numpy 1.9.3__zip → 1.10.0__zip

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  1. numpy-1.10.0.post2/INSTALL.txt +200 -0
  2. numpy-1.10.0.post2/LICENSE.txt +30 -0
  3. numpy-1.10.0.post2/MANIFEST.in +31 -0
  4. numpy-1.10.0.post2/PKG-INFO +47 -0
  5. numpy-1.10.0.post2/cnew.txt +117 -0
  6. numpy-1.10.0.post2/cold.txt +44 -0
  7. numpy-1.10.0.post2/committers.txt +160 -0
  8. numpy-1.10.0.post2/cpre.txt +283 -0
  9. numpy-1.10.0.post2/crel.txt +161 -0
  10. numpy-1.10.0.post2/doc/release/1.10.0-notes.rst +439 -0
  11. numpy-1.10.0.post2/doc/source/conf.py +331 -0
  12. numpy-1.10.0.post2/doc/source/dev/development_environment.rst +211 -0
  13. numpy-1.10.0.post2/doc/source/dev/gitwash/development_workflow.rst +534 -0
  14. numpy-1.10.0.post2/doc/source/dev/gitwash/git_links.inc +95 -0
  15. numpy-1.10.0.post2/doc/source/dev/gitwash/index.rst +14 -0
  16. numpy-1.10.0.post2/doc/source/dev/index.rst +11 -0
  17. numpy-1.10.0.post2/doc/source/reference/arrays.classes.rst +490 -0
  18. numpy-1.10.0.post2/doc/source/reference/arrays.dtypes.rst +536 -0
  19. numpy-1.10.0.post2/doc/source/reference/arrays.indexing.rst +549 -0
  20. numpy-1.10.0.post2/doc/source/reference/arrays.interface.rst +337 -0
  21. numpy-1.10.0.post2/doc/source/reference/arrays.ndarray.rst +622 -0
  22. numpy-1.10.0.post2/doc/source/reference/arrays.scalars.rst +291 -0
  23. numpy-1.10.0.post2/doc/source/reference/c-api.array.rst +3393 -0
  24. numpy-1.10.0.post2/doc/source/reference/c-api.config.rst +103 -0
  25. numpy-1.10.0.post2/doc/source/reference/c-api.coremath.rst +420 -0
  26. numpy-1.10.0.post2/doc/source/reference/c-api.dtype.rst +376 -0
  27. numpy-1.10.0.post2/doc/source/reference/c-api.generalized-ufuncs.rst +191 -0
  28. numpy-1.10.0.post2/doc/source/reference/c-api.iterator.rst +1300 -0
  29. numpy-1.10.0.post2/doc/source/reference/c-api.types-and-structures.rst +1240 -0
  30. numpy-1.10.0.post2/doc/source/reference/c-api.ufunc.rst +413 -0
  31. numpy-1.10.0.post2/doc/source/reference/index.rst +43 -0
  32. numpy-1.10.0.post2/doc/source/reference/internals.code-explanations.rst +615 -0
  33. numpy-1.10.0.post2/doc/source/reference/routines.array-manipulation.rst +115 -0
  34. numpy-1.10.0.post2/doc/source/reference/routines.io.rst +78 -0
  35. numpy-1.10.0.post2/doc/source/reference/routines.linalg.rst +91 -0
  36. numpy-1.10.0.post2/doc/source/reference/routines.ma.rst +407 -0
  37. numpy-1.10.0.post2/doc/source/reference/routines.sort.rst +41 -0
  38. numpy-1.10.0.post2/doc/source/reference/routines.statistics.rst +57 -0
  39. numpy-1.10.0.post2/doc/source/reference/swig.interface-file.rst +1066 -0
  40. numpy-1.10.0.post2/doc/source/reference/swig.testing.rst +167 -0
  41. numpy-1.10.0.post2/doc/source/reference/ufuncs.rst +666 -0
  42. numpy-1.10.0.post2/doc/source/release.rst +20 -0
  43. numpy-1.10.0.post2/doc/source/user/basics.io.genfromtxt.rst +531 -0
  44. numpy-1.10.0.post2/doc/source/user/basics.rec.rst +7 -0
  45. numpy-1.10.0.post2/doc/source/user/c-info.beyond-basics.rst +560 -0
  46. numpy-1.10.0.post2/doc/source/user/c-info.how-to-extend.rst +642 -0
  47. numpy-1.10.0.post2/doc/source/user/c-info.python-as-glue.rst +1177 -0
  48. numpy-1.10.0.post2/doc/source/user/c-info.ufunc-tutorial.rst +1211 -0
  49. numpy-1.10.0.post2/doc/source/user/install.rst +194 -0
  50. numpy-1.10.0.post2/numpy/__init__.py +227 -0
  51. numpy-1.10.0.post2/numpy/_build_utils/README +8 -0
  52. numpy-1.10.0.post2/numpy/_build_utils/apple_accelerate.py +21 -0
  53. numpy-1.10.0.post2/numpy/_build_utils/common.py +138 -0
  54. numpy-1.10.0.post2/numpy/_build_utils/src/apple_sgemv_fix.c +227 -0
  55. numpy-1.10.0.post2/numpy/_build_utils/waf.py +531 -0
  56. numpy-1.10.0.post2/numpy/_import_tools.py +353 -0
  57. numpy-1.10.0.post2/numpy/add_newdocs.py +7611 -0
  58. numpy-1.10.0.post2/numpy/compat/_inspect.py +194 -0
  59. numpy-1.10.0.post2/numpy/compat/py3k.py +88 -0
  60. numpy-1.10.0.post2/numpy/compat/setup.py +12 -0
  61. numpy-1.10.0.post2/numpy/core/__init__.py +89 -0
  62. numpy-1.10.0.post2/numpy/core/_internal.py +761 -0
  63. numpy-1.10.0.post2/numpy/core/_methods.py +133 -0
  64. numpy-1.10.0.post2/numpy/core/arrayprint.py +760 -0
  65. numpy-1.10.0.post2/numpy/core/code_generators/cversions.txt +34 -0
  66. numpy-1.10.0.post2/numpy/core/code_generators/generate_ufunc_api.py +219 -0
  67. numpy-1.10.0.post2/numpy/core/code_generators/generate_umath.py +1017 -0
  68. numpy-1.10.0.post2/numpy/core/code_generators/numpy_api.py +415 -0
  69. numpy-1.10.0.post2/numpy/core/code_generators/ufunc_docstrings.py +3442 -0
  70. numpy-1.10.0.post2/numpy/core/defchararray.py +2689 -0
  71. numpy-1.10.0.post2/numpy/core/fromnumeric.py +3089 -0
  72. numpy-1.10.0.post2/numpy/core/function_base.py +203 -0
  73. numpy-1.10.0.post2/numpy/core/getlimits.py +308 -0
  74. numpy-1.10.0.post2/numpy/core/include/numpy/ndarrayobject.h +246 -0
  75. numpy-1.10.0.post2/numpy/core/include/numpy/ndarraytypes.h +1797 -0
  76. numpy-1.10.0.post2/numpy/core/include/numpy/npy_3kcompat.h +448 -0
  77. numpy-1.10.0.post2/numpy/core/include/numpy/npy_common.h +1051 -0
  78. numpy-1.10.0.post2/numpy/core/include/numpy/npy_cpu.h +92 -0
  79. numpy-1.10.0.post2/numpy/core/include/numpy/npy_endian.h +61 -0
  80. numpy-1.10.0.post2/numpy/core/include/numpy/npy_math.h +525 -0
  81. numpy-1.10.0.post2/numpy/core/include/numpy/numpyconfig.h +36 -0
  82. numpy-1.10.0.post2/numpy/core/machar.py +342 -0
  83. numpy-1.10.0.post2/numpy/core/memmap.py +311 -0
  84. numpy-1.10.0.post2/numpy/core/numeric.py +2893 -0
  85. numpy-1.10.0.post2/numpy/core/numerictypes.py +1036 -0
  86. numpy-1.10.0.post2/numpy/core/records.py +846 -0
  87. numpy-1.10.0.post2/numpy/core/setup.py +983 -0
  88. numpy-1.10.0.post2/numpy/core/setup_common.py +352 -0
  89. numpy-1.10.0.post2/numpy/core/shape_base.py +350 -0
  90. numpy-1.10.0.post2/numpy/core/src/multiarray/alloc.c +244 -0
  91. numpy-1.10.0.post2/numpy/core/src/multiarray/arrayobject.c +1858 -0
  92. numpy-1.10.0.post2/numpy/core/src/multiarray/arraytypes.c.src +4738 -0
  93. numpy-1.10.0.post2/numpy/core/src/multiarray/arraytypes.h +37 -0
  94. numpy-1.10.0.post2/numpy/core/src/multiarray/buffer.c +981 -0
  95. numpy-1.10.0.post2/numpy/core/src/multiarray/calculation.c +1224 -0
  96. numpy-1.10.0.post2/numpy/core/src/multiarray/cblasfuncs.c +812 -0
  97. numpy-1.10.0.post2/numpy/core/src/multiarray/cblasfuncs.h +10 -0
  98. numpy-1.10.0.post2/numpy/core/src/multiarray/common.c +911 -0
  99. numpy-1.10.0.post2/numpy/core/src/multiarray/common.h +250 -0
  100. numpy-1.10.0.post2/numpy/core/src/multiarray/compiled_base.c +1664 -0
  101. numpy-1.10.0.post2/numpy/core/src/multiarray/compiled_base.h +24 -0
  102. numpy-1.10.0.post2/numpy/core/src/multiarray/conversion_utils.c +1217 -0
  103. numpy-1.10.0.post2/numpy/core/src/multiarray/convert.c +590 -0
  104. numpy-1.10.0.post2/numpy/core/src/multiarray/convert_datatype.c +2155 -0
  105. numpy-1.10.0.post2/numpy/core/src/multiarray/ctors.c +3838 -0
  106. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime.c +3821 -0
  107. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_busday.c +1322 -0
  108. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_busdaycal.c +552 -0
  109. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_strings.c +1772 -0
  110. numpy-1.10.0.post2/numpy/core/src/multiarray/descriptor.c +3719 -0
  111. numpy-1.10.0.post2/numpy/core/src/multiarray/dtype_transfer.c +4239 -0
  112. numpy-1.10.0.post2/numpy/core/src/multiarray/einsum.c.src +3005 -0
  113. numpy-1.10.0.post2/numpy/core/src/multiarray/getset.c +986 -0
  114. numpy-1.10.0.post2/numpy/core/src/multiarray/hashdescr.c +318 -0
  115. numpy-1.10.0.post2/numpy/core/src/multiarray/item_selection.c +2413 -0
  116. numpy-1.10.0.post2/numpy/core/src/multiarray/iterators.c +2192 -0
  117. numpy-1.10.0.post2/numpy/core/src/multiarray/lowlevel_strided_loops.c.src +1769 -0
  118. numpy-1.10.0.post2/numpy/core/src/multiarray/mapping.c +3380 -0
  119. numpy-1.10.0.post2/numpy/core/src/multiarray/mapping.h +77 -0
  120. numpy-1.10.0.post2/numpy/core/src/multiarray/methods.c +2514 -0
  121. numpy-1.10.0.post2/numpy/core/src/multiarray/multiarray_tests.c.src +1035 -0
  122. numpy-1.10.0.post2/numpy/core/src/multiarray/multiarraymodule.c +4628 -0
  123. numpy-1.10.0.post2/numpy/core/src/multiarray/multiarraymodule.h +15 -0
  124. numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_api.c +2809 -0
  125. numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_constr.c +3160 -0
  126. numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_pywrap.c +2499 -0
  127. numpy-1.10.0.post2/numpy/core/src/multiarray/number.c +1106 -0
  128. numpy-1.10.0.post2/numpy/core/src/multiarray/number.h +77 -0
  129. numpy-1.10.0.post2/numpy/core/src/multiarray/numpymemoryview.c +308 -0
  130. numpy-1.10.0.post2/numpy/core/src/multiarray/numpyos.c +683 -0
  131. numpy-1.10.0.post2/numpy/core/src/multiarray/scalarapi.c +870 -0
  132. numpy-1.10.0.post2/numpy/core/src/multiarray/scalartypes.c.src +4343 -0
  133. numpy-1.10.0.post2/numpy/core/src/multiarray/scalartypes.h +55 -0
  134. numpy-1.10.0.post2/numpy/core/src/multiarray/shape.c +1131 -0
  135. numpy-1.10.0.post2/numpy/core/src/multiarray/ucsnarrow.c +174 -0
  136. numpy-1.10.0.post2/numpy/core/src/multiarray/vdot.c +180 -0
  137. numpy-1.10.0.post2/numpy/core/src/multiarray/vdot.h +18 -0
  138. numpy-1.10.0.post2/numpy/core/src/npymath/ieee754.c.src +808 -0
  139. numpy-1.10.0.post2/numpy/core/src/npymath/npy_math.c.src +597 -0
  140. numpy-1.10.0.post2/numpy/core/src/npymath/npy_math_complex.c.src +1788 -0
  141. numpy-1.10.0.post2/numpy/core/src/npymath/npy_math_private.h +544 -0
  142. numpy-1.10.0.post2/numpy/core/src/npysort/heapsort.c.src +402 -0
