|
819
|
-
# This may be common, so avoid the call.
|
|
820
|
-
result_shape = condlist[0].shape
|
|
821
|
-
else:
|
|
822
|
-
result_shape = np.broadcast_arrays(condlist[0], choicelist[0])[0].shape
|
|
823
|
-
|
|
824
|
-
result = np.full(result_shape, choicelist[-1], dtype)
|
|
825
|
-
|
|
826
|
-
# Use np.copyto to burn each choicelist array onto result, using the
|
|
827
|
-
# corresponding condlist as a boolean mask. This is done in reverse
|
|
828
|
-
# order since the first choice should take precedence.
|
|
829
|
-
choicelist = choicelist[-2::-1]
|
|
830
|
-
condlist = condlist[::-1]
|
|
831
|
-
for choice, cond in zip(choicelist, condlist):
|
|
832
|
-
np.copyto(result, choice, where=cond)
|
|
833
|
-
|
|
834
|
-
return result
|
|
835
|
-
|
|
836
|
-
|
|
837
|
-
def copy(a, order='K'):
|
|
838
|
-
"""
|
|
839
|
-
Return an array copy of the given object.
|
|
840
|
-
|
|
841
|
-
Parameters
|
|
842
|
-
----------
|
|
843
|
-
a : array_like
|
|
844
|
-
Input data.
|
|
845
|
-
order : {'C', 'F', 'A', 'K'}, optional
|
|
846
|
-
Controls the memory layout of the copy. 'C' means C-order,
|
|
847
|
-
'F' means F-order, 'A' means 'F' if `a` is Fortran contiguous,
|
|
848
|
-
'C' otherwise. 'K' means match the layout of `a` as closely
|
|
849
|
-
as possible. (Note that this function and :meth:ndarray.copy are very
|
|
850
|
-
similar, but have different default values for their order=
|
|
851
|
-
arguments.)
|
|
852
|
-
|
|
853
|
-
Returns
|
|
854
|
-
-------
|
|
855
|
-
arr : ndarray
|
|
856
|
-
Array interpretation of `a`.
|
|
857
|
-
|
|
858
|
-
Notes
|
|
859
|
-
-----
|
|
860
|
-
This is equivalent to
|
|
861
|
-
|
|
862
|
-
>>> np.array(a, copy=True) #doctest: +SKIP
|
|
863
|
-
|
|
864
|
-
Examples
|
|
865
|
-
--------
|
|
866
|
-
Create an array x, with a reference y and a copy z:
|
|
867
|
-
|
|
868
|
-
>>> x = np.array([1, 2, 3])
|
|
869
|
-
>>> y = x
|
|
870
|
-
>>> z = np.copy(x)
|
|
871
|
-
|
|
872
|
-
Note that, when we modify x, y changes, but not z:
|
|
873
|
-
|
|
874
|
-
>>> x[0] = 10
|
|
875
|
-
>>> x[0] == y[0]
|
|
876
|
-
True
|
|
877
|
-
>>> x[0] == z[0]
|
|
878
|
-
False
|
|
879
|
-
|
|
880
|
-
"""
|
|
881
|
-
return array(a, order=order, copy=True)
|
|
882
|
-
|
|
883
|
-
# Basic operations
|
|
884
|
-
|
|
885
|
-
|
|
886
|
-
def gradient(f, *varargs, **kwargs):
|
|
887
|
-
"""
|
|
888
|
-
Return the gradient of an N-dimensional array.
|
|
889
|
-
|
|
890
|
-
The gradient is computed using second order accurate central differences
|
|
891
|
-
in the interior and either first differences or second order accurate
|
|
892
|
-
one-sides (forward or backwards) differences at the boundaries. The
|
|
893
|
-
returned gradient hence has the same shape as the input array.
|
|
894
|
-
|
|
895
|
-
Parameters
|
|
896
|
-
----------
|
|
897
|
-
f : array_like
|
|
898
|
-
An N-dimensional array containing samples of a scalar function.
|
|
899
|
-
varargs : list of scalar, optional
|
|
900
|
-
N scalars specifying the sample distances for each dimension,
|
|
901
|
-
i.e. `dx`, `dy`, `dz`, ... Default distance: 1.
|
|
902
|
-
edge_order : {1, 2}, optional
|
|
903
|
-
Gradient is calculated using N\ :sup:`th` order accurate differences
|
|
904
|
-
at the boundaries. Default: 1.
|
|
905
|
-
|
|
906
|
-
.. versionadded:: 1.9.1
|
|
907
|
-
|
|
908
|
-
Returns
|
|
909
|
-
-------
|
|
910
|
-
gradient : ndarray
|
|
911
|
-
N arrays of the same shape as `f` giving the derivative of `f` with
|
|
912
|
-
respect to each dimension.
|
|
913
|
-
|
|
914
|
-
Examples
|
|
915
|
-
--------
|
|
916
|
-
>>> x = np.array([1, 2, 4, 7, 11, 16], dtype=np.float)
|
|
917
|
-
>>> np.gradient(x)
|
|
918
|
-
array([ 1. , 1.5, 2.5, 3.5, 4.5, 5. ])
|
|
919
|
-
>>> np.gradient(x, 2)
|
|
920
|
-
array([ 0.5 , 0.75, 1.25, 1.75, 2.25, 2.5 ])
|
|
921
|
-
|
|
922
|
-
>>> np.gradient(np.array([[1, 2, 6], [3, 4, 5]], dtype=np.float))
|
|
923
|
-
[array([[ 2., 2., -1.],
|
|
924
|
-
[ 2., 2., -1.]]), array([[ 1. , 2.5, 4. ],
|
|
925
|
-
[ 1. , 1. , 1. ]])]
|
|
926
|
-
|
|
927
|
-
>>> x = np.array([0, 1, 2, 3, 4])
|
|
928
|
-
>>> dx = np.gradient(x)
|
|
929
|
-
>>> y = x**2
|
|
930
|
-
>>> np.gradient(y, dx, edge_order=2)
|
|
931
|
-
array([-0., 2., 4., 6., 8.])
|
|
932
|
-
"""
|
|
933
|
-
f = np.asanyarray(f)
|
|
934
|
-
N = len(f.shape) # number of dimensions
|
|
935
|
-
n = len(varargs)
|
|
936
|
-
if n == 0:
|
|
937
|
-
dx = [1.0]*N
|
|
938
|
-
elif n == 1:
|
|
939
|
-
dx = [varargs[0]]*N
|
|
940
|
-
elif n == N:
|
|
941
|
-
dx = list(varargs)
|
|
942
|
-
else:
|
|
943
|
-
raise SyntaxError(
|
|
944
|
-
"invalid number of arguments")
|
|
945
|
-
|
|
946
|
-
edge_order = kwargs.pop('edge_order', 1)
|
|
947
|
-
if kwargs:
|
|
948
|
-
raise TypeError('"{}" are not valid keyword arguments.'.format(
|
|
949
|
-
'", "'.join(kwargs.keys())))
|
|
950
|
-
if edge_order > 2:
|
|
951
|
-
raise ValueError("'edge_order' greater than 2 not supported")
|
|
952
|
-
|
|
953
|
-
# use central differences on interior and one-sided differences on the
|
|
954
|
-
# endpoints. This preserves second order-accuracy over the full domain.
|
|
955
|
-
|
|
956
|
-
outvals = []
|
|
957
|
-
|
|
958
|
-
# create slice objects --- initially all are [:, :, ..., :]
|
|
959
|
-
slice1 = [slice(None)]*N
|
|
960
|
-
slice2 = [slice(None)]*N
|
|
961
|
-
slice3 = [slice(None)]*N
|
|
962
|
-
slice4 = [slice(None)]*N
|
|
963
|
-
|
|
964
|
-
otype = f.dtype.char
|
|
965
|
-
if otype not in ['f', 'd', 'F', 'D', 'm', 'M']:
|
|
966
|
-
otype = 'd'
|
|
967
|
-
|
|
968
|
-
# Difference of datetime64 elements results in timedelta64
|
|
969
|
-
if otype == 'M':
|
|
970
|
-
# Need to use the full dtype name because it contains unit information
|
|
971
|
-
otype = f.dtype.name.replace('datetime', 'timedelta')
|
|
972
|
-
elif otype == 'm':
|
|
973
|
-
# Needs to keep the specific units, can't be a general unit
|
|
974
|
-
otype = f.dtype
|
|
975
|
-
|
|
976
|
-
# Convert datetime64 data into ints. Make dummy variable `y`
|
|
977
|
-
# that is a view of ints if the data is datetime64, otherwise
|
|
978
|
-
# just set y equal to the the array `f`.
|
|
979
|
-
if f.dtype.char in ["M", "m"]:
|
|
980
|
-
y = f.view('int64')
|
|
981
|
-
else:
|
|
982
|
-
y = f
|
|
983
|
-
|
|
984
|
-
for axis in range(N):
|
|
985
|
-
|
|
986
|
-
if y.shape[axis] < 2:
|
|
987
|
-
raise ValueError(
|
|
988
|
-
"Shape of array too small to calculate a numerical gradient, "
|
|
989
|
-
"at least two elements are required.")
|
|
990
|
-
|
|
991
|
-
# Numerical differentiation: 1st order edges, 2nd order interior
|
|
992
|
-
if y.shape[axis] == 2 or edge_order == 1:
|
|
993
|
-
# Use first order differences for time data
|
|
994
|
-
out = np.empty_like(y, dtype=otype)
|
|
995
|
-
|
|
996
|
-
slice1[axis] = slice(1, -1)
|
|
997
|
-
slice2[axis] = slice(2, None)
|
|
998
|
-
slice3[axis] = slice(None, -2)
|
|
999
|
-
# 1D equivalent -- out[1:-1] = (y[2:] - y[:-2])/2.0
|
|
1000
|
-
out[slice1] = (y[slice2] - y[slice3])/2.0
|
|
1001
|
-
|
|
1002
|
-
slice1[axis] = 0
|
|
1003
|
-
slice2[axis] = 1
|
|
1004
|
-
slice3[axis] = 0
|
|
1005
|
-
# 1D equivalent -- out[0] = (y[1] - y[0])
|
|
1006
|
-
out[slice1] = (y[slice2] - y[slice3])
|
|
1007
|
-
|
|
1008
|
-
slice1[axis] = -1
|
|
1009
|
-
slice2[axis] = -1
|
|
1010
|
-
slice3[axis] = -2
|
|
1011
|
-
# 1D equivalent -- out[-1] = (y[-1] - y[-2])
|
|
1012
|
-
out[slice1] = (y[slice2] - y[slice3])
|
|
1013
|
-
|
|
1014
|
-
# Numerical differentiation: 2st order edges, 2nd order interior
|
|
1015
|
-
else:
|
|
1016
|
-
# Use second order differences where possible
|
|
1017
|
-
out = np.empty_like(y, dtype=otype)
|
|
1018
|
-
|
|
1019
|
-
slice1[axis] = slice(1, -1)
|
|
1020
|
-
slice2[axis] = slice(2, None)
|
|
1021
|
-
slice3[axis] = slice(None, -2)
|
|
1022
|
-
# 1D equivalent -- out[1:-1] = (y[2:] - y[:-2])/2.0
|
|
1023
|
-
out[slice1] = (y[slice2] - y[slice3])/2.0
|
|
1024
|
-
|
|
1025
|
-
slice1[axis] = 0
|
|
1026
|
-
slice2[axis] = 0
|
|
1027
|
-
slice3[axis] = 1
|
|
1028
|
-
slice4[axis] = 2
|
|
1029
|
-
# 1D equivalent -- out[0] = -(3*y[0] - 4*y[1] + y[2]) / 2.0
|
|
1030
|
-
out[slice1] = -(3.0*y[slice2] - 4.0*y[slice3] + y[slice4])/2.0
|
|
1031
|
-
|
|
1032
|
-
slice1[axis] = -1
|
|
1033
|
-
slice2[axis] = -1
|
|
1034
|
-
slice3[axis] = -2
|
|
1035
|
-
slice4[axis] = -3
|
|
1036
|
-
# 1D equivalent -- out[-1] = (3*y[-1] - 4*y[-2] + y[-3])
|
|
1037
|
-
out[slice1] = (3.0*y[slice2] - 4.0*y[slice3] + y[slice4])/2.0
|
|
1038
|
-
|
|
1039
|
-
# divide by step size
|
|
1040
|
-
out /= dx[axis]
|
|
1041
|
-
outvals.append(out)
|
|
1042
|
-
|
|
1043
|
-
# reset the slice object in this dimension to ":"
|
|
1044
|
-
slice1[axis] = slice(None)
|
|
1045
|
-
slice2[axis] = slice(None)
|
|
1046
|
-
slice3[axis] = slice(None)
|
|
1047
|
-
slice4[axis] = slice(None)
|
|
1048
|
-
|
|
1049
|
-
if N == 1:
|
|
1050
|
-
return outvals[0]
|
|
1051
|
-
else:
|
|
1052
|
-
return outvals
|
|
1053
|
-
|
|
1054
|
-
|
|
1055
|
-
def diff(a, n=1, axis=-1):
|
|
1056
|
-
"""
|
|
1057
|
-
Calculate the n-th order discrete difference along given axis.
|
|
1058
|
-
|
|
1059
|
-
The first order difference is given by ``out[n] = a[n+1] - a[n]`` along
|
|
1060
|
-
the given axis, higher order differences are calculated by using `diff`
|
|
1061
|
-
recursively.
|
|
1062
|
-
|
|
1063
|
-
Parameters
|
|
1064
|
-
----------
|
|
1065
|
-
a : array_like
|
|
1066
|
-
Input array
|
|
1067
|
-
n : int, optional
|
|
1068
|
-
The number of times values are differenced.
|
|
1069
|
-
axis : int, optional
|
|
1070
|
-
The axis along which the difference is taken, default is the last axis.
|
|
1071
|
-
|
|
1072
|
-
Returns
|
|
1073
|
-
-------
|
|
1074
|
-
diff : ndarray
|
|
1075
|
-
The `n` order differences. The shape of the output is the same as `a`
|
|
1076
|
-
except along `axis` where the dimension is smaller by `n`.
|
|
1077
|
-
|
|
1078
|
-
See Also
|
|
1079
|
-
--------
|
|
1080
|
-
gradient, ediff1d, cumsum
|
|
1081
|
-
|
|
1082
|
-
Examples
|
|
1083
|
-
--------
|
|
1084
|
-
>>> x = np.array([1, 2, 4, 7, 0])
|
|
1085
|
-
>>> np.diff(x)
|
|
1086
|
-
array([ 1, 2, 3, -7])
|
|
1087
|
-
>>> np.diff(x, n=2)
|
|
1088
|
-
array([ 1, 1, -10])
|
|
1089
|
-
|
|
1090
|
-
>>> x = np.array([[1, 3, 6, 10], [0, 5, 6, 8]])
|
|
1091
|
-
>>> np.diff(x)
|
|
1092
|
-
array([[2, 3, 4],
|
|
1093
|
-
[5, 1, 2]])
|
|
1094
|
-
>>> np.diff(x, axis=0)
|
|
1095
|
-
array([[-1, 2, 0, -2]])
|
|
1096
|
-
|
|
1097
|
-
"""
|
|
1098
|
-
if n == 0:
|
|
1099
|
-
return a
|
|
1100
|
-
if n < 0:
|
|
1101
|
-
raise ValueError(
|
|
1102
|
-
"order must be non-negative but got " + repr(n))
|
|
1103
|
-
a = asanyarray(a)
|
|
1104
|
-
nd = len(a.shape)
|
|
1105
|
-
slice1 = [slice(None)]*nd
|
|
1106
|
-
slice2 = [slice(None)]*nd
|
|
1107
|
-
slice1[axis] = slice(1, None)
|
|
1108
|
-
slice2[axis] = slice(None, -1)
|
|
1109
|
-
slice1 = tuple(slice1)
|
|
1110
|
-
slice2 = tuple(slice2)
|
|
1111
|
-
if n > 1:
|
|
1112
|
-
return diff(a[slice1]-a[slice2], n-1, axis=axis)
|
|
1113
|
-
else:
|
|
1114
|
-
return a[slice1]-a[slice2]
|
|
1115
|
-
|
|
1116
|
-
|
|
1117
|
-
def interp(x, xp, fp, left=None, right=None):
|
|
1118
|
-
"""
|
|
1119
|
-
One-dimensional linear interpolation.
|
|
1120
|
-
|
|
1121
|
-
Returns the one-dimensional piecewise linear interpolant to a function
|
|
1122
|
-
with given values at discrete data-points.
|
|
1123
|
-
|
|
1124
|
-
Parameters
|
|
1125
|
-
----------
|
|
1126
|
-
x : array_like
|
|
1127
|
-
The x-coordinates of the interpolated values.
|
|
1128
|
-
|
|
1129
|
-
xp : 1-D sequence of floats
|
|
1130
|
-
The x-coordinates of the data points, must be increasing.
|
|
1131
|
-
|
|
1132
|
-
fp : 1-D sequence of floats
|
|
1133
|
-
The y-coordinates of the data points, same length as `xp`.
|
|
1134
|
-
|
|
1135
|
-
left : float, optional
|
|
1136
|
-
Value to return for `x < xp[0]`, default is `fp[0]`.
|
|
1137
|
-
|
|
1138
|
-
right : float, optional
|
|
1139
|
-
Value to return for `x > xp[-1]`, default is `fp[-1]`.
|
|
1140
|
-
|
|
1141
|
-
Returns
|
|
1142
|
-
-------
|
|
1143
|
-
y : {float, ndarray}
|
|
1144
|
-
The interpolated values, same shape as `x`.
|
|
1145
|
-
|
|
1146
|
-
Raises
|
|
1147
|
-
------
|
|
1148
|
-
ValueError
|
|
1149
|
-
If `xp` and `fp` have different length
|
|
1150
|
-
|
|
1151
|
-
Notes
|
|
1152
|
-
-----
|
|
1153
|
-
Does not check that the x-coordinate sequence `xp` is increasing.
|
|
1154
|
-
If `xp` is not increasing, the results are nonsense.
|
|
1155
|
-
A simple check for increasing is::
|
|
1156
|
-
|
|
1157
|
-
np.all(np.diff(xp) > 0)
|
|
1158
|
-
|
|
1159
|
-
|
|
1160
|
-
Examples
|
|
1161
|
-
--------
|
|
1162
|
-
>>> xp = [1, 2, 3]
|
|
1163
|
-
>>> fp = [3, 2, 0]
|
|
1164
|
-
>>> np.interp(2.5, xp, fp)
|
|
1165
|
-
1.0
|
|
1166
|
-
>>> np.interp([0, 1, 1.5, 2.72, 3.14], xp, fp)
|
|
1167
|
-
array([ 3. , 3. , 2.5 , 0.56, 0. ])
|
|
1168
|
-
>>> UNDEF = -99.0
|
|
1169
|
-
>>> np.interp(3.14, xp, fp, right=UNDEF)
|
|
1170
|
-
-99.0
|
|
1171
|
-
|
|
1172
|
-
Plot an interpolant to the sine function:
|
|
1173
|
-
|
|
1174
|
-
>>> x = np.linspace(0, 2*np.pi, 10)
|
|
1175
|
-
>>> y = np.sin(x)
|
|
1176
|
-
>>> xvals = np.linspace(0, 2*np.pi, 50)
|
|
1177
|
-
>>> yinterp = np.interp(xvals, x, y)
|
|
1178
|
-
>>> import matplotlib.pyplot as plt
|
|
1179
|
-
>>> plt.plot(x, y, 'o')
|
|
1180
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
1181
|
-
>>> plt.plot(xvals, yinterp, '-x')
|
|
1182
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
1183
|
-
>>> plt.show()
|
|
1184
|
-
|
|
1185
|
-
"""
|
|
1186
|
-
if isinstance(x, (float, int, number)):
|
|
1187
|
-
return compiled_interp([x], xp, fp, left, right).item()
|
|
1188
|
-
elif isinstance(x, np.ndarray) and x.ndim == 0:
|
|
1189
|
-
return compiled_interp([x], xp, fp, left, right).item()
|
|
1190
|
-
else:
|
|
1191
|
-
return compiled_interp(x, xp, fp, left, right)
|
|
1192
|
-
|
|
1193
|
-
|
|
1194
|
-
def angle(z, deg=0):
|
|
1195
|
-
"""
|
|
1196
|
-
Return the angle of the complex argument.
|
|
1197
|
-
|
|
1198
|
-
Parameters
|
|
1199
|
-
----------
|
|
1200
|
-
z : array_like
|
|
1201
|
-
A complex number or sequence of complex numbers.
|
|
1202
|
-
deg : bool, optional
|
|
1203
|
-
Return angle in degrees if True, radians if False (default).
|
|
1204
|
-
|
|
1205
|
-
Returns
|
|
1206
|
-
-------
|
|
1207
|
-
angle : {ndarray, scalar}
|
|
1208
|
-
The counterclockwise angle from the positive real axis on
|
|
1209
|
-
the complex plane, with dtype as numpy.float64.
