monai-weekly 1.5.dev2505__py3-none-any.whl → 1.5.dev2507__py3-none-any.whl

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Files changed (779) hide show
  1. monai/__init__.py +1 -1
  2. monai/_version.py +3 -3
  3. monai/apps/auto3dseg/transforms.py +1 -4
  4. monai/data/meta_tensor.py +5 -0
  5. monai/data/utils.py +6 -13
  6. monai/inferers/utils.py +1 -2
  7. monai/losses/dice.py +2 -14
  8. monai/losses/ds_loss.py +1 -3
  9. monai/networks/layers/simplelayers.py +2 -14
  10. monai/networks/utils.py +4 -16
  11. monai/transforms/compose.py +28 -11
  12. monai/transforms/croppad/array.py +1 -6
  13. monai/transforms/io/array.py +0 -1
  14. monai/transforms/transform.py +15 -6
  15. monai/transforms/utils.py +1 -2
  16. monai/utils/jupyter_utils.py +1 -1
  17. monai/utils/tf32.py +0 -10
  18. monai/visualize/class_activation_maps.py +5 -8
  19. monai/visualize/img2tensorboard.py +2 -2
  20. {monai_weekly-1.5.dev2505.dist-info → monai_weekly-1.5.dev2507.dist-info}/METADATA +2 -2
  21. monai_weekly-1.5.dev2507.dist-info/RECORD +1181 -0
  22. {monai_weekly-1.5.dev2505.dist-info → monai_weekly-1.5.dev2507.dist-info}/top_level.txt +1 -0
  23. tests/apps/__init__.py +10 -0
  24. tests/apps/deepedit/__init__.py +10 -0
  25. tests/apps/deepedit/test_deepedit_transforms.py +314 -0
  26. tests/apps/deepgrow/__init__.py +10 -0
  27. tests/apps/deepgrow/test_deepgrow_dataset.py +109 -0
  28. tests/apps/deepgrow/transforms/__init__.py +10 -0
  29. tests/apps/deepgrow/transforms/test_deepgrow_interaction.py +97 -0
  30. tests/apps/deepgrow/transforms/test_deepgrow_transforms.py +556 -0
  31. tests/apps/detection/__init__.py +10 -0
  32. tests/apps/detection/metrics/__init__.py +10 -0
  33. tests/apps/detection/metrics/test_detection_coco_metrics.py +69 -0
  34. tests/apps/detection/networks/__init__.py +10 -0
  35. tests/apps/detection/networks/test_retinanet.py +210 -0
  36. tests/apps/detection/networks/test_retinanet_detector.py +203 -0
  37. tests/apps/detection/test_box_transform.py +370 -0
  38. tests/apps/detection/utils/__init__.py +10 -0
  39. tests/apps/detection/utils/test_anchor_box.py +88 -0
  40. tests/apps/detection/utils/test_atss_box_matcher.py +46 -0
  41. tests/apps/detection/utils/test_box_coder.py +43 -0
  42. tests/apps/detection/utils/test_detector_boxselector.py +67 -0
  43. tests/apps/detection/utils/test_detector_utils.py +96 -0
  44. tests/apps/detection/utils/test_hardnegsampler.py +54 -0
  45. tests/apps/nuclick/__init__.py +10 -0
  46. tests/apps/nuclick/test_nuclick_transforms.py +259 -0
  47. tests/apps/pathology/__init__.py +10 -0
  48. tests/apps/pathology/handlers/__init__.py +10 -0
  49. tests/apps/pathology/handlers/test_from_engine_hovernet.py +38 -0
  50. tests/apps/pathology/test_lesion_froc.py +333 -0
  51. tests/apps/pathology/test_pathology_prob_nms.py +55 -0
  52. tests/apps/pathology/test_prepare_batch_hovernet.py +70 -0
  53. tests/apps/pathology/test_sliding_window_hovernet_inference.py +303 -0
  54. tests/apps/pathology/transforms/__init__.py +10 -0
  55. tests/apps/pathology/transforms/post/__init__.py +10 -0
  56. tests/apps/pathology/transforms/post/test_generate_distance_map.py +51 -0
  57. tests/apps/pathology/transforms/post/test_generate_distance_mapd.py +70 -0
  58. tests/apps/pathology/transforms/post/test_generate_instance_border.py +49 -0
  59. tests/apps/pathology/transforms/post/test_generate_instance_borderd.py +59 -0
  60. tests/apps/pathology/transforms/post/test_generate_instance_centroid.py +53 -0
  61. tests/apps/pathology/transforms/post/test_generate_instance_centroidd.py +56 -0
  62. tests/apps/pathology/transforms/post/test_generate_instance_contour.py +58 -0
  63. tests/apps/pathology/transforms/post/test_generate_instance_contourd.py +61 -0
  64. tests/apps/pathology/transforms/post/test_generate_instance_type.py +51 -0
  65. tests/apps/pathology/transforms/post/test_generate_instance_typed.py +53 -0
  66. tests/apps/pathology/transforms/post/test_generate_succinct_contour.py +55 -0
  67. tests/apps/pathology/transforms/post/test_generate_succinct_contourd.py +57 -0
  68. tests/apps/pathology/transforms/post/test_generate_watershed_markers.py +53 -0
  69. tests/apps/pathology/transforms/post/test_generate_watershed_markersd.py +83 -0
  70. tests/apps/pathology/transforms/post/test_generate_watershed_mask.py +77 -0
  71. tests/apps/pathology/transforms/post/test_generate_watershed_maskd.py +77 -0
  72. tests/apps/pathology/transforms/post/test_hovernet_instance_map_post_processing.py +61 -0
  73. tests/apps/pathology/transforms/post/test_hovernet_instance_map_post_processingd.py +66 -0
  74. tests/apps/pathology/transforms/post/test_hovernet_nuclear_type_post_processing.py +66 -0
  75. tests/apps/pathology/transforms/post/test_watershed.py +60 -0
  76. tests/apps/pathology/transforms/post/test_watershedd.py +70 -0
  77. tests/apps/pathology/transforms/test_pathology_he_stain.py +230 -0
  78. tests/apps/pathology/transforms/test_pathology_he_stain_dict.py +225 -0
  79. tests/apps/reconstruction/__init__.py +10 -0
  80. tests/apps/reconstruction/nets/__init__.py +10 -0