  143. numpy-1.10.0.post2/numpy/core/src/npysort/mergesort.c.src +488 -0
  144. numpy-1.10.0.post2/numpy/core/src/npysort/npysort_common.h +360 -0
  145. numpy-1.10.0.post2/numpy/core/src/npysort/quicksort.c.src +523 -0
  146. numpy-1.10.0.post2/numpy/core/src/npysort/selection.c.src +426 -0
  147. numpy-1.10.0.post2/numpy/core/src/private/npy_cblas.h +584 -0
  148. numpy-1.10.0.post2/numpy/core/src/private/npy_config.h +101 -0
  149. numpy-1.10.0.post2/numpy/core/src/private/npy_import.h +32 -0
  150. numpy-1.10.0.post2/numpy/core/src/private/npy_partition.h.src +122 -0
  151. numpy-1.10.0.post2/numpy/core/src/private/npy_sort.h +196 -0
  152. numpy-1.10.0.post2/numpy/core/src/private/templ_common.h.src +43 -0
  153. numpy-1.10.0.post2/numpy/core/src/private/ufunc_override.h +397 -0
  154. numpy-1.10.0.post2/numpy/core/src/umath/funcs.inc.src +356 -0
  155. numpy-1.10.0.post2/numpy/core/src/umath/loops.c.src +2675 -0
  156. numpy-1.10.0.post2/numpy/core/src/umath/loops.h.src +497 -0
  157. numpy-1.10.0.post2/numpy/core/src/umath/operand_flag_tests.c.src +105 -0
  158. numpy-1.10.0.post2/numpy/core/src/umath/scalarmath.c.src +1738 -0
  159. numpy-1.10.0.post2/numpy/core/src/umath/simd.inc.src +903 -0
  160. numpy-1.10.0.post2/numpy/core/src/umath/test_rational.c.src +1404 -0
  161. numpy-1.10.0.post2/numpy/core/src/umath/ufunc_object.c +5703 -0
  162. numpy-1.10.0.post2/numpy/core/src/umath/ufunc_type_resolution.c +2159 -0
  163. numpy-1.10.0.post2/numpy/core/src/umath/umath_tests.c.src +392 -0
  164. numpy-1.10.0.post2/numpy/core/src/umath/umathmodule.c +443 -0
  165. numpy-1.10.0.post2/numpy/core/tests/test_abc.py +47 -0
  166. numpy-1.10.0.post2/numpy/core/tests/test_api.py +515 -0
  167. numpy-1.10.0.post2/numpy/core/tests/test_arrayprint.py +171 -0
  168. numpy-1.10.0.post2/numpy/core/tests/test_datetime.py +1820 -0
  169. numpy-1.10.0.post2/numpy/core/tests/test_defchararray.py +703 -0
  170. numpy-1.10.0.post2/numpy/core/tests/test_deprecations.py +619 -0
  171. numpy-1.10.0.post2/numpy/core/tests/test_dtype.py +578 -0
  172. numpy-1.10.0.post2/numpy/core/tests/test_einsum.py +627 -0
  173. numpy-1.10.0.post2/numpy/core/tests/test_errstate.py +52 -0
  174. numpy-1.10.0.post2/numpy/core/tests/test_function_base.py +142 -0
  175. numpy-1.10.0.post2/numpy/core/tests/test_getlimits.py +77 -0
  176. numpy-1.10.0.post2/numpy/core/tests/test_half.py +436 -0
  177. numpy-1.10.0.post2/numpy/core/tests/test_indexerrors.py +126 -0
  178. numpy-1.10.0.post2/numpy/core/tests/test_indexing.py +1047 -0
  179. numpy-1.10.0.post2/numpy/core/tests/test_item_selection.py +73 -0
  180. numpy-1.10.0.post2/numpy/core/tests/test_machar.py +29 -0
  181. numpy-1.10.0.post2/numpy/core/tests/test_memmap.py +130 -0
  182. numpy-1.10.0.post2/numpy/core/tests/test_multiarray.py +5924 -0
  183. numpy-1.10.0.post2/numpy/core/tests/test_multiarray_assignment.py +84 -0
  184. numpy-1.10.0.post2/numpy/core/tests/test_nditer.py +2638 -0
  185. numpy-1.10.0.post2/numpy/core/tests/test_numeric.py +2204 -0
  186. numpy-1.10.0.post2/numpy/core/tests/test_numerictypes.py +382 -0
  187. numpy-1.10.0.post2/numpy/core/tests/test_print.py +248 -0
  188. numpy-1.10.0.post2/numpy/core/tests/test_records.py +299 -0
  189. numpy-1.10.0.post2/numpy/core/tests/test_regression.py +2177 -0
  190. numpy-1.10.0.post2/numpy/core/tests/test_scalarinherit.py +41 -0
  191. numpy-1.10.0.post2/numpy/core/tests/test_scalarmath.py +316 -0
  192. numpy-1.10.0.post2/numpy/core/tests/test_shape_base.py +319 -0
  193. numpy-1.10.0.post2/numpy/core/tests/test_ufunc.py +1227 -0
  194. numpy-1.10.0.post2/numpy/core/tests/test_umath.py +1933 -0
  195. numpy-1.10.0.post2/numpy/core/tests/test_umath_complex.py +538 -0
  196. numpy-1.10.0.post2/numpy/core/tests/test_unicode.py +360 -0
  197. numpy-1.10.0.post2/numpy/distutils/__init__.py +23 -0
  198. numpy-1.10.0.post2/numpy/distutils/ccompiler.py +690 -0
  199. numpy-1.10.0.post2/numpy/distutils/command/autodist.py +94 -0
  200. numpy-1.10.0.post2/numpy/distutils/command/build.py +47 -0
  201. numpy-1.10.0.post2/numpy/distutils/command/build_clib.py +295 -0
  202. numpy-1.10.0.post2/numpy/distutils/command/build_ext.py +522 -0
  203. numpy-1.10.0.post2/numpy/distutils/command/config.py +437 -0
  204. numpy-1.10.0.post2/numpy/distutils/exec_command.py +651 -0
  205. numpy-1.10.0.post2/numpy/distutils/fcompiler/compaq.py +128 -0
  206. numpy-1.10.0.post2/numpy/distutils/fcompiler/gnu.py +403 -0
  207. numpy-1.10.0.post2/numpy/distutils/fcompiler/intel.py +217 -0
  208. numpy-1.10.0.post2/numpy/distutils/fcompiler/pg.py +63 -0
  209. numpy-1.10.0.post2/numpy/distutils/fcompiler/sun.py +55 -0
  210. numpy-1.10.0.post2/numpy/distutils/intelccompiler.py +95 -0
  211. numpy-1.10.0.post2/numpy/distutils/lib2def.py +116 -0
  212. numpy-1.10.0.post2/numpy/distutils/mingw32ccompiler.py +599 -0
  213. numpy-1.10.0.post2/numpy/distutils/misc_util.py +2306 -0
  214. numpy-1.10.0.post2/numpy/distutils/msvc9compiler.py +23 -0
  215. numpy-1.10.0.post2/numpy/distutils/msvccompiler.py +17 -0
  216. numpy-1.10.0.post2/numpy/distutils/npy_pkg_config.py +451 -0
  217. numpy-1.10.0.post2/numpy/distutils/system_info.py +2397 -0
  218. numpy-1.10.0.post2/numpy/distutils/tests/f2py_ext/tests/test_fib2.py +12 -0
  219. numpy-1.10.0.post2/numpy/distutils/tests/f2py_f90_ext/tests/test_foo.py +11 -0
  220. numpy-1.10.0.post2/numpy/distutils/tests/gen_ext/tests/test_fib3.py +11 -0
  221. numpy-1.10.0.post2/numpy/distutils/tests/pyrex_ext/tests/test_primes.py +13 -0
  222. numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/__init__.py +1 -0
  223. numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/tests/test_example.py +17 -0
  224. numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/tests/test_example2.py +15 -0
  225. numpy-1.10.0.post2/numpy/distutils/tests/test_fcompiler_gnu.py +60 -0
  226. numpy-1.10.0.post2/numpy/distutils/tests/test_fcompiler_intel.py +36 -0
  227. numpy-1.10.0.post2/numpy/distutils/tests/test_misc_util.py +79 -0
  228. numpy-1.10.0.post2/numpy/distutils/tests/test_npy_pkg_config.py +102 -0
  229. numpy-1.10.0.post2/numpy/distutils/tests/test_system_info.py +209 -0
  230. numpy-1.10.0.post2/numpy/distutils/unixccompiler.py +125 -0
  231. numpy-1.10.0.post2/numpy/doc/byteswapping.py +156 -0
  232. numpy-1.10.0.post2/numpy/doc/creation.py +144 -0
  233. numpy-1.10.0.post2/numpy/doc/glossary.py +423 -0
  234. numpy-1.10.0.post2/numpy/doc/indexing.py +439 -0
  235. numpy-1.10.0.post2/numpy/doc/structured_arrays.py +290 -0
  236. numpy-1.10.0.post2/numpy/f2py/__init__.py +49 -0
  237. numpy-1.10.0.post2/numpy/f2py/__main__.py +25 -0
  238. numpy-1.10.0.post2/numpy/f2py/auxfuncs.py +858 -0
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  1555. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/info.py +0 -0
  1556. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/Python.pxi +0 -0
  1557. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/distributions.h +0 -0
  1558. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/generate_mtrand_c.py +0 -0
  1559. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/initarray.c +0 -0
  1560. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/initarray.h +0 -0
  1561. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/mtrand_py_helper.h +0 -0
  1562. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/numpy.pxd +0 -0
  1563. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/randomkit.c +0 -0
  1564. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/random/mtrand/randomkit.h +0 -0
  1565. {numpy-1.9.3 → numpy-1.10.0.post2}/numpy/testing/tests/test_doctesting.py +0 -0
  1566. {numpy-1.9.3 → numpy-1.10.0.post2}/setupegg.py +0 -0
  1567. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/Makefile +0 -0
  1568. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/pyfragments.swg +0 -0
  1569. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Array1.cxx +0 -0
  1570. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Array1.h +0 -0
  1571. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Array2.cxx +0 -0
  1572. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Array2.h +0 -0
  1573. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Farray.cxx +0 -0
  1574. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Farray.h +0 -0
  1575. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Farray.i +0 -0
  1576. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Fortran.cxx +0 -0
  1577. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Fortran.h +0 -0
  1578. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Fortran.i +0 -0
  1579. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Matrix.cxx +0 -0
  1580. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Matrix.h +0 -0
  1581. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Matrix.i +0 -0
  1582. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/SuperTensor.cxx +0 -0
  1583. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/SuperTensor.h +0 -0
  1584. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/SuperTensor.i +0 -0
  1585. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Tensor.cxx +0 -0
  1586. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Tensor.h +0 -0
  1587. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Tensor.i +0 -0
  1588. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Vector.cxx +0 -0
  1589. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Vector.h +0 -0
  1590. {numpy-1.9.3 → numpy-1.10.0.post2}/tools/swig/test/Vector.i +0 -0
@@ -0,0 +1,1497 @@
1
+ """
2
+ The arraypad module contains a group of functions to pad values onto the edges
3
+ of an n-dimensional array.
