memorylink 1.0.0

package/docs/MEMORYLINK_CURSOR_AI_DEVELOPMENT_GUIDE.md

@@ -0,0 +1,1092 @@
+# 🎯 FINAL DEVELOPMENT PLAN FOR CURSOR AI
+
+**Buddy, I understand! You want me to explain to Cursor AI:**
+1. What we're building (MemoryLink v1.0)
+2. What changed from original plan
+3. Why these changes matter
+4. What Cursor should do next (step-by-step)
+
+---
+
+# 📋 MEMORYLINK v1.0 - CURSOR AI DEVELOPMENT GUIDE
+
+**Developer:** Cursor AI  
+**Chief Engineer:** Claude (providing guidance)  
+**Timeline:** 6 days  
+**Status:** Ready to build
+
+---
+
+## 🎯 WHAT YOU'RE BUILDING
+
+**MemoryLink v1.0** is a local, Git-native memory system for AI coding assistants (like you, Cursor!).
+
+### The Problem It Solves
+
+**Without MemoryLink:**
+```
+❌ You forget context between sessions
+❌ You can't share memory with Claude/ChatGPT
+❌ You repeat failed solutions
+❌ You accidentally edit protected files
+❌ No audit trail of your changes
+```
+
+**With MemoryLink:**
+```
+✅ Persistent memory across sessions
+✅ Universal memory (works with all AIs)
+✅ Learn from mistakes (SUCCESS/FAILED tracking)
+✅ Protected files (can't touch .env, auth.ts, etc)
+✅ Complete audit trail (who changed what, when, why)
+```
+
+---
+
+## 📦 WHAT YOU'LL CREATE
+
+### Repository Structure
+
+```
+my-project/
+├── src/
+├── docs/
+│   ├── architecture.md
+│   └── api-spec.md
+├── .memorylink/
+│   ├── protected.txt      # Files AI cannot touch
+│   ├── memory.log         # JSONL: Project knowledge
+│   ├── changes.log        # JSONL: Audit trail
+│   ├── learnings.log      # JSONL: What works/fails
+│   └── config.json        # Project settings
+└── package.json
+```
+
+### The 4 Core Files
+
+1. **protected.txt** (Plain text)
+   ```
+   .env
+   config/production.json
+   src/auth/**
+   *.pem
+   ```
+
+2. **memory.log** (JSONL)
+   ```json
+   {"id":"mem_001","ts":"2025-12-12T10:00:00Z","agent":"cursor","type":"decision","details":"Use JWT for auth","tags":["auth","api"],"status":"ACTIVE"}
+   ```
+
+3. **changes.log** (JSONL)
+   ```json
+   {"id":"chg_001","ts":"2025-12-12T10:00:00Z","agent":"cursor","user":"alice","file":"src/api.ts","action":"edited","reason":"Added null check"}
+   ```
+
+4. **learnings.log** (JSONL)
+   ```json
+   {"id":"lrn_001","ts":"2025-12-12T10:00:00Z","agent":"cursor","problem":"API timeout","solution":"Add DB index","outcome":"SUCCESS","reason":"Latency 5s→100ms"}
+   ```
+
+---
+
+## 🔄 WHAT CHANGED FROM ORIGINAL PLAN
+
+### CHANGE 1: Pipe Format → JSONL Format
+
+**BEFORE (Original Plan):**
+```
+# memory.log (pipe-delimited)
+2025-12-12T10:00:00Z|cursor|decision|Use JWT for auth|auth,api
+```
+
+**AFTER (New Plan):**
+```json
+{"id":"mem_001","ts":"2025-12-12T10:00:00Z","agent":"cursor","type":"decision","details":"Use JWT for auth","tags":["auth","api"],"status":"ACTIVE"}
+```
+
+**WHY THIS CHANGE:**
+```
+❌ Pipe format problems:
+- Breaks when | appears in text
+- Hard to add new fields (breaks old parsers)
+- No validation
+- Escaping nightmare
+
+✅ JSONL benefits:
+- Robust parsing (JSON.parse)
+- Easy to add fields (backward compatible)
+- Built-in validation
+- No escaping issues
+- Standard format
+```
+
+**WHAT YOU DO:**
+- Write JSON objects, one per line
+- Use `JSON.stringify(entry) + '\n'`
+- Parse with `JSON.parse(line)`
+
+---
+
+### CHANGE 2: No Locking → File Locking
+
+**BEFORE (Original Plan):**
+```typescript
+// Just append
