brainstate 0.1.8__py2.py3-none-any.whl → 0.1.10__py2.py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (133) hide show
  1. brainstate/__init__.py +58 -51
  2. brainstate/_compatible_import.py +148 -148
  3. brainstate/_state.py +1605 -1663
  4. brainstate/_state_test.py +52 -52
  5. brainstate/_utils.py +47 -47
  6. brainstate/augment/__init__.py +30 -30
  7. brainstate/augment/_autograd.py +778 -778
  8. brainstate/augment/_autograd_test.py +1289 -1289
  9. brainstate/augment/_eval_shape.py +99 -99
  10. brainstate/augment/_eval_shape_test.py +38 -38
  11. brainstate/augment/_mapping.py +1060 -1060
  12. brainstate/augment/_mapping_test.py +597 -597
  13. brainstate/augment/_random.py +151 -151
  14. brainstate/compile/__init__.py +38 -38
  15. brainstate/compile/_ad_checkpoint.py +204 -204
  16. brainstate/compile/_ad_checkpoint_test.py +49 -49
  17. brainstate/compile/_conditions.py +256 -256
  18. brainstate/compile/_conditions_test.py +220 -220
  19. brainstate/compile/_error_if.py +92 -92
  20. brainstate/compile/_error_if_test.py +52 -52
  21. brainstate/compile/_jit.py +346 -346
  22. brainstate/compile/_jit_test.py +143 -143
  23. brainstate/compile/_loop_collect_return.py +536 -536
  24. brainstate/compile/_loop_collect_return_test.py +58 -58
  25. brainstate/compile/_loop_no_collection.py +184 -184
  26. brainstate/compile/_loop_no_collection_test.py +50 -50
  27. brainstate/compile/_make_jaxpr.py +888 -888
  28. brainstate/compile/_make_jaxpr_test.py +156 -156
  29. brainstate/compile/_progress_bar.py +202 -202
  30. brainstate/compile/_unvmap.py +159 -159
  31. brainstate/compile/_util.py +147 -147
  32. brainstate/environ.py +563 -563
  33. brainstate/environ_test.py +62 -62
  34. brainstate/functional/__init__.py +27 -26
  35. brainstate/graph/__init__.py +29 -29
  36. brainstate/graph/_graph_node.py +244 -244
  37. brainstate/graph/_graph_node_test.py +73 -73
  38. brainstate/graph/_graph_operation.py +1738 -1738
  39. brainstate/graph/_graph_operation_test.py +563 -563
  40. brainstate/init/__init__.py +26 -26
  41. brainstate/init/_base.py +52 -52
  42. brainstate/init/_generic.py +244 -244
  43. brainstate/init/_random_inits.py +553 -553
  44. brainstate/init/_random_inits_test.py +149 -149
  45. brainstate/init/_regular_inits.py +105 -105
  46. brainstate/init/_regular_inits_test.py +50 -50
  47. brainstate/mixin.py +365 -363
  48. brainstate/mixin_test.py +77 -73
  49. brainstate/nn/__init__.py +135 -131
  50. brainstate/{functional → nn}/_activations.py +808 -813
  51. brainstate/{functional → nn}/_activations_test.py +331 -331
  52. brainstate/nn/_collective_ops.py +514 -514
  53. brainstate/nn/_collective_ops_test.py +43 -43
  54. brainstate/nn/_common.py +178 -178
  55. brainstate/nn/_conv.py +501 -501
  56. brainstate/nn/_conv_test.py +238 -238
  57. brainstate/nn/_delay.py +588 -502
  58. brainstate/nn/_delay_test.py +238 -184
  59. brainstate/nn/_dropout.py +426 -426
  60. brainstate/nn/_dropout_test.py +100 -100
  61. brainstate/nn/_dynamics.py +1343 -1343
  62. brainstate/nn/_dynamics_test.py +78 -78
  63. brainstate/nn/_elementwise.py +1119 -1119
  64. brainstate/nn/_elementwise_test.py +169 -169
  65. brainstate/nn/_embedding.py +58 -58
  66. brainstate/nn/_exp_euler.py +92 -92
  67. brainstate/nn/_exp_euler_test.py +35 -35
  68. brainstate/nn/_fixedprob.py +239 -239
  69. brainstate/nn/_fixedprob_test.py +114 -114
  70. brainstate/nn/_inputs.py +608 -608
  71. brainstate/nn/_linear.py +424 -424
  72. brainstate/nn/_linear_mv.py +83 -83
  73. brainstate/nn/_linear_mv_test.py +120 -120