4
+
5
+ """
6
+ from __future__ import division, absolute_import, print_function
7
+
8
+ import numpy as np
9
+
10
+
11
+ __all__ = ['pad']
12
+
13
+
14
+ ###############################################################################
15
+ # Private utility functions.
16
+
17
+
18
+ def _arange_ndarray(arr, shape, axis, reverse=False):
19
+ """
20
+ Create an ndarray of `shape` with increments along specified `axis`
21
+
22
+ Parameters
23
+ ----------
24
+ arr : ndarray
25
+ Input array of arbitrary shape.
26
+ shape : tuple of ints
27
+ Shape of desired array. Should be equivalent to `arr.shape` except
28
+ `shape[axis]` which may have any positive value.
29
+ axis : int
30
+ Axis to increment along.
31
+ reverse : bool
32
+ If False, increment in a positive fashion from 1 to `shape[axis]`,
33
+ inclusive. If True, the bounds are the same but the order reversed.
34
+
35
+ Returns
36
+ -------
37
+ padarr : ndarray
38
+ Output array sized to pad `arr` along `axis`, with linear range from
39
+ 1 to `shape[axis]` along specified `axis`.
40
+
41
+ Notes
42
+ -----
43
+ The range is deliberately 1-indexed for this specific use case. Think of
44
+ this algorithm as broadcasting `np.arange` to a single `axis` of an
45
+ arbitrarily shaped ndarray.
46
+
47
+ """
48
+ initshape = tuple(1 if i != axis else shape[axis]
49
+ for (i, x) in enumerate(arr.shape))
50
+ if not reverse:
51
+ padarr = np.arange(1, shape[axis] + 1)
52
+ else:
53
+ padarr = np.arange(shape[axis], 0, -1)
54
+ padarr = padarr.reshape(initshape)
55
+ for i, dim in enumerate(shape):
56
+ if padarr.shape[i] != dim:
57
+ padarr = padarr.repeat(dim, axis=i)
58
+ return padarr
59
+
60
+
61
+ def _round_ifneeded(arr, dtype):
62
+ """
63
+ Rounds arr inplace if destination dtype is integer.
64
+
65
+ Parameters
66
+ ----------
67
+ arr : ndarray
68
+ Input array.
69
+ dtype : dtype
70
+ The dtype of the destination array.
71
+
72
+ """
73
+ if np.issubdtype(dtype, np.integer):
74
+ arr.round(out=arr)
75
+
76
+
77
+ def _prepend_const(arr, pad_amt, val, axis=-1):
78
+ """
79
+ Prepend constant `val` along `axis` of `arr`.
80
+
81
+ Parameters
82
+ ----------
83
+ arr : ndarray
84
+ Input array of arbitrary shape.
85
+ pad_amt : int
86
+ Amount of padding to prepend.
87
+ val : scalar
88
+ Constant value to use. For best results should be of type `arr.dtype`;
89
+ if not `arr.dtype` will be cast to `arr.dtype`.
90
+ axis : int
91
+ Axis along which to pad `arr`.
92
+
93
+ Returns
94
+ -------
95
+ padarr : ndarray
96
+ Output array, with `pad_amt` constant `val` prepended along `axis`.
97
+
98
+ """
99
+ if pad_amt == 0:
100
+ return arr
101
+ padshape = tuple(x if i != axis else pad_amt
102
+ for (i, x) in enumerate(arr.shape))
103
+ if val == 0:
104
+ return np.concatenate((np.zeros(padshape, dtype=arr.dtype), arr),
105
+ axis=axis)
106
+ else:
107
+ return np.concatenate(((np.zeros(padshape) + val).astype(arr.dtype),
108
+ arr), axis=axis)
109
+
110
+
111
+ def _append_const(arr, pad_amt, val, axis=-1):
112
+ """
113
+ Append constant `val` along `axis` of `arr`.
114
+
115
+ Parameters
116
+ ----------
117
+ arr : ndarray
118
+ Input array of arbitrary shape.
119
+ pad_amt : int
120
+ Amount of padding to append.
121
+ val : scalar
122
+ Constant value to use. For best results should be of type `arr.dtype`;
123
+ if not `arr.dtype` will be cast to `arr.dtype`.
124
+ axis : int
125
+ Axis along which to pad `arr`.
126
+
127
+ Returns
128
+ -------
129
+ padarr : ndarray
130
+ Output array, with `pad_amt` constant `val` appended along `axis`.
131
+
132
+ """
133
+ if pad_amt == 0:
134
+ return arr
135
+ padshape = tuple(x if i != axis else pad_amt
136
+ for (i, x) in enumerate(arr.shape))
137
+ if val == 0:
138
+ return np.concatenate((arr, np.zeros(padshape, dtype=arr.dtype)),
139
+ axis=axis)
140
+ else:
141
+ return np.concatenate(
142
+ (arr, (np.zeros(padshape) + val).astype(arr.dtype)), axis=axis)
143
+
144
+
145
+ def _prepend_edge(arr, pad_amt, axis=-1):
146
+ """
147
+ Prepend `pad_amt` to `arr` along `axis` by extending edge values.
148
+
149
+ Parameters
150
+ ----------
151
+ arr : ndarray
152
+ Input array of arbitrary shape.
153
+ pad_amt : int
154
+ Amount of padding to prepend.
155
+ axis : int
156
+ Axis along which to pad `arr`.
157
+
158
+ Returns
159
+ -------
160
+ padarr : ndarray
161
+ Output array, extended by `pad_amt` edge values appended along `axis`.
162
+
163
+ """
164
+ if pad_amt == 0:
165
+ return arr
166
+
167
+ edge_slice = tuple(slice(None) if i != axis else 0
168
+ for (i, x) in enumerate(arr.shape))
169
+
170
+ # Shape to restore singleton dimension after slicing
171
+ pad_singleton = tuple(x if i != axis else 1
172
+ for (i, x) in enumerate(arr.shape))
173
+ edge_arr = arr[edge_slice].reshape(pad_singleton)
174
+ return np.concatenate((edge_arr.repeat(pad_amt, axis=axis), arr),
175
+ axis=axis)
176
+
177
+
178
+ def _append_edge(arr, pad_amt, axis=-1):
179
+ """
180
+ Append `pad_amt` to `arr` along `axis` by extending edge values.
181
+
182
+ Parameters
183
+ ----------
184
+ arr : ndarray
185
+ Input array of arbitrary shape.
186
+ pad_amt : int
187
+ Amount of padding to append.
188
+ axis : int
189
+ Axis along which to pad `arr`.
190
+
191
+ Returns
192
+ -------
193
+ padarr : ndarray
194
+ Output array, extended by `pad_amt` edge values prepended along
195
+ `axis`.
196
+
197
+ """
198
+ if pad_amt == 0:
199
+ return arr
200
+
201
+ edge_slice = tuple(slice(None) if i != axis else arr.shape[axis] - 1
202
+ for (i, x) in enumerate(arr.shape))
203
+
204
+ # Shape to restore singleton dimension after slicing
205
+ pad_singleton = tuple(x if i != axis else 1
206
+ for (i, x) in enumerate(arr.shape))
207
+ edge_arr = arr[edge_slice].reshape(pad_singleton)
208
+ return np.concatenate((arr, edge_arr.repeat(pad_amt, axis=axis)),
209
+ axis=axis)
210
+
211
+
212
+ def _prepend_ramp(arr, pad_amt, end, axis=-1):
213
+ """
214
+ Prepend linear ramp along `axis`.
215
+
216
+ Parameters
217
+ ----------
218
+ arr : ndarray
219
+ Input array of arbitrary shape.
220
+ pad_amt : int
221
+ Amount of padding to prepend.
222
+ end : scalar
223
+ Constal value to use. For best results should be of type `arr.dtype`;
224
+ if not `arr.dtype` will be cast to `arr.dtype`.
225
+ axis : int
226
+ Axis along which to pad `arr`.
227
+
228
+ Returns
229
+ -------
230
+ padarr : ndarray
231
+ Output array, with `pad_amt` values prepended along `axis`. The
232
+ prepended region ramps linearly from the edge value to `end`.