|
|
1210
|
-
|
|
1211
|
-
See Also
|
|
1212
|
-
--------
|
|
1213
|
-
arctan2
|
|
1214
|
-
absolute
|
|
1215
|
-
|
|
1216
|
-
|
|
1217
|
-
|
|
1218
|
-
Examples
|
|
1219
|
-
--------
|
|
1220
|
-
>>> np.angle([1.0, 1.0j, 1+1j]) # in radians
|
|
1221
|
-
array([ 0. , 1.57079633, 0.78539816])
|
|
1222
|
-
>>> np.angle(1+1j, deg=True) # in degrees
|
|
1223
|
-
45.0
|
|
1224
|
-
|
|
1225
|
-
"""
|
|
1226
|
-
if deg:
|
|
1227
|
-
fact = 180/pi
|
|
1228
|
-
else:
|
|
1229
|
-
fact = 1.0
|
|
1230
|
-
z = asarray(z)
|
|
1231
|
-
if (issubclass(z.dtype.type, _nx.complexfloating)):
|
|
1232
|
-
zimag = z.imag
|
|
1233
|
-
zreal = z.real
|
|
1234
|
-
else:
|
|
1235
|
-
zimag = 0
|
|
1236
|
-
zreal = z
|
|
1237
|
-
return arctan2(zimag, zreal) * fact
|
|
1238
|
-
|
|
1239
|
-
|
|
1240
|
-
def unwrap(p, discont=pi, axis=-1):
|
|
1241
|
-
"""
|
|
1242
|
-
Unwrap by changing deltas between values to 2*pi complement.
|
|
1243
|
-
|
|
1244
|
-
Unwrap radian phase `p` by changing absolute jumps greater than
|
|
1245
|
-
`discont` to their 2*pi complement along the given axis.
|
|
1246
|
-
|
|
1247
|
-
Parameters
|
|
1248
|
-
----------
|
|
1249
|
-
p : array_like
|
|
1250
|
-
Input array.
|
|
1251
|
-
discont : float, optional
|
|
1252
|
-
Maximum discontinuity between values, default is ``pi``.
|
|
1253
|
-
axis : int, optional
|
|
1254
|
-
Axis along which unwrap will operate, default is the last axis.
|
|
1255
|
-
|
|
1256
|
-
Returns
|
|
1257
|
-
-------
|
|
1258
|
-
out : ndarray
|
|
1259
|
-
Output array.
|
|
1260
|
-
|
|
1261
|
-
See Also
|
|
1262
|
-
--------
|
|
1263
|
-
rad2deg, deg2rad
|
|
1264
|
-
|
|
1265
|
-
Notes
|
|
1266
|
-
-----
|
|
1267
|
-
If the discontinuity in `p` is smaller than ``pi``, but larger than
|
|
1268
|
-
`discont`, no unwrapping is done because taking the 2*pi complement
|
|
1269
|
-
would only make the discontinuity larger.
|
|
1270
|
-
|
|
1271
|
-
Examples
|
|
1272
|
-
--------
|
|
1273
|
-
>>> phase = np.linspace(0, np.pi, num=5)
|
|
1274
|
-
>>> phase[3:] += np.pi
|
|
1275
|
-
>>> phase
|
|
1276
|
-
array([ 0. , 0.78539816, 1.57079633, 5.49778714, 6.28318531])
|
|
1277
|
-
>>> np.unwrap(phase)
|
|
1278
|
-
array([ 0. , 0.78539816, 1.57079633, -0.78539816, 0. ])
|
|
1279
|
-
|
|
1280
|
-
"""
|
|
1281
|
-
p = asarray(p)
|
|
1282
|
-
nd = len(p.shape)
|
|
1283
|
-
dd = diff(p, axis=axis)
|
|
1284
|
-
slice1 = [slice(None, None)]*nd # full slices
|
|
1285
|
-
slice1[axis] = slice(1, None)
|
|
1286
|
-
ddmod = mod(dd + pi, 2*pi) - pi
|
|
1287
|
-
_nx.copyto(ddmod, pi, where=(ddmod == -pi) & (dd > 0))
|
|
1288
|
-
ph_correct = ddmod - dd
|
|
1289
|
-
_nx.copyto(ph_correct, 0, where=abs(dd) < discont)
|
|
1290
|
-
up = array(p, copy=True, dtype='d')
|
|
1291
|
-
up[slice1] = p[slice1] + ph_correct.cumsum(axis)
|
|
1292
|
-
return up
|
|
1293
|
-
|
|
1294
|
-
|
|
1295
|
-
def sort_complex(a):
|
|
1296
|
-
"""
|
|
1297
|
-
Sort a complex array using the real part first, then the imaginary part.
|
|
1298
|
-
|
|
1299
|
-
Parameters
|
|
1300
|
-
----------
|
|
1301
|
-
a : array_like
|
|
1302
|
-
Input array
|
|
1303
|
-
|
|
1304
|
-
Returns
|
|
1305
|
-
-------
|
|
1306
|
-
out : complex ndarray
|
|
1307
|
-
Always returns a sorted complex array.
|
|
1308
|
-
|
|
1309
|
-
Examples
|
|
1310
|
-
--------
|
|
1311
|
-
>>> np.sort_complex([5, 3, 6, 2, 1])
|
|
1312
|
-
array([ 1.+0.j, 2.+0.j, 3.+0.j, 5.+0.j, 6.+0.j])
|
|
1313
|
-
|
|
1314
|
-
>>> np.sort_complex([1 + 2j, 2 - 1j, 3 - 2j, 3 - 3j, 3 + 5j])
|
|
1315
|
-
array([ 1.+2.j, 2.-1.j, 3.-3.j, 3.-2.j, 3.+5.j])
|
|
1316
|
-
|
|
1317
|
-
"""
|
|
1318
|
-
b = array(a, copy=True)
|
|
1319
|
-
b.sort()
|
|
1320
|
-
if not issubclass(b.dtype.type, _nx.complexfloating):
|
|
1321
|
-
if b.dtype.char in 'bhBH':
|
|
1322
|
-
return b.astype('F')
|
|
1323
|
-
elif b.dtype.char == 'g':
|
|
1324
|
-
return b.astype('G')
|
|
1325
|
-
else:
|
|
1326
|
-
return b.astype('D')
|
|
1327
|
-
else:
|
|
1328
|
-
return b
|
|
1329
|
-
|
|
1330
|
-
|
|
1331
|
-
def trim_zeros(filt, trim='fb'):
|
|
1332
|
-
"""
|
|
1333
|
-
Trim the leading and/or trailing zeros from a 1-D array or sequence.
|
|
1334
|
-
|
|
1335
|
-
Parameters
|
|
1336
|
-
----------
|
|
1337
|
-
filt : 1-D array or sequence
|
|
1338
|
-
Input array.
|
|
1339
|
-
trim : str, optional
|
|
1340
|
-
A string with 'f' representing trim from front and 'b' to trim from
|
|
1341
|
-
back. Default is 'fb', trim zeros from both front and back of the
|
|
1342
|
-
array.
|
|
1343
|
-
|
|
1344
|
-
Returns
|
|
1345
|
-
-------
|
|
1346
|
-
trimmed : 1-D array or sequence
|
|
1347
|
-
The result of trimming the input. The input data type is preserved.
|
|
1348
|
-
|
|
1349
|
-
Examples
|
|
1350
|
-
--------
|
|
1351
|
-
>>> a = np.array((0, 0, 0, 1, 2, 3, 0, 2, 1, 0))
|
|
1352
|
-
>>> np.trim_zeros(a)
|
|
1353
|
-
array([1, 2, 3, 0, 2, 1])
|
|
1354
|
-
|
|
1355
|
-
>>> np.trim_zeros(a, 'b')
|
|
1356
|
-
array([0, 0, 0, 1, 2, 3, 0, 2, 1])
|
|
1357
|
-
|
|
1358
|
-
The input data type is preserved, list/tuple in means list/tuple out.
|
|
1359
|
-
|
|
1360
|
-
>>> np.trim_zeros([0, 1, 2, 0])
|
|
1361
|
-
[1, 2]
|
|
1362
|
-
|
|
1363
|
-
"""
|
|
1364
|
-
first = 0
|
|
1365
|
-
trim = trim.upper()
|
|
1366
|
-
if 'F' in trim:
|
|
1367
|
-
for i in filt:
|
|
1368
|
-
if i != 0.:
|
|
1369
|
-
break
|
|
1370
|
-
else:
|
|
1371
|
-
first = first + 1
|
|
1372
|
-
last = len(filt)
|
|
1373
|
-
if 'B' in trim:
|
|
1374
|
-
for i in filt[::-1]:
|
|
1375
|
-
if i != 0.:
|
|
1376
|
-
break
|
|
1377
|
-
else:
|
|
1378
|
-
last = last - 1
|
|
1379
|
-
return filt[first:last]
|
|
1380
|
-
|
|
1381
|
-
|
|
1382
|
-
@deprecate
|
|
1383
|
-
def unique(x):
|
|
1384
|
-
"""
|
|
1385
|
-
This function is deprecated. Use numpy.lib.arraysetops.unique()
|
|
1386
|
-
instead.
|
|
1387
|
-
"""
|
|
1388
|
-
try:
|
|
1389
|
-
tmp = x.flatten()
|
|
1390
|
-
if tmp.size == 0:
|
|
1391
|
-
return tmp
|
|
1392
|
-
tmp.sort()
|
|
1393
|
-
idx = concatenate(([True], tmp[1:] != tmp[:-1]))
|
|
1394
|
-
return tmp[idx]
|
|
1395
|
-
except AttributeError:
|
|
1396
|
-
items = sorted(set(x))
|
|
1397
|
-
return asarray(items)
|
|
1398
|
-
|
|
1399
|
-
|
|
1400
|
-
def extract(condition, arr):
|
|
1401
|
-
"""
|
|
1402
|
-
Return the elements of an array that satisfy some condition.
|
|
1403
|
-
|
|
1404
|
-
This is equivalent to ``np.compress(ravel(condition), ravel(arr))``. If
|
|
1405
|
-
`condition` is boolean ``np.extract`` is equivalent to ``arr[condition]``.
|
|
1406
|
-
|
|
1407
|
-
Parameters
|
|
1408
|
-
----------
|
|
1409
|
-
condition : array_like
|
|
1410
|
-
An array whose nonzero or True entries indicate the elements of `arr`
|
|
1411
|
-
to extract.
|
|
1412
|
-
arr : array_like
|
|
1413
|
-
Input array of the same size as `condition`.
|
|
1414
|
-
|
|
1415
|
-
Returns
|
|
1416
|
-
-------
|
|
1417
|
-
extract : ndarray
|
|
1418
|
-
Rank 1 array of values from `arr` where `condition` is True.
|
|
1419
|
-
|
|
1420
|
-
See Also
|
|
1421
|
-
--------
|
|
1422
|
-
take, put, copyto, compress
|
|
1423
|
-
|
|
1424
|
-
Examples
|
|
1425
|
-
--------
|
|
1426
|
-
>>> arr = np.arange(12).reshape((3, 4))
|
|
1427
|
-
>>> arr
|
|
1428
|
-
array([[ 0, 1, 2, 3],
|
|
1429
|
-
[ 4, 5, 6, 7],
|
|
1430
|
-
[ 8, 9, 10, 11]])
|
|
1431
|
-
>>> condition = np.mod(arr, 3)==0
|
|
1432
|
-
>>> condition
|
|
1433
|
-
array([[ True, False, False, True],
|
|
1434
|
-
[False, False, True, False],
|
|
1435
|
-
[False, True, False, False]], dtype=bool)
|
|
1436
|
-
>>> np.extract(condition, arr)
|
|
1437
|
-
array([0, 3, 6, 9])
|
|
1438
|
-
|
|
1439
|
-
|
|
1440
|
-
If `condition` is boolean:
|
|
1441
|
-
|
|
1442
|
-
>>> arr[condition]
|
|
1443
|
-
array([0, 3, 6, 9])
|
|
1444
|
-
|
|
1445
|
-
"""
|
|
1446
|
-
return _nx.take(ravel(arr), nonzero(ravel(condition))[0])
|
|
1447
|
-
|
|
1448
|
-
|
|
1449
|
-
def place(arr, mask, vals):
|
|
1450
|
-
"""
|
|
1451
|
-
Change elements of an array based on conditional and input values.
|
|
1452
|
-
|
|
1453
|
-
Similar to ``np.copyto(arr, vals, where=mask)``, the difference is that
|
|
1454
|
-
`place` uses the first N elements of `vals`, where N is the number of
|
|
1455
|
-
True values in `mask`, while `copyto` uses the elements where `mask`
|
|
1456
|
-
is True.
|
|
1457
|
-
|
|
1458
|
-
Note that `extract` does the exact opposite of `place`.
|
|
1459
|
-
|
|
1460
|
-
Parameters
|
|
1461
|
-
----------
|
|
1462
|
-
arr : array_like
|
|
1463
|
-
Array to put data into.
|
|
1464
|
-
mask : array_like
|
|
1465
|
-
Boolean mask array. Must have the same size as `a`.
|
|
1466
|
-
vals : 1-D sequence
|
|
1467
|
-
Values to put into `a`. Only the first N elements are used, where
|
|
1468
|
-
N is the number of True values in `mask`. If `vals` is smaller
|
|
1469
|
-
than N it will be repeated.
|
|
1470
|
-
|
|
1471
|
-
See Also
|
|
1472
|
-
--------
|
|
1473
|
-
copyto, put, take, extract
|
|
1474
|
-
|
|
1475
|
-
Examples
|
|
1476
|
-
--------
|
|
1477
|
-
>>> arr = np.arange(6).reshape(2, 3)
|
|
1478
|
-
>>> np.place(arr, arr>2, [44, 55])
|
|
1479
|
-
>>> arr
|
|
1480
|
-
array([[ 0, 1, 2],
|
|
1481
|
-
[44, 55, 44]])
|
|
1482
|
-
|
|
1483
|
-
"""
|
|
1484
|
-
return _insert(arr, mask, vals)
|
|
1485
|
-
|
|
1486
|
-
|
|
1487
|
-
def disp(mesg, device=None, linefeed=True):
|
|
1488
|
-
"""
|
|
1489
|
-
Display a message on a device.
|
|
1490
|
-
|
|
1491
|
-
Parameters
|
|
1492
|
-
----------
|
|
1493
|
-
mesg : str
|
|
1494
|
-
Message to display.
|
|
1495
|
-
device : object
|
|
1496
|
-
Device to write message. If None, defaults to ``sys.stdout`` which is
|
|
1497
|
-
very similar to ``print``. `device` needs to have ``write()`` and
|
|
1498
|
-
``flush()`` methods.
|
|
1499
|
-
linefeed : bool, optional
|
|
1500
|
-
Option whether to print a line feed or not. Defaults to True.
|
|
1501
|
-
|
|
1502
|
-
Raises
|
|
1503
|
-
------
|
|
1504
|
-
AttributeError
|
|
1505
|
-
If `device` does not have a ``write()`` or ``flush()`` method.
|
|
1506
|
-
|
|
1507
|
-
Examples
|
|
1508
|
-
--------
|
|
1509
|
-
Besides ``sys.stdout``, a file-like object can also be used as it has
|
|
1510
|
-
both required methods:
|
|
1511
|
-
|
|
1512
|
-
>>> from StringIO import StringIO
|
|
1513
|
-
>>> buf = StringIO()
|
|
1514
|
-
>>> np.disp('"Display" in a file', device=buf)
|
|
1515
|
-
>>> buf.getvalue()
|
|
1516
|
-
'"Display" in a file\\n'
|
|
1517
|
-
|
|
1518
|
-
"""
|
|
1519
|
-
if device is None:
|
|
1520
|
-
device = sys.stdout
|
|
1521
|
-
if linefeed:
|
|
1522
|
-
device.write('%s\n' % mesg)
|
|
1523
|
-
else:
|
|
1524
|
-
device.write('%s' % mesg)
|
|
1525
|
-
device.flush()
|
|
1526
|
-
return
|
|
1527
|
-
|
|
1528
|
-
|
|
1529
|
-
class vectorize(object):
|
|
1530
|
-
"""
|
|
1531
|
-
vectorize(pyfunc, otypes='', doc=None, excluded=None, cache=False)
|
|
1532
|
-
|
|
1533
|
-
Generalized function class.
|
|
1534
|
-
|
|
1535
|
-
Define a vectorized function which takes a nested sequence
|
|
1536
|
-
of objects or numpy arrays as inputs and returns a
|
|
1537
|
-
numpy array as output. The vectorized function evaluates `pyfunc` over
|
|
1538
|
-
successive tuples of the input arrays like the python map function,
|
|
1539
|
-
except it uses the broadcasting rules of numpy.
|
|
1540
|
-
|
|
1541
|
-
The data type of the output of `vectorized` is determined by calling
|
|
1542
|
-
the function with the first element of the input. This can be avoided
|
|
1543
|
-
by specifying the `otypes` argument.
|
|
1544
|
-
|
|
1545
|
-
Parameters
|
|
1546
|
-
----------
|
|
1547
|
-
pyfunc : callable
|
|
1548
|
-
A python function or method.
|
|
1549
|
-
otypes : str or list of dtypes, optional
|
|
1550
|
-
The output data type. It must be specified as either a string of
|
|
1551
|
-
typecode characters or a list of data type specifiers. There should
|
|
1552
|
-
be one data type specifier for each output.
|
|
1553
|
-
doc : str, optional
|
|
1554
|
-
The docstring for the function. If `None`, the docstring will be the
|
|
1555
|
-
``pyfunc.__doc__``.
|
|
1556
|
-
excluded : set, optional
|
|
1557
|
-
Set of strings or integers representing the positional or keyword
|
|
1558
|
-
arguments for which the function will not be vectorized. These will be
|
|
1559
|
-
passed directly to `pyfunc` unmodified.
|
|
1560
|
-
|
|
1561
|
-
.. versionadded:: 1.7.0
|
|
1562
|
-
|
|
1563
|
-
cache : bool, optional
|
|
1564
|
-
If `True`, then cache the first function call that determines the number
|
|
1565
|
-
of outputs if `otypes` is not provided.
|
|
1566
|
-
|
|
1567
|
-
.. versionadded:: 1.7.0
|
|
1568
|
-
|
|
1569
|
-
Returns
|
|
1570
|
-
-------
|
|
1571
|
-
vectorized : callable
|
|
1572
|
-
Vectorized function.
|
|
1573
|
-
|
|
1574
|
-
Examples
|
|
1575
|
-
--------
|
|
1576
|
-
>>> def myfunc(a, b):
|
|
1577
|
-
... "Return a-b if a>b, otherwise return a+b"
|
|
1578
|
-
... if a > b:
|
|
1579
|
-
... return a - b
|
|
1580
|
-
... else:
|
|
1581
|
-
... return a + b
|
|
1582
|
-
|
|
1583
|
-
>>> vfunc = np.vectorize(myfunc)
|
|
1584
|
-
>>> vfunc([1, 2, 3, 4], 2)
|
|
1585
|
-
array([3, 4, 1, 2])
|
|
1586
|
-
|
|
1587
|
-
The docstring is taken from the input function to `vectorize` unless it
|
|
1588
|
-
is specified
|
|
1589
|
-
|
|
1590
|
-
>>> vfunc.__doc__
|
|
1591
|
-
'Return a-b if a>b, otherwise return a+b'
|
|
1592
|
-
>>> vfunc = np.vectorize(myfunc, doc='Vectorized `myfunc`')
|
|
1593
|
-
>>> vfunc.__doc__
|
|
1594
|
-
'Vectorized `myfunc`'
|
|
1595
|
-
|
|
1596
|
-
The output type is determined by evaluating the first element of the input,
|
|
1597
|
-
unless it is specified
|
|
1598
|
-
|
|
1599
|
-
>>> out = vfunc([1, 2, 3, 4], 2)
|
|
1600
|
-
>>> type(out[0])
|
|
1601
|
-
<type 'numpy.int32'>
|
|
1602
|
-
>>> vfunc = np.vectorize(myfunc, otypes=[np.float])
|
|
1603
|
-
>>> out = vfunc([1, 2, 3, 4], 2)
|
|
1604
|
-
>>> type(out[0])
|
|
1605
|
-
<type 'numpy.float64'>
|
|
1606
|
-
|
|
1607
|
-
The `excluded` argument can be used to prevent vectorizing over certain
|
|
1608
|
-
arguments. This can be useful for array-like arguments of a fixed length
|
|
1609
|
-
such as the coefficients for a polynomial as in `polyval`:
|
|
1610
|
-
|
|
1611
|
-
>>> def mypolyval(p, x):
|
|
1612
|
-
... _p = list(p)
|
|
1613
|
-
... res = _p.pop(0)
|
|
1614
|
-
... while _p:
|
|
1615
|
-
... res = res*x + _p.pop(0)
|
|
1616
|
-
... return res
|
|
1617
|
-
>>> vpolyval = np.vectorize(mypolyval, excluded=['p'])
|
|
1618
|
-
>>> vpolyval(p=[1, 2, 3], x=[0, 1])
|
|
1619
|
-
array([3, 6])
|
|
1620
|
-
|
|
1621
|
-
Positional arguments may also be excluded by specifying their position:
|
|
1622
|
-
|
|
1623
|
-
>>> vpolyval.excluded.add(0)
|
|
1624
|
-
>>> vpolyval([1, 2, 3], x=[0, 1])
|
|
1625
|
-
array([3, 6])
|
|
1626
|
-
|
|
1627
|
-
Notes
|
|
1628
|
-
-----
|
|
1629
|
-
The `vectorize` function is provided primarily for convenience, not for
|
|
1630
|
-
performance. The implementation is essentially a for loop.