+await appendFile('memory.log', data);
+```
+
+**AFTER (New Plan):**
+```typescript
+// Acquire lock, append, release
+const lock = await acquireLock('memory.log.lock');
+try {
+  await appendFile('memory.log', data);
+} finally {
+  await lock.release();
+}
+```
+
+**WHY THIS CHANGE:**
+```
+❌ Without locking:
+Developer writes: {"id":"mem_001"
+Cursor writes:    {"id":"mem_002","ts":"..."}
+Result:           {"id":"mem_001"{"id":"mem_002","ts":"..."}
+                  ↑ CORRUPTED LOG
+
+✅ With locking:
+Developer: Acquire lock → write → release
+Cursor: Wait for lock → write → release
+Result: Both entries written correctly
+```
+
+**WHAT YOU DO:**
+```typescript
+// 1. Create lock file atomically
+const lock = await acquireFileLock('memory.log.lock');
+
+// 2. Write to log
+await appendFile('memory.log', JSON.stringify(entry) + '\n');
+
+// 3. Release lock
+await lock.release();
+
+// 4. If lock times out (10 retries), throw error
+```
+
+---
+
+### CHANGE 3: Simple List → Search + Filters
+
+**BEFORE (Original Plan):**
+```bash
+memorylink memories  # Show all entries
+```
+
+**AFTER (New Plan):**
+```bash
+# Search by keyword
+memorylink search "authentication"
+
+# Filter by tag
+memorylink memories --tag=auth
+
+# Filter by date
+memorylink memories --since 7d
+
+# Filter by status
+memorylink learnings --failed-only
+
+# Combine filters
+memorylink search "timeout" --tag=api --since 2w --limit 10
+```
+
+**WHY THIS CHANGE:**
+```
+❌ Without search:
+Day 1: 10 entries → easy to scan
+Day 30: 200 entries → hard to find anything
+Day 90: 1000+ entries → completely unusable
+User abandons tool
+
+✅ With search:
+Day 90: 1000+ entries
+Search "auth" → 15 relevant entries in 0.1s
+User finds what they need instantly
+```
+
+**WHAT YOU DO:**
+```typescript
+async function search(keyword: string, filters: Filters) {
+  // 1. Read all entries
+  const entries = await readLog('memory.log');
+  
+  // 2. Filter by keyword
+  let results = entries.filter(e => 
+    e.details.includes(keyword) ||
+    e.tags.some(t => t.includes(keyword))
+  );
+  
+  // 3. Apply filters
+  if (filters.tag) {
+    results = results.filter(e => e.tags.includes(filters.tag));
+  }
+  
+  if (filters.since) {
+    const cutoff = parseDuration(filters.since); // "7d" → date
+    results = results.filter(e => new Date(e.ts) > cutoff);
+  }
+  
+  if (filters.limit) {
+    results = results.slice(0, filters.limit);
+  }
+  
+  // 4. Return results
+  return results;
+}
+```
+
+---
+
+### CHANGE 4: Basic Output → Formatted Context
+
+**BEFORE (Original Plan):**
+```bash
+memorylink get-context
+# Output:
+mem_001|2025-12-12|Use JWT|auth,api
+mem_002|2025-12-11|Add pagination|api
+```
+
+**AFTER (New Plan):**
+```bash
+# For Cursor AI
+memorylink prompt cursor --tag=auth
+
+# Output (ready to paste):
+Context for Cursor AI:
+
+[DECISION] Use JWT authentication with refresh tokens
+Tags: auth, api, security
+Date: 2025-12-12
+
+[DOC_REF] Authentication flow documentation
+See: docs/auth-flow.md
+Tags: auth, docs
+
+Ready to assist with authentication tasks!
+```
+
+**WHY THIS CHANGE:**
+```
+❌ Without formatting:
+1. User runs: get-context
+2. Copy raw JSONL
+3. Paste to Cursor
+4. Cursor: "Let me parse this..."
+5. Friction = user annoyed
+
+✅ With formatting:
+1. User runs: prompt cursor --tag=auth
+2. Copy formatted text
+3. Paste to Cursor
+4. Cursor: "Got it! I see you use JWT..."