233
+
234
+ """
235
+ if pad_amt == 0:
236
+ return arr
237
+
238
+ # Generate shape for final concatenated array
239
+ padshape = tuple(x if i != axis else pad_amt
240
+ for (i, x) in enumerate(arr.shape))
241
+
242
+ # Generate an n-dimensional array incrementing along `axis`
243
+ ramp_arr = _arange_ndarray(arr, padshape, axis,
244
+ reverse=True).astype(np.float64)
245
+
246
+ # Appropriate slicing to extract n-dimensional edge along `axis`
247
+ edge_slice = tuple(slice(None) if i != axis else 0
248
+ for (i, x) in enumerate(arr.shape))
249
+
250
+ # Shape to restore singleton dimension after slicing
251
+ pad_singleton = tuple(x if i != axis else 1
252
+ for (i, x) in enumerate(arr.shape))
253
+
254
+ # Extract edge, reshape to original rank, and extend along `axis`
255
+ edge_pad = arr[edge_slice].reshape(pad_singleton).repeat(pad_amt, axis)
256
+
257
+ # Linear ramp
258
+ slope = (end - edge_pad) / float(pad_amt)
259
+ ramp_arr = ramp_arr * slope
260
+ ramp_arr += edge_pad
261
+ _round_ifneeded(ramp_arr, arr.dtype)
262
+
263
+ # Ramp values will most likely be float, cast them to the same type as arr
264
+ return np.concatenate((ramp_arr.astype(arr.dtype), arr), axis=axis)
265
+
266
+
267
+ def _append_ramp(arr, pad_amt, end, axis=-1):
268
+ """
269
+ Append linear ramp along `axis`.
270
+
271
+ Parameters
272
+ ----------
273
+ arr : ndarray
274
+ Input array of arbitrary shape.
275
+ pad_amt : int
276
+ Amount of padding to append.
277
+ end : scalar
278
+ Constal value to use. For best results should be of type `arr.dtype`;
279
+ if not `arr.dtype` will be cast to `arr.dtype`.
280
+ axis : int
281
+ Axis along which to pad `arr`.
282
+
283
+ Returns
284
+ -------
285
+ padarr : ndarray
286
+ Output array, with `pad_amt` values appended along `axis`. The
287
+ appended region ramps linearly from the edge value to `end`.
288
+
289
+ """
290
+ if pad_amt == 0:
291
+ return arr
292
+
293
+ # Generate shape for final concatenated array
294
+ padshape = tuple(x if i != axis else pad_amt
295
+ for (i, x) in enumerate(arr.shape))
296
+
297
+ # Generate an n-dimensional array incrementing along `axis`
298
+ ramp_arr = _arange_ndarray(arr, padshape, axis,
299
+ reverse=False).astype(np.float64)
300
+
301
+ # Slice a chunk from the edge to calculate stats on
302
+ edge_slice = tuple(slice(None) if i != axis else -1
303
+ for (i, x) in enumerate(arr.shape))
304
+
305
+ # Shape to restore singleton dimension after slicing
306
+ pad_singleton = tuple(x if i != axis else 1
307
+ for (i, x) in enumerate(arr.shape))
308
+
309
+ # Extract edge, reshape to original rank, and extend along `axis`
310
+ edge_pad = arr[edge_slice].reshape(pad_singleton).repeat(pad_amt, axis)
311
+
312
+ # Linear ramp
313
+ slope = (end - edge_pad) / float(pad_amt)
314
+ ramp_arr = ramp_arr * slope
315
+ ramp_arr += edge_pad
316
+ _round_ifneeded(ramp_arr, arr.dtype)
317
+
318
+ # Ramp values will most likely be float, cast them to the same type as arr
319
+ return np.concatenate((arr, ramp_arr.astype(arr.dtype)), axis=axis)
320
+
321
+
322
+ def _prepend_max(arr, pad_amt, num, axis=-1):
323
+ """
324
+ Prepend `pad_amt` maximum values along `axis`.
325
+
326
+ Parameters
327
+ ----------
328
+ arr : ndarray
329
+ Input array of arbitrary shape.
330
+ pad_amt : int
331
+ Amount of padding to prepend.
332
+ num : int
333
+ Depth into `arr` along `axis` to calculate maximum.
334
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
335
+ axis : int
336
+ Axis along which to pad `arr`.
337
+
338
+ Returns
339
+ -------
340
+ padarr : ndarray
341
+ Output array, with `pad_amt` values appended along `axis`. The
342
+ prepended region is the maximum of the first `num` values along
343
+ `axis`.
344
+
345
+ """
346
+ if pad_amt == 0:
347
+ return arr
348
+
349
+ # Equivalent to edge padding for single value, so do that instead
350
+ if num == 1:
351
+ return _prepend_edge(arr, pad_amt, axis)
352
+
353
+ # Use entire array if `num` is too large
354
+ if num is not None:
355
+ if num >= arr.shape[axis]:
356
+ num = None
357
+
358
+ # Slice a chunk from the edge to calculate stats on
359
+ max_slice = tuple(slice(None) if i != axis else slice(num)
360
+ for (i, x) in enumerate(arr.shape))
361
+
362
+ # Shape to restore singleton dimension after slicing
363
+ pad_singleton = tuple(x if i != axis else 1
364
+ for (i, x) in enumerate(arr.shape))
365
+
366
+ # Extract slice, calculate max, reshape to add singleton dimension back
367
+ max_chunk = arr[max_slice].max(axis=axis).reshape(pad_singleton)
368
+
369
+ # Concatenate `arr` with `max_chunk`, extended along `axis` by `pad_amt`
370
+ return np.concatenate((max_chunk.repeat(pad_amt, axis=axis), arr),
371
+ axis=axis)
372
+
373
+
374
+ def _append_max(arr, pad_amt, num, axis=-1):
375
+ """
376
+ Pad one `axis` of `arr` with the maximum of the last `num` elements.
377
+
378
+ Parameters
379
+ ----------
380
+ arr : ndarray
381
+ Input array of arbitrary shape.
382
+ pad_amt : int
383
+ Amount of padding to append.
384
+ num : int
385
+ Depth into `arr` along `axis` to calculate maximum.
386
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
387
+ axis : int
388
+ Axis along which to pad `arr`.
389
+
390
+ Returns
391
+ -------
392
+ padarr : ndarray
393
+ Output array, with `pad_amt` values appended along `axis`. The
394
+ appended region is the maximum of the final `num` values along `axis`.
395
+
396
+ """
397
+ if pad_amt == 0:
398
+ return arr
399
+
400
+ # Equivalent to edge padding for single value, so do that instead
401
+ if num == 1:
402
+ return _append_edge(arr, pad_amt, axis)
403
+
404
+ # Use entire array if `num` is too large
405
+ if num is not None:
406
+ if num >= arr.shape[axis]:
407
+ num = None
408
+
409
+ # Slice a chunk from the edge to calculate stats on
410
+ end = arr.shape[axis] - 1
411
+ if num is not None:
412
+ max_slice = tuple(
413
+ slice(None) if i != axis else slice(end, end - num, -1)
414
+ for (i, x) in enumerate(arr.shape))
415
+ else:
416
+ max_slice = tuple(slice(None) for x in arr.shape)
417
+
418
+ # Shape to restore singleton dimension after slicing
419
+ pad_singleton = tuple(x if i != axis else 1
420
+ for (i, x) in enumerate(arr.shape))
421
+
422
+ # Extract slice, calculate max, reshape to add singleton dimension back
423
+ max_chunk = arr[max_slice].max(axis=axis).reshape(pad_singleton)
424
+
425
+ # Concatenate `arr` with `max_chunk`, extended along `axis` by `pad_amt`
426
+ return np.concatenate((arr, max_chunk.repeat(pad_amt, axis=axis)),
427
+ axis=axis)
428
+
429
+
430
+ def _prepend_mean(arr, pad_amt, num, axis=-1):
431
+ """
432
+ Prepend `pad_amt` mean values along `axis`.
433
+
434
+ Parameters
435
+ ----------
436
+ arr : ndarray
437
+ Input array of arbitrary shape.
438
+ pad_amt : int
439
+ Amount of padding to prepend.
440
+ num : int
441
+ Depth into `arr` along `axis` to calculate mean.
442
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
443
+ axis : int
444
+ Axis along which to pad `arr`.
445
+
446
+ Returns
447
+ -------
448
+ padarr : ndarray
449
+ Output array, with `pad_amt` values prepended along `axis`. The
450
+ prepended region is the mean of the first `num` values along `axis`.
451
+
452
+ """
453
+ if pad_amt == 0:
454
+ return arr
455
+
456
+ # Equivalent to edge padding for single value, so do that instead
457
+ if num == 1:
458
+ return _prepend_edge(arr, pad_amt, axis)
459
+
460
+ # Use entire array if `num` is too large
461
+ if num is not None:
462
+ if num >= arr.shape[axis]:
463
+ num = None
464
+
465
+ # Slice a chunk from the edge to calculate stats on
466
+ mean_slice = tuple(slice(None) if i != axis else slice(num)
467
+ for (i, x) in enumerate(arr.shape))
468
+
469
+ # Shape to restore singleton dimension after slicing
470
+ pad_singleton = tuple(x if i != axis else 1
471
+ for (i, x) in enumerate(arr.shape))
472
+
473
+ # Extract slice, calculate mean, reshape to add singleton dimension back
474
+ mean_chunk = arr[mean_slice].mean(axis).reshape(pad_singleton)
475
+ _round_ifneeded(mean_chunk, arr.dtype)
476
+
477
+ # Concatenate `arr` with `mean_chunk`, extended along `axis` by `pad_amt`
478
+ return np.concatenate((mean_chunk.repeat(pad_amt, axis).astype(arr.dtype),
479
+ arr), axis=axis)
480
+
481
+
482
+ def _append_mean(arr, pad_amt, num, axis=-1):
483
+ """
484
+ Append `pad_amt` mean values along `axis`.
485
+
486
+ Parameters
487
+ ----------
488
+ arr : ndarray
489
+ Input array of arbitrary shape.
490
+ pad_amt : int
491
+ Amount of padding to append.
492
+ num : int
493
+ Depth into `arr` along `axis` to calculate mean.
494
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
495
+ axis : int
496
+ Axis along which to pad `arr`.
497
+
498
+ Returns
499
+ -------
500
+ padarr : ndarray
501
+ Output array, with `pad_amt` values appended along `axis`. The
502
+ appended region is the maximum of the final `num` values along `axis`.