|
|
1631
|
-
|
|
1632
|
-
If `otypes` is not specified, then a call to the function with the
|
|
1633
|
-
first argument will be used to determine the number of outputs. The
|
|
1634
|
-
results of this call will be cached if `cache` is `True` to prevent
|
|
1635
|
-
calling the function twice. However, to implement the cache, the
|
|
1636
|
-
original function must be wrapped which will slow down subsequent
|
|
1637
|
-
calls, so only do this if your function is expensive.
|
|
1638
|
-
|
|
1639
|
-
The new keyword argument interface and `excluded` argument support
|
|
1640
|
-
further degrades performance.
|
|
1641
|
-
|
|
1642
|
-
"""
|
|
1643
|
-
|
|
1644
|
-
def __init__(self, pyfunc, otypes='', doc=None, excluded=None,
|
|
1645
|
-
cache=False):
|
|
1646
|
-
self.pyfunc = pyfunc
|
|
1647
|
-
self.cache = cache
|
|
1648
|
-
self._ufunc = None # Caching to improve default performance
|
|
1649
|
-
|
|
1650
|
-
if doc is None:
|
|
1651
|
-
self.__doc__ = pyfunc.__doc__
|
|
1652
|
-
else:
|
|
1653
|
-
self.__doc__ = doc
|
|
1654
|
-
|
|
1655
|
-
if isinstance(otypes, str):
|
|
1656
|
-
self.otypes = otypes
|
|
1657
|
-
for char in self.otypes:
|
|
1658
|
-
if char not in typecodes['All']:
|
|
1659
|
-
raise ValueError(
|
|
1660
|
-
"Invalid otype specified: %s" % (char,))
|
|
1661
|
-
elif iterable(otypes):
|
|
1662
|
-
self.otypes = ''.join([_nx.dtype(x).char for x in otypes])
|
|
1663
|
-
else:
|
|
1664
|
-
raise ValueError(
|
|
1665
|
-
"Invalid otype specification")
|
|
1666
|
-
|
|
1667
|
-
# Excluded variable support
|
|
1668
|
-
if excluded is None:
|
|
1669
|
-
excluded = set()
|
|
1670
|
-
self.excluded = set(excluded)
|
|
1671
|
-
|
|
1672
|
-
def __call__(self, *args, **kwargs):
|
|
1673
|
-
"""
|
|
1674
|
-
Return arrays with the results of `pyfunc` broadcast (vectorized) over
|
|
1675
|
-
`args` and `kwargs` not in `excluded`.
|
|
1676
|
-
"""
|
|
1677
|
-
excluded = self.excluded
|
|
1678
|
-
if not kwargs and not excluded:
|
|
1679
|
-
func = self.pyfunc
|
|
1680
|
-
vargs = args
|
|
1681
|
-
else:
|
|
1682
|
-
# The wrapper accepts only positional arguments: we use `names` and
|
|
1683
|
-
# `inds` to mutate `the_args` and `kwargs` to pass to the original
|
|
1684
|
-
# function.
|
|
1685
|
-
nargs = len(args)
|
|
1686
|
-
|
|
1687
|
-
names = [_n for _n in kwargs if _n not in excluded]
|
|
1688
|
-
inds = [_i for _i in range(nargs) if _i not in excluded]
|
|
1689
|
-
the_args = list(args)
|
|
1690
|
-
|
|
1691
|
-
def func(*vargs):
|
|
1692
|
-
for _n, _i in enumerate(inds):
|
|
1693
|
-
the_args[_i] = vargs[_n]
|
|
1694
|
-
kwargs.update(zip(names, vargs[len(inds):]))
|
|
1695
|
-
return self.pyfunc(*the_args, **kwargs)
|
|
1696
|
-
|
|
1697
|
-
vargs = [args[_i] for _i in inds]
|
|
1698
|
-
vargs.extend([kwargs[_n] for _n in names])
|
|
1699
|
-
|
|
1700
|
-
return self._vectorize_call(func=func, args=vargs)
|
|
1701
|
-
|
|
1702
|
-
def _get_ufunc_and_otypes(self, func, args):
|
|
1703
|
-
"""Return (ufunc, otypes)."""
|
|
1704
|
-
# frompyfunc will fail if args is empty
|
|
1705
|
-
if not args:
|
|
1706
|
-
raise ValueError('args can not be empty')
|
|
1707
|
-
|
|
1708
|
-
if self.otypes:
|
|
1709
|
-
otypes = self.otypes
|
|
1710
|
-
nout = len(otypes)
|
|
1711
|
-
|
|
1712
|
-
# Note logic here: We only *use* self._ufunc if func is self.pyfunc
|
|
1713
|
-
# even though we set self._ufunc regardless.
|
|
1714
|
-
if func is self.pyfunc and self._ufunc is not None:
|
|
1715
|
-
ufunc = self._ufunc
|
|
1716
|
-
else:
|
|
1717
|
-
ufunc = self._ufunc = frompyfunc(func, len(args), nout)
|
|
1718
|
-
else:
|
|
1719
|
-
# Get number of outputs and output types by calling the function on
|
|
1720
|
-
# the first entries of args. We also cache the result to prevent
|
|
1721
|
-
# the subsequent call when the ufunc is evaluated.
|
|
1722
|
-
# Assumes that ufunc first evaluates the 0th elements in the input
|
|
1723
|
-
# arrays (the input values are not checked to ensure this)
|
|
1724
|
-
inputs = [asarray(_a).flat[0] for _a in args]
|
|
1725
|
-
outputs = func(*inputs)
|
|
1726
|
-
|
|
1727
|
-
# Performance note: profiling indicates that -- for simple
|
|
1728
|
-
# functions at least -- this wrapping can almost double the
|
|
1729
|
-
# execution time.
|
|
1730
|
-
# Hence we make it optional.
|
|
1731
|
-
if self.cache:
|
|
1732
|
-
_cache = [outputs]
|
|
1733
|
-
|
|
1734
|
-
def _func(*vargs):
|
|
1735
|
-
if _cache:
|
|
1736
|
-
return _cache.pop()
|
|
1737
|
-
else:
|
|
1738
|
-
return func(*vargs)
|
|
1739
|
-
else:
|
|
1740
|
-
_func = func
|
|
1741
|
-
|
|
1742
|
-
if isinstance(outputs, tuple):
|
|
1743
|
-
nout = len(outputs)
|
|
1744
|
-
else:
|
|
1745
|
-
nout = 1
|
|
1746
|
-
outputs = (outputs,)
|
|
1747
|
-
|
|
1748
|
-
otypes = ''.join([asarray(outputs[_k]).dtype.char
|
|
1749
|
-
for _k in range(nout)])
|
|
1750
|
-
|
|
1751
|
-
# Performance note: profiling indicates that creating the ufunc is
|
|
1752
|
-
# not a significant cost compared with wrapping so it seems not
|
|
1753
|
-
# worth trying to cache this.
|
|
1754
|
-
ufunc = frompyfunc(_func, len(args), nout)
|
|
1755
|
-
|
|
1756
|
-
return ufunc, otypes
|
|
1757
|
-
|
|
1758
|
-
def _vectorize_call(self, func, args):
|
|
1759
|
-
"""Vectorized call to `func` over positional `args`."""
|
|
1760
|
-
if not args:
|
|
1761
|
-
_res = func()
|
|
1762
|
-
else:
|
|
1763
|
-
ufunc, otypes = self._get_ufunc_and_otypes(func=func, args=args)
|
|
1764
|
-
|
|
1765
|
-
# Convert args to object arrays first
|
|
1766
|
-
inputs = [array(_a, copy=False, subok=True, dtype=object)
|
|
1767
|
-
for _a in args]
|
|
1768
|
-
|
|
1769
|
-
outputs = ufunc(*inputs)
|
|
1770
|
-
|
|
1771
|
-
if ufunc.nout == 1:
|
|
1772
|
-
_res = array(outputs,
|
|
1773
|
-
copy=False, subok=True, dtype=otypes[0])
|
|
1774
|
-
else:
|
|
1775
|
-
_res = tuple([array(_x, copy=False, subok=True, dtype=_t)
|
|
1776
|
-
for _x, _t in zip(outputs, otypes)])
|
|
1777
|
-
return _res
|
|
1778
|
-
|
|
1779
|
-
|
|
1780
|
-
def cov(m, y=None, rowvar=1, bias=0, ddof=None):
|
|
1781
|
-
"""
|
|
1782
|
-
Estimate a covariance matrix, given data.
|
|
1783
|
-
|
|
1784
|
-
Covariance indicates the level to which two variables vary together.
|
|
1785
|
-
If we examine N-dimensional samples, :math:`X = [x_1, x_2, ... x_N]^T`,
|
|
1786
|
-
then the covariance matrix element :math:`C_{ij}` is the covariance of
|
|
1787
|
-
:math:`x_i` and :math:`x_j`. The element :math:`C_{ii}` is the variance
|
|
1788
|
-
of :math:`x_i`.
|
|
1789
|
-
|
|
1790
|
-
Parameters
|
|
1791
|
-
----------
|
|
1792
|
-
m : array_like
|
|
1793
|
-
A 1-D or 2-D array containing multiple variables and observations.
|
|
1794
|
-
Each row of `m` represents a variable, and each column a single
|
|
1795
|
-
observation of all those variables. Also see `rowvar` below.
|
|
1796
|
-
y : array_like, optional
|
|
1797
|
-
An additional set of variables and observations. `y` has the same
|
|
1798
|
-
form as that of `m`.
|
|
1799
|
-
rowvar : int, optional
|
|
1800
|
-
If `rowvar` is non-zero (default), then each row represents a
|
|
1801
|
-
variable, with observations in the columns. Otherwise, the relationship
|
|
1802
|
-
is transposed: each column represents a variable, while the rows
|
|
1803
|
-
contain observations.
|
|
1804
|
-
bias : int, optional
|
|
1805
|
-
Default normalization is by ``(N - 1)``, where ``N`` is the number of
|
|
1806
|
-
observations given (unbiased estimate). If `bias` is 1, then
|
|
1807
|
-
normalization is by ``N``. These values can be overridden by using
|
|
1808
|
-
the keyword ``ddof`` in numpy versions >= 1.5.
|
|
1809
|
-
ddof : int, optional
|
|
1810
|
-
.. versionadded:: 1.5
|
|
1811
|
-
If not ``None`` normalization is by ``(N - ddof)``, where ``N`` is
|
|
1812
|
-
the number of observations; this overrides the value implied by
|
|
1813
|
-
``bias``. The default value is ``None``.
|
|
1814
|
-
|
|
1815
|
-
Returns
|
|
1816
|
-
-------
|
|
1817
|
-
out : ndarray
|
|
1818
|
-
The covariance matrix of the variables.
|
|
1819
|
-
|
|
1820
|
-
See Also
|
|
1821
|
-
--------
|
|
1822
|
-
corrcoef : Normalized covariance matrix
|
|
1823
|
-
|
|
1824
|
-
Examples
|
|
1825
|
-
--------
|
|
1826
|
-
Consider two variables, :math:`x_0` and :math:`x_1`, which
|
|
1827
|
-
correlate perfectly, but in opposite directions:
|
|
1828
|
-
|
|
1829
|
-
>>> x = np.array([[0, 2], [1, 1], [2, 0]]).T
|
|
1830
|
-
>>> x
|
|
1831
|
-
array([[0, 1, 2],
|
|
1832
|
-
[2, 1, 0]])
|
|
1833
|
-
|
|
1834
|
-
Note how :math:`x_0` increases while :math:`x_1` decreases. The covariance
|
|
1835
|
-
matrix shows this clearly:
|
|
1836
|
-
|
|
1837
|
-
>>> np.cov(x)
|
|
1838
|
-
array([[ 1., -1.],
|
|
1839
|
-
[-1., 1.]])
|
|
1840
|
-
|
|
1841
|
-
Note that element :math:`C_{0,1}`, which shows the correlation between
|
|
1842
|
-
:math:`x_0` and :math:`x_1`, is negative.
|
|
1843
|
-
|
|
1844
|
-
Further, note how `x` and `y` are combined:
|
|
1845
|
-
|
|
1846
|
-
>>> x = [-2.1, -1, 4.3]
|
|
1847
|
-
>>> y = [3, 1.1, 0.12]
|
|
1848
|
-
>>> X = np.vstack((x,y))
|
|
1849
|
-
>>> print np.cov(X)
|
|
1850
|
-
[[ 11.71 -4.286 ]
|
|
1851
|
-
[ -4.286 2.14413333]]
|
|
1852
|
-
>>> print np.cov(x, y)
|
|
1853
|
-
[[ 11.71 -4.286 ]
|
|
1854
|
-
[ -4.286 2.14413333]]
|
|
1855
|
-
>>> print np.cov(x)
|
|
1856
|
-
11.71
|
|
1857
|
-
|
|
1858
|
-
"""
|
|
1859
|
-
# Check inputs
|
|
1860
|
-
if ddof is not None and ddof != int(ddof):
|
|
1861
|
-
raise ValueError(
|
|
1862
|
-
"ddof must be integer")
|
|
1863
|
-
|
|
1864
|
-
# Handles complex arrays too
|
|
1865
|
-
m = np.asarray(m)
|
|
1866
|
-
if y is None:
|
|
1867
|
-
dtype = np.result_type(m, np.float64)
|
|
1868
|
-
else:
|
|
1869
|
-
y = np.asarray(y)
|
|
1870
|
-
dtype = np.result_type(m, y, np.float64)
|
|
1871
|
-
X = array(m, ndmin=2, dtype=dtype)
|
|
1872
|
-
|
|
1873
|
-
if X.shape[0] == 1:
|
|
1874
|
-
rowvar = 1
|
|
1875
|
-
if rowvar:
|
|
1876
|
-
N = X.shape[1]
|
|
1877
|
-
axis = 0
|
|
1878
|
-
else:
|
|
1879
|
-
N = X.shape[0]
|
|
1880
|
-
axis = 1
|
|
1881
|
-
|
|
1882
|
-
# check ddof
|
|
1883
|
-
if ddof is None:
|
|
1884
|
-
if bias == 0:
|
|
1885
|
-
ddof = 1
|
|
1886
|
-
else:
|
|
1887
|
-
ddof = 0
|
|
1888
|
-
fact = float(N - ddof)
|
|
1889
|
-
if fact <= 0:
|
|
1890
|
-
warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning)
|
|
1891
|
-
fact = 0.0
|
|
1892
|
-
|
|
1893
|
-
if y is not None:
|
|
1894
|
-
y = array(y, copy=False, ndmin=2, dtype=dtype)
|
|
1895
|
-
X = concatenate((X, y), axis)
|
|
1896
|
-
|
|
1897
|
-
X -= X.mean(axis=1-axis, keepdims=True)
|
|
1898
|
-
if not rowvar:
|
|
1899
|
-
return (dot(X.T, X.conj()) / fact).squeeze()
|
|
1900
|
-
else:
|
|
1901
|
-
return (dot(X, X.T.conj()) / fact).squeeze()
|
|
1902
|
-
|
|
1903
|
-
|
|
1904
|
-
def corrcoef(x, y=None, rowvar=1, bias=0, ddof=None):
|
|
1905
|
-
"""
|
|
1906
|
-
Return correlation coefficients.
|
|
1907
|
-
|
|
1908
|
-
Please refer to the documentation for `cov` for more detail. The
|
|
1909
|
-
relationship between the correlation coefficient matrix, `P`, and the
|
|
1910
|
-
covariance matrix, `C`, is
|
|
1911
|
-
|
|
1912
|
-
.. math:: P_{ij} = \\frac{ C_{ij} } { \\sqrt{ C_{ii} * C_{jj} } }
|
|
1913
|
-
|
|
1914
|
-
The values of `P` are between -1 and 1, inclusive.
|
|
1915
|
-
|
|
1916
|
-
Parameters
|
|
1917
|
-
----------
|
|
1918
|
-
x : array_like
|
|
1919
|
-
A 1-D or 2-D array containing multiple variables and observations.
|
|
1920
|
-
Each row of `m` represents a variable, and each column a single
|
|
1921
|
-
observation of all those variables. Also see `rowvar` below.
|
|
1922
|
-
y : array_like, optional
|
|
1923
|
-
An additional set of variables and observations. `y` has the same
|
|
1924
|
-
shape as `m`.
|
|
1925
|
-
rowvar : int, optional
|
|
1926
|
-
If `rowvar` is non-zero (default), then each row represents a
|
|
1927
|
-
variable, with observations in the columns. Otherwise, the relationship
|
|
1928
|
-
is transposed: each column represents a variable, while the rows
|
|
1929
|
-
contain observations.
|
|
1930
|
-
bias : int, optional
|
|
1931
|
-
Default normalization is by ``(N - 1)``, where ``N`` is the number of
|
|
1932
|
-
observations (unbiased estimate). If `bias` is 1, then
|
|
1933
|
-
normalization is by ``N``. These values can be overridden by using
|
|
1934
|
-
the keyword ``ddof`` in numpy versions >= 1.5.
|
|
1935
|
-
ddof : {None, int}, optional
|
|
1936
|
-
.. versionadded:: 1.5
|
|
1937
|
-
If not ``None`` normalization is by ``(N - ddof)``, where ``N`` is
|
|
1938
|
-
the number of observations; this overrides the value implied by
|
|
1939
|
-
``bias``. The default value is ``None``.
|
|
1940
|
-
|
|
1941
|
-
Returns
|
|
1942
|
-
-------
|
|
1943
|
-
out : ndarray
|
|
1944
|
-
The correlation coefficient matrix of the variables.
|
|
1945
|
-
|
|
1946
|
-
See Also
|
|
1947
|
-
--------
|
|
1948
|
-
cov : Covariance matrix
|
|
1949
|
-
|
|
1950
|
-
"""
|
|
1951
|
-
c = cov(x, y, rowvar, bias, ddof)
|
|
1952
|
-
try:
|
|
1953
|
-
d = diag(c)
|
|
1954
|
-
except ValueError: # scalar covariance
|
|
1955
|
-
# nan if incorrect value (nan, inf, 0), 1 otherwise
|
|
1956
|
-
return c / c
|
|
1957
|
-
return c / sqrt(multiply.outer(d, d))
|
|
1958
|
-
|
|
1959
|
-
|
|
1960
|
-
def blackman(M):
|
|
1961
|
-
"""
|
|
1962
|
-
Return the Blackman window.
|
|
1963
|
-
|
|
1964
|
-
The Blackman window is a taper formed by using the first three
|
|
1965
|
-
terms of a summation of cosines. It was designed to have close to the
|
|
1966
|
-
minimal leakage possible. It is close to optimal, only slightly worse
|
|
1967
|
-
than a Kaiser window.
|
|
1968
|
-
|
|
1969
|
-
Parameters
|
|
1970
|
-
----------
|
|
1971
|
-
M : int
|
|
1972
|
-
Number of points in the output window. If zero or less, an empty
|
|
1973
|
-
array is returned.
|
|
1974
|
-
|
|
1975
|
-
Returns
|
|
1976
|
-
-------
|
|
1977
|
-
out : ndarray
|
|
1978
|
-
The window, with the maximum value normalized to one (the value one
|
|
1979
|
-
appears only if the number of samples is odd).
|
|
1980
|
-
|
|
1981
|
-
See Also
|
|
1982
|
-
--------
|
|
1983
|
-
bartlett, hamming, hanning, kaiser
|
|
1984
|
-
|
|
1985
|
-
Notes
|
|
1986
|
-
-----
|
|
1987
|
-
The Blackman window is defined as
|
|
1988
|
-
|
|
1989
|
-
.. math:: w(n) = 0.42 - 0.5 \\cos(2\\pi n/M) + 0.08 \\cos(4\\pi n/M)
|
|
1990
|
-
|
|
1991
|
-
Most references to the Blackman window come from the signal processing
|
|
1992
|
-
literature, where it is used as one of many windowing functions for
|
|
1993
|
-
smoothing values. It is also known as an apodization (which means
|
|
1994
|
-
"removing the foot", i.e. smoothing discontinuities at the beginning
|
|
1995
|
-
and end of the sampled signal) or tapering function. It is known as a
|
|
1996
|
-
"near optimal" tapering function, almost as good (by some measures)
|
|
1997
|
-
as the kaiser window.
|
|
1998
|
-
|
|
1999
|
-
References
|
|
2000
|
-
----------
|
|
2001
|
-
Blackman, R.B. and Tukey, J.W., (1958) The measurement of power spectra,
|
|
2002
|
-
Dover Publications, New York.
|
|
2003
|
-
|
|
2004
|
-
Oppenheim, A.V., and R.W. Schafer. Discrete-Time Signal Processing.
|
|
2005
|
-
Upper Saddle River, NJ: Prentice-Hall, 1999, pp. 468-471.