  81. tests/apps/reconstruction/nets/test_recon_net_utils.py +82 -0
  82. tests/apps/reconstruction/test_complex_utils.py +77 -0
  83. tests/apps/reconstruction/test_fastmri_reader.py +82 -0
  84. tests/apps/reconstruction/test_mri_utils.py +37 -0
  85. tests/apps/reconstruction/transforms/__init__.py +10 -0
  86. tests/apps/reconstruction/transforms/test_kspace_mask.py +50 -0
  87. tests/apps/reconstruction/transforms/test_reference_based_normalize_intensity.py +77 -0
  88. tests/apps/reconstruction/transforms/test_reference_based_spatial_cropd.py +57 -0
  89. tests/apps/test_auto3dseg_bundlegen.py +156 -0
  90. tests/apps/test_check_hash.py +53 -0
  91. tests/apps/test_cross_validation.py +74 -0
  92. tests/apps/test_decathlondataset.py +93 -0
  93. tests/apps/test_download_and_extract.py +70 -0
  94. tests/apps/test_download_url_yandex.py +45 -0
  95. tests/apps/test_mednistdataset.py +72 -0
  96. tests/apps/test_mmar_download.py +154 -0
  97. tests/apps/test_tciadataset.py +123 -0
  98. tests/apps/vista3d/__init__.py +10 -0
  99. tests/apps/vista3d/test_point_based_window_inferer.py +77 -0
  100. tests/apps/vista3d/test_vista3d_sampler.py +100 -0
  101. tests/apps/vista3d/test_vista3d_transforms.py +94 -0
  102. tests/bundle/__init__.py +10 -0
  103. tests/bundle/test_bundle_ckpt_export.py +107 -0
  104. tests/bundle/test_bundle_download.py +435 -0
  105. tests/bundle/test_bundle_get_data.py +94 -0
  106. tests/bundle/test_bundle_push_to_hf_hub.py +41 -0
  107. tests/bundle/test_bundle_trt_export.py +147 -0
  108. tests/bundle/test_bundle_utils.py +149 -0
  109. tests/bundle/test_bundle_verify_metadata.py +66 -0
  110. tests/bundle/test_bundle_verify_net.py +76 -0
  111. tests/bundle/test_bundle_workflow.py +272 -0
  112. tests/bundle/test_component_locator.py +38 -0
  113. tests/bundle/test_config_item.py +138 -0
  114. tests/bundle/test_config_parser.py +392 -0
  115. tests/bundle/test_reference_resolver.py +114 -0
  116. tests/config/__init__.py +10 -0
  117. tests/config/test_cv2_dist.py +53 -0
  118. tests/engines/__init__.py +10 -0
  119. tests/engines/test_ensemble_evaluator.py +94 -0
  120. tests/engines/test_prepare_batch_default.py +76 -0
  121. tests/engines/test_prepare_batch_default_dist.py +76 -0
  122. tests/engines/test_prepare_batch_diffusion.py +104 -0
  123. tests/engines/test_prepare_batch_extra_input.py +80 -0
  124. tests/fl/__init__.py +10 -0
  125. tests/fl/monai_algo/__init__.py +10 -0
  126. tests/fl/monai_algo/test_fl_monai_algo.py +251 -0
  127. tests/fl/monai_algo/test_fl_monai_algo_dist.py +117 -0
  128. tests/fl/test_fl_monai_algo_stats.py +81 -0
  129. tests/fl/utils/__init__.py +10 -0
  130. tests/fl/utils/test_fl_exchange_object.py +63 -0
  131. tests/handlers/__init__.py +10 -0
  132. tests/handlers/test_handler_checkpoint_loader.py +182 -0
  133. tests/handlers/test_handler_checkpoint_saver.py +233 -0
  134. tests/handlers/test_handler_classification_saver.py +64 -0
  135. tests/handlers/test_handler_classification_saver_dist.py +77 -0
  136. tests/handlers/test_handler_clearml_image.py +65 -0
  137. tests/handlers/test_handler_clearml_stats.py +65 -0
  138. tests/handlers/test_handler_confusion_matrix.py +104 -0
  139. tests/handlers/test_handler_confusion_matrix_dist.py +70 -0
  140. tests/handlers/test_handler_decollate_batch.py +66 -0
  141. tests/handlers/test_handler_early_stop.py +68 -0
  142. tests/handlers/test_handler_garbage_collector.py +73 -0
  143. tests/handlers/test_handler_hausdorff_distance.py +111 -0
  144. tests/handlers/test_handler_ignite_metric.py +191 -0
  145. tests/handlers/test_handler_lr_scheduler.py +94 -0
  146. tests/handlers/test_handler_mean_dice.py +98 -0
  147. tests/handlers/test_handler_mean_iou.py +76 -0
  148. tests/handlers/test_handler_metrics_reloaded.py +149 -0
  149. tests/handlers/test_handler_metrics_saver.py +89 -0
  150. tests/handlers/test_handler_metrics_saver_dist.py +120 -0
  151. tests/handlers/test_handler_mlflow.py +296 -0
  152. tests/handlers/test_handler_nvtx.py +93 -0
  153. tests/handlers/test_handler_panoptic_quality.py +89 -0
  154. tests/handlers/test_handler_parameter_scheduler.py +136 -0
  155. tests/handlers/test_handler_post_processing.py +74 -0
  156. tests/handlers/test_handler_prob_map_producer.py +111 -0
  157. tests/handlers/test_handler_regression_metrics.py +160 -0
  158. tests/handlers/test_handler_regression_metrics_dist.py +245 -0
  159. tests/handlers/test_handler_rocauc.py +48 -0
  160. tests/handlers/test_handler_rocauc_dist.py +54 -0
  161. tests/handlers/test_handler_stats.py +281 -0
  162. tests/handlers/test_handler_surface_distance.py +113 -0
  163. tests/handlers/test_handler_tb_image.py +61 -0
  164. tests/handlers/test_handler_tb_stats.py +166 -0
  165. tests/handlers/test_handler_validation.py +59 -0
  166. tests/handlers/test_trt_compile.py +145 -0
  167. tests/handlers/test_write_metrics_reports.py +68 -0
  168. tests/inferers/__init__.py +10 -0
  169. tests/inferers/test_avg_merger.py +179 -0
  170. tests/inferers/test_controlnet_inferers.py +1310 -0
  171. tests/inferers/test_diffusion_inferer.py +236 -0
  172. tests/inferers/test_latent_diffusion_inferer.py +824 -0