503
+
504
+ """
505
+ if pad_amt == 0:
506
+ return arr
507
+
508
+ # Equivalent to edge padding for single value, so do that instead
509
+ if num == 1:
510
+ return _append_edge(arr, pad_amt, axis)
511
+
512
+ # Use entire array if `num` is too large
513
+ if num is not None:
514
+ if num >= arr.shape[axis]:
515
+ num = None
516
+
517
+ # Slice a chunk from the edge to calculate stats on
518
+ end = arr.shape[axis] - 1
519
+ if num is not None:
520
+ mean_slice = tuple(
521
+ slice(None) if i != axis else slice(end, end - num, -1)
522
+ for (i, x) in enumerate(arr.shape))
523
+ else:
524
+ mean_slice = tuple(slice(None) for x in arr.shape)
525
+
526
+ # Shape to restore singleton dimension after slicing
527
+ pad_singleton = tuple(x if i != axis else 1
528
+ for (i, x) in enumerate(arr.shape))
529
+
530
+ # Extract slice, calculate mean, reshape to add singleton dimension back
531
+ mean_chunk = arr[mean_slice].mean(axis=axis).reshape(pad_singleton)
532
+ _round_ifneeded(mean_chunk, arr.dtype)
533
+
534
+ # Concatenate `arr` with `mean_chunk`, extended along `axis` by `pad_amt`
535
+ return np.concatenate(
536
+ (arr, mean_chunk.repeat(pad_amt, axis).astype(arr.dtype)), axis=axis)
537
+
538
+
539
+ def _prepend_med(arr, pad_amt, num, axis=-1):
540
+ """
541
+ Prepend `pad_amt` median values along `axis`.
542
+
543
+ Parameters
544
+ ----------
545
+ arr : ndarray
546
+ Input array of arbitrary shape.
547
+ pad_amt : int
548
+ Amount of padding to prepend.
549
+ num : int
550
+ Depth into `arr` along `axis` to calculate median.
551
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
552
+ axis : int
553
+ Axis along which to pad `arr`.
554
+
555
+ Returns
556
+ -------
557
+ padarr : ndarray
558
+ Output array, with `pad_amt` values prepended along `axis`. The
559
+ prepended region is the median of the first `num` values along `axis`.
560
+
561
+ """
562
+ if pad_amt == 0:
563
+ return arr
564
+
565
+ # Equivalent to edge padding for single value, so do that instead
566
+ if num == 1:
567
+ return _prepend_edge(arr, pad_amt, axis)
568
+
569
+ # Use entire array if `num` is too large
570
+ if num is not None:
571
+ if num >= arr.shape[axis]:
572
+ num = None
573
+
574
+ # Slice a chunk from the edge to calculate stats on
575
+ med_slice = tuple(slice(None) if i != axis else slice(num)
576
+ for (i, x) in enumerate(arr.shape))
577
+
578
+ # Shape to restore singleton dimension after slicing
579
+ pad_singleton = tuple(x if i != axis else 1
580
+ for (i, x) in enumerate(arr.shape))
581
+
582
+ # Extract slice, calculate median, reshape to add singleton dimension back
583
+ med_chunk = np.median(arr[med_slice], axis=axis).reshape(pad_singleton)
584
+ _round_ifneeded(med_chunk, arr.dtype)
585
+
586
+ # Concatenate `arr` with `med_chunk`, extended along `axis` by `pad_amt`
587
+ return np.concatenate(
588
+ (med_chunk.repeat(pad_amt, axis).astype(arr.dtype), arr), axis=axis)
589
+
590
+
591
+ def _append_med(arr, pad_amt, num, axis=-1):
592
+ """
593
+ Append `pad_amt` median values along `axis`.
594
+
595
+ Parameters
596
+ ----------
597
+ arr : ndarray
598
+ Input array of arbitrary shape.
599
+ pad_amt : int
600
+ Amount of padding to append.
601
+ num : int
602
+ Depth into `arr` along `axis` to calculate median.
603
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
604
+ axis : int
605
+ Axis along which to pad `arr`.
606
+
607
+ Returns
608
+ -------
609
+ padarr : ndarray
610
+ Output array, with `pad_amt` values appended along `axis`. The
611
+ appended region is the median of the final `num` values along `axis`.
612
+
613
+ """
614
+ if pad_amt == 0:
615
+ return arr
616
+
617
+ # Equivalent to edge padding for single value, so do that instead
618
+ if num == 1:
619
+ return _append_edge(arr, pad_amt, axis)
620
+
621
+ # Use entire array if `num` is too large
622
+ if num is not None:
623
+ if num >= arr.shape[axis]:
624
+ num = None
625
+
626
+ # Slice a chunk from the edge to calculate stats on
627
+ end = arr.shape[axis] - 1
628
+ if num is not None:
629
+ med_slice = tuple(
630
+ slice(None) if i != axis else slice(end, end - num, -1)
631
+ for (i, x) in enumerate(arr.shape))
632
+ else:
633
+ med_slice = tuple(slice(None) for x in arr.shape)
634
+
635
+ # Shape to restore singleton dimension after slicing
636
+ pad_singleton = tuple(x if i != axis else 1
637
+ for (i, x) in enumerate(arr.shape))
638
+
639
+ # Extract slice, calculate median, reshape to add singleton dimension back
640
+ med_chunk = np.median(arr[med_slice], axis=axis).reshape(pad_singleton)
641
+ _round_ifneeded(med_chunk, arr.dtype)
642
+
643
+ # Concatenate `arr` with `med_chunk`, extended along `axis` by `pad_amt`
644
+ return np.concatenate(
645
+ (arr, med_chunk.repeat(pad_amt, axis).astype(arr.dtype)), axis=axis)
646
+
647
+
648
+ def _prepend_min(arr, pad_amt, num, axis=-1):
649
+ """
650
+ Prepend `pad_amt` minimum values along `axis`.
651
+
652
+ Parameters
653
+ ----------
654
+ arr : ndarray
655
+ Input array of arbitrary shape.
656
+ pad_amt : int
657
+ Amount of padding to prepend.
658
+ num : int
659
+ Depth into `arr` along `axis` to calculate minimum.
660
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
661
+ axis : int
662
+ Axis along which to pad `arr`.
663
+
664
+ Returns
665
+ -------
666
+ padarr : ndarray
667
+ Output array, with `pad_amt` values prepended along `axis`. The
668
+ prepended region is the minimum of the first `num` values along
669
+ `axis`.
670
+
671
+ """
672
+ if pad_amt == 0:
673
+ return arr
674
+
675
+ # Equivalent to edge padding for single value, so do that instead
676
+ if num == 1:
677
+ return _prepend_edge(arr, pad_amt, axis)
678
+
679
+ # Use entire array if `num` is too large
680
+ if num is not None:
681
+ if num >= arr.shape[axis]:
682
+ num = None
683
+
684
+ # Slice a chunk from the edge to calculate stats on
685
+ min_slice = tuple(slice(None) if i != axis else slice(num)
686
+ for (i, x) in enumerate(arr.shape))
687
+
688
+ # Shape to restore singleton dimension after slicing
689
+ pad_singleton = tuple(x if i != axis else 1
690
+ for (i, x) in enumerate(arr.shape))
691
+
692
+ # Extract slice, calculate min, reshape to add singleton dimension back
693
+ min_chunk = arr[min_slice].min(axis=axis).reshape(pad_singleton)
694
+
695
+ # Concatenate `arr` with `min_chunk`, extended along `axis` by `pad_amt`
696
+ return np.concatenate((min_chunk.repeat(pad_amt, axis=axis), arr),
697
+ axis=axis)
698
+
699
+
700
+ def _append_min(arr, pad_amt, num, axis=-1):
701
+ """
702
+ Append `pad_amt` median values along `axis`.
703
+
704
+ Parameters
705
+ ----------
706
+ arr : ndarray
707
+ Input array of arbitrary shape.
708
+ pad_amt : int
709
+ Amount of padding to append.
710
+ num : int
711
+ Depth into `arr` along `axis` to calculate minimum.
712
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
713
+ axis : int
714
+ Axis along which to pad `arr`.
715
+
716
+ Returns
717
+ -------
718
+ padarr : ndarray
719
+ Output array, with `pad_amt` values appended along `axis`. The
720
+ appended region is the minimum of the final `num` values along `axis`.
721
+
722
+ """
723
+ if pad_amt == 0:
724
+ return arr
725
+
726
+ # Equivalent to edge padding for single value, so do that instead
727
+ if num == 1:
728
+ return _append_edge(arr, pad_amt, axis)
729
+
730
+ # Use entire array if `num` is too large
731
+ if num is not None:
732
+ if num >= arr.shape[axis]:
733
+ num = None
734
+
735
+ # Slice a chunk from the edge to calculate stats on
736
+ end = arr.shape[axis] - 1
737
+ if num is not None:
738
+ min_slice = tuple(
739
+ slice(None) if i != axis else slice(end, end - num, -1)
740
+ for (i, x) in enumerate(arr.shape))
741
+ else:
742
+ min_slice = tuple(slice(None) for x in arr.shape)
743
+
744
+ # Shape to restore singleton dimension after slicing
745
+ pad_singleton = tuple(x if i != axis else 1
746
+ for (i, x) in enumerate(arr.shape))
747
+
748
+ # Extract slice, calculate min, reshape to add singleton dimension back
749
+ min_chunk = arr[min_slice].min(axis=axis).reshape(pad_singleton)
750
+
751
+ # Concatenate `arr` with `min_chunk`, extended along `axis` by `pad_amt`
752
+ return np.concatenate((arr, min_chunk.repeat(pad_amt, axis=axis)),
753
+ axis=axis)
754
+
755
+
756
+ def _pad_ref(arr, pad_amt, method, axis=-1):
757
+ """
758
+ Pad `axis` of `arr` by reflection.
759
+
760
+ Parameters
761
+ ----------
762
+ arr : ndarray
763
+ Input array of arbitrary shape.
764
+ pad_amt : tuple of ints, length 2
765
+ Padding to (prepend, append) along `axis`.
766
+ method : str
767
+ Controls method of reflection; options are 'even' or 'odd'.
768
+ axis : int
769
+ Axis along which to pad `arr`.
770
+
771
+ Returns
772
+ -------
773
+ padarr : ndarray
774
+ Output array, with `pad_amt[0]` values prepended and `pad_amt[1]`
775
+ values appended along `axis`. Both regions are padded with reflected
776
+ values from the original array.
777
+
778
+ Notes
779
+ -----
780
+ This algorithm does not pad with repetition, i.e. the edges are not
781
+ repeated in the reflection. For that behavior, use `mode='symmetric'`.
782
+
783
+ The modes 'reflect', 'symmetric', and 'wrap' must be padded with a
784
+ single function, lest the indexing tricks in non-integer multiples of the
785
+ original shape would violate repetition in the final iteration.