|
|
2006
|
-
|
|
2007
|
-
Examples
|
|
2008
|
-
--------
|
|
2009
|
-
>>> np.blackman(12)
|
|
2010
|
-
array([ -1.38777878e-17, 3.26064346e-02, 1.59903635e-01,
|
|
2011
|
-
4.14397981e-01, 7.36045180e-01, 9.67046769e-01,
|
|
2012
|
-
9.67046769e-01, 7.36045180e-01, 4.14397981e-01,
|
|
2013
|
-
1.59903635e-01, 3.26064346e-02, -1.38777878e-17])
|
|
2014
|
-
|
|
2015
|
-
|
|
2016
|
-
Plot the window and the frequency response:
|
|
2017
|
-
|
|
2018
|
-
>>> from numpy.fft import fft, fftshift
|
|
2019
|
-
>>> window = np.blackman(51)
|
|
2020
|
-
>>> plt.plot(window)
|
|
2021
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2022
|
-
>>> plt.title("Blackman window")
|
|
2023
|
-
<matplotlib.text.Text object at 0x...>
|
|
2024
|
-
>>> plt.ylabel("Amplitude")
|
|
2025
|
-
<matplotlib.text.Text object at 0x...>
|
|
2026
|
-
>>> plt.xlabel("Sample")
|
|
2027
|
-
<matplotlib.text.Text object at 0x...>
|
|
2028
|
-
>>> plt.show()
|
|
2029
|
-
|
|
2030
|
-
>>> plt.figure()
|
|
2031
|
-
<matplotlib.figure.Figure object at 0x...>
|
|
2032
|
-
>>> A = fft(window, 2048) / 25.5
|
|
2033
|
-
>>> mag = np.abs(fftshift(A))
|
|
2034
|
-
>>> freq = np.linspace(-0.5, 0.5, len(A))
|
|
2035
|
-
>>> response = 20 * np.log10(mag)
|
|
2036
|
-
>>> response = np.clip(response, -100, 100)
|
|
2037
|
-
>>> plt.plot(freq, response)
|
|
2038
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2039
|
-
>>> plt.title("Frequency response of Blackman window")
|
|
2040
|
-
<matplotlib.text.Text object at 0x...>
|
|
2041
|
-
>>> plt.ylabel("Magnitude [dB]")
|
|
2042
|
-
<matplotlib.text.Text object at 0x...>
|
|
2043
|
-
>>> plt.xlabel("Normalized frequency [cycles per sample]")
|
|
2044
|
-
<matplotlib.text.Text object at 0x...>
|
|
2045
|
-
>>> plt.axis('tight')
|
|
2046
|
-
(-0.5, 0.5, -100.0, ...)
|
|
2047
|
-
>>> plt.show()
|
|
2048
|
-
|
|
2049
|
-
"""
|
|
2050
|
-
if M < 1:
|
|
2051
|
-
return array([])
|
|
2052
|
-
if M == 1:
|
|
2053
|
-
return ones(1, float)
|
|
2054
|
-
n = arange(0, M)
|
|
2055
|
-
return 0.42 - 0.5*cos(2.0*pi*n/(M-1)) + 0.08*cos(4.0*pi*n/(M-1))
|
|
2056
|
-
|
|
2057
|
-
|
|
2058
|
-
def bartlett(M):
|
|
2059
|
-
"""
|
|
2060
|
-
Return the Bartlett window.
|
|
2061
|
-
|
|
2062
|
-
The Bartlett window is very similar to a triangular window, except
|
|
2063
|
-
that the end points are at zero. It is often used in signal
|
|
2064
|
-
processing for tapering a signal, without generating too much
|
|
2065
|
-
ripple in the frequency domain.
|
|
2066
|
-
|
|
2067
|
-
Parameters
|
|
2068
|
-
----------
|
|
2069
|
-
M : int
|
|
2070
|
-
Number of points in the output window. If zero or less, an
|
|
2071
|
-
empty array is returned.
|
|
2072
|
-
|
|
2073
|
-
Returns
|
|
2074
|
-
-------
|
|
2075
|
-
out : array
|
|
2076
|
-
The triangular window, with the maximum value normalized to one
|
|
2077
|
-
(the value one appears only if the number of samples is odd), with
|
|
2078
|
-
the first and last samples equal to zero.
|
|
2079
|
-
|
|
2080
|
-
See Also
|
|
2081
|
-
--------
|
|
2082
|
-
blackman, hamming, hanning, kaiser
|
|
2083
|
-
|
|
2084
|
-
Notes
|
|
2085
|
-
-----
|
|
2086
|
-
The Bartlett window is defined as
|
|
2087
|
-
|
|
2088
|
-
.. math:: w(n) = \\frac{2}{M-1} \\left(
|
|
2089
|
-
\\frac{M-1}{2} - \\left|n - \\frac{M-1}{2}\\right|
|
|
2090
|
-
\\right)
|
|
2091
|
-
|
|
2092
|
-
Most references to the Bartlett window come from the signal
|
|
2093
|
-
processing literature, where it is used as one of many windowing
|
|
2094
|
-
functions for smoothing values. Note that convolution with this
|
|
2095
|
-
window produces linear interpolation. It is also known as an
|
|
2096
|
-
apodization (which means"removing the foot", i.e. smoothing
|
|
2097
|
-
discontinuities at the beginning and end of the sampled signal) or
|
|
2098
|
-
tapering function. The fourier transform of the Bartlett is the product
|
|
2099
|
-
of two sinc functions.
|
|
2100
|
-
Note the excellent discussion in Kanasewich.
|
|
2101
|
-
|
|
2102
|
-
References
|
|
2103
|
-
----------
|
|
2104
|
-
.. [1] M.S. Bartlett, "Periodogram Analysis and Continuous Spectra",
|
|
2105
|
-
Biometrika 37, 1-16, 1950.
|
|
2106
|
-
.. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics",
|
|
2107
|
-
The University of Alberta Press, 1975, pp. 109-110.
|
|
2108
|
-
.. [3] A.V. Oppenheim and R.W. Schafer, "Discrete-Time Signal
|
|
2109
|
-
Processing", Prentice-Hall, 1999, pp. 468-471.
|
|
2110
|
-
.. [4] Wikipedia, "Window function",
|
|
2111
|
-
http://en.wikipedia.org/wiki/Window_function
|
|
2112
|
-
.. [5] W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling,
|
|
2113
|
-
"Numerical Recipes", Cambridge University Press, 1986, page 429.
|
|
2114
|
-
|
|
2115
|
-
|
|
2116
|
-
Examples
|
|
2117
|
-
--------
|
|
2118
|
-
>>> np.bartlett(12)
|
|
2119
|
-
array([ 0. , 0.18181818, 0.36363636, 0.54545455, 0.72727273,
|
|
2120
|
-
0.90909091, 0.90909091, 0.72727273, 0.54545455, 0.36363636,
|
|
2121
|
-
0.18181818, 0. ])
|
|
2122
|
-
|
|
2123
|
-
Plot the window and its frequency response (requires SciPy and matplotlib):
|
|
2124
|
-
|
|
2125
|
-
>>> from numpy.fft import fft, fftshift
|
|
2126
|
-
>>> window = np.bartlett(51)
|
|
2127
|
-
>>> plt.plot(window)
|
|
2128
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2129
|
-
>>> plt.title("Bartlett window")
|
|
2130
|
-
<matplotlib.text.Text object at 0x...>
|
|
2131
|
-
>>> plt.ylabel("Amplitude")
|
|
2132
|
-
<matplotlib.text.Text object at 0x...>
|
|
2133
|
-
>>> plt.xlabel("Sample")
|
|
2134
|
-
<matplotlib.text.Text object at 0x...>
|
|
2135
|
-
>>> plt.show()
|
|
2136
|
-
|
|
2137
|
-
>>> plt.figure()
|
|
2138
|
-
<matplotlib.figure.Figure object at 0x...>
|
|
2139
|
-
>>> A = fft(window, 2048) / 25.5
|
|
2140
|
-
>>> mag = np.abs(fftshift(A))
|
|
2141
|
-
>>> freq = np.linspace(-0.5, 0.5, len(A))
|
|
2142
|
-
>>> response = 20 * np.log10(mag)
|
|
2143
|
-
>>> response = np.clip(response, -100, 100)
|
|
2144
|
-
>>> plt.plot(freq, response)
|
|
2145
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2146
|
-
>>> plt.title("Frequency response of Bartlett window")
|
|
2147
|
-
<matplotlib.text.Text object at 0x...>
|
|
2148
|
-
>>> plt.ylabel("Magnitude [dB]")
|
|
2149
|
-
<matplotlib.text.Text object at 0x...>
|
|
2150
|
-
>>> plt.xlabel("Normalized frequency [cycles per sample]")
|
|
2151
|
-
<matplotlib.text.Text object at 0x...>
|
|
2152
|
-
>>> plt.axis('tight')
|
|
2153
|
-
(-0.5, 0.5, -100.0, ...)
|
|
2154
|
-
>>> plt.show()
|
|
2155
|
-
|
|
2156
|
-
"""
|
|
2157
|
-
if M < 1:
|
|
2158
|
-
return array([])
|
|
2159
|
-
if M == 1:
|
|
2160
|
-
return ones(1, float)
|
|
2161
|
-
n = arange(0, M)
|
|
2162
|
-
return where(less_equal(n, (M-1)/2.0), 2.0*n/(M-1), 2.0 - 2.0*n/(M-1))
|
|
2163
|
-
|
|
2164
|
-
|
|
2165
|
-
def hanning(M):
|
|
2166
|
-
"""
|
|
2167
|
-
Return the Hanning window.
|
|
2168
|
-
|
|
2169
|
-
The Hanning window is a taper formed by using a weighted cosine.
|
|
2170
|
-
|
|
2171
|
-
Parameters
|
|
2172
|
-
----------
|
|
2173
|
-
M : int
|
|
2174
|
-
Number of points in the output window. If zero or less, an
|
|
2175
|
-
empty array is returned.
|
|
2176
|
-
|
|
2177
|
-
Returns
|
|
2178
|
-
-------
|
|
2179
|
-
out : ndarray, shape(M,)
|
|
2180
|
-
The window, with the maximum value normalized to one (the value
|
|
2181
|
-
one appears only if `M` is odd).
|
|
2182
|
-
|
|
2183
|
-
See Also
|
|
2184
|
-
--------
|
|
2185
|
-
bartlett, blackman, hamming, kaiser
|
|
2186
|
-
|
|
2187
|
-
Notes
|
|
2188
|
-
-----
|
|
2189
|
-
The Hanning window is defined as
|
|
2190
|
-
|
|
2191
|
-
.. math:: w(n) = 0.5 - 0.5cos\\left(\\frac{2\\pi{n}}{M-1}\\right)
|
|
2192
|
-
\\qquad 0 \\leq n \\leq M-1
|
|
2193
|
-
|
|
2194
|
-
The Hanning was named for Julius van Hann, an Austrian meteorologist.
|
|
2195
|
-
It is also known as the Cosine Bell. Some authors prefer that it be
|
|
2196
|
-
called a Hann window, to help avoid confusion with the very similar
|
|
2197
|
-
Hamming window.
|
|
2198
|
-
|
|
2199
|
-
Most references to the Hanning window come from the signal processing
|
|
2200
|
-
literature, where it is used as one of many windowing functions for
|
|
2201
|
-
smoothing values. It is also known as an apodization (which means
|
|
2202
|
-
"removing the foot", i.e. smoothing discontinuities at the beginning
|
|
2203
|
-
and end of the sampled signal) or tapering function.
|
|
2204
|
-
|
|
2205
|
-
References
|
|
2206
|
-
----------
|
|
2207
|
-
.. [1] Blackman, R.B. and Tukey, J.W., (1958) The measurement of power
|
|
2208
|
-
spectra, Dover Publications, New York.
|
|
2209
|
-
.. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics",
|
|
2210
|
-
The University of Alberta Press, 1975, pp. 106-108.
|
|
2211
|
-
.. [3] Wikipedia, "Window function",
|
|
2212
|
-
http://en.wikipedia.org/wiki/Window_function
|
|
2213
|
-
.. [4] W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling,
|
|
2214
|
-
"Numerical Recipes", Cambridge University Press, 1986, page 425.
|
|
2215
|
-
|
|
2216
|
-
Examples
|
|
2217
|
-
--------
|
|
2218
|
-
>>> np.hanning(12)
|
|
2219
|
-
array([ 0. , 0.07937323, 0.29229249, 0.57115742, 0.82743037,
|
|
2220
|
-
0.97974649, 0.97974649, 0.82743037, 0.57115742, 0.29229249,
|
|
2221
|
-
0.07937323, 0. ])
|
|
2222
|
-
|
|
2223
|
-
Plot the window and its frequency response:
|
|
2224
|
-
|
|
2225
|
-
>>> from numpy.fft import fft, fftshift
|
|
2226
|
-
>>> window = np.hanning(51)
|
|
2227
|
-
>>> plt.plot(window)
|
|
2228
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2229
|
-
>>> plt.title("Hann window")
|
|
2230
|
-
<matplotlib.text.Text object at 0x...>
|
|
2231
|
-
>>> plt.ylabel("Amplitude")
|
|
2232
|
-
<matplotlib.text.Text object at 0x...>
|
|
2233
|
-
>>> plt.xlabel("Sample")
|
|
2234
|
-
<matplotlib.text.Text object at 0x...>
|
|
2235
|
-
>>> plt.show()
|
|
2236
|
-
|
|
2237
|
-
>>> plt.figure()
|
|
2238
|
-
<matplotlib.figure.Figure object at 0x...>
|
|
2239
|
-
>>> A = fft(window, 2048) / 25.5
|
|
2240
|
-
>>> mag = np.abs(fftshift(A))
|
|
2241
|
-
>>> freq = np.linspace(-0.5, 0.5, len(A))
|
|
2242
|
-
>>> response = 20 * np.log10(mag)
|
|
2243
|
-
>>> response = np.clip(response, -100, 100)
|
|
2244
|
-
>>> plt.plot(freq, response)
|
|
2245
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2246
|
-
>>> plt.title("Frequency response of the Hann window")
|
|
2247
|
-
<matplotlib.text.Text object at 0x...>
|
|
2248
|
-
>>> plt.ylabel("Magnitude [dB]")
|
|
2249
|
-
<matplotlib.text.Text object at 0x...>
|
|
2250
|
-
>>> plt.xlabel("Normalized frequency [cycles per sample]")
|
|
2251
|
-
<matplotlib.text.Text object at 0x...>
|
|
2252
|
-
>>> plt.axis('tight')
|
|
2253
|
-
(-0.5, 0.5, -100.0, ...)
|
|
2254
|
-
>>> plt.show()
|
|
2255
|
-
|
|
2256
|
-
"""
|
|
2257
|
-
if M < 1:
|
|
2258
|
-
return array([])
|
|
2259
|
-
if M == 1:
|
|
2260
|
-
return ones(1, float)
|
|
2261
|
-
n = arange(0, M)
|
|
2262
|
-
return 0.5 - 0.5*cos(2.0*pi*n/(M-1))
|
|
2263
|
-
|
|
2264
|
-
|
|
2265
|
-
def hamming(M):
|
|
2266
|
-
"""
|
|
2267
|
-
Return the Hamming window.
|
|
2268
|
-
|
|
2269
|
-
The Hamming window is a taper formed by using a weighted cosine.
|
|
2270
|
-
|
|
2271
|
-
Parameters
|
|
2272
|
-
----------
|
|
2273
|
-
M : int
|
|
2274
|
-
Number of points in the output window. If zero or less, an
|
|
2275
|
-
empty array is returned.
|
|
2276
|
-
|
|
2277
|
-
Returns
|
|
2278
|
-
-------
|
|
2279
|
-
out : ndarray
|
|
2280
|
-
The window, with the maximum value normalized to one (the value
|
|
2281
|
-
one appears only if the number of samples is odd).
|
|
2282
|
-
|
|
2283
|
-
See Also
|
|
2284
|
-
--------
|
|
2285
|
-
bartlett, blackman, hanning, kaiser
|
|
2286
|
-
|
|
2287
|
-
Notes
|
|
2288
|
-
-----
|
|
2289
|
-
The Hamming window is defined as
|
|
2290
|
-
|
|
2291
|
-
.. math:: w(n) = 0.54 - 0.46cos\\left(\\frac{2\\pi{n}}{M-1}\\right)
|
|
2292
|
-
\\qquad 0 \\leq n \\leq M-1
|
|
2293
|
-
|
|
2294
|
-
The Hamming was named for R. W. Hamming, an associate of J. W. Tukey
|
|
2295
|
-
and is described in Blackman and Tukey. It was recommended for
|
|
2296
|
-
smoothing the truncated autocovariance function in the time domain.
|
|
2297
|
-
Most references to the Hamming window come from the signal processing
|
|
2298
|
-
literature, where it is used as one of many windowing functions for
|
|
2299
|
-
smoothing values. It is also known as an apodization (which means
|
|
2300
|
-
"removing the foot", i.e. smoothing discontinuities at the beginning
|
|
2301
|
-
and end of the sampled signal) or tapering function.
|
|
2302
|
-
|
|
2303
|
-
References
|
|
2304
|
-
----------
|
|
2305
|
-
.. [1] Blackman, R.B. and Tukey, J.W., (1958) The measurement of power
|
|
2306
|
-
spectra, Dover Publications, New York.
|
|
2307
|
-
.. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics", The
|
|
2308
|
-
University of Alberta Press, 1975, pp. 109-110.
|
|
2309
|
-
.. [3] Wikipedia, "Window function",
|
|
2310
|
-
http://en.wikipedia.org/wiki/Window_function
|
|
2311
|
-
.. [4] W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling,
|
|
2312
|
-
"Numerical Recipes", Cambridge University Press, 1986, page 425.
|
|
2313
|
-
|
|
2314
|
-
Examples
|
|
2315
|
-
--------
|
|
2316
|
-
>>> np.hamming(12)
|
|
2317
|
-
array([ 0.08 , 0.15302337, 0.34890909, 0.60546483, 0.84123594,
|
|
2318
|
-
0.98136677, 0.98136677, 0.84123594, 0.60546483, 0.34890909,
|
|
2319
|
-
0.15302337, 0.08 ])
|
|
2320
|
-
|
|
2321
|
-
Plot the window and the frequency response:
|
|
2322
|
-
|
|
2323
|
-
>>> from numpy.fft import fft, fftshift
|
|
2324
|
-
>>> window = np.hamming(51)
|
|
2325
|
-
>>> plt.plot(window)
|
|
2326
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2327
|
-
>>> plt.title("Hamming window")
|
|
2328
|
-
<matplotlib.text.Text object at 0x...>
|
|
2329
|
-
>>> plt.ylabel("Amplitude")
|
|
2330
|
-
<matplotlib.text.Text object at 0x...>
|
|
2331
|
-
>>> plt.xlabel("Sample")
|
|
2332
|
-
<matplotlib.text.Text object at 0x...>
|
|
2333
|
-
>>> plt.show()
|
|
2334
|
-
|
|
2335
|
-
>>> plt.figure()
|
|
2336
|
-
<matplotlib.figure.Figure object at 0x...>
|
|
2337
|
-
>>> A = fft(window, 2048) / 25.5
|
|
2338
|
-
>>> mag = np.abs(fftshift(A))
|
|
2339
|
-
>>> freq = np.linspace(-0.5, 0.5, len(A))
|
|
2340
|
-
>>> response = 20 * np.log10(mag)
|
|
2341
|
-
>>> response = np.clip(response, -100, 100)
|
|
2342
|
-
>>> plt.plot(freq, response)
|
|
2343
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2344
|
-
>>> plt.title("Frequency response of Hamming window")
|
|
2345
|
-
<matplotlib.text.Text object at 0x...>
|
|
2346
|
-
>>> plt.ylabel("Magnitude [dB]")
|
|
2347
|
-
<matplotlib.text.Text object at 0x...>
|
|
2348
|
-
>>> plt.xlabel("Normalized frequency [cycles per sample]")
|
|
2349
|
-
<matplotlib.text.Text object at 0x...>
|
|
2350
|
-
>>> plt.axis('tight')
|
|
2351
|
-
(-0.5, 0.5, -100.0, ...)