  173. tests/inferers/test_patch_inferer.py +309 -0
  174. tests/inferers/test_saliency_inferer.py +55 -0
  175. tests/inferers/test_slice_inferer.py +57 -0
  176. tests/inferers/test_sliding_window_inference.py +377 -0
  177. tests/inferers/test_sliding_window_splitter.py +284 -0
  178. tests/inferers/test_wsi_sliding_window_splitter.py +249 -0
  179. tests/inferers/test_zarr_avg_merger.py +326 -0
  180. tests/integration/__init__.py +10 -0
  181. tests/integration/test_auto3dseg_ensemble.py +211 -0
  182. tests/integration/test_auto3dseg_hpo.py +189 -0
  183. tests/integration/test_deepedit_interaction.py +122 -0
  184. tests/integration/test_downsample_block.py +50 -0
  185. tests/integration/test_hovernet_nuclear_type_post_processingd.py +71 -0
  186. tests/integration/test_integration_autorunner.py +201 -0
  187. tests/integration/test_integration_bundle_run.py +240 -0
  188. tests/integration/test_integration_classification_2d.py +282 -0
  189. tests/integration/test_integration_determinism.py +95 -0
  190. tests/integration/test_integration_fast_train.py +231 -0
  191. tests/integration/test_integration_gpu_customization.py +159 -0
  192. tests/integration/test_integration_lazy_samples.py +219 -0
  193. tests/integration/test_integration_nnunetv2_runner.py +96 -0
  194. tests/integration/test_integration_segmentation_3d.py +304 -0
  195. tests/integration/test_integration_sliding_window.py +100 -0
  196. tests/integration/test_integration_stn.py +133 -0
  197. tests/integration/test_integration_unet_2d.py +67 -0
  198. tests/integration/test_integration_workers.py +61 -0
  199. tests/integration/test_integration_workflows.py +365 -0
  200. tests/integration/test_integration_workflows_adversarial.py +173 -0
  201. tests/integration/test_integration_workflows_gan.py +158 -0
  202. tests/integration/test_loader_semaphore.py +48 -0
  203. tests/integration/test_mapping_filed.py +122 -0
  204. tests/integration/test_meta_affine.py +183 -0
  205. tests/integration/test_metatensor_integration.py +114 -0
  206. tests/integration/test_module_list.py +76 -0
  207. tests/integration/test_one_of.py +283 -0
  208. tests/integration/test_pad_collation.py +124 -0
  209. tests/integration/test_reg_loss_integration.py +107 -0
  210. tests/integration/test_retinanet_predict_utils.py +154 -0
  211. tests/integration/test_seg_loss_integration.py +159 -0
  212. tests/integration/test_spatial_combine_transforms.py +185 -0
  213. tests/integration/test_testtimeaugmentation.py +186 -0
  214. tests/integration/test_vis_gradbased.py +69 -0
  215. tests/integration/test_vista3d_utils.py +159 -0
  216. tests/losses/__init__.py +10 -0
  217. tests/losses/deform/__init__.py +10 -0
  218. tests/losses/deform/test_bending_energy.py +88 -0
  219. tests/losses/deform/test_diffusion_loss.py +117 -0
  220. tests/losses/image_dissimilarity/__init__.py +10 -0
  221. tests/losses/image_dissimilarity/test_global_mutual_information_loss.py +150 -0
  222. tests/losses/image_dissimilarity/test_local_normalized_cross_correlation_loss.py +162 -0
  223. tests/losses/test_adversarial_loss.py +94 -0
  224. tests/losses/test_barlow_twins_loss.py +109 -0
  225. tests/losses/test_cldice_loss.py +51 -0
  226. tests/losses/test_contrastive_loss.py +86 -0
  227. tests/losses/test_dice_ce_loss.py +123 -0
  228. tests/losses/test_dice_focal_loss.py +124 -0
  229. tests/losses/test_dice_loss.py +227 -0
  230. tests/losses/test_ds_loss.py +189 -0
  231. tests/losses/test_focal_loss.py +379 -0
  232. tests/losses/test_generalized_dice_focal_loss.py +85 -0
  233. tests/losses/test_generalized_dice_loss.py +221 -0
  234. tests/losses/test_generalized_wasserstein_dice_loss.py +234 -0
  235. tests/losses/test_giou_loss.py +62 -0
  236. tests/losses/test_hausdorff_loss.py +264 -0
  237. tests/losses/test_masked_dice_loss.py +152 -0
  238. tests/losses/test_masked_loss.py +87 -0
  239. tests/losses/test_multi_scale.py +86 -0
  240. tests/losses/test_nacl_loss.py +167 -0
  241. tests/losses/test_perceptual_loss.py +122 -0
  242. tests/losses/test_spectral_loss.py +86 -0
  243. tests/losses/test_ssim_loss.py +59 -0
  244. tests/losses/test_sure_loss.py +72 -0
  245. tests/losses/test_tversky_loss.py +198 -0
  246. tests/losses/test_unified_focal_loss.py +66 -0
  247. tests/metrics/__init__.py +10 -0
  248. tests/metrics/test_compute_confusion_matrix.py +294 -0
  249. tests/metrics/test_compute_f_beta.py +80 -0
  250. tests/metrics/test_compute_fid_metric.py +40 -0
  251. tests/metrics/test_compute_froc.py +143 -0
  252. tests/metrics/test_compute_generalized_dice.py +240 -0
  253. tests/metrics/test_compute_meandice.py +306 -0
  254. tests/metrics/test_compute_meaniou.py +223 -0
  255. tests/metrics/test_compute_mmd_metric.py +56 -0
  256. tests/metrics/test_compute_multiscalessim_metric.py +83 -0
  257. tests/metrics/test_compute_panoptic_quality.py +113 -0
  258. tests/metrics/test_compute_regression_metrics.py +196 -0
  259. tests/metrics/test_compute_roc_auc.py +155 -0
  260. tests/metrics/test_compute_variance.py +147 -0
  261. tests/metrics/test_cumulative.py +63 -0
