numpy 1.9.2__zip → 1.10.0__zip

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1593) hide show
  1. numpy-1.10.0.post2/INSTALL.txt +200 -0
  2. numpy-1.10.0.post2/LICENSE.txt +30 -0
  3. numpy-1.10.0.post2/MANIFEST.in +31 -0
  4. numpy-1.10.0.post2/PKG-INFO +47 -0
  5. numpy-1.10.0.post2/cnew.txt +117 -0
  6. numpy-1.10.0.post2/cold.txt +44 -0
  7. numpy-1.10.0.post2/committers.txt +160 -0
  8. numpy-1.10.0.post2/cpre.txt +283 -0
  9. numpy-1.10.0.post2/crel.txt +161 -0
  10. numpy-1.10.0.post2/doc/release/1.10.0-notes.rst +439 -0
  11. numpy-1.10.0.post2/doc/scipy-sphinx-theme/.git +1 -0
  12. numpy-1.10.0.post2/doc/source/conf.py +331 -0
  13. numpy-1.10.0.post2/doc/source/dev/development_environment.rst +211 -0
  14. numpy-1.10.0.post2/doc/source/dev/gitwash/development_workflow.rst +534 -0
  15. numpy-1.10.0.post2/doc/source/dev/gitwash/git_links.inc +95 -0
  16. numpy-1.10.0.post2/doc/source/dev/gitwash/index.rst +14 -0
  17. numpy-1.10.0.post2/doc/source/dev/index.rst +11 -0
  18. numpy-1.10.0.post2/doc/source/reference/arrays.classes.rst +490 -0
  19. numpy-1.10.0.post2/doc/source/reference/arrays.dtypes.rst +536 -0
  20. numpy-1.10.0.post2/doc/source/reference/arrays.indexing.rst +549 -0
  21. numpy-1.10.0.post2/doc/source/reference/arrays.interface.rst +337 -0
  22. numpy-1.10.0.post2/doc/source/reference/arrays.ndarray.rst +622 -0
  23. numpy-1.10.0.post2/doc/source/reference/arrays.scalars.rst +291 -0
  24. numpy-1.10.0.post2/doc/source/reference/c-api.array.rst +3393 -0
  25. numpy-1.10.0.post2/doc/source/reference/c-api.config.rst +103 -0
  26. numpy-1.10.0.post2/doc/source/reference/c-api.coremath.rst +420 -0
  27. numpy-1.10.0.post2/doc/source/reference/c-api.dtype.rst +376 -0
  28. numpy-1.10.0.post2/doc/source/reference/c-api.generalized-ufuncs.rst +191 -0
  29. numpy-1.10.0.post2/doc/source/reference/c-api.iterator.rst +1300 -0
  30. numpy-1.10.0.post2/doc/source/reference/c-api.types-and-structures.rst +1240 -0
  31. numpy-1.10.0.post2/doc/source/reference/c-api.ufunc.rst +413 -0
  32. numpy-1.10.0.post2/doc/source/reference/index.rst +43 -0
  33. numpy-1.10.0.post2/doc/source/reference/internals.code-explanations.rst +615 -0
  34. numpy-1.10.0.post2/doc/source/reference/routines.array-manipulation.rst +115 -0
  35. numpy-1.10.0.post2/doc/source/reference/routines.io.rst +78 -0
  36. numpy-1.10.0.post2/doc/source/reference/routines.linalg.rst +91 -0
  37. numpy-1.10.0.post2/doc/source/reference/routines.ma.rst +407 -0
  38. numpy-1.10.0.post2/doc/source/reference/routines.sort.rst +41 -0
  39. numpy-1.10.0.post2/doc/source/reference/routines.statistics.rst +57 -0
  40. numpy-1.10.0.post2/doc/source/reference/swig.interface-file.rst +1066 -0
  41. numpy-1.10.0.post2/doc/source/reference/swig.testing.rst +167 -0
  42. numpy-1.10.0.post2/doc/source/reference/ufuncs.rst +666 -0
  43. numpy-1.10.0.post2/doc/source/release.rst +20 -0
  44. numpy-1.10.0.post2/doc/source/user/basics.io.genfromtxt.rst +531 -0
  45. numpy-1.10.0.post2/doc/source/user/basics.rec.rst +7 -0
  46. numpy-1.10.0.post2/doc/source/user/c-info.beyond-basics.rst +560 -0
  47. numpy-1.10.0.post2/doc/source/user/c-info.how-to-extend.rst +642 -0
  48. numpy-1.10.0.post2/doc/source/user/c-info.python-as-glue.rst +1177 -0
  49. numpy-1.10.0.post2/doc/source/user/c-info.ufunc-tutorial.rst +1211 -0
  50. numpy-1.10.0.post2/doc/source/user/install.rst +194 -0
  51. numpy-1.10.0.post2/doc/sphinxext/.git +1 -0
  52. numpy-1.10.0.post2/numpy/__init__.py +227 -0
  53. numpy-1.10.0.post2/numpy/_build_utils/README +8 -0
  54. numpy-1.10.0.post2/numpy/_build_utils/apple_accelerate.py +21 -0
  55. numpy-1.10.0.post2/numpy/_build_utils/common.py +138 -0
  56. numpy-1.10.0.post2/numpy/_build_utils/src/apple_sgemv_fix.c +227 -0
  57. numpy-1.10.0.post2/numpy/_build_utils/waf.py +531 -0
  58. numpy-1.10.0.post2/numpy/_import_tools.py +353 -0
  59. numpy-1.10.0.post2/numpy/add_newdocs.py +7611 -0
  60. numpy-1.10.0.post2/numpy/compat/_inspect.py +194 -0
  61. numpy-1.10.0.post2/numpy/compat/py3k.py +88 -0
  62. numpy-1.10.0.post2/numpy/compat/setup.py +12 -0
  63. numpy-1.10.0.post2/numpy/core/__init__.py +89 -0
  64. numpy-1.10.0.post2/numpy/core/_internal.py +761 -0
  65. numpy-1.10.0.post2/numpy/core/_methods.py +133 -0
  66. numpy-1.10.0.post2/numpy/core/arrayprint.py +760 -0
  67. numpy-1.10.0.post2/numpy/core/code_generators/cversions.txt +34 -0
  68. numpy-1.10.0.post2/numpy/core/code_generators/generate_ufunc_api.py +219 -0
  69. numpy-1.10.0.post2/numpy/core/code_generators/generate_umath.py +1017 -0
  70. numpy-1.10.0.post2/numpy/core/code_generators/numpy_api.py +415 -0
  71. numpy-1.10.0.post2/numpy/core/code_generators/ufunc_docstrings.py +3442 -0
  72. numpy-1.10.0.post2/numpy/core/defchararray.py +2689 -0
  73. numpy-1.10.0.post2/numpy/core/fromnumeric.py +3089 -0
  74. numpy-1.10.0.post2/numpy/core/function_base.py +203 -0
  75. numpy-1.10.0.post2/numpy/core/getlimits.py +308 -0
  76. numpy-1.10.0.post2/numpy/core/include/numpy/ndarrayobject.h +246 -0
  77. numpy-1.10.0.post2/numpy/core/include/numpy/ndarraytypes.h +1797 -0
  78. numpy-1.10.0.post2/numpy/core/include/numpy/npy_3kcompat.h +448 -0
  79. numpy-1.10.0.post2/numpy/core/include/numpy/npy_common.h +1051 -0
  80. numpy-1.10.0.post2/numpy/core/include/numpy/npy_cpu.h +92 -0
  81. numpy-1.10.0.post2/numpy/core/include/numpy/npy_endian.h +61 -0
  82. numpy-1.10.0.post2/numpy/core/include/numpy/npy_math.h +525 -0
  83. numpy-1.10.0.post2/numpy/core/include/numpy/numpyconfig.h +36 -0
  84. numpy-1.10.0.post2/numpy/core/machar.py +342 -0
  85. numpy-1.10.0.post2/numpy/core/memmap.py +311 -0
  86. numpy-1.10.0.post2/numpy/core/numeric.py +2893 -0
  87. numpy-1.10.0.post2/numpy/core/numerictypes.py +1036 -0
  88. numpy-1.10.0.post2/numpy/core/records.py +846 -0
  89. numpy-1.10.0.post2/numpy/core/setup.py +983 -0
  90. numpy-1.10.0.post2/numpy/core/setup_common.py +352 -0
  91. numpy-1.10.0.post2/numpy/core/shape_base.py +350 -0
  92. numpy-1.10.0.post2/numpy/core/src/multiarray/alloc.c +244 -0
  93. numpy-1.10.0.post2/numpy/core/src/multiarray/arrayobject.c +1858 -0
  94. numpy-1.10.0.post2/numpy/core/src/multiarray/arraytypes.c.src +4738 -0
  95. numpy-1.10.0.post2/numpy/core/src/multiarray/arraytypes.h +37 -0
  96. numpy-1.10.0.post2/numpy/core/src/multiarray/buffer.c +981 -0
  97. numpy-1.10.0.post2/numpy/core/src/multiarray/calculation.c +1224 -0
  98. numpy-1.10.0.post2/numpy/core/src/multiarray/cblasfuncs.c +812 -0
  99. numpy-1.10.0.post2/numpy/core/src/multiarray/cblasfuncs.h +10 -0
  100. numpy-1.10.0.post2/numpy/core/src/multiarray/common.c +911 -0
  101. numpy-1.10.0.post2/numpy/core/src/multiarray/common.h +250 -0
  102. numpy-1.10.0.post2/numpy/core/src/multiarray/compiled_base.c +1664 -0
  103. numpy-1.10.0.post2/numpy/core/src/multiarray/compiled_base.h +24 -0
  104. numpy-1.10.0.post2/numpy/core/src/multiarray/conversion_utils.c +1217 -0
  105. numpy-1.10.0.post2/numpy/core/src/multiarray/convert.c +590 -0
  106. numpy-1.10.0.post2/numpy/core/src/multiarray/convert_datatype.c +2155 -0
  107. numpy-1.10.0.post2/numpy/core/src/multiarray/ctors.c +3838 -0
  108. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime.c +3821 -0
  109. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_busday.c +1322 -0
  110. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_busdaycal.c +552 -0
  111. numpy-1.10.0.post2/numpy/core/src/multiarray/datetime_strings.c +1772 -0
  112. numpy-1.10.0.post2/numpy/core/src/multiarray/descriptor.c +3719 -0
  113. numpy-1.10.0.post2/numpy/core/src/multiarray/dtype_transfer.c +4239 -0
  114. numpy-1.10.0.post2/numpy/core/src/multiarray/einsum.c.src +3005 -0
  115. numpy-1.10.0.post2/numpy/core/src/multiarray/getset.c +986 -0
  116. numpy-1.10.0.post2/numpy/core/src/multiarray/hashdescr.c +318 -0
  117. numpy-1.10.0.post2/numpy/core/src/multiarray/item_selection.c +2413 -0
  118. numpy-1.10.0.post2/numpy/core/src/multiarray/iterators.c +2192 -0
  119. numpy-1.10.0.post2/numpy/core/src/multiarray/lowlevel_strided_loops.c.src +1769 -0
  120. numpy-1.10.0.post2/numpy/core/src/multiarray/mapping.c +3380 -0
  121. numpy-1.10.0.post2/numpy/core/src/multiarray/mapping.h +77 -0
  122. numpy-1.10.0.post2/numpy/core/src/multiarray/methods.c +2514 -0
  123. numpy-1.10.0.post2/numpy/core/src/multiarray/multiarray_tests.c.src +1035 -0
  124. numpy-1.10.0.post2/numpy/core/src/multiarray/multiarraymodule.c +4628 -0
  125. numpy-1.10.0.post2/numpy/core/src/multiarray/multiarraymodule.h +15 -0
  126. numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_api.c +2809 -0
  127. numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_constr.c +3160 -0
  128. numpy-1.10.0.post2/numpy/core/src/multiarray/nditer_pywrap.c +2499 -0
  129. numpy-1.10.0.post2/numpy/core/src/multiarray/number.c +1106 -0
  130. numpy-1.10.0.post2/numpy/core/src/multiarray/number.h +77 -0
  131. numpy-1.10.0.post2/numpy/core/src/multiarray/numpymemoryview.c +308 -0
  132. numpy-1.10.0.post2/numpy/core/src/multiarray/numpyos.c +683 -0
  133. numpy-1.10.0.post2/numpy/core/src/multiarray/scalarapi.c +870 -0
  134. numpy-1.10.0.post2/numpy/core/src/multiarray/scalartypes.c.src +4343 -0
  135. numpy-1.10.0.post2/numpy/core/src/multiarray/scalartypes.h +55 -0
  136. numpy-1.10.0.post2/numpy/core/src/multiarray/shape.c +1131 -0
  137. numpy-1.10.0.post2/numpy/core/src/multiarray/ucsnarrow.c +174 -0
  138. numpy-1.10.0.post2/numpy/core/src/multiarray/vdot.c +180 -0
  139. numpy-1.10.0.post2/numpy/core/src/multiarray/vdot.h +18 -0
  140. numpy-1.10.0.post2/numpy/core/src/npymath/ieee754.c.src +808 -0
  141. numpy-1.10.0.post2/numpy/core/src/npymath/npy_math.c.src +597 -0
  142. numpy-1.10.0.post2/numpy/core/src/npymath/npy_math_complex.c.src +1788 -0