|
|
2352
|
-
>>> plt.show()
|
|
2353
|
-
|
|
2354
|
-
"""
|
|
2355
|
-
if M < 1:
|
|
2356
|
-
return array([])
|
|
2357
|
-
if M == 1:
|
|
2358
|
-
return ones(1, float)
|
|
2359
|
-
n = arange(0, M)
|
|
2360
|
-
return 0.54 - 0.46*cos(2.0*pi*n/(M-1))
|
|
2361
|
-
|
|
2362
|
-
## Code from cephes for i0
|
|
2363
|
-
|
|
2364
|
-
_i0A = [
|
|
2365
|
-
-4.41534164647933937950E-18,
|
|
2366
|
-
3.33079451882223809783E-17,
|
|
2367
|
-
-2.43127984654795469359E-16,
|
|
2368
|
-
1.71539128555513303061E-15,
|
|
2369
|
-
-1.16853328779934516808E-14,
|
|
2370
|
-
7.67618549860493561688E-14,
|
|
2371
|
-
-4.85644678311192946090E-13,
|
|
2372
|
-
2.95505266312963983461E-12,
|
|
2373
|
-
-1.72682629144155570723E-11,
|
|
2374
|
-
9.67580903537323691224E-11,
|
|
2375
|
-
-5.18979560163526290666E-10,
|
|
2376
|
-
2.65982372468238665035E-9,
|
|
2377
|
-
-1.30002500998624804212E-8,
|
|
2378
|
-
6.04699502254191894932E-8,
|
|
2379
|
-
-2.67079385394061173391E-7,
|
|
2380
|
-
1.11738753912010371815E-6,
|
|
2381
|
-
-4.41673835845875056359E-6,
|
|
2382
|
-
1.64484480707288970893E-5,
|
|
2383
|
-
-5.75419501008210370398E-5,
|
|
2384
|
-
1.88502885095841655729E-4,
|
|
2385
|
-
-5.76375574538582365885E-4,
|
|
2386
|
-
1.63947561694133579842E-3,
|
|
2387
|
-
-4.32430999505057594430E-3,
|
|
2388
|
-
1.05464603945949983183E-2,
|
|
2389
|
-
-2.37374148058994688156E-2,
|
|
2390
|
-
4.93052842396707084878E-2,
|
|
2391
|
-
-9.49010970480476444210E-2,
|
|
2392
|
-
1.71620901522208775349E-1,
|
|
2393
|
-
-3.04682672343198398683E-1,
|
|
2394
|
-
6.76795274409476084995E-1
|
|
2395
|
-
]
|
|
2396
|
-
|
|
2397
|
-
_i0B = [
|
|
2398
|
-
-7.23318048787475395456E-18,
|
|
2399
|
-
-4.83050448594418207126E-18,
|
|
2400
|
-
4.46562142029675999901E-17,
|
|
2401
|
-
3.46122286769746109310E-17,
|
|
2402
|
-
-2.82762398051658348494E-16,
|
|
2403
|
-
-3.42548561967721913462E-16,
|
|
2404
|
-
1.77256013305652638360E-15,
|
|
2405
|
-
3.81168066935262242075E-15,
|
|
2406
|
-
-9.55484669882830764870E-15,
|
|
2407
|
-
-4.15056934728722208663E-14,
|
|
2408
|
-
1.54008621752140982691E-14,
|
|
2409
|
-
3.85277838274214270114E-13,
|
|
2410
|
-
7.18012445138366623367E-13,
|
|
2411
|
-
-1.79417853150680611778E-12,
|
|
2412
|
-
-1.32158118404477131188E-11,
|
|
2413
|
-
-3.14991652796324136454E-11,
|
|
2414
|
-
1.18891471078464383424E-11,
|
|
2415
|
-
4.94060238822496958910E-10,
|
|
2416
|
-
3.39623202570838634515E-9,
|
|
2417
|
-
2.26666899049817806459E-8,
|
|
2418
|
-
2.04891858946906374183E-7,
|
|
2419
|
-
2.89137052083475648297E-6,
|
|
2420
|
-
6.88975834691682398426E-5,
|
|
2421
|
-
3.36911647825569408990E-3,
|
|
2422
|
-
8.04490411014108831608E-1
|
|
2423
|
-
]
|
|
2424
|
-
|
|
2425
|
-
|
|
2426
|
-
def _chbevl(x, vals):
|
|
2427
|
-
b0 = vals[0]
|
|
2428
|
-
b1 = 0.0
|
|
2429
|
-
|
|
2430
|
-
for i in range(1, len(vals)):
|
|
2431
|
-
b2 = b1
|
|
2432
|
-
b1 = b0
|
|
2433
|
-
b0 = x*b1 - b2 + vals[i]
|
|
2434
|
-
|
|
2435
|
-
return 0.5*(b0 - b2)
|
|
2436
|
-
|
|
2437
|
-
|
|
2438
|
-
def _i0_1(x):
|
|
2439
|
-
return exp(x) * _chbevl(x/2.0-2, _i0A)
|
|
2440
|
-
|
|
2441
|
-
|
|
2442
|
-
def _i0_2(x):
|
|
2443
|
-
return exp(x) * _chbevl(32.0/x - 2.0, _i0B) / sqrt(x)
|
|
2444
|
-
|
|
2445
|
-
|
|
2446
|
-
def i0(x):
|
|
2447
|
-
"""
|
|
2448
|
-
Modified Bessel function of the first kind, order 0.
|
|
2449
|
-
|
|
2450
|
-
Usually denoted :math:`I_0`. This function does broadcast, but will *not*
|
|
2451
|
-
"up-cast" int dtype arguments unless accompanied by at least one float or
|
|
2452
|
-
complex dtype argument (see Raises below).
|
|
2453
|
-
|
|
2454
|
-
Parameters
|
|
2455
|
-
----------
|
|
2456
|
-
x : array_like, dtype float or complex
|
|
2457
|
-
Argument of the Bessel function.
|
|
2458
|
-
|
|
2459
|
-
Returns
|
|
2460
|
-
-------
|
|
2461
|
-
out : ndarray, shape = x.shape, dtype = x.dtype
|
|
2462
|
-
The modified Bessel function evaluated at each of the elements of `x`.
|
|
2463
|
-
|
|
2464
|
-
Raises
|
|
2465
|
-
------
|
|
2466
|
-
TypeError: array cannot be safely cast to required type
|
|
2467
|
-
If argument consists exclusively of int dtypes.
|
|
2468
|
-
|
|
2469
|
-
See Also
|
|
2470
|
-
--------
|
|
2471
|
-
scipy.special.iv, scipy.special.ive
|
|
2472
|
-
|
|
2473
|
-
Notes
|
|
2474
|
-
-----
|
|
2475
|
-
We use the algorithm published by Clenshaw [1]_ and referenced by
|
|
2476
|
-
Abramowitz and Stegun [2]_, for which the function domain is
|
|
2477
|
-
partitioned into the two intervals [0,8] and (8,inf), and Chebyshev
|
|
2478
|
-
polynomial expansions are employed in each interval. Relative error on
|
|
2479
|
-
the domain [0,30] using IEEE arithmetic is documented [3]_ as having a
|
|
2480
|
-
peak of 5.8e-16 with an rms of 1.4e-16 (n = 30000).
|
|
2481
|
-
|
|
2482
|
-
References
|
|
2483
|
-
----------
|
|
2484
|
-
.. [1] C. W. Clenshaw, "Chebyshev series for mathematical functions", in
|
|
2485
|
-
*National Physical Laboratory Mathematical Tables*, vol. 5, London:
|
|
2486
|
-
Her Majesty's Stationery Office, 1962.
|
|
2487
|
-
.. [2] M. Abramowitz and I. A. Stegun, *Handbook of Mathematical
|
|
2488
|
-
Functions*, 10th printing, New York: Dover, 1964, pp. 379.
|
|
2489
|
-
http://www.math.sfu.ca/~cbm/aands/page_379.htm
|
|
2490
|
-
.. [3] http://kobesearch.cpan.org/htdocs/Math-Cephes/Math/Cephes.html
|
|
2491
|
-
|
|
2492
|
-
Examples
|
|
2493
|
-
--------
|
|
2494
|
-
>>> np.i0([0.])
|
|
2495
|
-
array(1.0)
|
|
2496
|
-
>>> np.i0([0., 1. + 2j])
|
|
2497
|
-
array([ 1.00000000+0.j , 0.18785373+0.64616944j])
|
|
2498
|
-
|
|
2499
|
-
"""
|
|
2500
|
-
x = atleast_1d(x).copy()
|
|
2501
|
-
y = empty_like(x)
|
|
2502
|
-
ind = (x < 0)
|
|
2503
|
-
x[ind] = -x[ind]
|
|
2504
|
-
ind = (x <= 8.0)
|
|
2505
|
-
y[ind] = _i0_1(x[ind])
|
|
2506
|
-
ind2 = ~ind
|
|
2507
|
-
y[ind2] = _i0_2(x[ind2])
|
|
2508
|
-
return y.squeeze()
|
|
2509
|
-
|
|
2510
|
-
## End of cephes code for i0
|
|
2511
|
-
|
|
2512
|
-
|
|
2513
|
-
def kaiser(M, beta):
|
|
2514
|
-
"""
|
|
2515
|
-
Return the Kaiser window.
|
|
2516
|
-
|
|
2517
|
-
The Kaiser window is a taper formed by using a Bessel function.
|
|
2518
|
-
|
|
2519
|
-
Parameters
|
|
2520
|
-
----------
|
|
2521
|
-
M : int
|
|
2522
|
-
Number of points in the output window. If zero or less, an
|
|
2523
|
-
empty array is returned.
|
|
2524
|
-
beta : float
|
|
2525
|
-
Shape parameter for window.
|
|
2526
|
-
|
|
2527
|
-
Returns
|
|
2528
|
-
-------
|
|
2529
|
-
out : array
|
|
2530
|
-
The window, with the maximum value normalized to one (the value
|
|
2531
|
-
one appears only if the number of samples is odd).
|
|
2532
|
-
|
|
2533
|
-
See Also
|
|
2534
|
-
--------
|
|
2535
|
-
bartlett, blackman, hamming, hanning
|
|
2536
|
-
|
|
2537
|
-
Notes
|
|
2538
|
-
-----
|
|
2539
|
-
The Kaiser window is defined as
|
|
2540
|
-
|
|
2541
|
-
.. math:: w(n) = I_0\\left( \\beta \\sqrt{1-\\frac{4n^2}{(M-1)^2}}
|
|
2542
|
-
\\right)/I_0(\\beta)
|
|
2543
|
-
|
|
2544
|
-
with
|
|
2545
|
-
|
|
2546
|
-
.. math:: \\quad -\\frac{M-1}{2} \\leq n \\leq \\frac{M-1}{2},
|
|
2547
|
-
|
|
2548
|
-
where :math:`I_0` is the modified zeroth-order Bessel function.
|
|
2549
|
-
|
|
2550
|
-
The Kaiser was named for Jim Kaiser, who discovered a simple
|
|
2551
|
-
approximation to the DPSS window based on Bessel functions. The Kaiser
|
|
2552
|
-
window is a very good approximation to the Digital Prolate Spheroidal
|
|
2553
|
-
Sequence, or Slepian window, which is the transform which maximizes the
|
|
2554
|
-
energy in the main lobe of the window relative to total energy.
|
|
2555
|
-
|
|
2556
|
-
The Kaiser can approximate many other windows by varying the beta
|
|
2557
|
-
parameter.
|
|
2558
|
-
|
|
2559
|
-
==== =======================
|
|
2560
|
-
beta Window shape
|
|
2561
|
-
==== =======================
|
|
2562
|
-
0 Rectangular
|
|
2563
|
-
5 Similar to a Hamming
|
|
2564
|
-
6 Similar to a Hanning
|
|
2565
|
-
8.6 Similar to a Blackman
|
|
2566
|
-
==== =======================
|
|
2567
|
-
|
|
2568
|
-
A beta value of 14 is probably a good starting point. Note that as beta
|
|
2569
|
-
gets large, the window narrows, and so the number of samples needs to be
|
|
2570
|
-
large enough to sample the increasingly narrow spike, otherwise NaNs will
|
|
2571
|
-
get returned.
|
|
2572
|
-
|
|
2573
|
-
Most references to the Kaiser window come from the signal processing
|
|
2574
|
-
literature, where it is used as one of many windowing functions for
|
|
2575
|
-
smoothing values. It is also known as an apodization (which means
|
|
2576
|
-
"removing the foot", i.e. smoothing discontinuities at the beginning
|
|
2577
|
-
and end of the sampled signal) or tapering function.
|
|
2578
|
-
|
|
2579
|
-
References
|
|
2580
|
-
----------
|
|
2581
|
-
.. [1] J. F. Kaiser, "Digital Filters" - Ch 7 in "Systems analysis by
|
|
2582
|
-
digital computer", Editors: F.F. Kuo and J.F. Kaiser, p 218-285.
|
|
2583
|
-
John Wiley and Sons, New York, (1966).
|
|
2584
|
-
.. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics", The
|
|
2585
|
-
University of Alberta Press, 1975, pp. 177-178.
|
|
2586
|
-
.. [3] Wikipedia, "Window function",
|
|
2587
|
-
http://en.wikipedia.org/wiki/Window_function
|
|
2588
|
-
|
|
2589
|
-
Examples
|
|
2590
|
-
--------
|
|
2591
|
-
>>> np.kaiser(12, 14)
|
|
2592
|
-
array([ 7.72686684e-06, 3.46009194e-03, 4.65200189e-02,
|
|
2593
|
-
2.29737120e-01, 5.99885316e-01, 9.45674898e-01,
|
|
2594
|
-
9.45674898e-01, 5.99885316e-01, 2.29737120e-01,
|
|
2595
|
-
4.65200189e-02, 3.46009194e-03, 7.72686684e-06])
|
|
2596
|
-
|
|
2597
|
-
|
|
2598
|
-
Plot the window and the frequency response:
|
|
2599
|
-
|
|
2600
|
-
>>> from numpy.fft import fft, fftshift
|
|
2601
|
-
>>> window = np.kaiser(51, 14)
|
|
2602
|
-
>>> plt.plot(window)
|
|
2603
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2604
|
-
>>> plt.title("Kaiser window")
|
|
2605
|
-
<matplotlib.text.Text object at 0x...>
|
|
2606
|
-
>>> plt.ylabel("Amplitude")
|
|
2607
|
-
<matplotlib.text.Text object at 0x...>
|
|
2608
|
-
>>> plt.xlabel("Sample")
|
|
2609
|
-
<matplotlib.text.Text object at 0x...>
|
|
2610
|
-
>>> plt.show()
|
|
2611
|
-
|
|
2612
|
-
>>> plt.figure()
|
|
2613
|
-
<matplotlib.figure.Figure object at 0x...>
|
|
2614
|
-
>>> A = fft(window, 2048) / 25.5
|
|
2615
|
-
>>> mag = np.abs(fftshift(A))
|
|
2616
|
-
>>> freq = np.linspace(-0.5, 0.5, len(A))
|
|
2617
|
-
>>> response = 20 * np.log10(mag)
|
|
2618
|
-
>>> response = np.clip(response, -100, 100)
|
|
2619
|
-
>>> plt.plot(freq, response)
|
|
2620
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2621
|
-
>>> plt.title("Frequency response of Kaiser window")
|
|
2622
|
-
<matplotlib.text.Text object at 0x...>
|
|
2623
|
-
>>> plt.ylabel("Magnitude [dB]")
|
|
2624
|
-
<matplotlib.text.Text object at 0x...>
|
|
2625
|
-
>>> plt.xlabel("Normalized frequency [cycles per sample]")
|
|
2626
|
-
<matplotlib.text.Text object at 0x...>
|
|
2627
|
-
>>> plt.axis('tight')
|
|
2628
|
-
(-0.5, 0.5, -100.0, ...)
|
|
2629
|
-
>>> plt.show()
|
|
2630
|
-
|
|
2631
|
-
"""
|
|
2632
|
-
from numpy.dual import i0
|
|
2633
|
-
if M == 1:
|
|
2634
|
-
return np.array([1.])
|
|
2635
|
-
n = arange(0, M)
|
|
2636
|
-
alpha = (M-1)/2.0
|
|
2637
|
-
return i0(beta * sqrt(1-((n-alpha)/alpha)**2.0))/i0(float(beta))
|
|
2638
|
-
|
|
2639
|
-
|
|
2640
|
-
def sinc(x):
|
|
2641
|
-
"""
|
|
2642
|
-
Return the sinc function.
|
|
2643
|
-
|
|
2644
|
-
The sinc function is :math:`\\sin(\\pi x)/(\\pi x)`.
|
|
2645
|
-
|
|
2646
|
-
Parameters
|
|
2647
|
-
----------
|
|
2648
|
-
x : ndarray
|
|
2649
|
-
Array (possibly multi-dimensional) of values for which to to
|
|
2650
|
-
calculate ``sinc(x)``.
|
|
2651
|
-
|
|
2652
|
-
Returns
|
|
2653
|
-
-------
|
|
2654
|
-
out : ndarray
|
|
2655
|
-
``sinc(x)``, which has the same shape as the input.
|
|
2656
|
-
|
|
2657
|
-
Notes
|
|
2658
|
-
-----
|
|
2659
|
-
``sinc(0)`` is the limit value 1.
|
|
2660
|
-
|
|
2661
|
-
The name sinc is short for "sine cardinal" or "sinus cardinalis".
|
|
2662
|
-
|
|
2663
|
-
The sinc function is used in various signal processing applications,
|
|
2664
|
-
including in anti-aliasing, in the construction of a Lanczos resampling
|
|
2665
|
-
filter, and in interpolation.
|
|
2666
|
-
|
|
2667
|
-
For bandlimited interpolation of discrete-time signals, the ideal
|
|
2668
|
-
interpolation kernel is proportional to the sinc function.
|
|
2669
|
-
|
|
2670
|
-
References
|
|
2671
|
-
----------
|
|
2672
|
-
.. [1] Weisstein, Eric W. "Sinc Function." From MathWorld--A Wolfram Web
|
|
2673
|
-
Resource. http://mathworld.wolfram.com/SincFunction.html
|
|
2674
|
-
.. [2] Wikipedia, "Sinc function",
|
|
2675
|
-
http://en.wikipedia.org/wiki/Sinc_function
|
|
2676
|
-
|
|
2677
|
-
Examples
|
|
2678
|
-
--------
|
|
2679
|
-
>>> x = np.linspace(-4, 4, 41)
|
|
2680
|
-
>>> np.sinc(x)
|
|
2681
|
-
array([ -3.89804309e-17, -4.92362781e-02, -8.40918587e-02,
|
|
2682
|
-
-8.90384387e-02, -5.84680802e-02, 3.89804309e-17,
|
|
2683
|
-
6.68206631e-02, 1.16434881e-01, 1.26137788e-01,
|
|
2684
|
-
8.50444803e-02, -3.89804309e-17, -1.03943254e-01,
|
|
2685
|
-
-1.89206682e-01, -2.16236208e-01, -1.55914881e-01,
|
|
2686
|
-
3.89804309e-17, 2.33872321e-01, 5.04551152e-01,
|
|
2687
|
-
7.56826729e-01, 9.35489284e-01, 1.00000000e+00,
|
|
2688
|
-
9.35489284e-01, 7.56826729e-01, 5.04551152e-01,
|
|
2689
|
-
2.33872321e-01, 3.89804309e-17, -1.55914881e-01,
|
|
2690
|
-
-2.16236208e-01, -1.89206682e-01, -1.03943254e-01,
|
|
2691
|
-
-3.89804309e-17, 8.50444803e-02, 1.26137788e-01,
|
|
2692
|
-
1.16434881e-01, 6.68206631e-02, 3.89804309e-17,
|
|
2693
|
-
-5.84680802e-02, -8.90384387e-02, -8.40918587e-02,
|
|
2694
|
-
-4.92362781e-02, -3.89804309e-17])
|
|
2695
|
-
|
|
2696
|
-
>>> plt.plot(x, np.sinc(x))
|
|
2697
|
-
[<matplotlib.lines.Line2D object at 0x...>]
|
|
2698
|
-
>>> plt.title("Sinc Function")
|
|
2699
|
-
<matplotlib.text.Text object at 0x...>
|
|
2700
|
-
>>> plt.ylabel("Amplitude")
|
|
2701
|
-
<matplotlib.text.Text object at 0x...>
|
|
2702
|
-
>>> plt.xlabel("X")
|
|
2703
|
-
<matplotlib.text.Text object at 0x...>
|
|
2704
|
-
>>> plt.show()
|
|
2705
|
-
|
|
2706
|
-
It works in 2-D as well:
|
|
2707
|
-
|
|
2708
|
-
>>> x = np.linspace(-4, 4, 401)
|
|
2709
|
-
>>> xx = np.outer(x, x)
|
|
2710
|
-
>>> plt.imshow(np.sinc(xx))
|
|
2711
|
-
<matplotlib.image.AxesImage object at 0x...>
|
|
2712
|
-
|
|
2713
|
-
"""
|
|
2714
|
-
x = np.asanyarray(x)
|
|
2715
|
-
y = pi * where(x == 0, 1.0e-20, x)
|
|
2716
|
-
return sin(y)/y
|
|
2717
|
-
|
|
2718
|
-
|
|
2719
|
-
def msort(a):
|
|
2720
|
-
"""
|
|
2721
|
-
Return a copy of an array sorted along the first axis.
|
|
2722
|
-
|
|
2723
|
-
Parameters
|
|
2724
|
-
----------
|
|
2725
|
-
a : array_like
|
|
2726
|
-
Array to be sorted.
|
|
2727
|
-
|
|
2728
|
-
Returns
|
|
2729
|
-
-------
|
|
2730
|
-
sorted_array : ndarray
|
|
2731
|
-
Array of the same type and shape as `a`.
|
|
2732
|
-
|
|
2733
|
-
See Also
|
|
2734
|
-
--------
|
|
2735
|
-
sort
|
|
2736
|
-
|
|
2737
|
-
Notes
|
|
2738
|
-
-----
|
|
2739
|
-
``np.msort(a)`` is equivalent to ``np.sort(a, axis=0)``.
|
|
2740
|
-
|
|
2741
|
-
"""
|
|
2742
|
-
b = array(a, subok=True, copy=True)
|
|
2743
|
-
b.sort(0)
|
|
2744
|
-
return b
|
|
2745
|
-
|
|
2746
|
-
|
|
2747
|
-
def _ureduce(a, func, **kwargs):
|
|
2748
|
-
"""
|
|
2749
|
-
Internal Function.