+5. Instant context = happy user
+```
+
+**WHAT YOU DO:**
+```typescript
+async function formatForCursor(entries: Entry[]) {
+  let output = 'Context for Cursor AI:\n\n';
+  
+  for (const entry of entries) {
+    output += `[${entry.type.toUpperCase()}] ${entry.details}\n`;
+    if (entry.tags.length > 0) {
+      output += `Tags: ${entry.tags.join(', ')}\n`;
+    }
+    if (entry.path) {
+      output += `See: ${entry.path}\n`;
+    }
+    output += '\n';
+  }
+  
+  output += 'Ready to assist!\n';
+  return output;
+}
+```
+
+---
+
+### CHANGE 5: Basic Validation → Doctor Command
+
+**BEFORE (Original Plan):**
+```bash
+memorylink status  # Show basic info
+```
+
+**AFTER (New Plan):**
+```bash
+memorylink doctor
+
+# Output:
+✅ JSONL validation: All logs valid
+✅ File locking: No stale locks
+⚠️  Size warning: memory.log is 2.5MB (consider archiving)
+❌ SECRET DETECTED: memory.log line 47 contains API key
+❌ UNPROTECTED: .env is not in protected.txt
+⚠️  Hash mismatch: docs/api-spec.md changed since doc_ref
+
+Actions required:
+1. Run: memorylink delete-memory mem_047 --secure
+2. Run: memorylink protect .env
+3. Update doc_ref or accept changes
+```
+
+**WHY THIS CHANGE:**
+```
+❌ Without doctor:
+- User commits secret to Git (security breach)
+- Logs corrupted (lost data)
+- .env unprotected (Cursor edits it, production breaks)
+- No way to know something is wrong
+
+✅ With doctor:
+- Catches secrets before Git commit
+- Validates log integrity
+- Warns about unprotected files
+- User fixes issues proactively
+```
+
+**WHAT YOU DO:**
+```typescript
+async function runDoctor() {
+  const issues = [];
+  
+  // 1. Validate JSONL
+  for (const log of ['memory.log', 'changes.log', 'learnings.log']) {
+    const lines = await readLines(log);
+    for (let i = 0; i < lines.length; i++) {
+      try {
+        JSON.parse(lines[i]);
+      } catch (err) {
+        issues.push(`${log}:${i+1} - Invalid JSON`);
+      }
+    }
+  }
+  
+  // 2. Check for secrets
+  const secretPatterns = [
+    /sk_live_[A-Za-z0-9]+/,
+    /AKIA[A-Z0-9]{16}/,
+    /API_KEY\s*=\s*['"]/,
+  ];
+  
+  for (const entry of await readLog('memory.log')) {
+    for (const pattern of secretPatterns) {
+      if (pattern.test(entry.details)) {
+        issues.push(`SECRET in ${entry.id}: ${entry.details.slice(0,30)}...`);
+      }
+    }
+  }
+  
+  // 3. Check protected files
+  const protectedFiles = await readProtectedFiles();
+  if (!protectedFiles.includes('.env')) {
+    issues.push('WARNING: .env is not protected');
+  }
+  
+  // 4. Report
+  return issues;
+}
+```
+
+---
+
+## 🛠️ WHAT YOU BUILD (6-DAY PLAN)
+
+### Day 1: JSONL Conversion (6 hours)
+
+**Task: Convert from pipe format to JSONL**
+
+**Files to modify:**
+```
+src/
+├── memory.ts       # Update write/read for JSONL
+├── learning.ts     # Update write/read for JSONL
+├── change.ts       # Update write/read for JSONL
+└── types.ts        # Update interfaces
+```
+
+**Step-by-step:**
+
+```typescript
+// 1. Update types.ts
+interface MemoryEntry {
+  id: string;              // UUID v4
+  ts: string;              // ISO 8601
+  project: string;         // Project name
+  agent: string;           // cursor, claude, user, etc
+  type: string;            // note, decision, doc_ref, etc
+  details: string;         // Main content
+  tags: string[];          // Searchable keywords
+  status: string;          // ACTIVE, DEPRECATED, DELETED
+  path?: string;           // For doc_ref
+  hash?: string;           // For doc_ref
+  replaces_id?: string;    // For updates
+}
+
+// 2. Update memory.ts write function
+async write(entry: MemoryEntry) {
+  // Add ID and timestamp
+  entry.id = uuidv4();
+  entry.ts = new Date().toISOString();