786
+
787
+ """
788
+ # Implicit booleanness to test for zero (or None) in any scalar type
789
+ if pad_amt[0] == 0 and pad_amt[1] == 0:
790
+ return arr
791
+
792
+ ##########################################################################
793
+ # Prepended region
794
+
795
+ # Slice off a reverse indexed chunk from near edge to pad `arr` before
796
+ ref_slice = tuple(slice(None) if i != axis else slice(pad_amt[0], 0, -1)
797
+ for (i, x) in enumerate(arr.shape))
798
+
799
+ ref_chunk1 = arr[ref_slice]
800
+
801
+ # Shape to restore singleton dimension after slicing
802
+ pad_singleton = tuple(x if i != axis else 1
803
+ for (i, x) in enumerate(arr.shape))
804
+ if pad_amt[0] == 1:
805
+ ref_chunk1 = ref_chunk1.reshape(pad_singleton)
806
+
807
+ # Memory/computationally more expensive, only do this if `method='odd'`
808
+ if 'odd' in method and pad_amt[0] > 0:
809
+ edge_slice1 = tuple(slice(None) if i != axis else 0
810
+ for (i, x) in enumerate(arr.shape))
811
+ edge_chunk = arr[edge_slice1].reshape(pad_singleton)
812
+ ref_chunk1 = 2 * edge_chunk - ref_chunk1
813
+ del edge_chunk
814
+
815
+ ##########################################################################
816
+ # Appended region
817
+
818
+ # Slice off a reverse indexed chunk from far edge to pad `arr` after
819
+ start = arr.shape[axis] - pad_amt[1] - 1
820
+ end = arr.shape[axis] - 1
821
+ ref_slice = tuple(slice(None) if i != axis else slice(start, end)
822
+ for (i, x) in enumerate(arr.shape))
823
+ rev_idx = tuple(slice(None) if i != axis else slice(None, None, -1)
824
+ for (i, x) in enumerate(arr.shape))
825
+ ref_chunk2 = arr[ref_slice][rev_idx]
826
+
827
+ if pad_amt[1] == 1:
828
+ ref_chunk2 = ref_chunk2.reshape(pad_singleton)
829
+
830
+ if 'odd' in method:
831
+ edge_slice2 = tuple(slice(None) if i != axis else -1
832
+ for (i, x) in enumerate(arr.shape))
833
+ edge_chunk = arr[edge_slice2].reshape(pad_singleton)
834
+ ref_chunk2 = 2 * edge_chunk - ref_chunk2
835
+ del edge_chunk
836
+
837
+ # Concatenate `arr` with both chunks, extending along `axis`
838
+ return np.concatenate((ref_chunk1, arr, ref_chunk2), axis=axis)
839
+
840
+
841
+ def _pad_sym(arr, pad_amt, method, axis=-1):
842
+ """
843
+ Pad `axis` of `arr` by symmetry.
844
+
845
+ Parameters
846
+ ----------
847
+ arr : ndarray
848
+ Input array of arbitrary shape.
849
+ pad_amt : tuple of ints, length 2
850
+ Padding to (prepend, append) along `axis`.
851
+ method : str
852
+ Controls method of symmetry; options are 'even' or 'odd'.
853
+ axis : int
854
+ Axis along which to pad `arr`.
855
+
856
+ Returns
857
+ -------
858
+ padarr : ndarray
859
+ Output array, with `pad_amt[0]` values prepended and `pad_amt[1]`
860
+ values appended along `axis`. Both regions are padded with symmetric
861
+ values from the original array.
862
+
863
+ Notes
864
+ -----
865
+ This algorithm DOES pad with repetition, i.e. the edges are repeated.
866
+ For padding without repeated edges, use `mode='reflect'`.
867
+
868
+ The modes 'reflect', 'symmetric', and 'wrap' must be padded with a
869
+ single function, lest the indexing tricks in non-integer multiples of the
870
+ original shape would violate repetition in the final iteration.
871
+
872
+ """
873
+ # Implicit booleanness to test for zero (or None) in any scalar type
874
+ if pad_amt[0] == 0 and pad_amt[1] == 0:
875
+ return arr
876
+
877
+ ##########################################################################
878
+ # Prepended region
879
+
880
+ # Slice off a reverse indexed chunk from near edge to pad `arr` before
881
+ sym_slice = tuple(slice(None) if i != axis else slice(0, pad_amt[0])
882
+ for (i, x) in enumerate(arr.shape))
883
+ rev_idx = tuple(slice(None) if i != axis else slice(None, None, -1)
884
+ for (i, x) in enumerate(arr.shape))
885
+ sym_chunk1 = arr[sym_slice][rev_idx]
886
+
887
+ # Shape to restore singleton dimension after slicing
888
+ pad_singleton = tuple(x if i != axis else 1
889
+ for (i, x) in enumerate(arr.shape))
890
+ if pad_amt[0] == 1:
891
+ sym_chunk1 = sym_chunk1.reshape(pad_singleton)
892
+
893
+ # Memory/computationally more expensive, only do this if `method='odd'`
894
+ if 'odd' in method and pad_amt[0] > 0:
895
+ edge_slice1 = tuple(slice(None) if i != axis else 0
896
+ for (i, x) in enumerate(arr.shape))
897
+ edge_chunk = arr[edge_slice1].reshape(pad_singleton)
898
+ sym_chunk1 = 2 * edge_chunk - sym_chunk1
899
+ del edge_chunk
900
+
901
+ ##########################################################################
902
+ # Appended region
903
+
904
+ # Slice off a reverse indexed chunk from far edge to pad `arr` after
905
+ start = arr.shape[axis] - pad_amt[1]
906
+ end = arr.shape[axis]
907
+ sym_slice = tuple(slice(None) if i != axis else slice(start, end)
908
+ for (i, x) in enumerate(arr.shape))
909
+ sym_chunk2 = arr[sym_slice][rev_idx]
910
+
911
+ if pad_amt[1] == 1:
912
+ sym_chunk2 = sym_chunk2.reshape(pad_singleton)
913
+
914
+ if 'odd' in method:
915
+ edge_slice2 = tuple(slice(None) if i != axis else -1
916
+ for (i, x) in enumerate(arr.shape))
917
+ edge_chunk = arr[edge_slice2].reshape(pad_singleton)
918
+ sym_chunk2 = 2 * edge_chunk - sym_chunk2
919
+ del edge_chunk
920
+
921
+ # Concatenate `arr` with both chunks, extending along `axis`
922
+ return np.concatenate((sym_chunk1, arr, sym_chunk2), axis=axis)
923
+
924
+
925
+ def _pad_wrap(arr, pad_amt, axis=-1):
926
+ """
927
+ Pad `axis` of `arr` via wrapping.
928
+
929
+ Parameters
930
+ ----------
931
+ arr : ndarray
932
+ Input array of arbitrary shape.
933
+ pad_amt : tuple of ints, length 2
934
+ Padding to (prepend, append) along `axis`.
935
+ axis : int
936
+ Axis along which to pad `arr`.
937
+
938
+ Returns
939
+ -------
940
+ padarr : ndarray
941
+ Output array, with `pad_amt[0]` values prepended and `pad_amt[1]`
942
+ values appended along `axis`. Both regions are padded wrapped values
943
+ from the opposite end of `axis`.
944
+
945
+ Notes
946
+ -----
947
+ This method of padding is also known as 'tile' or 'tiling'.
948
+
949
+ The modes 'reflect', 'symmetric', and 'wrap' must be padded with a
950
+ single function, lest the indexing tricks in non-integer multiples of the
951
+ original shape would violate repetition in the final iteration.
952
+
953
+ """
954
+ # Implicit booleanness to test for zero (or None) in any scalar type
955
+ if pad_amt[0] == 0 and pad_amt[1] == 0:
956
+ return arr
957
+
958
+ ##########################################################################
959
+ # Prepended region
960
+
961
+ # Slice off a reverse indexed chunk from near edge to pad `arr` before
962
+ start = arr.shape[axis] - pad_amt[0]
963
+ end = arr.shape[axis]
964
+ wrap_slice = tuple(slice(None) if i != axis else slice(start, end)
965
+ for (i, x) in enumerate(arr.shape))
966
+ wrap_chunk1 = arr[wrap_slice]
967
+
968
+ # Shape to restore singleton dimension after slicing
969
+ pad_singleton = tuple(x if i != axis else 1
970
+ for (i, x) in enumerate(arr.shape))
971
+ if pad_amt[0] == 1:
972
+ wrap_chunk1 = wrap_chunk1.reshape(pad_singleton)
973
+
974
+ ##########################################################################
975
+ # Appended region
976
+
977
+ # Slice off a reverse indexed chunk from far edge to pad `arr` after
978
+ wrap_slice = tuple(slice(None) if i != axis else slice(0, pad_amt[1])
979
+ for (i, x) in enumerate(arr.shape))
980
+ wrap_chunk2 = arr[wrap_slice]
981
+
982
+ if pad_amt[1] == 1:
983
+ wrap_chunk2 = wrap_chunk2.reshape(pad_singleton)
984
+
985
+ # Concatenate `arr` with both chunks, extending along `axis`
986
+ return np.concatenate((wrap_chunk1, arr, wrap_chunk2), axis=axis)
987
+
988
+
989
+ def _normalize_shape(ndarray, shape, cast_to_int=True):
990
+ """
991
+ Private function which does some checks and normalizes the possibly
992
+ much simpler representations of 'pad_width', 'stat_length',
993
+ 'constant_values', 'end_values'.
994
+
995
+ Parameters
996
+ ----------
997
+ narray : ndarray
998
+ Input ndarray
999
+ shape : {sequence, array_like, float, int}, optional
1000
+ The width of padding (pad_width), the number of elements on the
1001
+ edge of the narray used for statistics (stat_length), the constant
1002
+ value(s) to use when filling padded regions (constant_values), or the
1003
+ endpoint target(s) for linear ramps (end_values).
1004
+ ((before_1, after_1), ... (before_N, after_N)) unique number of
1005
+ elements for each axis where `N` is rank of `narray`.
1006
+ ((before, after),) yields same before and after constants for each
1007
+ axis.
1008
+ (constant,) or val is a shortcut for before = after = constant for
1009
+ all axes.
1010
+ cast_to_int : bool, optional
1011
+ Controls if values in ``shape`` will be rounded and cast to int
1012
+ before being returned.
1013
+
1014
+ Returns
1015
+ -------
1016
+ normalized_shape : tuple of tuples
1017
+ val => ((val, val), (val, val), ...)
1018
+ [[val1, val2], [val3, val4], ...] => ((val1, val2), (val3, val4), ...)
1019
+ ((val1, val2), (val3, val4), ...) => no change
1020
+ [[val1, val2], ] => ((val1, val2), (val1, val2), ...)
1021
+ ((val1, val2), ) => ((val1, val2), (val1, val2), ...)
1022
+ [[val , ], ] => ((val, val), (val, val), ...)
1023
+ ((val , ), ) => ((val, val), (val, val), ...)