  262. tests/metrics/test_cumulative_average.py +74 -0
  263. tests/metrics/test_cumulative_average_dist.py +48 -0
  264. tests/metrics/test_hausdorff_distance.py +209 -0
  265. tests/metrics/test_label_quality_score.py +134 -0
  266. tests/metrics/test_loss_metric.py +57 -0
  267. tests/metrics/test_metrics_reloaded.py +96 -0
  268. tests/metrics/test_ssim_metric.py +78 -0
  269. tests/metrics/test_surface_dice.py +416 -0
  270. tests/metrics/test_surface_distance.py +186 -0
  271. tests/networks/__init__.py +10 -0
  272. tests/networks/blocks/__init__.py +10 -0
  273. tests/networks/blocks/dints_block/__init__.py +10 -0
  274. tests/networks/blocks/dints_block/test_acn_block.py +41 -0
  275. tests/networks/blocks/dints_block/test_factorized_increase.py +37 -0
  276. tests/networks/blocks/dints_block/test_factorized_reduce.py +37 -0
  277. tests/networks/blocks/dints_block/test_p3d_block.py +78 -0
  278. tests/networks/blocks/test_adn.py +86 -0
  279. tests/networks/blocks/test_convolutions.py +156 -0
  280. tests/networks/blocks/test_crf_cpu.py +513 -0
  281. tests/networks/blocks/test_crf_cuda.py +528 -0
  282. tests/networks/blocks/test_crossattention.py +185 -0
  283. tests/networks/blocks/test_denseblock.py +105 -0
  284. tests/networks/blocks/test_dynunet_block.py +116 -0
  285. tests/networks/blocks/test_fpn_block.py +88 -0
  286. tests/networks/blocks/test_localnet_block.py +121 -0
  287. tests/networks/blocks/test_mlp.py +78 -0
  288. tests/networks/blocks/test_patchembedding.py +212 -0
  289. tests/networks/blocks/test_regunet_block.py +103 -0
  290. tests/networks/blocks/test_se_block.py +85 -0
  291. tests/networks/blocks/test_se_blocks.py +78 -0
  292. tests/networks/blocks/test_segresnet_block.py +57 -0
  293. tests/networks/blocks/test_selfattention.py +232 -0
  294. tests/networks/blocks/test_simple_aspp.py +87 -0
  295. tests/networks/blocks/test_spatialattention.py +55 -0
  296. tests/networks/blocks/test_subpixel_upsample.py +87 -0
  297. tests/networks/blocks/test_text_encoding.py +49 -0
  298. tests/networks/blocks/test_transformerblock.py +90 -0
  299. tests/networks/blocks/test_unetr_block.py +158 -0
  300. tests/networks/blocks/test_upsample_block.py +134 -0
  301. tests/networks/blocks/warp/__init__.py +10 -0
  302. tests/networks/blocks/warp/test_dvf2ddf.py +72 -0
  303. tests/networks/blocks/warp/test_warp.py +250 -0
  304. tests/networks/layers/__init__.py +10 -0
  305. tests/networks/layers/filtering/__init__.py +10 -0
  306. tests/networks/layers/filtering/test_bilateral_approx_cpu.py +399 -0
  307. tests/networks/layers/filtering/test_bilateral_approx_cuda.py +404 -0
  308. tests/networks/layers/filtering/test_bilateral_precise.py +437 -0
  309. tests/networks/layers/filtering/test_phl_cpu.py +259 -0
  310. tests/networks/layers/filtering/test_phl_cuda.py +167 -0
  311. tests/networks/layers/filtering/test_trainable_bilateral.py +474 -0
  312. tests/networks/layers/filtering/test_trainable_joint_bilateral.py +609 -0
  313. tests/networks/layers/test_affine_transform.py +385 -0
  314. tests/networks/layers/test_apply_filter.py +89 -0
  315. tests/networks/layers/test_channel_pad.py +51 -0
  316. tests/networks/layers/test_conjugate_gradient.py +56 -0
  317. tests/networks/layers/test_drop_path.py +46 -0
  318. tests/networks/layers/test_gaussian.py +317 -0
  319. tests/networks/layers/test_gaussian_filter.py +206 -0
  320. tests/networks/layers/test_get_layers.py +65 -0
  321. tests/networks/layers/test_gmm.py +314 -0
  322. tests/networks/layers/test_grid_pull.py +93 -0
  323. tests/networks/layers/test_hilbert_transform.py +131 -0
  324. tests/networks/layers/test_lltm.py +62 -0
  325. tests/networks/layers/test_median_filter.py +52 -0
  326. tests/networks/layers/test_polyval.py +55 -0
  327. tests/networks/layers/test_preset_filters.py +136 -0
  328. tests/networks/layers/test_savitzky_golay_filter.py +141 -0
  329. tests/networks/layers/test_separable_filter.py +87 -0
  330. tests/networks/layers/test_skip_connection.py +48 -0
  331. tests/networks/layers/test_vector_quantizer.py +89 -0
  332. tests/networks/layers/test_weight_init.py +50 -0
  333. tests/networks/nets/__init__.py +10 -0
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  680. tests/transforms/test_spatial_resample.py +235 -0
  681. tests/transforms/test_squeezedim.py +62 -0
  682. tests/transforms/test_squeezedimd.py +98 -0
  683. tests/transforms/test_std_shift_intensity.py +76 -0
  684. tests/transforms/test_std_shift_intensityd.py +74 -0
  685. tests/transforms/test_threshold_intensity.py +38 -0
  686. tests/transforms/test_threshold_intensityd.py +58 -0
  687. tests/transforms/test_to_contiguous.py +47 -0
  688. tests/transforms/test_to_cupy.py +112 -0
  689. tests/transforms/test_to_cupyd.py +76 -0
  690. tests/transforms/test_to_device.py +42 -0
  691. tests/transforms/test_to_deviced.py +37 -0
  692. tests/transforms/test_to_numpy.py +85 -0
  693. tests/transforms/test_to_numpyd.py +68 -0
  694. tests/transforms/test_to_pil.py +52 -0
  695. tests/transforms/test_to_pild.py +50 -0
  696. tests/transforms/test_to_tensor.py +60 -0
  697. tests/transforms/test_to_tensord.py +71 -0