|
|
2750
|
-
Call `func` with `a` as first argument swapping the axes to use extended
|
|
2751
|
-
axis on functions that don't support it natively.
|
|
2752
|
-
|
|
2753
|
-
Returns result and a.shape with axis dims set to 1.
|
|
2754
|
-
|
|
2755
|
-
Parameters
|
|
2756
|
-
----------
|
|
2757
|
-
a : array_like
|
|
2758
|
-
Input array or object that can be converted to an array.
|
|
2759
|
-
func : callable
|
|
2760
|
-
Reduction function Kapable of receiving an axis argument.
|
|
2761
|
-
It is is called with `a` as first argument followed by `kwargs`.
|
|
2762
|
-
kwargs : keyword arguments
|
|
2763
|
-
additional keyword arguments to pass to `func`.
|
|
2764
|
-
|
|
2765
|
-
Returns
|
|
2766
|
-
-------
|
|
2767
|
-
result : tuple
|
|
2768
|
-
Result of func(a, **kwargs) and a.shape with axis dims set to 1
|
|
2769
|
-
which can be used to reshape the result to the same shape a ufunc with
|
|
2770
|
-
keepdims=True would produce.
|
|
2771
|
-
|
|
2772
|
-
"""
|
|
2773
|
-
a = np.asanyarray(a)
|
|
2774
|
-
axis = kwargs.get('axis', None)
|
|
2775
|
-
if axis is not None:
|
|
2776
|
-
keepdim = list(a.shape)
|
|
2777
|
-
nd = a.ndim
|
|
2778
|
-
try:
|
|
2779
|
-
axis = operator.index(axis)
|
|
2780
|
-
if axis >= nd or axis < -nd:
|
|
2781
|
-
raise IndexError("axis %d out of bounds (%d)" % (axis, a.ndim))
|
|
2782
|
-
keepdim[axis] = 1
|
|
2783
|
-
except TypeError:
|
|
2784
|
-
sax = set()
|
|
2785
|
-
for x in axis:
|
|
2786
|
-
if x >= nd or x < -nd:
|
|
2787
|
-
raise IndexError("axis %d out of bounds (%d)" % (x, nd))
|
|
2788
|
-
if x in sax:
|
|
2789
|
-
raise ValueError("duplicate value in axis")
|
|
2790
|
-
sax.add(x % nd)
|
|
2791
|
-
keepdim[x] = 1
|
|
2792
|
-
keep = sax.symmetric_difference(frozenset(range(nd)))
|
|
2793
|
-
nkeep = len(keep)
|
|
2794
|
-
# swap axis that should not be reduced to front
|
|
2795
|
-
for i, s in enumerate(sorted(keep)):
|
|
2796
|
-
a = a.swapaxes(i, s)
|
|
2797
|
-
# merge reduced axis
|
|
2798
|
-
a = a.reshape(a.shape[:nkeep] + (-1,))
|
|
2799
|
-
kwargs['axis'] = -1
|
|
2800
|
-
else:
|
|
2801
|
-
keepdim = [1] * a.ndim
|
|
2802
|
-
|
|
2803
|
-
r = func(a, **kwargs)
|
|
2804
|
-
return r, keepdim
|
|
2805
|
-
|
|
2806
|
-
|
|
2807
|
-
def median(a, axis=None, out=None, overwrite_input=False, keepdims=False):
|
|
2808
|
-
"""
|
|
2809
|
-
Compute the median along the specified axis.
|
|
2810
|
-
|
|
2811
|
-
Returns the median of the array elements.
|
|
2812
|
-
|
|
2813
|
-
Parameters
|
|
2814
|
-
----------
|
|
2815
|
-
a : array_like
|
|
2816
|
-
Input array or object that can be converted to an array.
|
|
2817
|
-
axis : int or sequence of int, optional
|
|
2818
|
-
Axis along which the medians are computed. The default (axis=None)
|
|
2819
|
-
is to compute the median along a flattened version of the array.
|
|
2820
|
-
A sequence of axes is supported since version 1.9.0.
|
|
2821
|
-
out : ndarray, optional
|
|
2822
|
-
Alternative output array in which to place the result. It must have
|
|
2823
|
-
the same shape and buffer length as the expected output, but the
|
|
2824
|
-
type (of the output) will be cast if necessary.
|
|
2825
|
-
overwrite_input : bool, optional
|
|
2826
|
-
If True, then allow use of memory of input array (a) for
|
|
2827
|
-
calculations. The input array will be modified by the call to
|
|
2828
|
-
median. This will save memory when you do not need to preserve the
|
|
2829
|
-
contents of the input array. Treat the input as undefined, but it
|
|
2830
|
-
will probably be fully or partially sorted. Default is False. Note
|
|
2831
|
-
that, if `overwrite_input` is True and the input is not already an
|
|
2832
|
-
ndarray, an error will be raised.
|
|
2833
|
-
keepdims : bool, optional
|
|
2834
|
-
If this is set to True, the axes which are reduced are left
|
|
2835
|
-
in the result as dimensions with size one. With this option,
|
|
2836
|
-
the result will broadcast correctly against the original `arr`.
|
|
2837
|
-
|
|
2838
|
-
.. versionadded:: 1.9.0
|
|
2839
|
-
|
|
2840
|
-
|
|
2841
|
-
Returns
|
|
2842
|
-
-------
|
|
2843
|
-
median : ndarray
|
|
2844
|
-
A new array holding the result (unless `out` is specified, in which
|
|
2845
|
-
case that array is returned instead). If the input contains
|
|
2846
|
-
integers, or floats of smaller precision than 64, then the output
|
|
2847
|
-
data-type is float64. Otherwise, the output data-type is the same
|
|
2848
|
-
as that of the input.
|
|
2849
|
-
|
|
2850
|
-
See Also
|
|
2851
|
-
--------
|
|
2852
|
-
mean, percentile
|
|
2853
|
-
|
|
2854
|
-
Notes
|
|
2855
|
-
-----
|
|
2856
|
-
Given a vector V of length N, the median of V is the middle value of
|
|
2857
|
-
a sorted copy of V, ``V_sorted`` - i.e., ``V_sorted[(N-1)/2]``, when N is
|
|
2858
|
-
odd. When N is even, it is the average of the two middle values of
|
|
2859
|
-
``V_sorted``.
|
|
2860
|
-
|
|
2861
|
-
Examples
|
|
2862
|
-
--------
|
|
2863
|
-
>>> a = np.array([[10, 7, 4], [3, 2, 1]])
|
|
2864
|
-
>>> a
|
|
2865
|
-
array([[10, 7, 4],
|
|
2866
|
-
[ 3, 2, 1]])
|
|
2867
|
-
>>> np.median(a)
|
|
2868
|
-
3.5
|
|
2869
|
-
>>> np.median(a, axis=0)
|
|
2870
|
-
array([ 6.5, 4.5, 2.5])
|
|
2871
|
-
>>> np.median(a, axis=1)
|
|
2872
|
-
array([ 7., 2.])
|
|
2873
|
-
>>> m = np.median(a, axis=0)
|
|
2874
|
-
>>> out = np.zeros_like(m)
|
|
2875
|
-
>>> np.median(a, axis=0, out=m)
|
|
2876
|
-
array([ 6.5, 4.5, 2.5])
|
|
2877
|
-
>>> m
|
|
2878
|
-
array([ 6.5, 4.5, 2.5])
|
|
2879
|
-
>>> b = a.copy()
|
|
2880
|
-
>>> np.median(b, axis=1, overwrite_input=True)
|
|
2881
|
-
array([ 7., 2.])
|
|
2882
|
-
>>> assert not np.all(a==b)
|
|
2883
|
-
>>> b = a.copy()
|
|
2884
|
-
>>> np.median(b, axis=None, overwrite_input=True)
|
|
2885
|
-
3.5
|
|
2886
|
-
>>> assert not np.all(a==b)
|
|
2887
|
-
|
|
2888
|
-
"""
|
|
2889
|
-
r, k = _ureduce(a, func=_median, axis=axis, out=out,
|
|
2890
|
-
overwrite_input=overwrite_input)
|
|
2891
|
-
if keepdims:
|
|
2892
|
-
return r.reshape(k)
|
|
2893
|
-
else:
|
|
2894
|
-
return r
|
|
2895
|
-
|
|
2896
|
-
def _median(a, axis=None, out=None, overwrite_input=False):
|
|
2897
|
-
# can't be reasonably be implemented in terms of percentile as we have to
|
|
2898
|
-
# call mean to not break astropy
|
|
2899
|
-
a = np.asanyarray(a)
|
|
2900
|
-
if axis is not None and axis >= a.ndim:
|
|
2901
|
-
raise IndexError(
|
|
2902
|
-
"axis %d out of bounds (%d)" % (axis, a.ndim))
|
|
2903
|
-
|
|
2904
|
-
if overwrite_input:
|
|
2905
|
-
if axis is None:
|
|
2906
|
-
part = a.ravel()
|
|
2907
|
-
sz = part.size
|
|
2908
|
-
if sz % 2 == 0:
|
|
2909
|
-
szh = sz // 2
|
|
2910
|
-
part.partition((szh - 1, szh))
|
|
2911
|
-
else:
|
|
2912
|
-
part.partition((sz - 1) // 2)
|
|
2913
|
-
else:
|
|
2914
|
-
sz = a.shape[axis]
|
|
2915
|
-
if sz % 2 == 0:
|
|
2916
|
-
szh = sz // 2
|
|
2917
|
-
a.partition((szh - 1, szh), axis=axis)
|
|
2918
|
-
else:
|
|
2919
|
-
a.partition((sz - 1) // 2, axis=axis)
|
|
2920
|
-
part = a
|
|
2921
|
-
else:
|
|
2922
|
-
if axis is None:
|
|
2923
|
-
sz = a.size
|
|
2924
|
-
else:
|
|
2925
|
-
sz = a.shape[axis]
|
|
2926
|
-
if sz % 2 == 0:
|
|
2927
|
-
part = partition(a, ((sz // 2) - 1, sz // 2), axis=axis)
|
|
2928
|
-
else:
|
|
2929
|
-
part = partition(a, (sz - 1) // 2, axis=axis)
|
|
2930
|
-
if part.shape == ():
|
|
2931
|
-
# make 0-D arrays work
|
|
2932
|
-
return part.item()
|
|
2933
|
-
if axis is None:
|
|
2934
|
-
axis = 0
|
|
2935
|
-
indexer = [slice(None)] * part.ndim
|
|
2936
|
-
index = part.shape[axis] // 2
|
|
2937
|
-
if part.shape[axis] % 2 == 1:
|
|
2938
|
-
# index with slice to allow mean (below) to work
|
|
2939
|
-
indexer[axis] = slice(index, index+1)
|
|
2940
|
-
else:
|
|
2941
|
-
indexer[axis] = slice(index-1, index+1)
|
|
2942
|
-
# Use mean in odd and even case to coerce data type
|
|
2943
|
-
# and check, use out array.
|
|
2944
|
-
return mean(part[indexer], axis=axis, out=out)
|
|
2945
|
-
|
|
2946
|
-
|
|
2947
|
-
def percentile(a, q, axis=None, out=None,
|
|
2948
|
-
overwrite_input=False, interpolation='linear', keepdims=False):
|
|
2949
|
-
"""
|
|
2950
|
-
Compute the qth percentile of the data along the specified axis.
|
|
2951
|
-
|
|
2952
|
-
Returns the qth percentile of the array elements.
|
|
2953
|
-
|
|
2954
|
-
Parameters
|
|
2955
|
-
----------
|
|
2956
|
-
a : array_like
|
|
2957
|
-
Input array or object that can be converted to an array.
|
|
2958
|
-
q : float in range of [0,100] (or sequence of floats)
|
|
2959
|
-
Percentile to compute which must be between 0 and 100 inclusive.
|
|
2960
|
-
axis : int or sequence of int, optional
|
|
2961
|
-
Axis along which the percentiles are computed. The default (None)
|
|
2962
|
-
is to compute the percentiles along a flattened version of the array.
|
|
2963
|
-
A sequence of axes is supported since version 1.9.0.
|
|
2964
|
-
out : ndarray, optional
|
|
2965
|
-
Alternative output array in which to place the result. It must
|
|
2966
|
-
have the same shape and buffer length as the expected output,
|
|
2967
|
-
but the type (of the output) will be cast if necessary.
|
|
2968
|
-
overwrite_input : bool, optional
|
|
2969
|
-
If True, then allow use of memory of input array `a` for
|
|
2970
|
-
calculations. The input array will be modified by the call to
|
|
2971
|
-
percentile. This will save memory when you do not need to preserve
|
|
2972
|
-
the contents of the input array. In this case you should not make
|
|
2973
|
-
any assumptions about the content of the passed in array `a` after
|
|
2974
|
-
this function completes -- treat it as undefined. Default is False.
|
|
2975
|
-
Note that, if the `a` input is not already an array this parameter
|
|
2976
|
-
will have no effect, `a` will be converted to an array internally
|
|
2977
|
-
regardless of the value of this parameter.
|
|
2978
|
-
interpolation : {'linear', 'lower', 'higher', 'midpoint', 'nearest'}
|
|
2979
|
-
This optional parameter specifies the interpolation method to use,
|
|
2980
|
-
when the desired quantile lies between two data points `i` and `j`:
|
|
2981
|
-
* linear: `i + (j - i) * fraction`, where `fraction` is the
|
|
2982
|
-
fractional part of the index surrounded by `i` and `j`.
|
|
2983
|
-
* lower: `i`.
|
|
2984
|
-
* higher: `j`.
|
|
2985
|
-
* nearest: `i` or `j` whichever is nearest.
|
|
2986
|
-
* midpoint: (`i` + `j`) / 2.
|
|
2987
|
-
|
|
2988
|
-
.. versionadded:: 1.9.0
|
|
2989
|
-
keepdims : bool, optional
|
|
2990
|
-
If this is set to True, the axes which are reduced are left
|
|
2991
|
-
in the result as dimensions with size one. With this option,
|
|
2992
|
-
the result will broadcast correctly against the original `arr`.
|
|
2993
|
-
|
|
2994
|
-
.. versionadded:: 1.9.0
|
|
2995
|
-
|
|
2996
|
-
Returns
|
|
2997
|
-
-------
|
|
2998
|
-
percentile : scalar or ndarray
|
|
2999
|
-
If a single percentile `q` is given and axis=None a scalar is
|
|
3000
|
-
returned. If multiple percentiles `q` are given an array holding
|
|
3001
|
-
the result is returned. The results are listed in the first axis.
|
|
3002
|
-
(If `out` is specified, in which case that array is returned
|
|
3003
|
-
instead). If the input contains integers, or floats of smaller
|
|
3004
|
-
precision than 64, then the output data-type is float64. Otherwise,
|
|
3005
|
-
the output data-type is the same as that of the input.
|
|
3006
|
-
|
|
3007
|
-
See Also
|
|
3008
|
-
--------
|
|
3009
|
-
mean, median
|
|
3010
|
-
|
|
3011
|
-
Notes
|
|
3012
|
-
-----
|
|
3013
|
-
Given a vector V of length N, the q-th percentile of V is the q-th ranked
|
|
3014
|
-
value in a sorted copy of V. The values and distances of the two
|
|
3015
|
-
nearest neighbors as well as the `interpolation` parameter will
|
|
3016
|
-
determine the percentile if the normalized ranking does not match q
|
|
3017
|
-
exactly. This function is the same as the median if ``q=50``, the same
|
|
3018
|
-
as the minimum if ``q=0`` and the same as the maximum if ``q=100``.
|
|
3019
|
-
|
|
3020
|
-
Examples
|
|
3021
|
-
--------
|
|
3022
|
-
>>> a = np.array([[10, 7, 4], [3, 2, 1]])
|
|
3023
|
-
>>> a
|
|
3024
|
-
array([[10, 7, 4],
|
|
3025
|
-
[ 3, 2, 1]])
|
|
3026
|
-
>>> np.percentile(a, 50)
|
|
3027
|
-
array([ 3.5])
|
|
3028
|
-
>>> np.percentile(a, 50, axis=0)
|
|
3029
|
-
array([[ 6.5, 4.5, 2.5]])
|
|
3030
|
-
>>> np.percentile(a, 50, axis=1)
|
|
3031
|
-
array([[ 7.],
|
|
3032
|
-
[ 2.]])
|
|
3033
|
-
|
|
3034
|
-
>>> m = np.percentile(a, 50, axis=0)
|
|
3035
|
-
>>> out = np.zeros_like(m)
|
|
3036
|
-
>>> np.percentile(a, 50, axis=0, out=m)
|
|
3037
|
-
array([[ 6.5, 4.5, 2.5]])
|
|
3038
|
-
>>> m
|
|
3039
|
-
array([[ 6.5, 4.5, 2.5]])
|
|
3040
|
-
|
|
3041
|
-
>>> b = a.copy()
|
|
3042
|
-
>>> np.percentile(b, 50, axis=1, overwrite_input=True)
|
|
3043
|
-
array([[ 7.],
|
|
3044
|
-
[ 2.]])
|
|
3045
|
-
>>> assert not np.all(a==b)
|
|
3046
|
-
>>> b = a.copy()
|
|
3047
|
-
>>> np.percentile(b, 50, axis=None, overwrite_input=True)
|
|
3048
|
-
array([ 3.5])
|
|
3049
|
-
|
|
3050
|
-
"""
|
|
3051
|
-
q = array(q, dtype=np.float64, copy=True)
|
|
3052
|
-
r, k = _ureduce(a, func=_percentile, q=q, axis=axis, out=out,
|
|
3053
|
-
overwrite_input=overwrite_input,
|
|
3054
|
-
interpolation=interpolation)
|
|
3055
|
-
if keepdims:
|
|
3056
|
-
if q.ndim == 0:
|
|
3057
|
-
return r.reshape(k)
|
|
3058
|
-
else:
|
|
3059
|
-
return r.reshape([len(q)] + k)
|
|
3060
|
-
else:
|
|
3061
|
-
return r
|
|
3062
|
-
|
|
3063
|
-
|
|
3064
|
-
def _percentile(a, q, axis=None, out=None,
|
|
3065
|
-
overwrite_input=False, interpolation='linear', keepdims=False):
|
|
3066
|
-
a = asarray(a)
|
|
3067
|
-
if q.ndim == 0:
|
|
3068
|
-
# Do not allow 0-d arrays because following code fails for scalar
|
|
3069
|
-
zerod = True
|
|
3070
|
-
q = q[None]
|
|
3071
|
-
else:
|
|
3072
|
-
zerod = False
|
|
3073
|
-
|
|
3074
|
-
# avoid expensive reductions, relevant for arrays with < O(1000) elements
|
|
3075
|
-
if q.size < 10:
|
|
3076
|
-
for i in range(q.size):
|
|
3077
|
-
if q[i] < 0. or q[i] > 100.:
|
|
3078
|
-
raise ValueError("Percentiles must be in the range [0,100]")
|
|
3079
|
-
q[i] /= 100.
|
|
3080
|
-
else:
|
|
3081
|
-
# faster than any()
|
|
3082
|
-
if np.count_nonzero(q < 0.) or np.count_nonzero(q > 100.):
|
|
3083
|
-
raise ValueError("Percentiles must be in the range [0,100]")
|
|
3084
|
-
q /= 100.