1024
+
1025
+ """
1026
+ ndims = ndarray.ndim
1027
+
1028
+ # Shortcut shape=None
1029
+ if shape is None:
1030
+ return ((None, None), ) * ndims
1031
+
1032
+ # Convert any input `info` to a NumPy array
1033
+ arr = np.asarray(shape)
1034
+
1035
+ # Switch based on what input looks like
1036
+ if arr.ndim <= 1:
1037
+ if arr.shape == () or arr.shape == (1,):
1038
+ # Single scalar input
1039
+ # Create new array of ones, multiply by the scalar
1040
+ arr = np.ones((ndims, 2), dtype=ndarray.dtype) * arr
1041
+ elif arr.shape == (2,):
1042
+ # Apply padding (before, after) each axis
1043
+ # Create new axis 0, repeat along it for every axis
1044
+ arr = arr[np.newaxis, :].repeat(ndims, axis=0)
1045
+ else:
1046
+ fmt = "Unable to create correctly shaped tuple from %s"
1047
+ raise ValueError(fmt % (shape,))
1048
+
1049
+ elif arr.ndim == 2:
1050
+ if arr.shape[1] == 1 and arr.shape[0] == ndims:
1051
+ # Padded before and after by the same amount
1052
+ arr = arr.repeat(2, axis=1)
1053
+ elif arr.shape[0] == ndims:
1054
+ # Input correctly formatted, pass it on as `arr`
1055
+ arr = shape
1056
+ else:
1057
+ fmt = "Unable to create correctly shaped tuple from %s"
1058
+ raise ValueError(fmt % (shape,))
1059
+
1060
+ else:
1061
+ fmt = "Unable to create correctly shaped tuple from %s"
1062
+ raise ValueError(fmt % (shape,))
1063
+
1064
+ # Cast if necessary
1065
+ if cast_to_int is True:
1066
+ arr = np.round(arr).astype(int)
1067
+
1068
+ # Convert list of lists to tuple of tuples
1069
+ return tuple(tuple(axis) for axis in arr.tolist())
1070
+
1071
+
1072
+ def _validate_lengths(narray, number_elements):
1073
+ """
1074
+ Private function which does some checks and reformats pad_width and
1075
+ stat_length using _normalize_shape.
1076
+
1077
+ Parameters
1078
+ ----------
1079
+ narray : ndarray
1080
+ Input ndarray
1081
+ number_elements : {sequence, int}, optional
1082
+ The width of padding (pad_width) or the number of elements on the edge
1083
+ of the narray used for statistics (stat_length).
1084
+ ((before_1, after_1), ... (before_N, after_N)) unique number of
1085
+ elements for each axis.
1086
+ ((before, after),) yields same before and after constants for each
1087
+ axis.
1088
+ (constant,) or int is a shortcut for before = after = constant for all
1089
+ axes.
1090
+
1091
+ Returns
1092
+ -------
1093
+ _validate_lengths : tuple of tuples
1094
+ int => ((int, int), (int, int), ...)
1095
+ [[int1, int2], [int3, int4], ...] => ((int1, int2), (int3, int4), ...)
1096
+ ((int1, int2), (int3, int4), ...) => no change
1097
+ [[int1, int2], ] => ((int1, int2), (int1, int2), ...)
1098
+ ((int1, int2), ) => ((int1, int2), (int1, int2), ...)
1099
+ [[int , ], ] => ((int, int), (int, int), ...)
1100
+ ((int , ), ) => ((int, int), (int, int), ...)
1101
+
1102
+ """
1103
+ normshp = _normalize_shape(narray, number_elements)
1104
+ for i in normshp:
1105
+ chk = [1 if x is None else x for x in i]
1106
+ chk = [1 if x >= 0 else -1 for x in chk]
1107
+ if (chk[0] < 0) or (chk[1] < 0):
1108
+ fmt = "%s cannot contain negative values."
1109
+ raise ValueError(fmt % (number_elements,))
1110
+ return normshp
1111
+
1112
+
1113
+ ###############################################################################
1114
+ # Public functions
1115
+
1116
+
1117
+ def pad(array, pad_width, mode=None, **kwargs):
1118
+ """
1119
+ Pads an array.
1120
+
1121
+ Parameters
1122
+ ----------
1123
+ array : array_like of rank N
1124
+ Input array
1125
+ pad_width : {sequence, array_like, int}
1126
+ Number of values padded to the edges of each axis.
1127
+ ((before_1, after_1), ... (before_N, after_N)) unique pad widths
1128
+ for each axis.
1129
+ ((before, after),) yields same before and after pad for each axis.
1130
+ (pad,) or int is a shortcut for before = after = pad width for all
1131
+ axes.
1132
+ mode : str or function
1133
+ One of the following string values or a user supplied function.
1134
+
1135
+ 'constant'
1136
+ Pads with a constant value.
1137
+ 'edge'
1138
+ Pads with the edge values of array.
1139
+ 'linear_ramp'
1140
+ Pads with the linear ramp between end_value and the
1141
+ array edge value.
1142
+ 'maximum'
1143
+ Pads with the maximum value of all or part of the
1144
+ vector along each axis.
1145
+ 'mean'
1146
+ Pads with the mean value of all or part of the
1147
+ vector along each axis.
1148
+ 'median'
1149
+ Pads with the median value of all or part of the
1150
+ vector along each axis.
1151
+ 'minimum'
1152
+ Pads with the minimum value of all or part of the
1153
+ vector along each axis.
1154
+ 'reflect'
1155
+ Pads with the reflection of the vector mirrored on
1156
+ the first and last values of the vector along each
1157
+ axis.
1158
+ 'symmetric'
1159
+ Pads with the reflection of the vector mirrored
1160
+ along the edge of the array.
1161
+ 'wrap'
1162
+ Pads with the wrap of the vector along the axis.
1163
+ The first values are used to pad the end and the
1164
+ end values are used to pad the beginning.
1165
+ <function>
1166
+ Padding function, see Notes.
1167
+ stat_length : sequence or int, optional
1168
+ Used in 'maximum', 'mean', 'median', and 'minimum'. Number of
1169
+ values at edge of each axis used to calculate the statistic value.
1170
+
1171
+ ((before_1, after_1), ... (before_N, after_N)) unique statistic
1172
+ lengths for each axis.
1173
+
1174
+ ((before, after),) yields same before and after statistic lengths
1175
+ for each axis.
1176
+
1177
+ (stat_length,) or int is a shortcut for before = after = statistic
1178
+ length for all axes.
1179
+
1180
+ Default is ``None``, to use the entire axis.
1181
+ constant_values : sequence or int, optional
1182
+ Used in 'constant'. The values to set the padded values for each
1183
+ axis.
1184
+
1185
+ ((before_1, after_1), ... (before_N, after_N)) unique pad constants
1186
+ for each axis.
1187
+
1188
+ ((before, after),) yields same before and after constants for each
1189
+ axis.
1190
+
1191
+ (constant,) or int is a shortcut for before = after = constant for
1192
+ all axes.
1193
+
1194
+ Default is 0.
1195
+ end_values : sequence or int, optional
1196
+ Used in 'linear_ramp'. The values used for the ending value of the
1197
+ linear_ramp and that will form the edge of the padded array.
1198
+
1199
+ ((before_1, after_1), ... (before_N, after_N)) unique end values
1200
+ for each axis.
1201
+
1202
+ ((before, after),) yields same before and after end values for each
1203
+ axis.
1204
+
1205
+ (constant,) or int is a shortcut for before = after = end value for
1206
+ all axes.
1207
+
1208
+ Default is 0.
1209
+ reflect_type : {'even', 'odd'}, optional
1210
+ Used in 'reflect', and 'symmetric'. The 'even' style is the
1211
+ default with an unaltered reflection around the edge value. For
1212
+ the 'odd' style, the extented part of the array is created by
1213
+ subtracting the reflected values from two times the edge value.
1214
+
1215
+ Returns
1216
+ -------
1217
+ pad : ndarray
1218
+ Padded array of rank equal to `array` with shape increased
1219
+ according to `pad_width`.
1220
+
1221
+ Notes
1222
+ -----
1223
+ .. versionadded:: 1.7.0
1224
+
1225
+ For an array with rank greater than 1, some of the padding of later
1226
+ axes is calculated from padding of previous axes. This is easiest to
1227
+ think about with a rank 2 array where the corners of the padded array
1228
+ are calculated by using padded values from the first axis.
1229
+
1230
+ The padding function, if used, should return a rank 1 array equal in
1231
+ length to the vector argument with padded values replaced. It has the
1232
+ following signature::
1233
+
1234
+ padding_func(vector, iaxis_pad_width, iaxis, **kwargs)
1235
+
1236
+ where
1237
+
1238
+ vector : ndarray
1239
+ A rank 1 array already padded with zeros. Padded values are
1240
+ vector[:pad_tuple[0]] and vector[-pad_tuple[1]:].
1241
+ iaxis_pad_width : tuple
1242
+ A 2-tuple of ints, iaxis_pad_width[0] represents the number of
1243
+ values padded at the beginning of vector where
1244
+ iaxis_pad_width[1] represents the number of values padded at
1245
+ the end of vector.
1246
+ iaxis : int
1247
+ The axis currently being calculated.
1248
+ kwargs : misc
1249
+ Any keyword arguments the function requires.