  698. tests/transforms/test_torchvision.py +66 -0
  699. tests/transforms/test_torchvisiond.py +63 -0
  700. tests/transforms/test_transform.py +62 -0
  701. tests/transforms/test_transpose.py +41 -0
  702. tests/transforms/test_transposed.py +52 -0
  703. tests/transforms/test_ultrasound_confidence_map_transform.py +711 -0
  704. tests/transforms/test_utils_pytorch_numpy_unification.py +90 -0
  705. tests/transforms/test_vote_ensemble.py +84 -0
  706. tests/transforms/test_vote_ensembled.py +107 -0
  707. tests/transforms/test_with_allow_missing_keys.py +76 -0
  708. tests/transforms/test_zoom.py +120 -0
  709. tests/transforms/test_zoomd.py +94 -0
  710. tests/transforms/transform/__init__.py +10 -0
  711. tests/transforms/transform/test_randomizable.py +52 -0
  712. tests/transforms/transform/test_randomizable_transform_type.py +37 -0
  713. tests/transforms/utility/__init__.py +10 -0
  714. tests/transforms/utility/test_apply_transform_to_points.py +81 -0
  715. tests/transforms/utility/test_apply_transform_to_pointsd.py +185 -0
  716. tests/transforms/utility/test_identity.py +29 -0
  717. tests/transforms/utility/test_identityd.py +30 -0
  718. tests/transforms/utility/test_lambda.py +71 -0
  719. tests/transforms/utility/test_lambdad.py +83 -0
  720. tests/transforms/utility/test_rand_lambda.py +87 -0
  721. tests/transforms/utility/test_rand_lambdad.py +77 -0
  722. tests/transforms/utility/test_simulatedelay.py +36 -0
  723. tests/transforms/utility/test_simulatedelayd.py +36 -0
  724. tests/transforms/utility/test_splitdim.py +52 -0
  725. tests/transforms/utility/test_splitdimd.py +96 -0
  726. tests/transforms/utils/__init__.py +10 -0
  727. tests/transforms/utils/test_correct_crop_centers.py +36 -0
  728. tests/transforms/utils/test_get_unique_labels.py +45 -0
  729. tests/transforms/utils/test_print_transform_backends.py +29 -0
  730. tests/transforms/utils/test_soft_clip.py +125 -0
  731. tests/utils/__init__.py +10 -0
  732. tests/utils/enums/__init__.py +10 -0
  733. tests/utils/enums/test_hovernet_loss.py +190 -0
  734. tests/utils/enums/test_ordering.py +289 -0
  735. tests/utils/enums/test_wsireader.py +663 -0
  736. tests/utils/misc/__init__.py +10 -0
  737. tests/utils/misc/test_ensure_tuple.py +53 -0
  738. tests/utils/misc/test_monai_env_vars.py +44 -0
  739. tests/utils/misc/test_monai_utils_misc.py +103 -0
  740. tests/utils/misc/test_str2bool.py +34 -0
  741. tests/utils/misc/test_str2list.py +33 -0
  742. tests/utils/test_alias.py +44 -0
  743. tests/utils/test_component_store.py +73 -0
  744. tests/utils/test_deprecated.py +455 -0
  745. tests/utils/test_enum_bound_interp.py +75 -0
  746. tests/utils/test_evenly_divisible_all_gather_dist.py +50 -0
  747. tests/utils/test_get_package_version.py +34 -0
  748. tests/utils/test_handler_logfile.py +84 -0
  749. tests/utils/test_handler_metric_logger.py +62 -0
  750. tests/utils/test_list_to_dict.py +43 -0
  751. tests/utils/test_look_up_option.py +87 -0
  752. tests/utils/test_optional_import.py +80 -0
  753. tests/utils/test_pad_mode.py +39 -0
  754. tests/utils/test_profiling.py +208 -0
  755. tests/utils/test_rankfilter_dist.py +77 -0
  756. tests/utils/test_require_pkg.py +83 -0
  757. tests/utils/test_sample_slices.py +43 -0
  758. tests/utils/test_set_determinism.py +74 -0
  759. tests/utils/test_squeeze_unsqueeze.py +71 -0
  760. tests/utils/test_state_cacher.py +67 -0
  761. tests/utils/test_torchscript_utils.py +113 -0
  762. tests/utils/test_version.py +91 -0
  763. tests/utils/test_version_after.py +65 -0
  764. tests/utils/type_conversion/__init__.py +10 -0
  765. tests/utils/type_conversion/test_convert_data_type.py +152 -0
  766. tests/utils/type_conversion/test_get_equivalent_dtype.py +65 -0
  767. tests/utils/type_conversion/test_safe_dtype_range.py +99 -0
  768. tests/visualize/__init__.py +10 -0
  769. tests/visualize/test_img2tensorboard.py +46 -0
  770. tests/visualize/test_occlusion_sensitivity.py +128 -0
  771. tests/visualize/test_plot_2d_or_3d_image.py +74 -0
  772. tests/visualize/test_vis_cam.py +98 -0
  773. tests/visualize/test_vis_gradcam.py +211 -0
  774. tests/visualize/utils/__init__.py +10 -0
  775. tests/visualize/utils/test_blend_images.py +63 -0
  776. tests/visualize/utils/test_matshow3d.py +133 -0
  777. monai_weekly-1.5.dev2505.dist-info/RECORD +0 -427
  778. {monai_weekly-1.5.dev2505.dist-info → monai_weekly-1.5.dev2507.dist-info}/LICENSE +0 -0
  779. {monai_weekly-1.5.dev2505.dist-info → monai_weekly-1.5.dev2507.dist-info}/WHEEL +0 -0
@@ -0,0 +1,585 @@
1
+ # Copyright (c) MONAI Consortium
2
+ # Licensed under the Apache License, Version 2.0 (the "License");
3
+ # you may not use this file except in compliance with the License.
4
+ # You may obtain a copy of the License at
5
+ # http://www.apache.org/licenses/LICENSE-2.0
6
+ # Unless required by applicable law or agreed to in writing, software
7
+ # distributed under the License is distributed on an "AS IS" BASIS,
8
+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
9
+ # See the License for the specific language governing permissions and
10
+ # limitations under the License.