  143. numpy-1.10.0.post2/numpy/core/src/npymath/npy_math_private.h +544 -0
  144. numpy-1.10.0.post2/numpy/core/src/npysort/heapsort.c.src +402 -0
  145. numpy-1.10.0.post2/numpy/core/src/npysort/mergesort.c.src +488 -0
  146. numpy-1.10.0.post2/numpy/core/src/npysort/npysort_common.h +360 -0
  147. numpy-1.10.0.post2/numpy/core/src/npysort/quicksort.c.src +523 -0
  148. numpy-1.10.0.post2/numpy/core/src/npysort/selection.c.src +426 -0
  149. numpy-1.10.0.post2/numpy/core/src/private/npy_cblas.h +584 -0
  150. numpy-1.10.0.post2/numpy/core/src/private/npy_config.h +101 -0
  151. numpy-1.10.0.post2/numpy/core/src/private/npy_import.h +32 -0
  152. numpy-1.10.0.post2/numpy/core/src/private/npy_partition.h.src +122 -0
  153. numpy-1.10.0.post2/numpy/core/src/private/npy_sort.h +196 -0
  154. numpy-1.10.0.post2/numpy/core/src/private/templ_common.h.src +43 -0
  155. numpy-1.10.0.post2/numpy/core/src/private/ufunc_override.h +397 -0
  156. numpy-1.10.0.post2/numpy/core/src/umath/funcs.inc.src +356 -0
  157. numpy-1.10.0.post2/numpy/core/src/umath/loops.c.src +2675 -0
  158. numpy-1.10.0.post2/numpy/core/src/umath/loops.h.src +497 -0
  159. numpy-1.10.0.post2/numpy/core/src/umath/operand_flag_tests.c.src +105 -0
  160. numpy-1.10.0.post2/numpy/core/src/umath/scalarmath.c.src +1738 -0
  161. numpy-1.10.0.post2/numpy/core/src/umath/simd.inc.src +903 -0
  162. numpy-1.10.0.post2/numpy/core/src/umath/test_rational.c.src +1404 -0
  163. numpy-1.10.0.post2/numpy/core/src/umath/ufunc_object.c +5703 -0
  164. numpy-1.10.0.post2/numpy/core/src/umath/ufunc_type_resolution.c +2159 -0
  165. numpy-1.10.0.post2/numpy/core/src/umath/umath_tests.c.src +392 -0
  166. numpy-1.10.0.post2/numpy/core/src/umath/umathmodule.c +443 -0
  167. numpy-1.10.0.post2/numpy/core/tests/test_abc.py +47 -0
  168. numpy-1.10.0.post2/numpy/core/tests/test_api.py +515 -0
  169. numpy-1.10.0.post2/numpy/core/tests/test_arrayprint.py +171 -0
  170. numpy-1.10.0.post2/numpy/core/tests/test_datetime.py +1820 -0
  171. numpy-1.10.0.post2/numpy/core/tests/test_defchararray.py +703 -0
  172. numpy-1.10.0.post2/numpy/core/tests/test_deprecations.py +619 -0
  173. numpy-1.10.0.post2/numpy/core/tests/test_dtype.py +578 -0
  174. numpy-1.10.0.post2/numpy/core/tests/test_einsum.py +627 -0
  175. numpy-1.10.0.post2/numpy/core/tests/test_errstate.py +52 -0
  176. numpy-1.10.0.post2/numpy/core/tests/test_function_base.py +142 -0
  177. numpy-1.10.0.post2/numpy/core/tests/test_getlimits.py +77 -0
  178. numpy-1.10.0.post2/numpy/core/tests/test_half.py +436 -0
  179. numpy-1.10.0.post2/numpy/core/tests/test_indexerrors.py +126 -0
  180. numpy-1.10.0.post2/numpy/core/tests/test_indexing.py +1047 -0
  181. numpy-1.10.0.post2/numpy/core/tests/test_item_selection.py +73 -0
  182. numpy-1.10.0.post2/numpy/core/tests/test_machar.py +29 -0
  183. numpy-1.10.0.post2/numpy/core/tests/test_memmap.py +130 -0
  184. numpy-1.10.0.post2/numpy/core/tests/test_multiarray.py +5924 -0
  185. numpy-1.10.0.post2/numpy/core/tests/test_multiarray_assignment.py +84 -0
  186. numpy-1.10.0.post2/numpy/core/tests/test_nditer.py +2638 -0
  187. numpy-1.10.0.post2/numpy/core/tests/test_numeric.py +2204 -0
  188. numpy-1.10.0.post2/numpy/core/tests/test_numerictypes.py +382 -0
  189. numpy-1.10.0.post2/numpy/core/tests/test_print.py +248 -0
  190. numpy-1.10.0.post2/numpy/core/tests/test_records.py +299 -0
  191. numpy-1.10.0.post2/numpy/core/tests/test_regression.py +2177 -0
  192. numpy-1.10.0.post2/numpy/core/tests/test_scalarinherit.py +41 -0
  193. numpy-1.10.0.post2/numpy/core/tests/test_scalarmath.py +316 -0
  194. numpy-1.10.0.post2/numpy/core/tests/test_shape_base.py +319 -0
  195. numpy-1.10.0.post2/numpy/core/tests/test_ufunc.py +1227 -0
  196. numpy-1.10.0.post2/numpy/core/tests/test_umath.py +1933 -0
  197. numpy-1.10.0.post2/numpy/core/tests/test_umath_complex.py +538 -0
  198. numpy-1.10.0.post2/numpy/core/tests/test_unicode.py +360 -0
  199. numpy-1.10.0.post2/numpy/distutils/__init__.py +23 -0
  200. numpy-1.10.0.post2/numpy/distutils/ccompiler.py +690 -0
  201. numpy-1.10.0.post2/numpy/distutils/command/autodist.py +94 -0
  202. numpy-1.10.0.post2/numpy/distutils/command/build.py +47 -0
  203. numpy-1.10.0.post2/numpy/distutils/command/build_clib.py +295 -0
  204. numpy-1.10.0.post2/numpy/distutils/command/build_ext.py +522 -0
  205. numpy-1.10.0.post2/numpy/distutils/command/config.py +437 -0
  206. numpy-1.10.0.post2/numpy/distutils/exec_command.py +651 -0
  207. numpy-1.10.0.post2/numpy/distutils/fcompiler/compaq.py +128 -0
  208. numpy-1.10.0.post2/numpy/distutils/fcompiler/gnu.py +403 -0
  209. numpy-1.10.0.post2/numpy/distutils/fcompiler/intel.py +217 -0
  210. numpy-1.10.0.post2/numpy/distutils/fcompiler/pg.py +63 -0
  211. numpy-1.10.0.post2/numpy/distutils/fcompiler/sun.py +55 -0
  212. numpy-1.10.0.post2/numpy/distutils/intelccompiler.py +95 -0
  213. numpy-1.10.0.post2/numpy/distutils/lib2def.py +116 -0
  214. numpy-1.10.0.post2/numpy/distutils/mingw32ccompiler.py +599 -0
  215. numpy-1.10.0.post2/numpy/distutils/misc_util.py +2306 -0
  216. numpy-1.10.0.post2/numpy/distutils/msvc9compiler.py +23 -0
  217. numpy-1.10.0.post2/numpy/distutils/msvccompiler.py +17 -0
  218. numpy-1.10.0.post2/numpy/distutils/npy_pkg_config.py +451 -0
  219. numpy-1.10.0.post2/numpy/distutils/system_info.py +2397 -0
  220. numpy-1.10.0.post2/numpy/distutils/tests/f2py_ext/tests/test_fib2.py +12 -0
  221. numpy-1.10.0.post2/numpy/distutils/tests/f2py_f90_ext/tests/test_foo.py +11 -0
  222. numpy-1.10.0.post2/numpy/distutils/tests/gen_ext/tests/test_fib3.py +11 -0
  223. numpy-1.10.0.post2/numpy/distutils/tests/pyrex_ext/tests/test_primes.py +13 -0
  224. numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/__init__.py +1 -0
  225. numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/tests/test_example.py +17 -0
  226. numpy-1.10.0.post2/numpy/distutils/tests/swig_ext/tests/test_example2.py +15 -0
  227. numpy-1.10.0.post2/numpy/distutils/tests/test_fcompiler_gnu.py +60 -0
  228. numpy-1.10.0.post2/numpy/distutils/tests/test_fcompiler_intel.py +36 -0
  229. numpy-1.10.0.post2/numpy/distutils/tests/test_misc_util.py +79 -0
  230. numpy-1.10.0.post2/numpy/distutils/tests/test_npy_pkg_config.py +102 -0
  231. numpy-1.10.0.post2/numpy/distutils/tests/test_system_info.py +209 -0
  232. numpy-1.10.0.post2/numpy/distutils/unixccompiler.py +125 -0
  233. numpy-1.10.0.post2/numpy/doc/byteswapping.py +156 -0
  234. numpy-1.10.0.post2/numpy/doc/creation.py +144 -0
  235. numpy-1.10.0.post2/numpy/doc/glossary.py +423 -0
  236. numpy-1.10.0.post2/numpy/doc/indexing.py +439 -0
  237. numpy-1.10.0.post2/numpy/doc/structured_arrays.py +290 -0
  238. numpy-1.10.0.post2/numpy/f2py/__init__.py +49 -0
  239. numpy-1.10.0.post2/numpy/f2py/__main__.py +25 -0
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  1558. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/info.py +0 -0
  1559. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/Python.pxi +0 -0
  1560. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/distributions.h +0 -0
  1561. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/generate_mtrand_c.py +0 -0
  1562. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/initarray.c +0 -0
  1563. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/initarray.h +0 -0
  1564. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/mtrand_py_helper.h +0 -0
  1565. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/numpy.pxd +0 -0
  1566. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/randomkit.c +0 -0
  1567. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/random/mtrand/randomkit.h +0 -0
  1568. {numpy-1.9.2 → numpy-1.10.0.post2}/numpy/testing/tests/test_doctesting.py +0 -0
  1569. {numpy-1.9.2 → numpy-1.10.0.post2}/setupegg.py +0 -0
  1570. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/Makefile +0 -0
  1571. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/pyfragments.swg +0 -0
  1572. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Array1.cxx +0 -0
  1573. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Array1.h +0 -0
  1574. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Array2.cxx +0 -0
  1575. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Array2.h +0 -0
  1576. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Farray.cxx +0 -0
  1577. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Farray.h +0 -0
  1578. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Farray.i +0 -0
  1579. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Fortran.cxx +0 -0
  1580. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Fortran.h +0 -0
  1581. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Fortran.i +0 -0
  1582. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Matrix.cxx +0 -0
  1583. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Matrix.h +0 -0
  1584. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Matrix.i +0 -0
  1585. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/SuperTensor.cxx +0 -0
  1586. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/SuperTensor.h +0 -0
  1587. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/SuperTensor.i +0 -0
  1588. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Tensor.cxx +0 -0
  1589. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Tensor.h +0 -0
  1590. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Tensor.i +0 -0
  1591. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Vector.cxx +0 -0
  1592. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Vector.h +0 -0
  1593. {numpy-1.9.2 → numpy-1.10.0.post2}/tools/swig/test/Vector.i +0 -0
@@ -0,0 +1,1497 @@
1
+ """
2
+ The arraypad module contains a group of functions to pad values onto the edges
3
+ of an n-dimensional array.