+  entry.project = this.getProjectName();
+  entry.status = 'ACTIVE';
+  
+  // Write JSONL
+  const line = JSON.stringify(entry) + '\n';
+  await appendFile(this.logPath, line);
+}
+
+// 3. Update memory.ts read function
+async read(): Promise<MemoryEntry[]> {
+  const content = await readFile(this.logPath, 'utf-8');
+  const lines = content.split('\n').filter(l => l.trim());
+  
+  const entries: MemoryEntry[] = [];
+  for (let i = 0; i < lines.length; i++) {
+    try {
+      const entry = JSON.parse(lines[i]);
+      entries.push(entry);
+    } catch (err) {
+      console.warn(`Line ${i+1}: Invalid JSON - ${err.message}`);
+    }
+  }
+  
+  return entries;
+}
+```
+
+**Test:**
+```typescript
+// Create entry
+await memory.write({
+  agent: 'cursor',
+  type: 'decision',
+  details: 'Use JWT for auth',
+  tags: ['auth', 'api']
+});
+
+// Read back
+const entries = await memory.read();
+console.log(entries[0].id); // Should be UUID
+console.log(entries[0].ts); // Should be ISO 8601
+```
+
+---
+
+### Day 2: File Locking (4 hours)
+
+**Task: Add concurrent write protection**
+
+**Create new file:**
+```
+src/lock.ts  # File locking utility
+```
+
+**Implementation:**
+
+```typescript
+// src/lock.ts
+import { open, unlink } from 'fs/promises';
+
+export class FileLock {
+  constructor(private lockPath: string) {}
+  
+  async acquire(maxRetries = 10): Promise<() => Promise<void>> {
+    for (let i = 0; i < maxRetries; i++) {
+      try {
+        // Create lock file (exclusive)
+        const fd = await open(this.lockPath, 'wx');
+        
+        // Return release function
+        return async () => {
+          await fd.close();
+          await unlink(this.lockPath);
+        };
+      } catch (err) {
+        if (err.code !== 'EEXIST') throw err;
+        
+        // Wait and retry
+        await new Promise(r => setTimeout(r, 100));
+      }
+    }
+    
+    throw new Error(`Could not acquire lock: ${this.lockPath}`);
+  }
+}
+
+// Usage in memory.ts
+async write(entry: MemoryEntry) {
+  const lock = new FileLock(this.logPath + '.lock');
+  const release = await lock.acquire();
+  
+  try {
+    // Add metadata
+    entry.id = uuidv4();
+    entry.ts = new Date().toISOString();
+    
+    // Write JSONL
+    await appendFile(this.logPath, JSON.stringify(entry) + '\n');
+  } finally {
+    await release();
+  }
+}
+```
+
+**Test:**
+```typescript
+// Concurrent write test
+const promises = [];
+for (let i = 0; i < 10; i++) {
+  promises.push(memory.write({
+    agent: 'test',
+    type: 'note',
+    details: `Test ${i}`,
+    tags: ['test']
+  }));
+}
+
+await Promise.all(promises);
+
+// Verify: All 10 entries should be written correctly
+const entries = await memory.read();
+assert(entries.length === 10);
+assert(entries.every(e => e.id && e.ts));
+```
+
+---
+
+### Day 3: Search + Filters (6 hours)
+
+**Task: Make logs searchable**
+
+**Create new file:**
+```
+src/search.ts  # Search and filter logic
+```
+
+**Implementation:**
+
+```typescript
+// src/search.ts
+interface SearchFilters {
+  keyword?: string;
+  tag?: string;
+  since?: string;      // "7d", "2w", "1m"
+  status?: string;     // "ACTIVE", "DEPRECATED", "DELETED"
+  type?: string;
+  limit?: number;
+}
+
+export class SearchEngine {
+  async search(log: string, filters: SearchFilters): Promise<Entry[]> {
+    // 1. Read all entries
+    let entries = await this.readLog(log);
+    
+    // 2. Filter by keyword
+    if (filters.keyword) {
+      const kw = filters.keyword.toLowerCase();
+      entries = entries.filter(e =>
+        e.details.toLowerCase().includes(kw) ||
+        e.tags.some(t => t.toLowerCase().includes(kw))
+      );
+    }
+    
+    // 3. Filter by tag
+    if (filters.tag) {