1250
+
1251
+ Examples
1252
+ --------
1253
+ >>> a = [1, 2, 3, 4, 5]
1254
+ >>> np.lib.pad(a, (2,3), 'constant', constant_values=(4, 6))
1255
+ array([4, 4, 1, 2, 3, 4, 5, 6, 6, 6])
1256
+
1257
+ >>> np.lib.pad(a, (2, 3), 'edge')
1258
+ array([1, 1, 1, 2, 3, 4, 5, 5, 5, 5])
1259
+
1260
+ >>> np.lib.pad(a, (2, 3), 'linear_ramp', end_values=(5, -4))
1261
+ array([ 5, 3, 1, 2, 3, 4, 5, 2, -1, -4])
1262
+
1263
+ >>> np.lib.pad(a, (2,), 'maximum')
1264
+ array([5, 5, 1, 2, 3, 4, 5, 5, 5])
1265
+
1266
+ >>> np.lib.pad(a, (2,), 'mean')
1267
+ array([3, 3, 1, 2, 3, 4, 5, 3, 3])
1268
+
1269
+ >>> np.lib.pad(a, (2,), 'median')
1270
+ array([3, 3, 1, 2, 3, 4, 5, 3, 3])
1271
+
1272
+ >>> a = [[1, 2], [3, 4]]
1273
+ >>> np.lib.pad(a, ((3, 2), (2, 3)), 'minimum')
1274
+ array([[1, 1, 1, 2, 1, 1, 1],
1275
+ [1, 1, 1, 2, 1, 1, 1],
1276
+ [1, 1, 1, 2, 1, 1, 1],
1277
+ [1, 1, 1, 2, 1, 1, 1],
1278
+ [3, 3, 3, 4, 3, 3, 3],
1279
+ [1, 1, 1, 2, 1, 1, 1],
1280
+ [1, 1, 1, 2, 1, 1, 1]])
1281
+
1282
+ >>> a = [1, 2, 3, 4, 5]
1283
+ >>> np.lib.pad(a, (2, 3), 'reflect')
1284
+ array([3, 2, 1, 2, 3, 4, 5, 4, 3, 2])
1285
+
1286
+ >>> np.lib.pad(a, (2, 3), 'reflect', reflect_type='odd')
1287
+ array([-1, 0, 1, 2, 3, 4, 5, 6, 7, 8])
1288
+
1289
+ >>> np.lib.pad(a, (2, 3), 'symmetric')
1290
+ array([2, 1, 1, 2, 3, 4, 5, 5, 4, 3])
1291
+
1292
+ >>> np.lib.pad(a, (2, 3), 'symmetric', reflect_type='odd')
1293
+ array([0, 1, 1, 2, 3, 4, 5, 5, 6, 7])
1294
+
1295
+ >>> np.lib.pad(a, (2, 3), 'wrap')
1296
+ array([4, 5, 1, 2, 3, 4, 5, 1, 2, 3])
1297
+
1298
+ >>> def padwithtens(vector, pad_width, iaxis, kwargs):
1299
+ ... vector[:pad_width[0]] = 10
1300
+ ... vector[-pad_width[1]:] = 10
1301
+ ... return vector
1302
+
1303
+ >>> a = np.arange(6)
1304
+ >>> a = a.reshape((2, 3))
1305
+
1306
+ >>> np.lib.pad(a, 2, padwithtens)
1307
+ array([[10, 10, 10, 10, 10, 10, 10],
1308
+ [10, 10, 10, 10, 10, 10, 10],
1309
+ [10, 10, 0, 1, 2, 10, 10],
1310
+ [10, 10, 3, 4, 5, 10, 10],
1311
+ [10, 10, 10, 10, 10, 10, 10],
1312
+ [10, 10, 10, 10, 10, 10, 10]])
1313
+ """
1314
+ if not np.asarray(pad_width).dtype.kind == 'i':
1315
+ raise TypeError('`pad_width` must be of integral type.')
1316
+
1317
+ narray = np.array(array)
1318
+ pad_width = _validate_lengths(narray, pad_width)
1319
+
1320
+ allowedkwargs = {
1321
+ 'constant': ['constant_values'],
1322
+ 'edge': [],
1323
+ 'linear_ramp': ['end_values'],
1324
+ 'maximum': ['stat_length'],
1325
+ 'mean': ['stat_length'],
1326
+ 'median': ['stat_length'],
1327
+ 'minimum': ['stat_length'],
1328
+ 'reflect': ['reflect_type'],
1329
+ 'symmetric': ['reflect_type'],
1330
+ 'wrap': [],
1331
+ }
1332
+
1333
+ kwdefaults = {
1334
+ 'stat_length': None,
1335
+ 'constant_values': 0,
1336
+ 'end_values': 0,
1337
+ 'reflect_type': 'even',
1338
+ }
1339
+
1340
+ if isinstance(mode, str):
1341
+ # Make sure have allowed kwargs appropriate for mode
1342
+ for key in kwargs:
1343
+ if key not in allowedkwargs[mode]:
1344
+ raise ValueError('%s keyword not in allowed keywords %s' %
1345
+ (key, allowedkwargs[mode]))
1346
+
1347
+ # Set kwarg defaults
1348
+ for kw in allowedkwargs[mode]:
1349
+ kwargs.setdefault(kw, kwdefaults[kw])
1350
+
1351
+ # Need to only normalize particular keywords.
1352
+ for i in kwargs:
1353
+ if i == 'stat_length':
1354
+ kwargs[i] = _validate_lengths(narray, kwargs[i])
1355
+ if i in ['end_values', 'constant_values']:
1356
+ kwargs[i] = _normalize_shape(narray, kwargs[i],
1357
+ cast_to_int=False)
1358
+ elif mode is None:
1359
+ raise ValueError('Keyword "mode" must be a function or one of %s.' %
1360
+ (list(allowedkwargs.keys()),))
1361
+ else:
1362
+ # Drop back to old, slower np.apply_along_axis mode for user-supplied
1363
+ # vector function
1364
+ function = mode
1365
+
1366
+ # Create a new padded array
1367
+ rank = list(range(len(narray.shape)))
1368
+ total_dim_increase = [np.sum(pad_width[i]) for i in rank]
1369
+ offset_slices = [slice(pad_width[i][0],
1370
+ pad_width[i][0] + narray.shape[i])
1371
+ for i in rank]
1372
+ new_shape = np.array(narray.shape) + total_dim_increase
1373
+ newmat = np.zeros(new_shape, narray.dtype)
1374
+
1375
+ # Insert the original array into the padded array
1376
+ newmat[offset_slices] = narray
1377
+
1378
+ # This is the core of pad ...
1379
+ for iaxis in rank:
1380
+ np.apply_along_axis(function,
1381
+ iaxis,
1382
+ newmat,
1383
+ pad_width[iaxis],
1384
+ iaxis,
1385
+ kwargs)
1386
+ return newmat
1387
+
1388
+ # If we get here, use new padding method
1389
+ newmat = narray.copy()
1390
+
1391
+ # API preserved, but completely new algorithm which pads by building the
1392
+ # entire block to pad before/after `arr` with in one step, for each axis.
1393
+ if mode == 'constant':
1394
+ for axis, ((pad_before, pad_after), (before_val, after_val)) \
1395
+ in enumerate(zip(pad_width, kwargs['constant_values'])):
1396
+ newmat = _prepend_const(newmat, pad_before, before_val, axis)
1397
+ newmat = _append_const(newmat, pad_after, after_val, axis)
1398
+
1399
+ elif mode == 'edge':
1400
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1401
+ newmat = _prepend_edge(newmat, pad_before, axis)
1402
+ newmat = _append_edge(newmat, pad_after, axis)
1403
+
1404
+ elif mode == 'linear_ramp':
1405
+ for axis, ((pad_before, pad_after), (before_val, after_val)) \
1406
+ in enumerate(zip(pad_width, kwargs['end_values'])):
1407
+ newmat = _prepend_ramp(newmat, pad_before, before_val, axis)
1408
+ newmat = _append_ramp(newmat, pad_after, after_val, axis)
1409
+
1410
+ elif mode == 'maximum':
1411
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1412
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1413
+ newmat = _prepend_max(newmat, pad_before, chunk_before, axis)
1414
+ newmat = _append_max(newmat, pad_after, chunk_after, axis)
1415
+
1416
+ elif mode == 'mean':
1417
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1418
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1419
+ newmat = _prepend_mean(newmat, pad_before, chunk_before, axis)
1420
+ newmat = _append_mean(newmat, pad_after, chunk_after, axis)
1421
+
1422
+ elif mode == 'median':
1423
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1424
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1425
+ newmat = _prepend_med(newmat, pad_before, chunk_before, axis)
1426
+ newmat = _append_med(newmat, pad_after, chunk_after, axis)
1427
+
1428
+ elif mode == 'minimum':
1429
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1430
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1431
+ newmat = _prepend_min(newmat, pad_before, chunk_before, axis)
1432
+ newmat = _append_min(newmat, pad_after, chunk_after, axis)
1433
+
1434
+ elif mode == 'reflect':
1435
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1436
+ # Recursive padding along any axis where `pad_amt` is too large
1437
+ # for indexing tricks. We can only safely pad the original axis
1438
+ # length, to keep the period of the reflections consistent.
1439
+ if ((pad_before > 0) or
1440
+ (pad_after > 0)) and newmat.shape[axis] == 1:
1441
+ # Extending singleton dimension for 'reflect' is legacy
1442
+ # behavior; it really should raise an error.
1443
+ newmat = _prepend_edge(newmat, pad_before, axis)
1444
+ newmat = _append_edge(newmat, pad_after, axis)
1445
+ continue
1446
+
1447
+ method = kwargs['reflect_type']
1448
+ safe_pad = newmat.shape[axis] - 1
1449
+ while ((pad_before > safe_pad) or (pad_after > safe_pad)):
1450
+ pad_iter_b = min(safe_pad,
1451
+ safe_pad * (pad_before // safe_pad))
1452
+ pad_iter_a = min(safe_pad, safe_pad * (pad_after // safe_pad))
1453
+ newmat = _pad_ref(newmat, (pad_iter_b,
1454
+ pad_iter_a), method, axis)
1455
+ pad_before -= pad_iter_b
1456
+ pad_after -= pad_iter_a
1457
+ safe_pad += pad_iter_b + pad_iter_a
1458
+ newmat = _pad_ref(newmat, (pad_before, pad_after), method, axis)
1459
+
1460
+ elif mode == 'symmetric':
1461
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1462
+ # Recursive padding along any axis where `pad_amt` is too large
1463
+ # for indexing tricks. We can only safely pad the original axis
1464
+ # length, to keep the period of the reflections consistent.
1465
+ method = kwargs['reflect_type']
1466
+ safe_pad = newmat.shape[axis]
1467
+ while ((pad_before > safe_pad) or
1468
+ (pad_after > safe_pad)):
1469
+ pad_iter_b = min(safe_pad,
1470
+ safe_pad * (pad_before // safe_pad))
1471
+ pad_iter_a = min(safe_pad, safe_pad * (pad_after // safe_pad))
1472
+ newmat = _pad_sym(newmat, (pad_iter_b,
1473
+ pad_iter_a), method, axis)
1474
+ pad_before -= pad_iter_b
1475
+ pad_after -= pad_iter_a
1476
+ safe_pad += pad_iter_b + pad_iter_a
1477
+ newmat = _pad_sym(newmat, (pad_before, pad_after), method, axis)
1478
+
1479
+ elif mode == 'wrap':
1480
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1481
+ # Recursive padding along any axis where `pad_amt` is too large
1482
+ # for indexing tricks. We can only safely pad the original axis
1483
+ # length, to keep the period of the reflections consistent.
1484
+ safe_pad = newmat.shape[axis]
1485
+ while ((pad_before > safe_pad) or
1486
+ (pad_after > safe_pad)):
1487
+ pad_iter_b = min(safe_pad,
1488
+ safe_pad * (pad_before // safe_pad))
1489
+ pad_iter_a = min(safe_pad, safe_pad * (pad_after // safe_pad))
1490
+ newmat = _pad_wrap(newmat, (pad_iter_b, pad_iter_a), axis)
1491
+
1492
+ pad_before -= pad_iter_b
1493
+ pad_after -= pad_iter_a
1494
+ safe_pad += pad_iter_b + pad_iter_a
1495
+ newmat = _pad_wrap(newmat, (pad_before, pad_after), axis)
1496
+
1497
+ return newmat