4
+
5
+ """
6
+ from __future__ import division, absolute_import, print_function
7
+
8
+ import numpy as np
9
+
10
+
11
+ __all__ = ['pad']
12
+
13
+
14
+ ###############################################################################
15
+ # Private utility functions.
16
+
17
+
18
+ def _arange_ndarray(arr, shape, axis, reverse=False):
19
+ """
20
+ Create an ndarray of `shape` with increments along specified `axis`
21
+
22
+ Parameters
23
+ ----------
24
+ arr : ndarray
25
+ Input array of arbitrary shape.
26
+ shape : tuple of ints
27
+ Shape of desired array. Should be equivalent to `arr.shape` except
28
+ `shape[axis]` which may have any positive value.
29
+ axis : int
30
+ Axis to increment along.
31
+ reverse : bool
32
+ If False, increment in a positive fashion from 1 to `shape[axis]`,
33
+ inclusive. If True, the bounds are the same but the order reversed.
34
+
35
+ Returns
36
+ -------
37
+ padarr : ndarray
38
+ Output array sized to pad `arr` along `axis`, with linear range from
39
+ 1 to `shape[axis]` along specified `axis`.
40
+
41
+ Notes
42
+ -----
43
+ The range is deliberately 1-indexed for this specific use case. Think of
44
+ this algorithm as broadcasting `np.arange` to a single `axis` of an
45
+ arbitrarily shaped ndarray.
46
+
47
+ """
48
+ initshape = tuple(1 if i != axis else shape[axis]
49
+ for (i, x) in enumerate(arr.shape))
50
+ if not reverse:
51
+ padarr = np.arange(1, shape[axis] + 1)
52
+ else:
53
+ padarr = np.arange(shape[axis], 0, -1)
54
+ padarr = padarr.reshape(initshape)
55
+ for i, dim in enumerate(shape):
56
+ if padarr.shape[i] != dim:
57
+ padarr = padarr.repeat(dim, axis=i)
58
+ return padarr
59
+
60
+
61
+ def _round_ifneeded(arr, dtype):
62
+ """
63
+ Rounds arr inplace if destination dtype is integer.
64
+
65
+ Parameters
66
+ ----------
67
+ arr : ndarray
68
+ Input array.
69
+ dtype : dtype
70
+ The dtype of the destination array.
71
+
72
+ """
73
+ if np.issubdtype(dtype, np.integer):
74
+ arr.round(out=arr)
75
+
76
+
77
+ def _prepend_const(arr, pad_amt, val, axis=-1):
78
+ """
79
+ Prepend constant `val` along `axis` of `arr`.
80
+
81
+ Parameters
82
+ ----------
83
+ arr : ndarray
84
+ Input array of arbitrary shape.
85
+ pad_amt : int
86
+ Amount of padding to prepend.
87
+ val : scalar
88
+ Constant value to use. For best results should be of type `arr.dtype`;
89
+ if not `arr.dtype` will be cast to `arr.dtype`.
90
+ axis : int
91
+ Axis along which to pad `arr`.
92
+
93
+ Returns
94
+ -------
95
+ padarr : ndarray
96
+ Output array, with `pad_amt` constant `val` prepended along `axis`.
97
+
98
+ """
99
+ if pad_amt == 0:
100
+ return arr
101
+ padshape = tuple(x if i != axis else pad_amt
102
+ for (i, x) in enumerate(arr.shape))
103
+ if val == 0:
104
+ return np.concatenate((np.zeros(padshape, dtype=arr.dtype), arr),
105
+ axis=axis)
106
+ else:
107
+ return np.concatenate(((np.zeros(padshape) + val).astype(arr.dtype),
108
+ arr), axis=axis)
109
+
110
+
111
+ def _append_const(arr, pad_amt, val, axis=-1):
112
+ """
113
+ Append constant `val` along `axis` of `arr`.
114
+
115
+ Parameters
116
+ ----------
117
+ arr : ndarray
118
+ Input array of arbitrary shape.
119
+ pad_amt : int
120
+ Amount of padding to append.
121
+ val : scalar
122
+ Constant value to use. For best results should be of type `arr.dtype`;
123
+ if not `arr.dtype` will be cast to `arr.dtype`.
124
+ axis : int
125
+ Axis along which to pad `arr`.
126
+
127
+ Returns
128
+ -------
129
+ padarr : ndarray
130
+ Output array, with `pad_amt` constant `val` appended along `axis`.
131
+
132
+ """
133
+ if pad_amt == 0:
134
+ return arr
135
+ padshape = tuple(x if i != axis else pad_amt
136
+ for (i, x) in enumerate(arr.shape))
137
+ if val == 0:
138
+ return np.concatenate((arr, np.zeros(padshape, dtype=arr.dtype)),
139
+ axis=axis)
140
+ else:
141
+ return np.concatenate(
142
+ (arr, (np.zeros(padshape) + val).astype(arr.dtype)), axis=axis)
143
+
144
+
145
+ def _prepend_edge(arr, pad_amt, axis=-1):
146
+ """
147
+ Prepend `pad_amt` to `arr` along `axis` by extending edge values.
148
+
149
+ Parameters
150
+ ----------
151
+ arr : ndarray
152
+ Input array of arbitrary shape.
153
+ pad_amt : int
154
+ Amount of padding to prepend.
155
+ axis : int
156
+ Axis along which to pad `arr`.
157
+
158
+ Returns
159
+ -------
160
+ padarr : ndarray
161
+ Output array, extended by `pad_amt` edge values appended along `axis`.
162
+
163
+ """
164
+ if pad_amt == 0:
165
+ return arr
166
+
167
+ edge_slice = tuple(slice(None) if i != axis else 0
168
+ for (i, x) in enumerate(arr.shape))
169
+
170
+ # Shape to restore singleton dimension after slicing
171
+ pad_singleton = tuple(x if i != axis else 1
172
+ for (i, x) in enumerate(arr.shape))
173
+ edge_arr = arr[edge_slice].reshape(pad_singleton)
174
+ return np.concatenate((edge_arr.repeat(pad_amt, axis=axis), arr),
175
+ axis=axis)
176
+
177
+
178
+ def _append_edge(arr, pad_amt, axis=-1):
179
+ """
180
+ Append `pad_amt` to `arr` along `axis` by extending edge values.
181
+
182
+ Parameters
183
+ ----------
184
+ arr : ndarray
185
+ Input array of arbitrary shape.
186
+ pad_amt : int
187
+ Amount of padding to append.
188
+ axis : int
189
+ Axis along which to pad `arr`.
190
+
191
+ Returns
192
+ -------
193
+ padarr : ndarray
194
+ Output array, extended by `pad_amt` edge values prepended along
195
+ `axis`.
196
+
197
+ """
198
+ if pad_amt == 0:
199
+ return arr
200
+
201
+ edge_slice = tuple(slice(None) if i != axis else arr.shape[axis] - 1
202
+ for (i, x) in enumerate(arr.shape))
203
+
204
+ # Shape to restore singleton dimension after slicing
205
+ pad_singleton = tuple(x if i != axis else 1
206
+ for (i, x) in enumerate(arr.shape))
207
+ edge_arr = arr[edge_slice].reshape(pad_singleton)
208
+ return np.concatenate((arr, edge_arr.repeat(pad_amt, axis=axis)),
209
+ axis=axis)
210
+
211
+
212
+ def _prepend_ramp(arr, pad_amt, end, axis=-1):
213
+ """
214
+ Prepend linear ramp along `axis`.
215
+
216
+ Parameters
217
+ ----------
218
+ arr : ndarray
219
+ Input array of arbitrary shape.
220
+ pad_amt : int
221
+ Amount of padding to prepend.
222
+ end : scalar
223
+ Constal value to use. For best results should be of type `arr.dtype`;
224
+ if not `arr.dtype` will be cast to `arr.dtype`.
225
+ axis : int
226
+ Axis along which to pad `arr`.