  74. brainstate/nn/_linear_test.py +107 -107
  75. brainstate/nn/_ltp.py +28 -28
  76. brainstate/nn/_module.py +377 -377
  77. brainstate/nn/_module_test.py +40 -40
  78. brainstate/nn/_neuron.py +705 -705
  79. brainstate/nn/_neuron_test.py +161 -161
  80. brainstate/nn/_normalizations.py +975 -918
  81. brainstate/nn/_normalizations_test.py +73 -73
  82. brainstate/{functional → nn}/_others.py +46 -46
  83. brainstate/nn/_poolings.py +1177 -1177
  84. brainstate/nn/_poolings_test.py +217 -217
  85. brainstate/nn/_projection.py +486 -486
  86. brainstate/nn/_rate_rnns.py +554 -554
  87. brainstate/nn/_rate_rnns_test.py +63 -63
  88. brainstate/nn/_readout.py +209 -209
  89. brainstate/nn/_readout_test.py +53 -53
  90. brainstate/nn/_stp.py +236 -236
  91. brainstate/nn/_synapse.py +505 -505
  92. brainstate/nn/_synapse_test.py +131 -131
  93. brainstate/nn/_synaptic_projection.py +423 -423
  94. brainstate/nn/_synouts.py +162 -162
  95. brainstate/nn/_synouts_test.py +57 -57
  96. brainstate/nn/_utils.py +89 -89
  97. brainstate/nn/metrics.py +388 -388
  98. brainstate/optim/__init__.py +38 -38
  99. brainstate/optim/_base.py +64 -64
  100. brainstate/optim/_lr_scheduler.py +448 -448
  101. brainstate/optim/_lr_scheduler_test.py +50 -50
  102. brainstate/optim/_optax_optimizer.py +152 -152
  103. brainstate/optim/_optax_optimizer_test.py +53 -53
  104. brainstate/optim/_sgd_optimizer.py +1104 -1104
  105. brainstate/random/__init__.py +24 -24
  106. brainstate/random/_rand_funs.py +3616 -3616
  107. brainstate/random/_rand_funs_test.py +567 -567
  108. brainstate/random/_rand_seed.py +210 -210
  109. brainstate/random/_rand_seed_test.py +48 -48
  110. brainstate/random/_rand_state.py +1409 -1409
  111. brainstate/random/_random_for_unit.py +52 -52
  112. brainstate/surrogate.py +1957 -1957
  113. brainstate/transform.py +23 -23
  114. brainstate/typing.py +304 -304
  115. brainstate/util/__init__.py +50 -50
  116. brainstate/util/caller.py +98 -98
  117. brainstate/util/error.py +55 -55
  118. brainstate/util/filter.py +469 -469
  119. brainstate/util/others.py +540 -540
  120. brainstate/util/pretty_pytree.py +945 -945
  121. brainstate/util/pretty_pytree_test.py +159 -159
  122. brainstate/util/pretty_repr.py +328 -328
  123. brainstate/util/pretty_table.py +2954 -2954
  124. brainstate/util/scaling.py +258 -258
  125. brainstate/util/struct.py +523 -523
  126. {brainstate-0.1.8.dist-info → brainstate-0.1.10.dist-info}/METADATA +91 -99
  127. brainstate-0.1.10.dist-info/RECORD +130 -0
  128. {brainstate-0.1.8.dist-info → brainstate-0.1.10.dist-info}/WHEEL +1 -1
  129. {brainstate-0.1.8.dist-info → brainstate-0.1.10.dist-info/licenses}/LICENSE +202 -202
  130. brainstate/functional/_normalization.py +0 -81
  131. brainstate/functional/_spikes.py +0 -204
  132. brainstate-0.1.8.dist-info/RECORD +0 -132
  133. {brainstate-0.1.8.dist-info → brainstate-0.1.10.dist-info}/top_level.txt +0 -0
brainstate/__init__.py CHANGED
@@ -1,51 +1,58 @@
1
- # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
2
- #
3
- # Licensed under the Apache License, Version 2.0 (the "License");
4
- # you may not use this file except in compliance with the License.
5
- # You may obtain a copy of the License at
6
- #
7
- # http://www.apache.org/licenses/LICENSE-2.0
8
- #
9
- # Unless required by applicable law or agreed to in writing, software
10
- # distributed under the License is distributed on an "AS IS" BASIS,
11
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
- # See the License for the specific language governing permissions and
13
- # limitations under the License.