|
|
3085
|
-
|
|
3086
|
-
# prepare a for partioning
|
|
3087
|
-
if overwrite_input:
|
|
3088
|
-
if axis is None:
|
|
3089
|
-
ap = a.ravel()
|
|
3090
|
-
else:
|
|
3091
|
-
ap = a
|
|
3092
|
-
else:
|
|
3093
|
-
if axis is None:
|
|
3094
|
-
ap = a.flatten()
|
|
3095
|
-
else:
|
|
3096
|
-
ap = a.copy()
|
|
3097
|
-
|
|
3098
|
-
if axis is None:
|
|
3099
|
-
axis = 0
|
|
3100
|
-
|
|
3101
|
-
Nx = ap.shape[axis]
|
|
3102
|
-
indices = q * (Nx - 1)
|
|
3103
|
-
|
|
3104
|
-
# round fractional indices according to interpolation method
|
|
3105
|
-
if interpolation == 'lower':
|
|
3106
|
-
indices = floor(indices).astype(intp)
|
|
3107
|
-
elif interpolation == 'higher':
|
|
3108
|
-
indices = ceil(indices).astype(intp)
|
|
3109
|
-
elif interpolation == 'midpoint':
|
|
3110
|
-
indices = floor(indices) + 0.5
|
|
3111
|
-
elif interpolation == 'nearest':
|
|
3112
|
-
indices = around(indices).astype(intp)
|
|
3113
|
-
elif interpolation == 'linear':
|
|
3114
|
-
pass # keep index as fraction and interpolate
|
|
3115
|
-
else:
|
|
3116
|
-
raise ValueError(
|
|
3117
|
-
"interpolation can only be 'linear', 'lower' 'higher', "
|
|
3118
|
-
"'midpoint', or 'nearest'")
|
|
3119
|
-
|
|
3120
|
-
if indices.dtype == intp: # take the points along axis
|
|
3121
|
-
ap.partition(indices, axis=axis)
|
|
3122
|
-
# ensure axis with qth is first
|
|
3123
|
-
ap = np.rollaxis(ap, axis, 0)
|
|
3124
|
-
axis = 0
|
|
3125
|
-
|
|
3126
|
-
if zerod:
|
|
3127
|
-
indices = indices[0]
|
|
3128
|
-
r = take(ap, indices, axis=axis, out=out)
|
|
3129
|
-
else: # weight the points above and below the indices
|
|
3130
|
-
indices_below = floor(indices).astype(intp)
|
|
3131
|
-
indices_above = indices_below + 1
|
|
3132
|
-
indices_above[indices_above > Nx - 1] = Nx - 1
|
|
3133
|
-
|
|
3134
|
-
weights_above = indices - indices_below
|
|
3135
|
-
weights_below = 1.0 - weights_above
|
|
3136
|
-
|
|
3137
|
-
weights_shape = [1, ] * ap.ndim
|
|
3138
|
-
weights_shape[axis] = len(indices)
|
|
3139
|
-
weights_below.shape = weights_shape
|
|
3140
|
-
weights_above.shape = weights_shape
|
|
3141
|
-
|
|
3142
|
-
ap.partition(concatenate((indices_below, indices_above)), axis=axis)
|
|
3143
|
-
x1 = take(ap, indices_below, axis=axis) * weights_below
|
|
3144
|
-
x2 = take(ap, indices_above, axis=axis) * weights_above
|
|
3145
|
-
|
|
3146
|
-
# ensure axis with qth is first
|
|
3147
|
-
x1 = np.rollaxis(x1, axis, 0)
|
|
3148
|
-
x2 = np.rollaxis(x2, axis, 0)
|
|
3149
|
-
|
|
3150
|
-
if zerod:
|
|
3151
|
-
x1 = x1.squeeze(0)
|
|
3152
|
-
x2 = x2.squeeze(0)
|
|
3153
|
-
|
|
3154
|
-
if out is not None:
|
|
3155
|
-
r = add(x1, x2, out=out)
|
|
3156
|
-
else:
|
|
3157
|
-
r = add(x1, x2)
|
|
3158
|
-
|
|
3159
|
-
return r
|
|
3160
|
-
|
|
3161
|
-
|
|
3162
|
-
def trapz(y, x=None, dx=1.0, axis=-1):
|
|
3163
|
-
"""
|
|
3164
|
-
Integrate along the given axis using the composite trapezoidal rule.
|
|
3165
|
-
|
|
3166
|
-
Integrate `y` (`x`) along given axis.
|
|
3167
|
-
|
|
3168
|
-
Parameters
|
|
3169
|
-
----------
|
|
3170
|
-
y : array_like
|
|
3171
|
-
Input array to integrate.
|
|
3172
|
-
x : array_like, optional
|
|
3173
|
-
If `x` is None, then spacing between all `y` elements is `dx`.
|
|
3174
|
-
dx : scalar, optional
|
|
3175
|
-
If `x` is None, spacing given by `dx` is assumed. Default is 1.
|
|
3176
|
-
axis : int, optional
|
|
3177
|
-
Specify the axis.
|
|
3178
|
-
|
|
3179
|
-
Returns
|
|
3180
|
-
-------
|
|
3181
|
-
trapz : float
|
|
3182
|
-
Definite integral as approximated by trapezoidal rule.
|
|
3183
|
-
|
|
3184
|
-
See Also
|
|
3185
|
-
--------
|
|
3186
|
-
sum, cumsum
|
|
3187
|
-
|
|
3188
|
-
Notes
|
|
3189
|
-
-----
|
|
3190
|
-
Image [2]_ illustrates trapezoidal rule -- y-axis locations of points
|
|
3191
|
-
will be taken from `y` array, by default x-axis distances between
|
|
3192
|
-
points will be 1.0, alternatively they can be provided with `x` array
|
|
3193
|
-
or with `dx` scalar. Return value will be equal to combined area under
|
|
3194
|
-
the red lines.
|
|
3195
|
-
|
|
3196
|
-
|
|
3197
|
-
References
|
|
3198
|
-
----------
|
|
3199
|
-
.. [1] Wikipedia page: http://en.wikipedia.org/wiki/Trapezoidal_rule
|
|
3200
|
-
|
|
3201
|
-
.. [2] Illustration image:
|
|
3202
|
-
http://en.wikipedia.org/wiki/File:Composite_trapezoidal_rule_illustration.png
|
|
3203
|
-
|
|
3204
|
-
Examples
|
|
3205
|
-
--------
|
|
3206
|
-
>>> np.trapz([1,2,3])
|
|
3207
|
-
4.0
|
|
3208
|
-
>>> np.trapz([1,2,3], x=[4,6,8])
|
|
3209
|
-
8.0
|
|
3210
|
-
>>> np.trapz([1,2,3], dx=2)
|
|
3211
|
-
8.0
|
|
3212
|
-
>>> a = np.arange(6).reshape(2, 3)
|
|
3213
|
-
>>> a
|
|
3214
|
-
array([[0, 1, 2],
|
|
3215
|
-
[3, 4, 5]])
|
|
3216
|
-
>>> np.trapz(a, axis=0)
|
|
3217
|
-
array([ 1.5, 2.5, 3.5])
|
|
3218
|
-
>>> np.trapz(a, axis=1)
|
|
3219
|
-
array([ 2., 8.])
|
|
3220
|
-
|
|
3221
|
-
"""
|
|
3222
|
-
y = asanyarray(y)
|
|
3223
|
-
if x is None:
|
|
3224
|
-
d = dx
|
|
3225
|
-
else:
|
|
3226
|
-
x = asanyarray(x)
|
|
3227
|
-
if x.ndim == 1:
|
|
3228
|
-
d = diff(x)
|
|
3229
|
-
# reshape to correct shape
|
|
3230
|
-
shape = [1]*y.ndim
|
|
3231
|
-
shape[axis] = d.shape[0]
|
|
3232
|
-
d = d.reshape(shape)
|
|
3233
|
-
else:
|
|
3234
|
-
d = diff(x, axis=axis)
|
|
3235
|
-
nd = len(y.shape)
|
|
3236
|
-
slice1 = [slice(None)]*nd
|
|
3237
|
-
slice2 = [slice(None)]*nd
|
|
3238
|
-
slice1[axis] = slice(1, None)
|
|
3239
|
-
slice2[axis] = slice(None, -1)
|
|
3240
|
-
try:
|
|
3241
|
-
ret = (d * (y[slice1] + y[slice2]) / 2.0).sum(axis)
|
|
3242
|
-
except ValueError:
|
|
3243
|
-
# Operations didn't work, cast to ndarray
|
|
3244
|
-
d = np.asarray(d)
|
|
3245
|
-
y = np.asarray(y)
|
|
3246
|
-
ret = add.reduce(d * (y[slice1]+y[slice2])/2.0, axis)
|
|
3247
|
-
return ret
|
|
3248
|
-
|
|
3249
|
-
|
|
3250
|
-
#always succeed
|
|
3251
|
-
def add_newdoc(place, obj, doc):
|
|
3252
|
-
"""Adds documentation to obj which is in module place.
|
|
3253
|
-
|
|
3254
|
-
If doc is a string add it to obj as a docstring
|
|
3255
|
-
|
|
3256
|
-
If doc is a tuple, then the first element is interpreted as
|
|
3257
|
-
an attribute of obj and the second as the docstring
|
|
3258
|
-
(method, docstring)
|
|
3259
|
-
|
|
3260
|
-
If doc is a list, then each element of the list should be a
|
|
3261
|
-
sequence of length two --> [(method1, docstring1),
|
|
3262
|
-
(method2, docstring2), ...]
|
|
3263
|
-
|
|
3264
|
-
This routine never raises an error.
|
|
3265
|
-
|
|
3266
|
-
This routine cannot modify read-only docstrings, as appear
|
|
3267
|
-
in new-style classes or built-in functions. Because this
|
|
3268
|
-
routine never raises an error the caller must check manually
|
|
3269
|
-
that the docstrings were changed.
|
|
3270
|
-
"""
|
|
3271
|
-
try:
|
|
3272
|
-
new = getattr(__import__(place, globals(), {}, [obj]), obj)
|
|
3273
|
-
if isinstance(doc, str):
|
|
3274
|
-
add_docstring(new, doc.strip())
|
|
3275
|
-
elif isinstance(doc, tuple):
|
|
3276
|
-
add_docstring(getattr(new, doc[0]), doc[1].strip())
|
|
3277
|
-
elif isinstance(doc, list):
|
|
3278
|
-
for val in doc:
|
|
3279
|
-
add_docstring(getattr(new, val[0]), val[1].strip())
|
|
3280
|
-
except:
|
|
3281
|
-
pass
|
|
3282
|
-
|
|
3283
|
-
|
|
3284
|
-
# Based on scitools meshgrid
|
|
3285
|
-
def meshgrid(*xi, **kwargs):
|
|
3286
|
-
"""
|
|
3287
|
-
Return coordinate matrices from coordinate vectors.
|
|
3288
|
-
|
|
3289
|
-
Make N-D coordinate arrays for vectorized evaluations of
|
|
3290
|
-
N-D scalar/vector fields over N-D grids, given
|
|
3291
|
-
one-dimensional coordinate arrays x1, x2,..., xn.
|
|
3292
|
-
|
|
3293
|
-
.. versionchanged:: 1.9
|
|
3294
|
-
1-D and 0-D cases are allowed.
|
|
3295
|
-
|
|
3296
|
-
Parameters
|
|
3297
|
-
----------
|
|
3298
|
-
x1, x2,..., xn : array_like
|
|
3299
|
-
1-D arrays representing the coordinates of a grid.
|
|
3300
|
-
indexing : {'xy', 'ij'}, optional
|
|
3301
|
-
Cartesian ('xy', default) or matrix ('ij') indexing of output.
|
|
3302
|
-
See Notes for more details.
|
|
3303
|
-
|
|
3304
|
-
.. versionadded:: 1.7.0
|
|
3305
|
-
sparse : bool, optional
|
|
3306
|
-
If True a sparse grid is returned in order to conserve memory.
|
|
3307
|
-
Default is False.
|
|
3308
|
-
|
|
3309
|
-
.. versionadded:: 1.7.0
|
|
3310
|
-
copy : bool, optional
|
|
3311
|
-
If False, a view into the original arrays are returned in order to
|
|
3312
|
-
conserve memory. Default is True. Please note that
|
|
3313
|
-
``sparse=False, copy=False`` will likely return non-contiguous
|
|
3314
|
-
arrays. Furthermore, more than one element of a broadcast array
|
|
3315
|
-
may refer to a single memory location. If you need to write to the
|
|
3316
|
-
arrays, make copies first.
|
|
3317
|
-
|
|
3318
|
-
.. versionadded:: 1.7.0
|
|
3319
|
-
|
|
3320
|
-
Returns
|
|
3321
|
-
-------
|
|
3322
|
-
X1, X2,..., XN : ndarray
|
|
3323
|
-
For vectors `x1`, `x2`,..., 'xn' with lengths ``Ni=len(xi)`` ,
|
|
3324
|
-
return ``(N1, N2, N3,...Nn)`` shaped arrays if indexing='ij'
|
|
3325
|
-
or ``(N2, N1, N3,...Nn)`` shaped arrays if indexing='xy'
|
|
3326
|
-
with the elements of `xi` repeated to fill the matrix along
|
|
3327
|
-
the first dimension for `x1`, the second for `x2` and so on.
|
|
3328
|
-
|
|
3329
|
-
Notes
|
|
3330
|
-
-----
|
|
3331
|
-
This function supports both indexing conventions through the indexing
|
|
3332
|
-
keyword argument. Giving the string 'ij' returns a meshgrid with
|
|
3333
|
-
matrix indexing, while 'xy' returns a meshgrid with Cartesian indexing.
|
|
3334
|
-
In the 2-D case with inputs of length M and N, the outputs are of shape
|
|
3335
|
-
(N, M) for 'xy' indexing and (M, N) for 'ij' indexing. In the 3-D case
|
|
3336
|
-
with inputs of length M, N and P, outputs are of shape (N, M, P) for
|
|
3337
|
-
'xy' indexing and (M, N, P) for 'ij' indexing. The difference is
|
|
3338
|
-
illustrated by the following code snippet::
|
|
3339
|
-
|
|
3340
|
-
xv, yv = meshgrid(x, y, sparse=False, indexing='ij')
|
|
3341
|
-
for i in range(nx):
|
|
3342
|
-
for j in range(ny):
|
|
3343
|
-
# treat xv[i,j], yv[i,j]
|
|
3344
|
-
|
|
3345
|
-
xv, yv = meshgrid(x, y, sparse=False, indexing='xy')
|
|
3346
|
-
for i in range(nx):
|
|
3347
|
-
for j in range(ny):
|
|
3348
|
-
# treat xv[j,i], yv[j,i]
|
|
3349
|
-
|
|
3350
|
-
In the 1-D and 0-D case, the indexing and sparse keywords have no effect.
|
|
3351
|
-
|
|
3352
|
-
See Also
|
|
3353
|
-
--------
|
|
3354
|
-
index_tricks.mgrid : Construct a multi-dimensional "meshgrid"
|
|
3355
|
-
using indexing notation.
|
|
3356
|
-
index_tricks.ogrid : Construct an open multi-dimensional "meshgrid"
|
|
3357
|
-
using indexing notation.
|
|
3358
|
-
|
|
3359
|
-
Examples
|
|
3360
|
-
--------
|
|
3361
|
-
>>> nx, ny = (3, 2)
|
|
3362
|
-
>>> x = np.linspace(0, 1, nx)
|
|
3363
|
-
>>> y = np.linspace(0, 1, ny)
|
|
3364
|
-
>>> xv, yv = meshgrid(x, y)
|
|
3365
|
-
>>> xv
|
|
3366
|
-
array([[ 0. , 0.5, 1. ],
|
|
3367
|
-
[ 0. , 0.5, 1. ]])
|
|
3368
|
-
>>> yv
|
|
3369
|
-
array([[ 0., 0., 0.],
|
|
3370
|
-
[ 1., 1., 1.]])
|
|
3371
|
-
>>> xv, yv = meshgrid(x, y, sparse=True) # make sparse output arrays
|
|
3372
|
-
>>> xv
|
|
3373
|
-
array([[ 0. , 0.5, 1. ]])
|
|
3374
|
-
>>> yv
|
|
3375
|
-
array([[ 0.],
|
|
3376
|
-
[ 1.]])
|
|
3377
|
-
|
|
3378
|
-
`meshgrid` is very useful to evaluate functions on a grid.
|
|
3379
|
-
|
|
3380
|
-
>>> x = np.arange(-5, 5, 0.1)
|
|
3381
|
-
>>> y = np.arange(-5, 5, 0.1)
|
|
3382
|
-
>>> xx, yy = meshgrid(x, y, sparse=True)
|
|
3383
|
-
>>> z = np.sin(xx**2 + yy**2) / (xx**2 + yy**2)
|
|
3384
|
-
>>> h = plt.contourf(x,y,z)
|
|
3385
|
-
|
|
3386
|
-
"""
|
|
3387
|
-
ndim = len(xi)
|
|
3388
|
-
|
|
3389
|
-
copy_ = kwargs.pop('copy', True)
|
|
3390
|
-
sparse = kwargs.pop('sparse', False)
|
|
3391
|
-
indexing = kwargs.pop('indexing', 'xy')
|
|
3392
|
-
|
|
3393
|
-
if kwargs:
|
|
3394
|
-
raise TypeError("meshgrid() got an unexpected keyword argument '%s'"
|
|
3395
|
-
% (list(kwargs)[0],))
|
|
3396
|
-
|
|
3397
|
-
if indexing not in ['xy', 'ij']:
|
|
3398
|
-
raise ValueError(
|
|
3399
|
-
"Valid values for `indexing` are 'xy' and 'ij'.")
|
|
3400
|
-
|
|
3401
|
-
s0 = (1,) * ndim
|
|
3402
|
-
output = [np.asanyarray(x).reshape(s0[:i] + (-1,) + s0[i + 1::])
|
|
3403
|
-
for i, x in enumerate(xi)]
|
|
3404
|
-
|
|
3405
|
-
shape = [x.size for x in output]
|
|
3406
|
-
|
|
3407
|
-
if indexing == 'xy' and ndim > 1:
|
|
3408
|
-
# switch first and second axis
|
|
3409
|
-
output[0].shape = (1, -1) + (1,)*(ndim - 2)
|
|
3410
|
-
output[1].shape = (-1, 1) + (1,)*(ndim - 2)
|
|
3411
|
-
shape[0], shape[1] = shape[1], shape[0]
|
|
3412
|
-
|
|
3413
|
-
if sparse:
|
|
3414
|
-
if copy_:
|
|
3415
|
-
return [x.copy() for x in output]
|
|
3416
|
-
else:
|
|
3417
|
-
return output
|
|
3418
|
-
else:
|
|
3419
|
-
# Return the full N-D matrix (not only the 1-D vector)
|
|
3420
|
-
if copy_:
|
|
3421
|
-
mult_fact = np.ones(shape, dtype=int)
|
|
3422
|
-
return [x * mult_fact for x in output]
|
|
3423
|
-
else:
|
|
3424
|
-
return np.broadcast_arrays(*output)
|
|
3425
|
-
|
|
3426
|
-
|
|
3427
|
-
def delete(arr, obj, axis=None):
|
|
3428
|
-
"""
|
|
3429
|
-
Return a new array with sub-arrays along an axis deleted. For a one
|
|
3430
|
-
dimensional array, this returns those entries not returned by
|
|
3431
|
-
`arr[obj]`.
|
|
3432
|
-
|
|
3433
|
-
Parameters
|
|
3434
|
-
----------
|
|
3435
|
-
arr : array_like
|
|
3436
|
-
Input array.
|
|
3437
|
-
obj : slice, int or array of ints
|
|
3438
|
-
Indicate which sub-arrays to remove.
|
|
3439
|
-
axis : int, optional
|
|
3440
|
-
The axis along which to delete the subarray defined by `obj`.
|
|
3441
|
-
If `axis` is None, `obj` is applied to the flattened array.
|
|
3442
|
-
|
|
3443
|
-
Returns
|
|
3444
|
-
-------
|
|
3445
|
-
out : ndarray
|
|
3446
|
-
A copy of `arr` with the elements specified by `obj` removed. Note
|
|
3447
|
-
that `delete` does not occur in-place. If `axis` is None, `out` is
|
|
3448
|
-
a flattened array.
|
|
3449
|
-
|
|
3450
|
-
See Also
|
|
3451
|
-
--------
|
|
3452
|
-
insert : Insert elements into an array.
|
|
3453
|
-
append : Append elements at the end of an array.
|
|
3454
|
-
|
|
3455
|
-
Notes
|
|
3456
|
-
-----
|
|
3457
|
-
Often it is preferable to use a boolean mask. For example:
|
|
3458
|
-
|
|
3459
|
-
>>> mask = np.ones(len(arr), dtype=bool)
|
|
3460
|
-
>>> mask[[0,2,4]] = False
|
|
3461
|
-
>>> result = arr[mask,...]
|
|
3462
|
-
|
|
3463
|
-
Is equivalent to `np.delete(arr, [0,2,4], axis=0)`, but allows further
|
|
3464
|
-
use of `mask`.