227
+
228
+ Returns
229
+ -------
230
+ padarr : ndarray
231
+ Output array, with `pad_amt` values prepended along `axis`. The
232
+ prepended region ramps linearly from the edge value to `end`.
233
+
234
+ """
235
+ if pad_amt == 0:
236
+ return arr
237
+
238
+ # Generate shape for final concatenated array
239
+ padshape = tuple(x if i != axis else pad_amt
240
+ for (i, x) in enumerate(arr.shape))
241
+
242
+ # Generate an n-dimensional array incrementing along `axis`
243
+ ramp_arr = _arange_ndarray(arr, padshape, axis,
244
+ reverse=True).astype(np.float64)
245
+
246
+ # Appropriate slicing to extract n-dimensional edge along `axis`
247
+ edge_slice = tuple(slice(None) if i != axis else 0
248
+ for (i, x) in enumerate(arr.shape))
249
+
250
+ # Shape to restore singleton dimension after slicing
251
+ pad_singleton = tuple(x if i != axis else 1
252
+ for (i, x) in enumerate(arr.shape))
253
+
254
+ # Extract edge, reshape to original rank, and extend along `axis`
255
+ edge_pad = arr[edge_slice].reshape(pad_singleton).repeat(pad_amt, axis)
256
+
257
+ # Linear ramp
258
+ slope = (end - edge_pad) / float(pad_amt)
259
+ ramp_arr = ramp_arr * slope
260
+ ramp_arr += edge_pad
261
+ _round_ifneeded(ramp_arr, arr.dtype)
262
+
263
+ # Ramp values will most likely be float, cast them to the same type as arr
264
+ return np.concatenate((ramp_arr.astype(arr.dtype), arr), axis=axis)
265
+
266
+
267
+ def _append_ramp(arr, pad_amt, end, axis=-1):
268
+ """
269
+ Append linear ramp along `axis`.
270
+
271
+ Parameters
272
+ ----------
273
+ arr : ndarray
274
+ Input array of arbitrary shape.
275
+ pad_amt : int
276
+ Amount of padding to append.
277
+ end : scalar
278
+ Constal value to use. For best results should be of type `arr.dtype`;
279
+ if not `arr.dtype` will be cast to `arr.dtype`.
280
+ axis : int
281
+ Axis along which to pad `arr`.
282
+
283
+ Returns
284
+ -------
285
+ padarr : ndarray
286
+ Output array, with `pad_amt` values appended along `axis`. The
287
+ appended region ramps linearly from the edge value to `end`.
288
+
289
+ """
290
+ if pad_amt == 0:
291
+ return arr
292
+
293
+ # Generate shape for final concatenated array
294
+ padshape = tuple(x if i != axis else pad_amt
295
+ for (i, x) in enumerate(arr.shape))
296
+
297
+ # Generate an n-dimensional array incrementing along `axis`
298
+ ramp_arr = _arange_ndarray(arr, padshape, axis,
299
+ reverse=False).astype(np.float64)
300
+
301
+ # Slice a chunk from the edge to calculate stats on
302
+ edge_slice = tuple(slice(None) if i != axis else -1
303
+ for (i, x) in enumerate(arr.shape))
304
+
305
+ # Shape to restore singleton dimension after slicing
306
+ pad_singleton = tuple(x if i != axis else 1
307
+ for (i, x) in enumerate(arr.shape))
308
+
309
+ # Extract edge, reshape to original rank, and extend along `axis`
310
+ edge_pad = arr[edge_slice].reshape(pad_singleton).repeat(pad_amt, axis)
311
+
312
+ # Linear ramp
313
+ slope = (end - edge_pad) / float(pad_amt)
314
+ ramp_arr = ramp_arr * slope
315
+ ramp_arr += edge_pad
316
+ _round_ifneeded(ramp_arr, arr.dtype)
317
+
318
+ # Ramp values will most likely be float, cast them to the same type as arr
319
+ return np.concatenate((arr, ramp_arr.astype(arr.dtype)), axis=axis)
320
+
321
+
322
+ def _prepend_max(arr, pad_amt, num, axis=-1):
323
+ """
324
+ Prepend `pad_amt` maximum values along `axis`.
325
+
326
+ Parameters
327
+ ----------
328
+ arr : ndarray
329
+ Input array of arbitrary shape.
330
+ pad_amt : int
331
+ Amount of padding to prepend.
332
+ num : int
333
+ Depth into `arr` along `axis` to calculate maximum.
334
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
335
+ axis : int
336
+ Axis along which to pad `arr`.
337
+
338
+ Returns
339
+ -------
340
+ padarr : ndarray
341
+ Output array, with `pad_amt` values appended along `axis`. The
342
+ prepended region is the maximum of the first `num` values along
343
+ `axis`.
344
+
345
+ """
346
+ if pad_amt == 0:
347
+ return arr
348
+
349
+ # Equivalent to edge padding for single value, so do that instead
350
+ if num == 1:
351
+ return _prepend_edge(arr, pad_amt, axis)
352
+
353
+ # Use entire array if `num` is too large
354
+ if num is not None:
355
+ if num >= arr.shape[axis]:
356
+ num = None
357
+
358
+ # Slice a chunk from the edge to calculate stats on
359
+ max_slice = tuple(slice(None) if i != axis else slice(num)
360
+ for (i, x) in enumerate(arr.shape))
361
+
362
+ # Shape to restore singleton dimension after slicing
363
+ pad_singleton = tuple(x if i != axis else 1
364
+ for (i, x) in enumerate(arr.shape))
365
+
366
+ # Extract slice, calculate max, reshape to add singleton dimension back
367
+ max_chunk = arr[max_slice].max(axis=axis).reshape(pad_singleton)
368
+
369
+ # Concatenate `arr` with `max_chunk`, extended along `axis` by `pad_amt`
370
+ return np.concatenate((max_chunk.repeat(pad_amt, axis=axis), arr),
371
+ axis=axis)
372
+
373
+
374
+ def _append_max(arr, pad_amt, num, axis=-1):
375
+ """
376
+ Pad one `axis` of `arr` with the maximum of the last `num` elements.
377
+
378
+ Parameters
379
+ ----------
380
+ arr : ndarray
381
+ Input array of arbitrary shape.
382
+ pad_amt : int
383
+ Amount of padding to append.
384
+ num : int
385
+ Depth into `arr` along `axis` to calculate maximum.
386
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
387
+ axis : int
388
+ Axis along which to pad `arr`.
389
+
390
+ Returns
391
+ -------
392
+ padarr : ndarray
393
+ Output array, with `pad_amt` values appended along `axis`. The
394
+ appended region is the maximum of the final `num` values along `axis`.
395
+
396
+ """
397
+ if pad_amt == 0:
398
+ return arr
399
+
400
+ # Equivalent to edge padding for single value, so do that instead
401
+ if num == 1:
402
+ return _append_edge(arr, pad_amt, axis)
403
+
404
+ # Use entire array if `num` is too large
405
+ if num is not None:
406
+ if num >= arr.shape[axis]:
407
+ num = None
408
+
409
+ # Slice a chunk from the edge to calculate stats on
410
+ end = arr.shape[axis] - 1
411
+ if num is not None:
412
+ max_slice = tuple(
413
+ slice(None) if i != axis else slice(end, end - num, -1)
414
+ for (i, x) in enumerate(arr.shape))
415
+ else:
416
+ max_slice = tuple(slice(None) for x in arr.shape)
417
+
418
+ # Shape to restore singleton dimension after slicing
419
+ pad_singleton = tuple(x if i != axis else 1
420
+ for (i, x) in enumerate(arr.shape))
421
+
422
+ # Extract slice, calculate max, reshape to add singleton dimension back
423
+ max_chunk = arr[max_slice].max(axis=axis).reshape(pad_singleton)
424
+
425
+ # Concatenate `arr` with `max_chunk`, extended along `axis` by `pad_amt`
426
+ return np.concatenate((arr, max_chunk.repeat(pad_amt, axis=axis)),
427
+ axis=axis)
428
+
429
+
430
+ def _prepend_mean(arr, pad_amt, num, axis=-1):
431
+ """
432
+ Prepend `pad_amt` mean values along `axis`.
433
+
434
+ Parameters
435
+ ----------
436
+ arr : ndarray
437
+ Input array of arbitrary shape.
438
+ pad_amt : int
439
+ Amount of padding to prepend.
440
+ num : int
441
+ Depth into `arr` along `axis` to calculate mean.
442
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
443
+ axis : int
444
+ Axis along which to pad `arr`.
445
+
446
+ Returns
447
+ -------
448
+ padarr : ndarray
449
+ Output array, with `pad_amt` values prepended along `axis`. The
450
+ prepended region is the mean of the first `num` values along `axis`.
451
+
452
+ """
453
+ if pad_amt == 0:
454
+ return arr
455
+
456
+ # Equivalent to edge padding for single value, so do that instead
457
+ if num == 1:
458
+ return _prepend_edge(arr, pad_amt, axis)
459
+
460
+ # Use entire array if `num` is too large
461
+ if num is not None:
462
+ if num >= arr.shape[axis]:
463
+ num = None
464
+
465
+ # Slice a chunk from the edge to calculate stats on
466
+ mean_slice = tuple(slice(None) if i != axis else slice(num)
467
+ for (i, x) in enumerate(arr.shape))
468
+
469
+ # Shape to restore singleton dimension after slicing
470
+ pad_singleton = tuple(x if i != axis else 1
471
+ for (i, x) in enumerate(arr.shape))
472
+
473
+ # Extract slice, calculate mean, reshape to add singleton dimension back
474
+ mean_chunk = arr[mean_slice].mean(axis).reshape(pad_singleton)
475
+ _round_ifneeded(mean_chunk, arr.dtype)
476
+
477
+ # Concatenate `arr` with `mean_chunk`, extended along `axis` by `pad_amt`
478
+ return np.concatenate((mean_chunk.repeat(pad_amt, axis).astype(arr.dtype),
479
+ arr), axis=axis)
480
+
481
+
482
+ def _append_mean(arr, pad_amt, num, axis=-1):
483
+ """
484
+ Append `pad_amt` mean values along `axis`.
485
+
486
+ Parameters
487
+ ----------
488
+ arr : ndarray
489
+ Input array of arbitrary shape.
490
+ pad_amt : int
491
+ Amount of padding to append.
492
+ num : int
493
+ Depth into `arr` along `axis` to calculate mean.
494
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
495
+ axis : int
496
+ Axis along which to pad `arr`.
497
+
498
+ Returns
499
+ -------
500
+ padarr : ndarray
501
+ Output array, with `pad_amt` values appended along `axis`. The
502
+ appended region is the maximum of the final `num` values along `axis`.