14
- # ==============================================================================
15
-
16
- """
17
- A ``State``-based Transformation System for Program Compilation and Augmentation
18
- """
19
-
20
- __version__ = "0.1.8"
21
-
22
- from . import augment
23
- from . import compile
24
- from . import environ
25
- from . import functional
26
- from . import graph
27
- from . import init
28
- from . import mixin
29
- from . import nn
30
- from . import optim
31
- from . import random
32
- from . import surrogate
33
- from . import transform
34
- from . import typing
35
- from . import util
36
- from ._state import *
37
- from ._state import __all__ as _state_all
38
-
39
- __all__ = (
40
- [
41
- 'augment', 'compile', 'environ', 'functional',
42
- 'graph', 'init', 'mixin', 'nn', 'optim', 'random',
43
- 'surrogate', 'typing', 'util',
44
- # deprecated
45
- 'transform',
46
- ] +
47
- _state_all
48
- )
49
-
50
- # ----------------------- #
51
- del _state_all
1
+ # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
2
+ #
3
+ # Licensed under the Apache License, Version 2.0 (the "License");
4
+ # you may not use this file except in compliance with the License.
5
+ # You may obtain a copy of the License at
6
+ #
7
+ # http://www.apache.org/licenses/LICENSE-2.0
8
+ #
9
+ # Unless required by applicable law or agreed to in writing, software
10
+ # distributed under the License is distributed on an "AS IS" BASIS,
11
+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
+ # See the License for the specific language governing permissions and
13
+ # limitations under the License.
14
+ # ==============================================================================
15
+
16
+ """
17
+ A ``State``-based Transformation System for Program Compilation and Augmentation
18
+ """
19
+
20
+ __version__ = "0.1.10"
21
+
22
+ from . import augment
23
+ from . import compile
24
+ from . import environ
25
+ from . import functional
26
+ from . import graph
27
+ from . import init
28
+ from . import mixin
29
+ from . import nn
30
+ from . import optim
31
+ from . import random
32
+ from . import surrogate
33
+ from . import transform
34
+ from . import typing
35
+ from . import util
36
+ from ._state import *
37
+ from ._state import __all__ as _state_all
38
+
39
+ __all__ = [
40
+ 'augment',
41
+ 'compile',
42
+ 'environ',
43
+ 'functional',
44
+ 'graph',
45
+ 'init',
46
+ 'mixin',
47
+ 'nn',
48
+ 'optim',
49
+ 'random',
50
+ 'surrogate',
51
+ 'typing',
52
+ 'util',
53
+ 'transform',
54
+ ]
55
+ __all__ = __all__ + _state_all
56
+
57
+ # ----------------------- #
58
+ del _state_all
@@ -1,148 +1,148 @@
1
- # Copyright 2025 BDP Ecosystem Limited. All Rights Reserved.
2
- #
3
- # Licensed under the Apache License, Version 2.0 (the "License");
4
- # you may not use this file except in compliance with the License.
5
- # You may obtain a copy of the License at
6
- #
7
- # http://www.apache.org/licenses/LICENSE-2.0
8
- #
9
- # Unless required by applicable law or agreed to in writing, software
10
- # distributed under the License is distributed on an "AS IS" BASIS,
11
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
- # See the License for the specific language governing permissions and
13
- # limitations under the License.
14
- # ==============================================================================
15
-
16
- # -*- coding: utf-8 -*-
17
-
18
-
19
- from contextlib import contextmanager
20
- from functools import partial
21
- from typing import Iterable, Hashable, TypeVar, Callable
22
-
23
- import jax
24
-
25
- __all__ = [
26
- 'ClosedJaxpr',
27
- 'Primitive',
28
- 'extend_axis_env_nd',
29
- 'jaxpr_as_fun',
30
- 'get_aval',
31
- 'Tracer',
32
- 'to_concrete_aval',
33
- 'safe_map',
34
- 'safe_zip',
35
- 'unzip2',
36
- 'wraps',
37
- 'Device',
38
- 'wrap_init',
39
- ]
40
-
41
- T = TypeVar("T")
42
- T1 = TypeVar("T1")
43
- T2 = TypeVar("T2")
44
- T3 = TypeVar("T3")
45
-
46
- from saiunit._compatible_import import wrap_init
47
-
48
- from jax.core import get_aval, Tracer
49
-
50
- if jax.__version_info__ < (0, 5, 0):
51
- from jax.lib.xla_client import Device
52
- else:
53
- from jax import Device
54
-
55
- if jax.__version_info__ < (0, 4, 38):
56
- from jax.core import ClosedJaxpr, extend_axis_env_nd, Primitive, jaxpr_as_fun
57
- else:
58
- from jax.extend.core import ClosedJaxpr, Primitive, jaxpr_as_fun
59
- from jax.core import trace_ctx
60
-
61
-
62
- @contextmanager
63
- def extend_axis_env_nd(name_size_pairs: Iterable[tuple[Hashable, int]]):
64
- prev = trace_ctx.axis_env
65
- try:
66
- trace_ctx.set_axis_env(prev.extend_pure(name_size_pairs))
67
- yield
68
- finally:
69
- trace_ctx.set_axis_env(prev)
70
-
71
- if jax.__version_info__ < (0, 6, 0):
72
- from jax.util import safe_map, safe_zip, unzip2, wraps
73
-
74
- else:
75
- def safe_map(f, *args):
76
- args = list(map(list, args))
77
- n = len(args[0])
78
- for arg in args[1:]:
79
- assert len(arg) == n, f'length mismatch: {list(map(len, args))}'
80
- return list(map(f, *args))
81
-
82
-
83
- def safe_zip(*args):
84
- args = list(map(list, args))
85
- n = len(args[0])
86
- for arg in args[1:]:
87
- assert len(arg) == n, f'length mismatch: {list(map(len, args))}'
88
- return list(zip(*args))
89
-
90
-
91
- def unzip2(xys: Iterable[tuple[T1, T2]]) -> tuple[tuple[T1, ...], tuple[T2, ...]]:
92
- """Unzip sequence of length-2 tuples into two tuples."""