11
+
12
+ from __future__ import annotations
13
+
14
+ import os
15
+ import tempfile
16
+ import unittest
17
+ from unittest import skipUnless
18
+
19
+ import torch
20
+ from parameterized import parameterized
21
+
22
+ from monai.apps import download_url
23
+ from monai.networks import eval_mode
24
+ from monai.networks.nets import DiffusionModelUNet
25
+ from monai.utils import optional_import
26
+ from tests.test_utils import skip_if_downloading_fails, testing_data_config
27
+
28
+ _, has_einops = optional_import("einops")
29
+
30
+ UNCOND_CASES_2D = [
31
+ [
32
+ {
33
+ "spatial_dims": 2,
34
+ "in_channels": 1,
35
+ "out_channels": 1,
36
+ "num_res_blocks": 1,
37
+ "channels": (8, 8, 8),
38
+ "attention_levels": (False, False, False),
39
+ "norm_num_groups": 8,
40
+ }
41
+ ],
42
+ [
43
+ {
44
+ "spatial_dims": 2,
45
+ "in_channels": 1,
46
+ "out_channels": 1,
47
+ "num_res_blocks": (1, 1, 2),
48
+ "channels": (8, 8, 8),
49
+ "attention_levels": (False, False, False),
50
+ "norm_num_groups": 8,
51
+ }
52
+ ],
53
+ [
54
+ {
55
+ "spatial_dims": 2,
56
+ "in_channels": 1,
57
+ "out_channels": 1,
58
+ "num_res_blocks": 1,
59
+ "channels": (8, 8, 8),
60
+ "attention_levels": (False, False, False),
61
+ "norm_num_groups": 8,
62
+ "resblock_updown": True,
63
+ }
64
+ ],
65
+ [
66
+ {
67
+ "spatial_dims": 2,
68
+ "in_channels": 1,
69
+ "out_channels": 1,
70
+ "num_res_blocks": 1,
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+ "channels": (8, 8, 8),
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+ "attention_levels": (False, False, True),
73
+ "num_head_channels": 8,
74
+ "norm_num_groups": 8,
75
+ }
76
+ ],
77
+ [
78
+ {
79
+ "spatial_dims": 2,
80
+ "in_channels": 1,
81
+ "out_channels": 1,
82
+ "num_res_blocks": 1,
83
+ "channels": (8, 8, 8),
84
+ "attention_levels": (False, False, True),
85
+ "num_head_channels": 8,
86
+ "norm_num_groups": 8,
87
+ "resblock_updown": True,
88
+ }
89
+ ],
90
+ [
91
+ {
92
+ "spatial_dims": 2,
93
+ "in_channels": 1,
94
+ "out_channels": 1,
95
+ "num_res_blocks": 1,
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+ "channels": (8, 8, 8),
97
+ "attention_levels": (False, False, True),
98
+ "num_head_channels": 4,
99
+ "norm_num_groups": 8,
100
+ }
101
+ ],
102
+ [
103
+ {
104
+ "spatial_dims": 2,
105
+ "in_channels": 1,
106
+ "out_channels": 1,
107
+ "num_res_blocks": 1,
108
+ "channels": (8, 8, 8),
109
+ "attention_levels": (False, True, True),
110
+ "num_head_channels": (0, 2, 4),
111
+ "norm_num_groups": 8,
112
+ }
113
+ ],
114
+ ]
115
+
116
+ UNCOND_CASES_3D = [
117
+ [
118
+ {
119
+ "spatial_dims": 3,
120
+ "in_channels": 1,
121
+ "out_channels": 1,
122
+ "num_res_blocks": 1,
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+ "channels": (8, 8, 8),
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+ "attention_levels": (False, False, False),
125
+ "norm_num_groups": 8,
126
+ }
127
+ ],
128
+ [
129
+ {
130
+ "spatial_dims": 3,
131
+ "in_channels": 1,
132
+ "out_channels": 1,
133
+ "num_res_blocks": 1,
134
+ "channels": (8, 8, 8),
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+ "attention_levels": (False, False, False),
136
+ "norm_num_groups": 8,
137
+ "resblock_updown": True,
138
+ }
139
+ ],
140
+ [
141
+ {
142
+ "spatial_dims": 3,
143
+ "in_channels": 1,
144
+ "out_channels": 1,
145
+ "num_res_blocks": 1,
146
+ "channels": (8, 8, 8),
147
+ "attention_levels": (False, False, True),
148
+ "num_head_channels": 8,
149
+ "norm_num_groups": 8,
150
+ }
151
+ ],
152
+ [
153
+ {
154
+ "spatial_dims": 3,
155
+ "in_channels": 1,
156
+ "out_channels": 1,
157
+ "num_res_blocks": 1,
158
+ "channels": (8, 8, 8),
159
+ "attention_levels": (False, False, True),
160
+ "num_head_channels": 8,
161
+ "norm_num_groups": 8,
162
+ "resblock_updown": True,
163
+ }
164
+ ],
165
+ [
166
+ {
167
+ "spatial_dims": 3,
168
+ "in_channels": 1,
169
+ "out_channels": 1,
170
+ "num_res_blocks": 1,
171
+ "channels": (8, 8, 8),
172
+ "attention_levels": (False, False, True),
173
+ "num_head_channels": 4,
174
+ "norm_num_groups": 8,
175
+ }
176
+ ],
177
+ [
178
+ {
179
+ "spatial_dims": 3,
180
+ "in_channels": 1,
181
+ "out_channels": 1,
182
+ "num_res_blocks": 1,
183
+ "channels": (8, 8, 8),
184
+ "attention_levels": (False, False, True),
185
+ "num_head_channels": (0, 0, 4),
186
+ "norm_num_groups": 8,
187
+ }
188
+ ],
189
+ ]
190
+
191
+ COND_CASES_2D = [
192
+ [
193
+ {
194
+ "spatial_dims": 2,
195
+ "in_channels": 1,
196
+ "out_channels": 1,
197
+ "num_res_blocks": 1,
198
+ "channels": (8, 8, 8),
199
+ "attention_levels": (False, False, True),
200
+ "num_head_channels": 4,
201
+ "norm_num_groups": 8,
202
+ "with_conditioning": True,
203
+ "transformer_num_layers": 1,
204
+ "cross_attention_dim": 3,
205
+ }
206
+ ],
207
+ [
208
+ {
209
+ "spatial_dims": 2,
210
+ "in_channels": 1,
211
+ "out_channels": 1,
212
+ "num_res_blocks": 1,
213
+ "channels": (8, 8, 8),
214
+ "attention_levels": (False, False, True),
215
+ "num_head_channels": 4,
216
+ "norm_num_groups": 8,
217
+ "with_conditioning": True,
218
+ "transformer_num_layers": 1,
219
+ "cross_attention_dim": 3,
220
+ "resblock_updown": True,
221
+ }
222
+ ],
223
+ [
224
+ {
225
+ "spatial_dims": 2,
226
+ "in_channels": 1,
227
+ "out_channels": 1,
228
+ "num_res_blocks": 1,
229
+ "channels": (8, 8, 8),
230
+ "attention_levels": (False, False, True),
231
+ "num_head_channels": 4,
232
+ "norm_num_groups": 8,
233
+ "with_conditioning": True,
234
+ "transformer_num_layers": 1,
235
+ "cross_attention_dim": 3,
236