503
+
504
+ """
505
+ if pad_amt == 0:
506
+ return arr
507
+
508
+ # Equivalent to edge padding for single value, so do that instead
509
+ if num == 1:
510
+ return _append_edge(arr, pad_amt, axis)
511
+
512
+ # Use entire array if `num` is too large
513
+ if num is not None:
514
+ if num >= arr.shape[axis]:
515
+ num = None
516
+
517
+ # Slice a chunk from the edge to calculate stats on
518
+ end = arr.shape[axis] - 1
519
+ if num is not None:
520
+ mean_slice = tuple(
521
+ slice(None) if i != axis else slice(end, end - num, -1)
522
+ for (i, x) in enumerate(arr.shape))
523
+ else:
524
+ mean_slice = tuple(slice(None) for x in arr.shape)
525
+
526
+ # Shape to restore singleton dimension after slicing
527
+ pad_singleton = tuple(x if i != axis else 1
528
+ for (i, x) in enumerate(arr.shape))
529
+
530
+ # Extract slice, calculate mean, reshape to add singleton dimension back
531
+ mean_chunk = arr[mean_slice].mean(axis=axis).reshape(pad_singleton)
532
+ _round_ifneeded(mean_chunk, arr.dtype)
533
+
534
+ # Concatenate `arr` with `mean_chunk`, extended along `axis` by `pad_amt`
535
+ return np.concatenate(
536
+ (arr, mean_chunk.repeat(pad_amt, axis).astype(arr.dtype)), axis=axis)
537
+
538
+
539
+ def _prepend_med(arr, pad_amt, num, axis=-1):
540
+ """
541
+ Prepend `pad_amt` median values along `axis`.
542
+
543
+ Parameters
544
+ ----------
545
+ arr : ndarray
546
+ Input array of arbitrary shape.
547
+ pad_amt : int
548
+ Amount of padding to prepend.
549
+ num : int
550
+ Depth into `arr` along `axis` to calculate median.
551
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
552
+ axis : int
553
+ Axis along which to pad `arr`.
554
+
555
+ Returns
556
+ -------
557
+ padarr : ndarray
558
+ Output array, with `pad_amt` values prepended along `axis`. The
559
+ prepended region is the median of the first `num` values along `axis`.
560
+
561
+ """
562
+ if pad_amt == 0:
563
+ return arr
564
+
565
+ # Equivalent to edge padding for single value, so do that instead
566
+ if num == 1:
567
+ return _prepend_edge(arr, pad_amt, axis)
568
+
569
+ # Use entire array if `num` is too large
570
+ if num is not None:
571
+ if num >= arr.shape[axis]:
572
+ num = None
573
+
574
+ # Slice a chunk from the edge to calculate stats on
575
+ med_slice = tuple(slice(None) if i != axis else slice(num)
576
+ for (i, x) in enumerate(arr.shape))
577
+
578
+ # Shape to restore singleton dimension after slicing
579
+ pad_singleton = tuple(x if i != axis else 1
580
+ for (i, x) in enumerate(arr.shape))
581
+
582
+ # Extract slice, calculate median, reshape to add singleton dimension back
583
+ med_chunk = np.median(arr[med_slice], axis=axis).reshape(pad_singleton)
584
+ _round_ifneeded(med_chunk, arr.dtype)
585
+
586
+ # Concatenate `arr` with `med_chunk`, extended along `axis` by `pad_amt`
587
+ return np.concatenate(
588
+ (med_chunk.repeat(pad_amt, axis).astype(arr.dtype), arr), axis=axis)
589
+
590
+
591
+ def _append_med(arr, pad_amt, num, axis=-1):
592
+ """
593
+ Append `pad_amt` median values along `axis`.
594
+
595
+ Parameters
596
+ ----------
597
+ arr : ndarray
598
+ Input array of arbitrary shape.
599
+ pad_amt : int
600
+ Amount of padding to append.
601
+ num : int
602
+ Depth into `arr` along `axis` to calculate median.
603
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
604
+ axis : int
605
+ Axis along which to pad `arr`.
606
+
607
+ Returns
608
+ -------
609
+ padarr : ndarray
610
+ Output array, with `pad_amt` values appended along `axis`. The
611
+ appended region is the median of the final `num` values along `axis`.
612
+
613
+ """
614
+ if pad_amt == 0:
615
+ return arr
616
+
617
+ # Equivalent to edge padding for single value, so do that instead
618
+ if num == 1:
619
+ return _append_edge(arr, pad_amt, axis)
620
+
621
+ # Use entire array if `num` is too large
622
+ if num is not None:
623
+ if num >= arr.shape[axis]:
624
+ num = None
625
+
626
+ # Slice a chunk from the edge to calculate stats on
627
+ end = arr.shape[axis] - 1
628
+ if num is not None:
629
+ med_slice = tuple(
630
+ slice(None) if i != axis else slice(end, end - num, -1)
631
+ for (i, x) in enumerate(arr.shape))
632
+ else:
633
+ med_slice = tuple(slice(None) for x in arr.shape)
634
+
635
+ # Shape to restore singleton dimension after slicing
636
+ pad_singleton = tuple(x if i != axis else 1
637
+ for (i, x) in enumerate(arr.shape))
638
+
639
+ # Extract slice, calculate median, reshape to add singleton dimension back
640
+ med_chunk = np.median(arr[med_slice], axis=axis).reshape(pad_singleton)
641
+ _round_ifneeded(med_chunk, arr.dtype)
642
+
643
+ # Concatenate `arr` with `med_chunk`, extended along `axis` by `pad_amt`
644
+ return np.concatenate(
645
+ (arr, med_chunk.repeat(pad_amt, axis).astype(arr.dtype)), axis=axis)
646
+
647
+
648
+ def _prepend_min(arr, pad_amt, num, axis=-1):
649
+ """
650
+ Prepend `pad_amt` minimum values along `axis`.
651
+
652
+ Parameters
653
+ ----------
654
+ arr : ndarray
655
+ Input array of arbitrary shape.
656
+ pad_amt : int
657
+ Amount of padding to prepend.
658
+ num : int
659
+ Depth into `arr` along `axis` to calculate minimum.
660
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
661
+ axis : int
662
+ Axis along which to pad `arr`.
663
+
664
+ Returns
665
+ -------
666
+ padarr : ndarray
667
+ Output array, with `pad_amt` values prepended along `axis`. The
668
+ prepended region is the minimum of the first `num` values along
669
+ `axis`.
670
+
671
+ """
672
+ if pad_amt == 0:
673
+ return arr
674
+
675
+ # Equivalent to edge padding for single value, so do that instead
676
+ if num == 1:
677
+ return _prepend_edge(arr, pad_amt, axis)
678
+
679
+ # Use entire array if `num` is too large
680
+ if num is not None:
681
+ if num >= arr.shape[axis]:
682
+ num = None
683
+
684
+ # Slice a chunk from the edge to calculate stats on
685
+ min_slice = tuple(slice(None) if i != axis else slice(num)
686
+ for (i, x) in enumerate(arr.shape))
687
+
688
+ # Shape to restore singleton dimension after slicing
689
+ pad_singleton = tuple(x if i != axis else 1
690
+ for (i, x) in enumerate(arr.shape))
691
+
692
+ # Extract slice, calculate min, reshape to add singleton dimension back
693
+ min_chunk = arr[min_slice].min(axis=axis).reshape(pad_singleton)
694
+
695
+ # Concatenate `arr` with `min_chunk`, extended along `axis` by `pad_amt`
696
+ return np.concatenate((min_chunk.repeat(pad_amt, axis=axis), arr),
697
+ axis=axis)
698
+
699
+
700
+ def _append_min(arr, pad_amt, num, axis=-1):
701
+ """
702
+ Append `pad_amt` median values along `axis`.
703
+
704
+ Parameters
705
+ ----------
706
+ arr : ndarray
707
+ Input array of arbitrary shape.
708
+ pad_amt : int
709
+ Amount of padding to append.
710
+ num : int
711
+ Depth into `arr` along `axis` to calculate minimum.
712
+ Range: [1, `arr.shape[axis]`] or None (entire axis)
713
+ axis : int
714
+ Axis along which to pad `arr`.
715
+
716
+ Returns
717
+ -------
718
+ padarr : ndarray
719
+ Output array, with `pad_amt` values appended along `axis`. The
720
+ appended region is the minimum of the final `num` values along `axis`.
721
+
722
+ """
723
+ if pad_amt == 0:
724
+ return arr
725
+
726
+ # Equivalent to edge padding for single value, so do that instead
727
+ if num == 1:
728
+ return _append_edge(arr, pad_amt, axis)
729
+
730
+ # Use entire array if `num` is too large
731
+ if num is not None:
732
+ if num >= arr.shape[axis]:
733
+ num = None
734
+
735
+ # Slice a chunk from the edge to calculate stats on
736
+ end = arr.shape[axis] - 1
737
+ if num is not None:
738
+ min_slice = tuple(
739
+ slice(None) if i != axis else slice(end, end - num, -1)
740
+ for (i, x) in enumerate(arr.shape))
741
+ else:
742
+ min_slice = tuple(slice(None) for x in arr.shape)
743
+
744
+ # Shape to restore singleton dimension after slicing
745
+ pad_singleton = tuple(x if i != axis else 1
746
+ for (i, x) in enumerate(arr.shape))
747
+
748
+ # Extract slice, calculate min, reshape to add singleton dimension back
749
+ min_chunk = arr[min_slice].min(axis=axis).reshape(pad_singleton)
750
+
751
+ # Concatenate `arr` with `min_chunk`, extended along `axis` by `pad_amt`
752
+ return np.concatenate((arr, min_chunk.repeat(pad_amt, axis=axis)),
753
+ axis=axis)
754
+
755
+
756
+ def _pad_ref(arr, pad_amt, method, axis=-1):
757
+ """
758
+ Pad `axis` of `arr` by reflection.
759
+
760
+ Parameters
761
+ ----------
762
+ arr : ndarray
763
+ Input array of arbitrary shape.
764
+ pad_amt : tuple of ints, length 2
765
+ Padding to (prepend, append) along `axis`.
766
+ method : str
767
+ Controls method of reflection; options are 'even' or 'odd'.
768
+ axis : int
769
+ Axis along which to pad `arr`.
770
+
771
+ Returns
772
+ -------
773
+ padarr : ndarray
774
+ Output array, with `pad_amt[0]` values prepended and `pad_amt[1]`
775
+ values appended along `axis`. Both regions are padded with reflected
776
+ values from the original array.
777
+
778
+ Notes
779
+ -----
780
+ This algorithm does not pad with repetition, i.e. the edges are not
781
+ repeated in the reflection. For that behavior, use `mode='symmetric'`.
782
+
783
+ The modes 'reflect', 'symmetric', and 'wrap' must be padded with a
784
+ single function, lest the indexing tricks in non-integer multiples of the
785
+ original shape would violate repetition in the final iteration.