93
- # Note: we deliberately don't use zip(*xys) because it is lazily evaluated,
94
- # is too permissive about inputs, and does not guarantee a length-2 output.
95
- xs: list[T1] = []
96
- ys: list[T2] = []
97
- for x, y in xys:
98
- xs.append(x)
99
- ys.append(y)
100
- return tuple(xs), tuple(ys)
101
-
102
-
103
- def fun_name(fun: Callable):
104
- name = getattr(fun, "__name__", None)
105
- if name is not None:
106
- return name
107
- if isinstance(fun, partial):
108
- return fun_name(fun.func)
109
- else:
110
- return "<unnamed function>"
111
-
112
-
113
- def wraps(
114
- wrapped: Callable,
115
- namestr: str | None = None,
116
- docstr: str | None = None,
117
- **kwargs,
118
- ) -> Callable[[T], T]:
119
- """
120
- Like functools.wraps, but with finer-grained control over the name and docstring
121
- of the resulting function.
122
- """
123
-
124
- def wrapper(fun: T) -> T:
125
- try:
126
- name = fun_name(wrapped)
127
- doc = getattr(wrapped, "__doc__", "") or ""
128
- fun.__dict__.update(getattr(wrapped, "__dict__", {}))
129
- fun.__annotations__ = getattr(wrapped, "__annotations__", {})
130
- fun.__name__ = name if namestr is None else namestr.format(fun=name)
131
- fun.__module__ = getattr(wrapped, "__module__", "<unknown module>")
132
- fun.__doc__ = (doc if docstr is None
133
- else docstr.format(fun=name, doc=doc, **kwargs))
134
- fun.__qualname__ = getattr(wrapped, "__qualname__", fun.__name__)
135
- fun.__wrapped__ = wrapped
136
- except Exception:
137
- pass
138
- return fun
139
-
140
- return wrapper
141
-
142
-
143
- def to_concrete_aval(aval):
144
- aval = get_aval(aval)
145
- if isinstance(aval, Tracer):
146
- return aval.to_concrete_value()
147
- return aval
148
-
1
+ # Copyright 2025 BDP Ecosystem Limited. All Rights Reserved.
2
+ #
3
+ # Licensed under the Apache License, Version 2.0 (the "License");
4
+ # you may not use this file except in compliance with the License.
5
+ # You may obtain a copy of the License at
6
+ #
7
+ # http://www.apache.org/licenses/LICENSE-2.0
8
+ #
9
+ # Unless required by applicable law or agreed to in writing, software
10
+ # distributed under the License is distributed on an "AS IS" BASIS,
11
+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12
+ # See the License for the specific language governing permissions and
13
+ # limitations under the License.