|
|
3465
|
-
|
|
3466
|
-
Examples
|
|
3467
|
-
--------
|
|
3468
|
-
>>> arr = np.array([[1,2,3,4], [5,6,7,8], [9,10,11,12]])
|
|
3469
|
-
>>> arr
|
|
3470
|
-
array([[ 1, 2, 3, 4],
|
|
3471
|
-
[ 5, 6, 7, 8],
|
|
3472
|
-
[ 9, 10, 11, 12]])
|
|
3473
|
-
>>> np.delete(arr, 1, 0)
|
|
3474
|
-
array([[ 1, 2, 3, 4],
|
|
3475
|
-
[ 9, 10, 11, 12]])
|
|
3476
|
-
|
|
3477
|
-
>>> np.delete(arr, np.s_[::2], 1)
|
|
3478
|
-
array([[ 2, 4],
|
|
3479
|
-
[ 6, 8],
|
|
3480
|
-
[10, 12]])
|
|
3481
|
-
>>> np.delete(arr, [1,3,5], None)
|
|
3482
|
-
array([ 1, 3, 5, 7, 8, 9, 10, 11, 12])
|
|
3483
|
-
|
|
3484
|
-
"""
|
|
3485
|
-
wrap = None
|
|
3486
|
-
if type(arr) is not ndarray:
|
|
3487
|
-
try:
|
|
3488
|
-
wrap = arr.__array_wrap__
|
|
3489
|
-
except AttributeError:
|
|
3490
|
-
pass
|
|
3491
|
-
|
|
3492
|
-
arr = asarray(arr)
|
|
3493
|
-
ndim = arr.ndim
|
|
3494
|
-
if axis is None:
|
|
3495
|
-
if ndim != 1:
|
|
3496
|
-
arr = arr.ravel()
|
|
3497
|
-
ndim = arr.ndim
|
|
3498
|
-
axis = ndim - 1
|
|
3499
|
-
if ndim == 0:
|
|
3500
|
-
warnings.warn(
|
|
3501
|
-
"in the future the special handling of scalars will be removed "
|
|
3502
|
-
"from delete and raise an error", DeprecationWarning)
|
|
3503
|
-
if wrap:
|
|
3504
|
-
return wrap(arr)
|
|
3505
|
-
else:
|
|
3506
|
-
return arr.copy()
|
|
3507
|
-
|
|
3508
|
-
slobj = [slice(None)]*ndim
|
|
3509
|
-
N = arr.shape[axis]
|
|
3510
|
-
newshape = list(arr.shape)
|
|
3511
|
-
|
|
3512
|
-
if isinstance(obj, slice):
|
|
3513
|
-
start, stop, step = obj.indices(N)
|
|
3514
|
-
xr = range(start, stop, step)
|
|
3515
|
-
numtodel = len(xr)
|
|
3516
|
-
|
|
3517
|
-
if numtodel <= 0:
|
|
3518
|
-
if wrap:
|
|
3519
|
-
return wrap(arr.copy())
|
|
3520
|
-
else:
|
|
3521
|
-
return arr.copy()
|
|
3522
|
-
|
|
3523
|
-
# Invert if step is negative:
|
|
3524
|
-
if step < 0:
|
|
3525
|
-
step = -step
|
|
3526
|
-
start = xr[-1]
|
|
3527
|
-
stop = xr[0] + 1
|
|
3528
|
-
|
|
3529
|
-
newshape[axis] -= numtodel
|
|
3530
|
-
new = empty(newshape, arr.dtype, arr.flags.fnc)
|
|
3531
|
-
# copy initial chunk
|
|
3532
|
-
if start == 0:
|
|
3533
|
-
pass
|
|
3534
|
-
else:
|
|
3535
|
-
slobj[axis] = slice(None, start)
|
|
3536
|
-
new[slobj] = arr[slobj]
|
|
3537
|
-
# copy end chunck
|
|
3538
|
-
if stop == N:
|
|
3539
|
-
pass
|
|
3540
|
-
else:
|
|
3541
|
-
slobj[axis] = slice(stop-numtodel, None)
|
|
3542
|
-
slobj2 = [slice(None)]*ndim
|
|
3543
|
-
slobj2[axis] = slice(stop, None)
|
|
3544
|
-
new[slobj] = arr[slobj2]
|
|
3545
|
-
# copy middle pieces
|
|
3546
|
-
if step == 1:
|
|
3547
|
-
pass
|
|
3548
|
-
else: # use array indexing.
|
|
3549
|
-
keep = ones(stop-start, dtype=bool)
|
|
3550
|
-
keep[:stop-start:step] = False
|
|
3551
|
-
slobj[axis] = slice(start, stop-numtodel)
|
|
3552
|
-
slobj2 = [slice(None)]*ndim
|
|
3553
|
-
slobj2[axis] = slice(start, stop)
|
|
3554
|
-
arr = arr[slobj2]
|
|
3555
|
-
slobj2[axis] = keep
|
|
3556
|
-
new[slobj] = arr[slobj2]
|
|
3557
|
-
if wrap:
|
|
3558
|
-
return wrap(new)
|
|
3559
|
-
else:
|
|
3560
|
-
return new
|
|
3561
|
-
|
|
3562
|
-
_obj = obj
|
|
3563
|
-
obj = np.asarray(obj)
|
|
3564
|
-
# After removing the special handling of booleans and out of
|
|
3565
|
-
# bounds values, the conversion to the array can be removed.
|
|
3566
|
-
if obj.dtype == bool:
|
|
3567
|
-
warnings.warn(
|
|
3568
|
-
"in the future insert will treat boolean arrays and array-likes "
|
|
3569
|
-
"as boolean index instead of casting it to integer", FutureWarning)
|
|
3570
|
-
obj = obj.astype(intp)
|
|
3571
|
-
if isinstance(_obj, (int, long, integer)):
|
|
3572
|
-
# optimization for a single value
|
|
3573
|
-
obj = obj.item()
|
|
3574
|
-
if (obj < -N or obj >= N):
|
|
3575
|
-
raise IndexError(
|
|
3576
|
-
"index %i is out of bounds for axis %i with "
|
|
3577
|
-
"size %i" % (obj, axis, N))
|
|
3578
|
-
if (obj < 0):
|
|
3579
|
-
obj += N
|
|
3580
|
-
newshape[axis] -= 1
|
|
3581
|
-
new = empty(newshape, arr.dtype, arr.flags.fnc)
|
|
3582
|
-
slobj[axis] = slice(None, obj)
|
|
3583
|
-
new[slobj] = arr[slobj]
|
|
3584
|
-
slobj[axis] = slice(obj, None)
|
|
3585
|
-
slobj2 = [slice(None)]*ndim
|
|
3586
|
-
slobj2[axis] = slice(obj+1, None)
|
|
3587
|
-
new[slobj] = arr[slobj2]
|
|
3588
|
-
else:
|
|
3589
|
-
if obj.size == 0 and not isinstance(_obj, np.ndarray):
|
|
3590
|
-
obj = obj.astype(intp)
|
|
3591
|
-
if not np.can_cast(obj, intp, 'same_kind'):
|
|
3592
|
-
# obj.size = 1 special case always failed and would just
|
|
3593
|
-
# give superfluous warnings.
|
|
3594
|
-
warnings.warn(
|
|
3595
|
-
"using a non-integer array as obj in delete will result in an "
|
|
3596
|
-
"error in the future", DeprecationWarning)
|
|
3597
|
-
obj = obj.astype(intp)
|
|
3598
|
-
keep = ones(N, dtype=bool)
|
|
3599
|
-
|
|
3600
|
-
# Test if there are out of bound indices, this is deprecated
|
|
3601
|
-
inside_bounds = (obj < N) & (obj >= -N)
|
|
3602
|
-
if not inside_bounds.all():
|
|
3603
|
-
warnings.warn(
|
|
3604
|
-
"in the future out of bounds indices will raise an error "
|
|
3605
|
-
"instead of being ignored by `numpy.delete`.",
|
|
3606
|
-
DeprecationWarning)
|
|
3607
|
-
obj = obj[inside_bounds]
|
|
3608
|
-
positive_indices = obj >= 0
|
|
3609
|
-
if not positive_indices.all():
|
|
3610
|
-
warnings.warn(
|
|
3611
|
-
"in the future negative indices will not be ignored by "
|
|
3612
|
-
"`numpy.delete`.", FutureWarning)
|
|
3613
|
-
obj = obj[positive_indices]
|
|
3614
|
-
|
|
3615
|
-
keep[obj, ] = False
|
|
3616
|
-
slobj[axis] = keep
|
|
3617
|
-
new = arr[slobj]
|
|
3618
|
-
|
|
3619
|
-
if wrap:
|
|
3620
|
-
return wrap(new)
|
|
3621
|
-
else:
|
|
3622
|
-
return new
|
|
3623
|
-
|
|
3624
|
-
|
|
3625
|
-
def insert(arr, obj, values, axis=None):
|
|
3626
|
-
"""
|
|
3627
|
-
Insert values along the given axis before the given indices.
|
|
3628
|
-
|
|
3629
|
-
Parameters
|
|
3630
|
-
----------
|
|
3631
|
-
arr : array_like
|
|
3632
|
-
Input array.
|
|
3633
|
-
obj : int, slice or sequence of ints
|
|
3634
|
-
Object that defines the index or indices before which `values` is
|
|
3635
|
-
inserted.
|
|
3636
|
-
|
|
3637
|
-
.. versionadded:: 1.8.0
|
|
3638
|
-
|
|
3639
|
-
Support for multiple insertions when `obj` is a single scalar or a
|
|
3640
|
-
sequence with one element (similar to calling insert multiple
|
|
3641
|
-
times).
|
|
3642
|
-
values : array_like
|
|
3643
|
-
Values to insert into `arr`. If the type of `values` is different
|
|
3644
|
-
from that of `arr`, `values` is converted to the type of `arr`.
|
|
3645
|
-
`values` should be shaped so that ``arr[...,obj,...] = values``
|
|
3646
|
-
is legal.
|
|
3647
|
-
axis : int, optional
|
|
3648
|
-
Axis along which to insert `values`. If `axis` is None then `arr`
|
|
3649
|
-
is flattened first.
|
|
3650
|
-
|
|
3651
|
-
Returns
|
|
3652
|
-
-------
|
|
3653
|
-
out : ndarray
|
|
3654
|
-
A copy of `arr` with `values` inserted. Note that `insert`
|
|
3655
|
-
does not occur in-place: a new array is returned. If
|
|
3656
|
-
`axis` is None, `out` is a flattened array.
|
|
3657
|
-
|
|
3658
|
-
See Also
|
|
3659
|
-
--------
|
|
3660
|
-
append : Append elements at the end of an array.
|
|
3661
|
-
concatenate : Join a sequence of arrays together.
|
|
3662
|
-
delete : Delete elements from an array.
|
|
3663
|
-
|
|
3664
|
-
Notes
|
|
3665
|
-
-----
|
|
3666
|
-
Note that for higher dimensional inserts `obj=0` behaves very different
|
|
3667
|
-
from `obj=[0]` just like `arr[:,0,:] = values` is different from
|
|
3668
|
-
`arr[:,[0],:] = values`.
|
|
3669
|
-
|
|
3670
|
-
Examples
|
|
3671
|
-
--------
|
|
3672
|
-
>>> a = np.array([[1, 1], [2, 2], [3, 3]])
|
|
3673
|
-
>>> a
|
|
3674
|
-
array([[1, 1],
|
|
3675
|
-
[2, 2],
|
|
3676
|
-
[3, 3]])
|
|
3677
|
-
>>> np.insert(a, 1, 5)
|
|
3678
|
-
array([1, 5, 1, 2, 2, 3, 3])
|
|
3679
|
-
>>> np.insert(a, 1, 5, axis=1)
|
|
3680
|
-
array([[1, 5, 1],
|
|
3681
|
-
[2, 5, 2],
|
|
3682
|
-
[3, 5, 3]])
|
|
3683
|
-
|
|
3684
|
-
Difference between sequence and scalars:
|
|
3685
|
-
>>> np.insert(a, [1], [[1],[2],[3]], axis=1)
|
|
3686
|
-
array([[1, 1, 1],
|
|
3687
|
-
[2, 2, 2],
|
|
3688
|
-
[3, 3, 3]])
|
|
3689
|
-
>>> np.array_equal(np.insert(a, 1, [1, 2, 3], axis=1),
|
|
3690
|
-
... np.insert(a, [1], [[1],[2],[3]], axis=1))
|
|
3691
|
-
True
|
|
3692
|
-
|
|
3693
|
-
>>> b = a.flatten()
|
|
3694
|
-
>>> b
|
|
3695
|
-
array([1, 1, 2, 2, 3, 3])
|
|
3696
|
-
>>> np.insert(b, [2, 2], [5, 6])
|
|
3697
|
-
array([1, 1, 5, 6, 2, 2, 3, 3])
|
|
3698
|
-
|
|
3699
|
-
>>> np.insert(b, slice(2, 4), [5, 6])
|
|
3700
|
-
array([1, 1, 5, 2, 6, 2, 3, 3])
|
|
3701
|
-
|
|
3702
|
-
>>> np.insert(b, [2, 2], [7.13, False]) # type casting
|
|
3703
|
-
array([1, 1, 7, 0, 2, 2, 3, 3])
|
|
3704
|
-
|
|
3705
|
-
>>> x = np.arange(8).reshape(2, 4)
|
|
3706
|
-
>>> idx = (1, 3)
|
|
3707
|
-
>>> np.insert(x, idx, 999, axis=1)
|
|
3708
|
-
array([[ 0, 999, 1, 2, 999, 3],
|
|
3709
|
-
[ 4, 999, 5, 6, 999, 7]])
|
|
3710
|
-
|
|
3711
|
-
"""
|
|
3712
|
-
wrap = None
|
|
3713
|
-
if type(arr) is not ndarray:
|
|
3714
|
-
try:
|
|
3715
|
-
wrap = arr.__array_wrap__
|
|
3716
|
-
except AttributeError:
|
|
3717
|
-
pass
|
|
3718
|
-
|
|
3719
|
-
arr = asarray(arr)
|
|
3720
|
-
ndim = arr.ndim
|
|
3721
|
-
if axis is None:
|
|
3722
|
-
if ndim != 1:
|
|
3723
|
-
arr = arr.ravel()
|
|
3724
|
-
ndim = arr.ndim
|
|
3725
|
-
axis = ndim - 1
|
|
3726
|
-
else:
|
|
3727
|
-
if ndim > 0 and (axis < -ndim or axis >= ndim):
|
|
3728
|
-
raise IndexError(
|
|
3729
|
-
"axis %i is out of bounds for an array of "
|
|
3730
|
-
"dimension %i" % (axis, ndim))
|
|
3731
|
-
if (axis < 0):
|
|
3732
|
-
axis += ndim
|
|
3733
|
-
if (ndim == 0):
|
|
3734
|
-
warnings.warn(
|
|
3735
|
-
"in the future the special handling of scalars will be removed "
|
|
3736
|
-
"from insert and raise an error", DeprecationWarning)
|
|
3737
|
-
arr = arr.copy()
|
|
3738
|
-
arr[...] = values
|
|
3739
|
-
if wrap:
|
|
3740
|
-
return wrap(arr)
|
|
3741
|
-
else:
|
|
3742
|
-
return arr
|
|
3743
|
-
slobj = [slice(None)]*ndim
|
|
3744
|
-
N = arr.shape[axis]
|
|
3745
|
-
newshape = list(arr.shape)
|
|
3746
|
-
|
|
3747
|
-
if isinstance(obj, slice):
|
|
3748
|
-
# turn it into a range object
|
|
3749
|
-
indices = arange(*obj.indices(N), **{'dtype': intp})
|
|
3750
|
-
else:
|
|
3751
|
-
# need to copy obj, because indices will be changed in-place
|
|
3752
|
-
indices = np.array(obj)
|
|
3753
|
-
if indices.dtype == bool:
|
|
3754
|
-
# See also delete
|
|
3755
|
-
warnings.warn(
|
|
3756
|
-
"in the future insert will treat boolean arrays and "
|
|
3757
|
-
"array-likes as a boolean index instead of casting it to "
|
|
3758
|
-
"integer", FutureWarning)
|
|
3759
|
-
indices = indices.astype(intp)
|
|
3760
|
-
# Code after warning period:
|
|
3761
|
-
#if obj.ndim != 1:
|
|
3762
|
-
# raise ValueError('boolean array argument obj to insert '
|
|
3763
|
-
# 'must be one dimensional')
|
|
3764
|
-
#indices = np.flatnonzero(obj)
|
|
3765
|
-
elif indices.ndim > 1:
|
|
3766
|
-
raise ValueError(
|
|
3767
|
-
"index array argument obj to insert must be one dimensional "
|
|
3768
|
-
"or scalar")
|
|
3769
|
-
if indices.size == 1:
|
|
3770
|
-
index = indices.item()
|
|
3771
|
-
if index < -N or index > N:
|
|
3772
|
-
raise IndexError(
|
|
3773
|
-
"index %i is out of bounds for axis %i with "
|
|
3774
|
-
"size %i" % (obj, axis, N))
|
|
3775
|
-
if (index < 0):
|
|
3776
|
-
index += N
|
|
3777
|
-
|
|
3778
|
-
# There are some object array corner cases here, but we cannot avoid
|
|
3779
|
-
# that:
|
|
3780
|
-
values = array(values, copy=False, ndmin=arr.ndim, dtype=arr.dtype)
|
|
3781
|
-
if indices.ndim == 0:
|
|
3782
|
-
# broadcasting is very different here, since a[:,0,:] = ... behaves
|
|
3783
|
-
# very different from a[:,[0],:] = ...! This changes values so that
|
|
3784
|
-
# it works likes the second case. (here a[:,0:1,:])
|
|
3785
|
-
values = np.rollaxis(values, 0, (axis % values.ndim) + 1)
|
|
3786
|
-
numnew = values.shape[axis]
|
|
3787
|
-
newshape[axis] += numnew
|
|
3788
|
-
new = empty(newshape, arr.dtype, arr.flags.fnc)
|
|
3789
|
-
slobj[axis] = slice(None, index)
|
|
3790
|
-
new[slobj] = arr[slobj]
|
|
3791
|
-
slobj[axis] = slice(index, index+numnew)
|
|
3792
|
-
new[slobj] = values
|
|
3793
|
-
slobj[axis] = slice(index+numnew, None)
|
|
3794
|
-
slobj2 = [slice(None)] * ndim
|
|
3795
|
-
slobj2[axis] = slice(index, None)
|
|
3796
|
-
new[slobj] = arr[slobj2]
|
|
3797
|
-
if wrap:
|
|
3798
|
-
return wrap(new)
|
|
3799
|
-
return new
|
|
3800
|
-
elif indices.size == 0 and not isinstance(obj, np.ndarray):
|
|
3801
|
-
# Can safely cast the empty list to intp
|
|
3802
|
-
indices = indices.astype(intp)
|
|
3803
|
-
|
|
3804
|
-
if not np.can_cast(indices, intp, 'same_kind'):
|
|
3805
|
-
warnings.warn(
|
|
3806
|
-
"using a non-integer array as obj in insert will result in an "
|
|
3807
|
-
"error in the future", DeprecationWarning)
|
|
3808
|
-
indices = indices.astype(intp)
|
|
3809
|
-
|
|
3810
|
-
indices[indices < 0] += N
|
|
3811
|
-
|
|
3812
|
-
numnew = len(indices)
|
|
3813
|
-
order = indices.argsort(kind='mergesort') # stable sort
|
|
3814
|
-
indices[order] += np.arange(numnew)
|
|
3815
|
-
|
|
3816
|
-
newshape[axis] += numnew
|
|
3817
|
-
old_mask = ones(newshape[axis], dtype=bool)
|
|
3818
|
-
old_mask[indices] = False
|
|
3819
|
-
|
|
3820
|
-
new = empty(newshape, arr.dtype, arr.flags.fnc)
|
|
3821
|
-
slobj2 = [slice(None)]*ndim
|
|
3822
|
-
slobj[axis] = indices
|
|
3823
|
-
slobj2[axis] = old_mask
|
|
3824
|
-
new[slobj] = values
|
|
3825
|
-
new[slobj2] = arr
|
|
3826
|
-
|
|
3827
|
-
if wrap:
|
|
3828
|
-
return wrap(new)
|
|
3829
|
-
return new
|
|
3830
|
-
|
|
3831
|
-
|
|
3832
|
-
def append(arr, values, axis=None):
|
|
3833
|
-
"""
|
|
3834
|
-
Append values to the end of an array.
|
|
3835
|
-
|
|
3836
|
-
Parameters
|
|
3837
|
-
----------
|
|
3838
|
-
arr : array_like
|
|
3839
|
-
Values are appended to a copy of this array.
|
|
3840
|
-
values : array_like
|
|
3841
|
-
These values are appended to a copy of `arr`. It must be of the
|
|
3842
|
-
correct shape (the same shape as `arr`, excluding `axis`). If
|
|
3843
|
-
`axis` is not specified, `values` can be any shape and will be
|
|
3844
|
-
flattened before use.
|
|
3845
|
-
axis : int, optional
|
|
3846
|
-
The axis along which `values` are appended. If `axis` is not
|
|
3847
|
-
given, both `arr` and `values` are flattened before use.
|
|
3848
|
-
|
|
3849
|
-
Returns
|
|
3850
|
-
-------
|
|
3851
|
-
append : ndarray
|
|
3852
|
-
A copy of `arr` with `values` appended to `axis`. Note that
|
|
3853
|
-
`append` does not occur in-place: a new array is allocated and
|
|
3854
|
-
filled. If `axis` is None, `out` is a flattened array.
|
|
3855
|
-
|
|
3856
|
-
See Also
|
|
3857
|
-
--------
|
|
3858
|
-
insert : Insert elements into an array.
|
|
3859
|
-
delete : Delete elements from an array.
|
|
3860
|
-
|
|
3861
|
-
Examples
|
|
3862
|
-
--------
|
|
3863
|
-
>>> np.append([1, 2, 3], [[4, 5, 6], [7, 8, 9]])
|
|
3864
|
-
array([1, 2, 3, 4, 5, 6, 7, 8, 9])
|
|
3865
|
-
|
|
3866
|
-
When `axis` is specified, `values` must have the correct shape.
|
|
3867
|
-
|
|
3868
|
-
>>> np.append([[1, 2, 3], [4, 5, 6]], [[7, 8, 9]], axis=0)
|
|
3869
|
-
array([[1, 2, 3],
|
|
3870
|
-
[4, 5, 6],
|
|
3871
|
-
[7, 8, 9]])
|
|
3872
|
-
>>> np.append([[1, 2, 3], [4, 5, 6]], [7, 8, 9], axis=0)
|
|
3873
|
-
Traceback (most recent call last):
|
|
3874
|
-
...
|
|
3875
|
-
ValueError: arrays must have same number of dimensions
|
|
3876
|
-
|
|
3877
|
-
"""
|
|
3878
|
-
arr = asanyarray(arr)
|
|
3879
|
-
if axis is None:
|
|
3880
|
-
if arr.ndim != 1:
|
|
3881
|
-
arr = arr.ravel()
|
|
3882
|
-
values = ravel(values)
|
|
3883
|
-
axis = arr.ndim-1
|
|
3884
|
-
return concatenate((arr, values), axis=axis)
|