786
+
787
+ """
788
+ # Implicit booleanness to test for zero (or None) in any scalar type
789
+ if pad_amt[0] == 0 and pad_amt[1] == 0:
790
+ return arr
791
+
792
+ ##########################################################################
793
+ # Prepended region
794
+
795
+ # Slice off a reverse indexed chunk from near edge to pad `arr` before
796
+ ref_slice = tuple(slice(None) if i != axis else slice(pad_amt[0], 0, -1)
797
+ for (i, x) in enumerate(arr.shape))
798
+
799
+ ref_chunk1 = arr[ref_slice]
800
+
801
+ # Shape to restore singleton dimension after slicing
802
+ pad_singleton = tuple(x if i != axis else 1
803
+ for (i, x) in enumerate(arr.shape))
804
+ if pad_amt[0] == 1:
805
+ ref_chunk1 = ref_chunk1.reshape(pad_singleton)
806
+
807
+ # Memory/computationally more expensive, only do this if `method='odd'`
808
+ if 'odd' in method and pad_amt[0] > 0:
809
+ edge_slice1 = tuple(slice(None) if i != axis else 0
810
+ for (i, x) in enumerate(arr.shape))
811
+ edge_chunk = arr[edge_slice1].reshape(pad_singleton)
812
+ ref_chunk1 = 2 * edge_chunk - ref_chunk1
813
+ del edge_chunk
814
+
815
+ ##########################################################################
816
+ # Appended region
817
+
818
+ # Slice off a reverse indexed chunk from far edge to pad `arr` after
819
+ start = arr.shape[axis] - pad_amt[1] - 1
820
+ end = arr.shape[axis] - 1
821
+ ref_slice = tuple(slice(None) if i != axis else slice(start, end)
822
+ for (i, x) in enumerate(arr.shape))
823
+ rev_idx = tuple(slice(None) if i != axis else slice(None, None, -1)
824
+ for (i, x) in enumerate(arr.shape))
825
+ ref_chunk2 = arr[ref_slice][rev_idx]
826
+
827
+ if pad_amt[1] == 1:
828
+ ref_chunk2 = ref_chunk2.reshape(pad_singleton)
829
+
830
+ if 'odd' in method:
831
+ edge_slice2 = tuple(slice(None) if i != axis else -1
832
+ for (i, x) in enumerate(arr.shape))
833
+ edge_chunk = arr[edge_slice2].reshape(pad_singleton)
834
+ ref_chunk2 = 2 * edge_chunk - ref_chunk2
835
+ del edge_chunk
836
+
837
+ # Concatenate `arr` with both chunks, extending along `axis`
838
+ return np.concatenate((ref_chunk1, arr, ref_chunk2), axis=axis)
839
+
840
+
841
+ def _pad_sym(arr, pad_amt, method, axis=-1):
842
+ """
843
+ Pad `axis` of `arr` by symmetry.
844
+
845
+ Parameters
846
+ ----------
847
+ arr : ndarray
848
+ Input array of arbitrary shape.
849
+ pad_amt : tuple of ints, length 2
850
+ Padding to (prepend, append) along `axis`.
851
+ method : str
852
+ Controls method of symmetry; options are 'even' or 'odd'.
853
+ axis : int
854
+ Axis along which to pad `arr`.
855
+
856
+ Returns
857
+ -------
858
+ padarr : ndarray
859
+ Output array, with `pad_amt[0]` values prepended and `pad_amt[1]`
860
+ values appended along `axis`. Both regions are padded with symmetric
861
+ values from the original array.
862
+
863
+ Notes
864
+ -----
865
+ This algorithm DOES pad with repetition, i.e. the edges are repeated.
866
+ For padding without repeated edges, use `mode='reflect'`.
867
+
868
+ The modes 'reflect', 'symmetric', and 'wrap' must be padded with a
869
+ single function, lest the indexing tricks in non-integer multiples of the
870
+ original shape would violate repetition in the final iteration.
871
+
872
+ """
873
+ # Implicit booleanness to test for zero (or None) in any scalar type
874
+ if pad_amt[0] == 0 and pad_amt[1] == 0:
875
+ return arr
876
+
877
+ ##########################################################################
878
+ # Prepended region
879
+
880
+ # Slice off a reverse indexed chunk from near edge to pad `arr` before
881
+ sym_slice = tuple(slice(None) if i != axis else slice(0, pad_amt[0])
882
+ for (i, x) in enumerate(arr.shape))
883
+ rev_idx = tuple(slice(None) if i != axis else slice(None, None, -1)
884
+ for (i, x) in enumerate(arr.shape))
885
+ sym_chunk1 = arr[sym_slice][rev_idx]
886
+
887
+ # Shape to restore singleton dimension after slicing
888
+ pad_singleton = tuple(x if i != axis else 1
889
+ for (i, x) in enumerate(arr.shape))
890
+ if pad_amt[0] == 1:
891
+ sym_chunk1 = sym_chunk1.reshape(pad_singleton)
892
+
893
+ # Memory/computationally more expensive, only do this if `method='odd'`
894
+ if 'odd' in method and pad_amt[0] > 0:
895
+ edge_slice1 = tuple(slice(None) if i != axis else 0
896
+ for (i, x) in enumerate(arr.shape))
897
+ edge_chunk = arr[edge_slice1].reshape(pad_singleton)
898
+ sym_chunk1 = 2 * edge_chunk - sym_chunk1
899
+ del edge_chunk
900
+
901
+ ##########################################################################
902
+ # Appended region
903
+
904
+ # Slice off a reverse indexed chunk from far edge to pad `arr` after
905
+ start = arr.shape[axis] - pad_amt[1]
906
+ end = arr.shape[axis]
907
+ sym_slice = tuple(slice(None) if i != axis else slice(start, end)
908
+ for (i, x) in enumerate(arr.shape))
909
+ sym_chunk2 = arr[sym_slice][rev_idx]
910
+
911
+ if pad_amt[1] == 1:
912
+ sym_chunk2 = sym_chunk2.reshape(pad_singleton)
913
+
914
+ if 'odd' in method:
915
+ edge_slice2 = tuple(slice(None) if i != axis else -1
916
+ for (i, x) in enumerate(arr.shape))
917
+ edge_chunk = arr[edge_slice2].reshape(pad_singleton)
918
+ sym_chunk2 = 2 * edge_chunk - sym_chunk2
919
+ del edge_chunk
920
+
921
+ # Concatenate `arr` with both chunks, extending along `axis`
922
+ return np.concatenate((sym_chunk1, arr, sym_chunk2), axis=axis)
923
+
924
+
925
+ def _pad_wrap(arr, pad_amt, axis=-1):
926
+ """
927
+ Pad `axis` of `arr` via wrapping.
928
+
929
+ Parameters
930
+ ----------
931
+ arr : ndarray
932
+ Input array of arbitrary shape.
933
+ pad_amt : tuple of ints, length 2
934
+ Padding to (prepend, append) along `axis`.
935
+ axis : int
936
+ Axis along which to pad `arr`.
937
+
938
+ Returns
939
+ -------
940
+ padarr : ndarray
941
+ Output array, with `pad_amt[0]` values prepended and `pad_amt[1]`
942
+ values appended along `axis`. Both regions are padded wrapped values
943
+ from the opposite end of `axis`.
944
+
945
+ Notes
946
+ -----
947
+ This method of padding is also known as 'tile' or 'tiling'.
948
+
949
+ The modes 'reflect', 'symmetric', and 'wrap' must be padded with a
950
+ single function, lest the indexing tricks in non-integer multiples of the
951
+ original shape would violate repetition in the final iteration.
952
+
953
+ """
954
+ # Implicit booleanness to test for zero (or None) in any scalar type
955
+ if pad_amt[0] == 0 and pad_amt[1] == 0:
956
+ return arr
957
+
958
+ ##########################################################################
959
+ # Prepended region
960
+
961
+ # Slice off a reverse indexed chunk from near edge to pad `arr` before
962
+ start = arr.shape[axis] - pad_amt[0]
963
+ end = arr.shape[axis]
964
+ wrap_slice = tuple(slice(None) if i != axis else slice(start, end)
965
+ for (i, x) in enumerate(arr.shape))
966
+ wrap_chunk1 = arr[wrap_slice]
967
+
968
+ # Shape to restore singleton dimension after slicing
969
+ pad_singleton = tuple(x if i != axis else 1
970
+ for (i, x) in enumerate(arr.shape))
971
+ if pad_amt[0] == 1:
972
+ wrap_chunk1 = wrap_chunk1.reshape(pad_singleton)
973
+
974
+ ##########################################################################
975
+ # Appended region
976
+
977
+ # Slice off a reverse indexed chunk from far edge to pad `arr` after
978
+ wrap_slice = tuple(slice(None) if i != axis else slice(0, pad_amt[1])
979
+ for (i, x) in enumerate(arr.shape))
980
+ wrap_chunk2 = arr[wrap_slice]
981
+
982
+ if pad_amt[1] == 1:
983
+ wrap_chunk2 = wrap_chunk2.reshape(pad_singleton)
984
+
985
+ # Concatenate `arr` with both chunks, extending along `axis`
986
+ return np.concatenate((wrap_chunk1, arr, wrap_chunk2), axis=axis)
987
+
988
+
989
+ def _normalize_shape(ndarray, shape, cast_to_int=True):
990
+ """
991
+ Private function which does some checks and normalizes the possibly
992
+ much simpler representations of 'pad_width', 'stat_length',
993
+ 'constant_values', 'end_values'.
994
+
995
+ Parameters
996
+ ----------
997
+ narray : ndarray
998
+ Input ndarray
999
+ shape : {sequence, array_like, float, int}, optional
1000
+ The width of padding (pad_width), the number of elements on the
1001
+ edge of the narray used for statistics (stat_length), the constant
1002
+ value(s) to use when filling padded regions (constant_values), or the
1003
+ endpoint target(s) for linear ramps (end_values).
1004
+ ((before_1, after_1), ... (before_N, after_N)) unique number of
1005
+ elements for each axis where `N` is rank of `narray`.
1006
+ ((before, after),) yields same before and after constants for each
1007
+ axis.
1008
+ (constant,) or val is a shortcut for before = after = constant for
1009
+ all axes.
1010
+ cast_to_int : bool, optional
1011
+ Controls if values in ``shape`` will be rounded and cast to int
1012
+ before being returned.
1013
+
1014
+ Returns
1015
+ -------
1016
+ normalized_shape : tuple of tuples
1017
+ val => ((val, val), (val, val), ...)
1018
+ [[val1, val2], [val3, val4], ...] => ((val1, val2), (val3, val4), ...)
1019
+ ((val1, val2), (val3, val4), ...) => no change
1020
+ [[val1, val2], ] => ((val1, val2), (val1, val2), ...)
1021
+ ((val1, val2), ) => ((val1, val2), (val1, val2), ...)
1022
+ [[val , ], ] => ((val, val), (val, val), ...)
1023
+ ((val , ), ) => ((val, val), (val, val), ...)