14
+ # ==============================================================================
15
+
16
+ # -*- coding: utf-8 -*-
17
+
18
+
19
+ from contextlib import contextmanager
20
+ from functools import partial
21
+ from typing import Iterable, Hashable, TypeVar, Callable
22
+
23
+ import jax
24
+
25
+ __all__ = [
26
+ 'ClosedJaxpr',
27
+ 'Primitive',
28
+ 'extend_axis_env_nd',
29
+ 'jaxpr_as_fun',
30
+ 'get_aval',
31
+ 'Tracer',
32
+ 'to_concrete_aval',
33
+ 'safe_map',
34
+ 'safe_zip',
35
+ 'unzip2',
36
+ 'wraps',
37
+ 'Device',
38
+ 'wrap_init',
39
+ ]
40
+
41
+ T = TypeVar("T")
42
+ T1 = TypeVar("T1")
43
+ T2 = TypeVar("T2")
44
+ T3 = TypeVar("T3")
45
+
46
+ from saiunit._compatible_import import wrap_init
47
+
48
+ from jax.core import get_aval, Tracer
49
+
50
+ if jax.__version_info__ < (0, 5, 0):
51
+ from jax.lib.xla_client import Device
52
+ else:
53
+ from jax import Device
54
+
55
+ if jax.__version_info__ < (0, 4, 38):
56
+ from jax.core import ClosedJaxpr, extend_axis_env_nd, Primitive, jaxpr_as_fun
57
+ else:
58
+ from jax.extend.core import ClosedJaxpr, Primitive, jaxpr_as_fun
59
+ from jax.core import trace_ctx
60
+
61
+
62
+ @contextmanager
63
+ def extend_axis_env_nd(name_size_pairs: Iterable[tuple[Hashable, int]]):
64
+ prev = trace_ctx.axis_env
65
+ try:
66
+ trace_ctx.set_axis_env(prev.extend_pure(name_size_pairs))
67
+ yield
68
+ finally:
69
+ trace_ctx.set_axis_env(prev)
70
+
71
+ if jax.__version_info__ < (0, 6, 0):
72
+ from jax.util import safe_map, safe_zip, unzip2, wraps
73
+
74
+ else:
75
+ def safe_map(f, *args):
76
+ args = list(map(list, args))
77
+ n = len(args[0])
78
+ for arg in args[1:]:
79
+ assert len(arg) == n, f'length mismatch: {list(map(len, args))}'
80
+ return list(map(f, *args))
81
+
82
+
83
+ def safe_zip(*args):
84
+ args = list(map(list, args))
85
+ n = len(args[0])
86
+ for arg in args[1:]:
87
+ assert len(arg) == n, f'length mismatch: {list(map(len, args))}'
88
+ return list(zip(*args))
89
+
90
+
91
+ def unzip2(xys: Iterable[tuple[T1, T2]]) -> tuple[tuple[T1, ...], tuple[T2, ...]]:
92
+ """Unzip sequence of length-2 tuples into two tuples."""
93
+ # Note: we deliberately don't use zip(*xys) because it is lazily evaluated,
94
+ # is too permissive about inputs, and does not guarantee a length-2 output.
95
+ xs: list[T1] = []
96
+ ys: list[T2] = []
97
+ for x, y in xys:
98
+ xs.append(x)
99
+ ys.append(y)
100
+ return tuple(xs), tuple(ys)
101
+
102
+
103
+ def fun_name(fun: Callable):
104
+ name = getattr(fun, "__name__", None)
105
+ if name is not None:
106
+ return name
107
+ if isinstance(fun, partial):
108
+ return fun_name(fun.func)
109
+ else:
110
+ return "<unnamed function>"
111
+
112
+
113
+ def wraps(
114
+ wrapped: Callable,
115
+ namestr: str | None = None,
116
+ docstr: str | None = None,
117
+ **kwargs,
118
+ ) -> Callable[[T], T]:
119
+ """
120
+ Like functools.wraps, but with finer-grained control over the name and docstring
121
+ of the resulting function.
122
+ """
123
+
124
+ def wrapper(fun: T) -> T:
125
+ try:
126
+ name = fun_name(wrapped)
127
+ doc = getattr(wrapped, "__doc__", "") or ""
128
+ fun.__dict__.update(getattr(wrapped, "__dict__", {}))
129
+ fun.__annotations__ = getattr(wrapped, "__annotations__", {})
130
+ fun.__name__ = name if namestr is None else namestr.format(fun=name)
131
+ fun.__module__ = getattr(wrapped, "__module__", "<unknown module>")
132
+ fun.__doc__ = (doc if docstr is None
133
+ else docstr.format(fun=name, doc=doc, **kwargs))
134
+ fun.__qualname__ = getattr(wrapped, "__qualname__", fun.__name__)
135
+ fun.__wrapped__ = wrapped
136
+ except Exception:
137
+ pass
138
+ return fun
139
+
140
+ return wrapper
141
+
142
+
143
+ def to_concrete_aval(aval):
144
+ aval = get_aval(aval)
145
+ if isinstance(aval, Tracer):
146
+ return aval.to_concrete_value()
147
+ return aval
148
+