+ "upcast_attention": True,
237
+ }
238
+ ],
239
+ ]
240
+
241
+ DROPOUT_OK = [
242
+ [
243
+ {
244
+ "spatial_dims": 2,
245
+ "in_channels": 1,
246
+ "out_channels": 1,
247
+ "num_res_blocks": 1,
248
+ "channels": (8, 8, 8),
249
+ "attention_levels": (False, False, True),
250
+ "num_head_channels": 4,
251
+ "norm_num_groups": 8,
252
+ "with_conditioning": True,
253
+ "transformer_num_layers": 1,
254
+ "cross_attention_dim": 3,
255
+ "dropout_cattn": 0.25,
256
+ }
257
+ ],
258
+ [
259
+ {
260
+ "spatial_dims": 2,
261
+ "in_channels": 1,
262
+ "out_channels": 1,
263
+ "num_res_blocks": 1,
264
+ "channels": (8, 8, 8),
265
+ "attention_levels": (False, False, True),
266
+ "num_head_channels": 4,
267
+ "norm_num_groups": 8,
268
+ "with_conditioning": True,
269
+ "transformer_num_layers": 1,
270
+ "cross_attention_dim": 3,
271
+ }
272
+ ],
273
+ ]
274
+
275
+ DROPOUT_WRONG = [
276
+ [
277
+ {
278
+ "spatial_dims": 2,
279
+ "in_channels": 1,
280
+ "out_channels": 1,
281
+ "num_res_blocks": 1,
282
+ "channels": (8, 8, 8),
283
+ "attention_levels": (False, False, True),
284
+ "num_head_channels": 4,
285
+ "norm_num_groups": 8,
286
+ "with_conditioning": True,
287
+ "transformer_num_layers": 1,
288
+ "cross_attention_dim": 3,
289
+ "dropout_cattn": 3.0,
290
+ }
291
+ ]
292
+ ]
293
+
294
+
295
+ class TestDiffusionModelUNet2D(unittest.TestCase):
296
+ @parameterized.expand(UNCOND_CASES_2D)
297
+ @skipUnless(has_einops, "Requires einops")
298
+ def test_shape_unconditioned_models(self, input_param):
299
+ net = DiffusionModelUNet(**input_param)
300
+ with eval_mode(net):
301
+ result = net.forward(torch.rand((1, 1, 16, 16)), torch.randint(0, 1000, (1,)).long())
302
+ self.assertEqual(result.shape, (1, 1, 16, 16))
303
+
304
+ @skipUnless(has_einops, "Requires einops")
305
+ def test_timestep_with_wrong_shape(self):
306
+ net = DiffusionModelUNet(
307
+ spatial_dims=2,
308
+ in_channels=1,
309
+ out_channels=1,
310
+ num_res_blocks=1,
311
+ channels=(8, 8, 8),
312
+ attention_levels=(False, False, False),
313
+ norm_num_groups=8,
314
+ )
315
+ with self.assertRaises(ValueError):
316
+ with eval_mode(net):
317
+ net.forward(torch.rand((1, 1, 16, 16)), torch.randint(0, 1000, (1, 1)).long())
318
+
319
+ @skipUnless(has_einops, "Requires einops")
320
+ def test_shape_with_different_in_channel_out_channel(self):
321
+ in_channels = 6
322
+ out_channels = 3
323
+ net = DiffusionModelUNet(
324
+ spatial_dims=2,
325
+ in_channels=in_channels,
326
+ out_channels=out_channels,
327
+ num_res_blocks=1,
328
+ channels=(8, 8, 8),
329
+ attention_levels=(False, False, False),
330
+ norm_num_groups=8,
331
+ )
332
+ with eval_mode(net):
333
+ result = net.forward(torch.rand((1, in_channels, 16, 16)), torch.randint(0, 1000, (1,)).long())
334
+ self.assertEqual(result.shape, (1, out_channels, 16, 16))
335
+
336
+ def test_model_channels_not_multiple_of_norm_num_group(self):
337
+ with self.assertRaises(ValueError):
338
+ DiffusionModelUNet(
339
+ spatial_dims=2,
340
+ in_channels=1,
341
+ out_channels=1,
342
+ num_res_blocks=1,
343
+ channels=(8, 8, 12),
344
+ attention_levels=(False, False, False),
345
+ norm_num_groups=8,
346
+ )
347
+
348
+ def test_attention_levels_with_different_length_num_head_channels(self):
349
+ with self.assertRaises(ValueError):
350
+ DiffusionModelUNet(
351
+ spatial_dims=2,
352
+ in_channels=1,
353
+ out_channels=1,
354
+ num_res_blocks=1,
355
+ channels=(8, 8, 8),
356
+ attention_levels=(False, False, False),
357
+ num_head_channels=(0, 2),
358
+ norm_num_groups=8,
359
+ )
360
+
361
+ def test_num_res_blocks_with_different_length_channels(self):
362
+ with self.assertRaises(ValueError):
363
+ DiffusionModelUNet(
364
+ spatial_dims=2,
365
+ in_channels=1,
366
+ out_channels=1,
367
+ num_res_blocks=(1, 1),
368
+ channels=(8, 8, 8),
369
+ attention_levels=(False, False, False),
370
+ norm_num_groups=8,
371
+ )
372
+
373
+ @skipUnless(has_einops, "Requires einops")
374
+ def test_shape_conditioned_models(self):
375
+ net = DiffusionModelUNet(
376
+ spatial_dims=2,
377
+ in_channels=1,
378
+ out_channels=1,
379
+ num_res_blocks=1,
380
+ channels=(8, 8, 8),
381
+ attention_levels=(False, False, True),
382
+ with_conditioning=True,
383
+ transformer_num_layers=1,
384
+ cross_attention_dim=3,
385
+ norm_num_groups=8,
386
+ num_head_channels=8,
387
+ )
388
+ with eval_mode(net):
389
+ result = net.forward(
390
+ x=torch.rand((1, 1, 16, 32)),
391
+ timesteps=torch.randint(0, 1000, (1,)).long(),
392
+ context=torch.rand((1, 1, 3)),
393
+ )
394
+ self.assertEqual(result.shape, (1, 1, 16, 32))
395
+
396
+ def test_with_conditioning_cross_attention_dim_none(self):
397
+ with self.assertRaises(ValueError):
398
+ DiffusionModelUNet(
399
+ spatial_dims=2,
400
+ in_channels=1,
401
+ out_channels=1,
402
+ num_res_blocks=1,
403
+ channels=(8, 8, 8),
404
+ attention_levels=(False, False, True),
405
+ with_conditioning=True,
406
+ transformer_num_layers=1,
407
+ cross_attention_dim=None,
408
+ norm_num_groups=8,
409
+ )
410
+
411
+ @skipUnless(has_einops, "Requires einops")
412
+ def test_context_with_conditioning_none(self):
413
+ net = DiffusionModelUNet(
414
+ spatial_dims=2,
415
+ in_channels=1,
416
+ out_channels=1,
417
+ num_res_blocks=1,
418
+ channels=(8, 8, 8),
419
+ attention_levels=(False, False, True),
420
+ with_conditioning=False,
421
+ transformer_num_layers=1,
422
+ norm_num_groups=8,
423
+ )
424
+
425
+ with self.assertRaises(ValueError):
426
+ with eval_mode(net):
427
+ net.forward(
428
+ x=torch.rand((1, 1, 16, 32)),