1024
+
1025
+ """
1026
+ ndims = ndarray.ndim
1027
+
1028
+ # Shortcut shape=None
1029
+ if shape is None:
1030
+ return ((None, None), ) * ndims
1031
+
1032
+ # Convert any input `info` to a NumPy array
1033
+ arr = np.asarray(shape)
1034
+
1035
+ # Switch based on what input looks like
1036
+ if arr.ndim <= 1:
1037
+ if arr.shape == () or arr.shape == (1,):
1038
+ # Single scalar input
1039
+ # Create new array of ones, multiply by the scalar
1040
+ arr = np.ones((ndims, 2), dtype=ndarray.dtype) * arr
1041
+ elif arr.shape == (2,):
1042
+ # Apply padding (before, after) each axis
1043
+ # Create new axis 0, repeat along it for every axis
1044
+ arr = arr[np.newaxis, :].repeat(ndims, axis=0)
1045
+ else:
1046
+ fmt = "Unable to create correctly shaped tuple from %s"
1047
+ raise ValueError(fmt % (shape,))
1048
+
1049
+ elif arr.ndim == 2:
1050
+ if arr.shape[1] == 1 and arr.shape[0] == ndims:
1051
+ # Padded before and after by the same amount
1052
+ arr = arr.repeat(2, axis=1)
1053
+ elif arr.shape[0] == ndims:
1054
+ # Input correctly formatted, pass it on as `arr`
1055
+ arr = shape
1056
+ else:
1057
+ fmt = "Unable to create correctly shaped tuple from %s"
1058
+ raise ValueError(fmt % (shape,))
1059
+
1060
+ else:
1061
+ fmt = "Unable to create correctly shaped tuple from %s"
1062
+ raise ValueError(fmt % (shape,))
1063
+
1064
+ # Cast if necessary
1065
+ if cast_to_int is True:
1066
+ arr = np.round(arr).astype(int)
1067
+
1068
+ # Convert list of lists to tuple of tuples
1069
+ return tuple(tuple(axis) for axis in arr.tolist())
1070
+
1071
+
1072
+ def _validate_lengths(narray, number_elements):
1073
+ """
1074
+ Private function which does some checks and reformats pad_width and
1075
+ stat_length using _normalize_shape.
1076
+
1077
+ Parameters
1078
+ ----------
1079
+ narray : ndarray
1080
+ Input ndarray
1081
+ number_elements : {sequence, int}, optional
1082
+ The width of padding (pad_width) or the number of elements on the edge
1083
+ of the narray used for statistics (stat_length).
1084
+ ((before_1, after_1), ... (before_N, after_N)) unique number of
1085
+ elements for each axis.
1086
+ ((before, after),) yields same before and after constants for each
1087
+ axis.
1088
+ (constant,) or int is a shortcut for before = after = constant for all
1089
+ axes.
1090
+
1091
+ Returns
1092
+ -------
1093
+ _validate_lengths : tuple of tuples
1094
+ int => ((int, int), (int, int), ...)
1095
+ [[int1, int2], [int3, int4], ...] => ((int1, int2), (int3, int4), ...)
1096
+ ((int1, int2), (int3, int4), ...) => no change
1097
+ [[int1, int2], ] => ((int1, int2), (int1, int2), ...)
1098
+ ((int1, int2), ) => ((int1, int2), (int1, int2), ...)
1099
+ [[int , ], ] => ((int, int), (int, int), ...)
1100
+ ((int , ), ) => ((int, int), (int, int), ...)
1101
+
1102
+ """
1103
+ normshp = _normalize_shape(narray, number_elements)
1104
+ for i in normshp:
1105
+ chk = [1 if x is None else x for x in i]
1106
+ chk = [1 if x >= 0 else -1 for x in chk]
1107
+ if (chk[0] < 0) or (chk[1] < 0):
1108
+ fmt = "%s cannot contain negative values."
1109
+ raise ValueError(fmt % (number_elements,))
1110
+ return normshp
1111
+
1112
+
1113
+ ###############################################################################
1114
+ # Public functions
1115
+
1116
+
1117
+ def pad(array, pad_width, mode=None, **kwargs):
1118
+ """
1119
+ Pads an array.
1120
+
1121
+ Parameters
1122
+ ----------
1123
+ array : array_like of rank N
1124
+ Input array
1125
+ pad_width : {sequence, array_like, int}
1126
+ Number of values padded to the edges of each axis.
1127
+ ((before_1, after_1), ... (before_N, after_N)) unique pad widths
1128
+ for each axis.
1129
+ ((before, after),) yields same before and after pad for each axis.
1130
+ (pad,) or int is a shortcut for before = after = pad width for all
1131
+ axes.
1132
+ mode : str or function
1133
+ One of the following string values or a user supplied function.
1134
+
1135
+ 'constant'
1136
+ Pads with a constant value.
1137
+ 'edge'
1138
+ Pads with the edge values of array.
1139
+ 'linear_ramp'
1140
+ Pads with the linear ramp between end_value and the
1141
+ array edge value.
1142
+ 'maximum'
1143
+ Pads with the maximum value of all or part of the
1144
+ vector along each axis.
1145
+ 'mean'
1146
+ Pads with the mean value of all or part of the
1147
+ vector along each axis.
1148
+ 'median'
1149
+ Pads with the median value of all or part of the
1150
+ vector along each axis.
1151
+ 'minimum'
1152
+ Pads with the minimum value of all or part of the
1153
+ vector along each axis.
1154
+ 'reflect'
1155
+ Pads with the reflection of the vector mirrored on
1156
+ the first and last values of the vector along each
1157
+ axis.
1158
+ 'symmetric'
1159
+ Pads with the reflection of the vector mirrored
1160
+ along the edge of the array.
1161
+ 'wrap'
1162
+ Pads with the wrap of the vector along the axis.
1163
+ The first values are used to pad the end and the
1164
+ end values are used to pad the beginning.
1165
+ <function>
1166
+ Padding function, see Notes.
1167
+ stat_length : sequence or int, optional
1168
+ Used in 'maximum', 'mean', 'median', and 'minimum'. Number of
1169
+ values at edge of each axis used to calculate the statistic value.
1170
+
1171
+ ((before_1, after_1), ... (before_N, after_N)) unique statistic
1172
+ lengths for each axis.
1173
+
1174
+ ((before, after),) yields same before and after statistic lengths
1175
+ for each axis.
1176
+
1177
+ (stat_length,) or int is a shortcut for before = after = statistic
1178
+ length for all axes.
1179
+
1180
+ Default is ``None``, to use the entire axis.
1181
+ constant_values : sequence or int, optional
1182
+ Used in 'constant'. The values to set the padded values for each
1183
+ axis.
1184
+
1185
+ ((before_1, after_1), ... (before_N, after_N)) unique pad constants
1186
+ for each axis.
1187
+
1188
+ ((before, after),) yields same before and after constants for each
1189
+ axis.
1190
+
1191
+ (constant,) or int is a shortcut for before = after = constant for
1192
+ all axes.
1193
+
1194
+ Default is 0.
1195
+ end_values : sequence or int, optional
1196
+ Used in 'linear_ramp'. The values used for the ending value of the
1197
+ linear_ramp and that will form the edge of the padded array.
1198
+
1199
+ ((before_1, after_1), ... (before_N, after_N)) unique end values
1200
+ for each axis.
1201
+
1202
+ ((before, after),) yields same before and after end values for each
1203
+ axis.
1204
+
1205
+ (constant,) or int is a shortcut for before = after = end value for
1206
+ all axes.
1207
+
1208
+ Default is 0.
1209
+ reflect_type : {'even', 'odd'}, optional
1210
+ Used in 'reflect', and 'symmetric'. The 'even' style is the
1211
+ default with an unaltered reflection around the edge value. For
1212
+ the 'odd' style, the extented part of the array is created by
1213
+ subtracting the reflected values from two times the edge value.
1214
+
1215
+ Returns
1216
+ -------
1217
+ pad : ndarray
1218
+ Padded array of rank equal to `array` with shape increased
1219
+ according to `pad_width`.
1220
+
1221
+ Notes
1222
+ -----
1223
+ .. versionadded:: 1.7.0
1224
+
1225
+ For an array with rank greater than 1, some of the padding of later
1226
+ axes is calculated from padding of previous axes. This is easiest to
1227
+ think about with a rank 2 array where the corners of the padded array
1228
+ are calculated by using padded values from the first axis.
1229
+
1230
+ The padding function, if used, should return a rank 1 array equal in
1231
+ length to the vector argument with padded values replaced. It has the
1232
+ following signature::
1233
+
1234
+ padding_func(vector, iaxis_pad_width, iaxis, **kwargs)
1235
+
1236
+ where
1237
+
1238
+ vector : ndarray
1239
+ A rank 1 array already padded with zeros. Padded values are
1240
+ vector[:pad_tuple[0]] and vector[-pad_tuple[1]:].
1241
+ iaxis_pad_width : tuple
1242
+ A 2-tuple of ints, iaxis_pad_width[0] represents the number of
1243
+ values padded at the beginning of vector where
1244
+ iaxis_pad_width[1] represents the number of values padded at
1245
+ the end of vector.
1246
+ iaxis : int
1247
+ The axis currently being calculated.
1248
+ kwargs : misc
1249
+ Any keyword arguments the function requires.