429
+ timesteps=torch.randint(0, 1000, (1,)).long(),
430
+ context=torch.rand((1, 1, 3)),
431
+ )
432
+
433
+ @skipUnless(has_einops, "Requires einops")
434
+ def test_shape_conditioned_models_class_conditioning(self):
435
+ net = DiffusionModelUNet(
436
+ spatial_dims=2,
437
+ in_channels=1,
438
+ out_channels=1,
439
+ num_res_blocks=1,
440
+ channels=(8, 8, 8),
441
+ attention_levels=(False, False, True),
442
+ norm_num_groups=8,
443
+ num_head_channels=8,
444
+ num_class_embeds=2,
445
+ )
446
+ with eval_mode(net):
447
+ result = net.forward(
448
+ x=torch.rand((1, 1, 16, 32)),
449
+ timesteps=torch.randint(0, 1000, (1,)).long(),
450
+ class_labels=torch.randint(0, 2, (1,)).long(),
451
+ )
452
+ self.assertEqual(result.shape, (1, 1, 16, 32))
453
+
454
+ @skipUnless(has_einops, "Requires einops")
455
+ def test_conditioned_models_no_class_labels(self):
456
+ net = DiffusionModelUNet(
457
+ spatial_dims=2,
458
+ in_channels=1,
459
+ out_channels=1,
460
+ num_res_blocks=1,
461
+ channels=(8, 8, 8),
462
+ attention_levels=(False, False, True),
463
+ norm_num_groups=8,
464
+ num_head_channels=8,
465
+ num_class_embeds=2,
466
+ )
467
+
468
+ with self.assertRaises(ValueError):
469
+ net.forward(x=torch.rand((1, 1, 16, 32)), timesteps=torch.randint(0, 1000, (1,)).long())
470
+
471
+ @skipUnless(has_einops, "Requires einops")
472
+ def test_model_channels_not_same_size_of_attention_levels(self):
473
+ with self.assertRaises(ValueError):
474
+ DiffusionModelUNet(
475
+ spatial_dims=2,
476
+ in_channels=1,
477
+ out_channels=1,
478
+ num_res_blocks=1,
479
+ channels=(8, 8, 8),
480
+ attention_levels=(False, False),
481
+ norm_num_groups=8,
482
+ num_head_channels=8,
483
+ num_class_embeds=2,
484
+ )
485
+
486
+ @parameterized.expand(COND_CASES_2D)
487
+ @skipUnless(has_einops, "Requires einops")
488
+ def test_conditioned_2d_models_shape(self, input_param):
489
+ net = DiffusionModelUNet(**input_param)
490
+ with eval_mode(net):
491
+ result = net.forward(torch.rand((1, 1, 16, 16)), torch.randint(0, 1000, (1,)).long(), torch.rand((1, 1, 3)))
492
+ self.assertEqual(result.shape, (1, 1, 16, 16))
493
+
494
+
495
+ class TestDiffusionModelUNet3D(unittest.TestCase):
496
+ @parameterized.expand(UNCOND_CASES_3D)
497
+ @skipUnless(has_einops, "Requires einops")
498
+ def test_shape_unconditioned_models(self, input_param):
499
+ net = DiffusionModelUNet(**input_param)
500
+ with eval_mode(net):
501
+ result = net.forward(torch.rand((1, 1, 16, 16, 16)), torch.randint(0, 1000, (1,)).long())
502
+ self.assertEqual(result.shape, (1, 1, 16, 16, 16))
503
+
504
+ @skipUnless(has_einops, "Requires einops")
505
+ def test_shape_with_different_in_channel_out_channel(self):
506
+ in_channels = 6
507
+ out_channels = 3
508
+ net = DiffusionModelUNet(
509
+ spatial_dims=3,
510
+ in_channels=in_channels,
511
+ out_channels=out_channels,
512
+ num_res_blocks=1,
513
+ channels=(8, 8, 8),
514
+ attention_levels=(False, False, True),
515
+ norm_num_groups=4,
516
+ )
517
+ with eval_mode(net):
518
+ result = net.forward(torch.rand((1, in_channels, 16, 16, 16)), torch.randint(0, 1000, (1,)).long())
519
+ self.assertEqual(result.shape, (1, out_channels, 16, 16, 16))
520
+
521
+ @skipUnless(has_einops, "Requires einops")
522
+ def test_shape_conditioned_models(self):
523
+ net = DiffusionModelUNet(
524
+ spatial_dims=3,
525
+ in_channels=1,
526
+ out_channels=1,
527
+ num_res_blocks=1,
528
+ channels=(16, 16, 16),
529
+ attention_levels=(False, False, True),
530
+ norm_num_groups=16,
531
+ with_conditioning=True,
532
+ transformer_num_layers=1,
533
+ cross_attention_dim=3,
534
+ )
535
+ with eval_mode(net):
536
+ result = net.forward(
537
+ x=torch.rand((1, 1, 16, 16, 16)),
538
+ timesteps=torch.randint(0, 1000, (1,)).long(),
539
+ context=torch.rand((1, 1, 3)),
540
+ )
541
+ self.assertEqual(result.shape, (1, 1, 16, 16, 16))
542
+
543
+ # Test dropout specification for cross-attention blocks
544
+ @parameterized.expand(DROPOUT_WRONG)
545
+ def test_wrong_dropout(self, input_param):
546
+ with self.assertRaises(ValueError):
547
+ _ = DiffusionModelUNet(**input_param)
548
+
549
+ @parameterized.expand(DROPOUT_OK)
550
+ @skipUnless(has_einops, "Requires einops")
551
+ def test_right_dropout(self, input_param):
552
+ _ = DiffusionModelUNet(**input_param)
553
+
554
+ @skipUnless(has_einops, "Requires einops")
555
+ def test_compatibility_with_monai_generative(self):
556
+ # test loading weights from a model saved in MONAI Generative, version 0.2.3
557
+ with skip_if_downloading_fails():
558
+ net = DiffusionModelUNet(
559
+ spatial_dims=2,
560
+ in_channels=1,
561
+ out_channels=1,
562
+ num_res_blocks=1,
563
+ channels=(8, 8, 8),
564
+ attention_levels=(False, False, True),
565
+ with_conditioning=True,
566
+ cross_attention_dim=3,
567
+ transformer_num_layers=1,
568
+ norm_num_groups=8,
569
+ )
570
+
571
+ tmpdir = tempfile.mkdtemp()
572
+ key = "diffusion_model_unet_monai_generative_weights"
573
+ url = testing_data_config("models", key, "url")
574
+ hash_type = testing_data_config("models", key, "hash_type")
575
+ hash_val = testing_data_config("models", key, "hash_val")
576
+ filename = "diffusion_model_unet_monai_generative_weights.pt"
577
+
578
+ weight_path = os.path.join(tmpdir, filename)
579
+ download_url(url=url, filepath=weight_path, hash_val=hash_val, hash_type=hash_type)
580
+
581
+ net.load_old_state_dict(torch.load(weight_path), verbose=False)
582
+
583
+
584
+ if __name__ == "__main__":
585
+ unittest.main()