1250
+
1251
+ Examples
1252
+ --------
1253
+ >>> a = [1, 2, 3, 4, 5]
1254
+ >>> np.lib.pad(a, (2,3), 'constant', constant_values=(4, 6))
1255
+ array([4, 4, 1, 2, 3, 4, 5, 6, 6, 6])
1256
+
1257
+ >>> np.lib.pad(a, (2, 3), 'edge')
1258
+ array([1, 1, 1, 2, 3, 4, 5, 5, 5, 5])
1259
+
1260
+ >>> np.lib.pad(a, (2, 3), 'linear_ramp', end_values=(5, -4))
1261
+ array([ 5, 3, 1, 2, 3, 4, 5, 2, -1, -4])
1262
+
1263
+ >>> np.lib.pad(a, (2,), 'maximum')
1264
+ array([5, 5, 1, 2, 3, 4, 5, 5, 5])
1265
+
1266
+ >>> np.lib.pad(a, (2,), 'mean')
1267
+ array([3, 3, 1, 2, 3, 4, 5, 3, 3])
1268
+
1269
+ >>> np.lib.pad(a, (2,), 'median')
1270
+ array([3, 3, 1, 2, 3, 4, 5, 3, 3])
1271
+
1272
+ >>> a = [[1, 2], [3, 4]]
1273
+ >>> np.lib.pad(a, ((3, 2), (2, 3)), 'minimum')
1274
+ array([[1, 1, 1, 2, 1, 1, 1],
1275
+ [1, 1, 1, 2, 1, 1, 1],
1276
+ [1, 1, 1, 2, 1, 1, 1],
1277
+ [1, 1, 1, 2, 1, 1, 1],
1278
+ [3, 3, 3, 4, 3, 3, 3],
1279
+ [1, 1, 1, 2, 1, 1, 1],
1280
+ [1, 1, 1, 2, 1, 1, 1]])
1281
+
1282
+ >>> a = [1, 2, 3, 4, 5]
1283
+ >>> np.lib.pad(a, (2, 3), 'reflect')
1284
+ array([3, 2, 1, 2, 3, 4, 5, 4, 3, 2])
1285
+
1286
+ >>> np.lib.pad(a, (2, 3), 'reflect', reflect_type='odd')
1287
+ array([-1, 0, 1, 2, 3, 4, 5, 6, 7, 8])
1288
+
1289
+ >>> np.lib.pad(a, (2, 3), 'symmetric')
1290
+ array([2, 1, 1, 2, 3, 4, 5, 5, 4, 3])
1291
+
1292
+ >>> np.lib.pad(a, (2, 3), 'symmetric', reflect_type='odd')
1293
+ array([0, 1, 1, 2, 3, 4, 5, 5, 6, 7])
1294
+
1295
+ >>> np.lib.pad(a, (2, 3), 'wrap')
1296
+ array([4, 5, 1, 2, 3, 4, 5, 1, 2, 3])
1297
+
1298
+ >>> def padwithtens(vector, pad_width, iaxis, kwargs):
1299
+ ... vector[:pad_width[0]] = 10
1300
+ ... vector[-pad_width[1]:] = 10
1301
+ ... return vector
1302
+
1303
+ >>> a = np.arange(6)
1304
+ >>> a = a.reshape((2, 3))
1305
+
1306
+ >>> np.lib.pad(a, 2, padwithtens)
1307
+ array([[10, 10, 10, 10, 10, 10, 10],
1308
+ [10, 10, 10, 10, 10, 10, 10],
1309
+ [10, 10, 0, 1, 2, 10, 10],
1310
+ [10, 10, 3, 4, 5, 10, 10],
1311
+ [10, 10, 10, 10, 10, 10, 10],
1312
+ [10, 10, 10, 10, 10, 10, 10]])
1313
+ """
1314
+ if not np.asarray(pad_width).dtype.kind == 'i':
1315
+ raise TypeError('`pad_width` must be of integral type.')
1316
+
1317
+ narray = np.array(array)
1318
+ pad_width = _validate_lengths(narray, pad_width)
1319
+
1320
+ allowedkwargs = {
1321
+ 'constant': ['constant_values'],
1322
+ 'edge': [],
1323
+ 'linear_ramp': ['end_values'],
1324
+ 'maximum': ['stat_length'],
1325
+ 'mean': ['stat_length'],
1326
+ 'median': ['stat_length'],
1327
+ 'minimum': ['stat_length'],
1328
+ 'reflect': ['reflect_type'],
1329
+ 'symmetric': ['reflect_type'],
1330
+ 'wrap': [],
1331
+ }
1332
+
1333
+ kwdefaults = {
1334
+ 'stat_length': None,
1335
+ 'constant_values': 0,
1336
+ 'end_values': 0,
1337
+ 'reflect_type': 'even',
1338
+ }
1339
+
1340
+ if isinstance(mode, str):
1341
+ # Make sure have allowed kwargs appropriate for mode
1342
+ for key in kwargs:
1343
+ if key not in allowedkwargs[mode]:
1344
+ raise ValueError('%s keyword not in allowed keywords %s' %
1345
+ (key, allowedkwargs[mode]))
1346
+
1347
+ # Set kwarg defaults
1348
+ for kw in allowedkwargs[mode]:
1349
+ kwargs.setdefault(kw, kwdefaults[kw])
1350
+
1351
+ # Need to only normalize particular keywords.
1352
+ for i in kwargs:
1353
+ if i == 'stat_length':
1354
+ kwargs[i] = _validate_lengths(narray, kwargs[i])
1355
+ if i in ['end_values', 'constant_values']:
1356
+ kwargs[i] = _normalize_shape(narray, kwargs[i],
1357
+ cast_to_int=False)
1358
+ elif mode is None:
1359
+ raise ValueError('Keyword "mode" must be a function or one of %s.' %
1360
+ (list(allowedkwargs.keys()),))
1361
+ else:
1362
+ # Drop back to old, slower np.apply_along_axis mode for user-supplied
1363
+ # vector function
1364
+ function = mode
1365
+
1366
+ # Create a new padded array
1367
+ rank = list(range(len(narray.shape)))
1368
+ total_dim_increase = [np.sum(pad_width[i]) for i in rank]
1369
+ offset_slices = [slice(pad_width[i][0],
1370
+ pad_width[i][0] + narray.shape[i])
1371
+ for i in rank]
1372
+ new_shape = np.array(narray.shape) + total_dim_increase
1373
+ newmat = np.zeros(new_shape, narray.dtype)
1374
+
1375
+ # Insert the original array into the padded array
1376
+ newmat[offset_slices] = narray
1377
+
1378
+ # This is the core of pad ...
1379
+ for iaxis in rank:
1380
+ np.apply_along_axis(function,
1381
+ iaxis,
1382
+ newmat,
1383
+ pad_width[iaxis],
1384
+ iaxis,
1385
+ kwargs)
1386
+ return newmat
1387
+
1388
+ # If we get here, use new padding method
1389
+ newmat = narray.copy()
1390
+
1391
+ # API preserved, but completely new algorithm which pads by building the
1392
+ # entire block to pad before/after `arr` with in one step, for each axis.
1393
+ if mode == 'constant':
1394
+ for axis, ((pad_before, pad_after), (before_val, after_val)) \
1395
+ in enumerate(zip(pad_width, kwargs['constant_values'])):
1396
+ newmat = _prepend_const(newmat, pad_before, before_val, axis)
1397
+ newmat = _append_const(newmat, pad_after, after_val, axis)
1398
+
1399
+ elif mode == 'edge':
1400
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1401
+ newmat = _prepend_edge(newmat, pad_before, axis)
1402
+ newmat = _append_edge(newmat, pad_after, axis)
1403
+
1404
+ elif mode == 'linear_ramp':
1405
+ for axis, ((pad_before, pad_after), (before_val, after_val)) \
1406
+ in enumerate(zip(pad_width, kwargs['end_values'])):
1407
+ newmat = _prepend_ramp(newmat, pad_before, before_val, axis)
1408
+ newmat = _append_ramp(newmat, pad_after, after_val, axis)
1409
+
1410
+ elif mode == 'maximum':
1411
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1412
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1413
+ newmat = _prepend_max(newmat, pad_before, chunk_before, axis)
1414
+ newmat = _append_max(newmat, pad_after, chunk_after, axis)
1415
+
1416
+ elif mode == 'mean':
1417
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1418
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1419
+ newmat = _prepend_mean(newmat, pad_before, chunk_before, axis)
1420
+ newmat = _append_mean(newmat, pad_after, chunk_after, axis)
1421
+
1422
+ elif mode == 'median':
1423
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1424
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1425
+ newmat = _prepend_med(newmat, pad_before, chunk_before, axis)
1426
+ newmat = _append_med(newmat, pad_after, chunk_after, axis)
1427
+
1428
+ elif mode == 'minimum':
1429
+ for axis, ((pad_before, pad_after), (chunk_before, chunk_after)) \
1430
+ in enumerate(zip(pad_width, kwargs['stat_length'])):
1431
+ newmat = _prepend_min(newmat, pad_before, chunk_before, axis)
1432
+ newmat = _append_min(newmat, pad_after, chunk_after, axis)
1433
+
1434
+ elif mode == 'reflect':
1435
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1436
+ # Recursive padding along any axis where `pad_amt` is too large
1437
+ # for indexing tricks. We can only safely pad the original axis
1438
+ # length, to keep the period of the reflections consistent.
1439
+ if ((pad_before > 0) or
1440
+ (pad_after > 0)) and newmat.shape[axis] == 1:
1441
+ # Extending singleton dimension for 'reflect' is legacy
1442
+ # behavior; it really should raise an error.
1443
+ newmat = _prepend_edge(newmat, pad_before, axis)
1444
+ newmat = _append_edge(newmat, pad_after, axis)
1445
+ continue
1446
+
1447
+ method = kwargs['reflect_type']
1448
+ safe_pad = newmat.shape[axis] - 1
1449
+ while ((pad_before > safe_pad) or (pad_after > safe_pad)):
1450
+ pad_iter_b = min(safe_pad,
1451
+ safe_pad * (pad_before // safe_pad))
1452
+ pad_iter_a = min(safe_pad, safe_pad * (pad_after // safe_pad))
1453
+ newmat = _pad_ref(newmat, (pad_iter_b,
1454
+ pad_iter_a), method, axis)
1455
+ pad_before -= pad_iter_b
1456
+ pad_after -= pad_iter_a
1457
+ safe_pad += pad_iter_b + pad_iter_a
1458
+ newmat = _pad_ref(newmat, (pad_before, pad_after), method, axis)
1459
+
1460
+ elif mode == 'symmetric':
1461
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1462
+ # Recursive padding along any axis where `pad_amt` is too large
1463
+ # for indexing tricks. We can only safely pad the original axis
1464
+ # length, to keep the period of the reflections consistent.
1465
+ method = kwargs['reflect_type']
1466
+ safe_pad = newmat.shape[axis]
1467
+ while ((pad_before > safe_pad) or
1468
+ (pad_after > safe_pad)):
1469
+ pad_iter_b = min(safe_pad,
1470
+ safe_pad * (pad_before // safe_pad))
1471
+ pad_iter_a = min(safe_pad, safe_pad * (pad_after // safe_pad))
1472
+ newmat = _pad_sym(newmat, (pad_iter_b,
1473
+ pad_iter_a), method, axis)
1474
+ pad_before -= pad_iter_b
1475
+ pad_after -= pad_iter_a
1476
+ safe_pad += pad_iter_b + pad_iter_a
1477
+ newmat = _pad_sym(newmat, (pad_before, pad_after), method, axis)
1478
+
1479
+ elif mode == 'wrap':
1480
+ for axis, (pad_before, pad_after) in enumerate(pad_width):
1481
+ # Recursive padding along any axis where `pad_amt` is too large
1482
+ # for indexing tricks. We can only safely pad the original axis
1483
+ # length, to keep the period of the reflections consistent.
1484
+ safe_pad = newmat.shape[axis]
1485
+ while ((pad_before > safe_pad) or
1486
+ (pad_after > safe_pad)):
1487
+ pad_iter_b = min(safe_pad,
1488
+ safe_pad * (pad_before // safe_pad))
1489
+ pad_iter_a = min(safe_pad, safe_pad * (pad_after // safe_pad))
1490
+ newmat = _pad_wrap(newmat, (pad_iter_b, pad_iter_a), axis)
1491
+
1492
+ pad_before -= pad_iter_b
1493
+ pad_after -= pad_iter_a
1494
+ safe_pad += pad_iter_b + pad_iter_a
1495
+ newmat = _pad_wrap(newmat, (pad_before, pad_after), axis)
1496
+
1497
+ return newmat