+      entries = entries.filter(e => e.tags.includes(filters.tag));
+    }
+    
+    // 4. Filter by date
+    if (filters.since) {
+      const cutoff = this.parseDuration(filters.since);
+      entries = entries.filter(e => new Date(e.ts) > cutoff);
+    }
+    
+    // 5. Filter by status (default: ACTIVE only)
+    const status = filters.status || 'ACTIVE';
+    entries = entries.filter(e => e.status === status);
+    
+    // 6. Filter by type
+    if (filters.type) {
+      entries = entries.filter(e => e.type === filters.type);
+    }
+    
+    // 7. Limit results
+    if (filters.limit) {
+      entries = entries.slice(0, filters.limit);
+    }
+    
+    return entries;
+  }
+  
+  private parseDuration(duration: string): Date {
+    const match = duration.match(/^(\d+)([dwmy])$/);
+    if (!match) throw new Error(`Invalid duration: ${duration}`);
+    
+    const [, amount, unit] = match;
+    const now = new Date();
+    
+    switch (unit) {
+      case 'd': return new Date(now.getTime() - parseInt(amount) * 24 * 60 * 60 * 1000);
+      case 'w': return new Date(now.getTime() - parseInt(amount) * 7 * 24 * 60 * 60 * 1000);
+      case 'm': return new Date(now.getTime() - parseInt(amount) * 30 * 24 * 60 * 60 * 1000);
+      case 'y': return new Date(now.getTime() - parseInt(amount) * 365 * 24 * 60 * 60 * 1000);
+    }
+  }
+}
+
+// Add to CLI (src/cli.ts)
+program
+  .command('search <keyword>')
+  .option('--tag <tag>')
+  .option('--since <duration>')
+  .option('--limit <n>', parseInt)
+  .action(async (keyword, options) => {
+    const search = new SearchEngine();
+    const results = await search.search('memory.log', {
+      keyword,
+      ...options
+    });
+    
+    for (const entry of results) {
+      console.log(`[${entry.type}] ${entry.details}`);
+      console.log(`  Tags: ${entry.tags.join(', ')}`);
+      console.log(`  Date: ${entry.ts}\n`);
+    }
+  });
+```
+
+**Test:**
+```bash
+# Add test data
+memorylink memory "Use JWT for auth" --tags auth,api
+memorylink memory "Add pagination" --tags api,performance
+memorylink memory "Implement caching" --tags performance,redis
+
+# Test search
+memorylink search "auth"
+# Should show: JWT entry
+
+memorylink search "performance" --limit 1
+# Should show: 1 entry
+
+memorylink memories --tag=api --since 1d
+# Should show: 2 entries (JWT, pagination)
+```
+
+---
+
+### Day 4: Formatted Output (4 hours)
+
+**Task: Generate AI-friendly context**
+
+**Create new file:**
+```
+src/formatter.ts  # Format output for different AIs
+```
+
+**Implementation:**
+
+```typescript
+// src/formatter.ts
+export class ContextFormatter {
+  formatForCursor(entries: Entry[]): string {
+    let output = '📋 Context for Cursor AI\n\n';
+    
+    for (const entry of entries) {
+      output += `## [${entry.type.toUpperCase()}] ${entry.details}\n`;
+      output += `**Tags:** ${entry.tags.join(', ')}\n`;
+      output += `**Date:** ${this.formatDate(entry.ts)}\n`;
+      
+      if (entry.path) {
+        output += `**Reference:** ${entry.path}\n`;
+      }
+      
+      output += '\n';
+    }
+    
+    return output;
+  }
+  
+  formatForClaude(entries: Entry[]): string {
+    let output = 'Project Context:\n\n';
+    
+    for (const entry of entries) {
+      if (entry.type === 'decision') {
+        output += `✓ ${entry.details}\n`;
+      } else if (entry.type === 'doc_ref') {
+        output += `→ See ${entry.path}\n`;
+      } else {
+        output += `• ${entry.details}\n`;
+      }
+    }
+    
+    return output;
+  }
+  
+  formatRaw(entries: Entry[]): string {
+    return entries.map(e => JSON.stringify(e)).join('\n');
+  }
+}
+
+// Add to CLI
+program
+  .command('prompt <tool>')
+  .option('--tag <tag>')
+  .option('--since <duration>')
+  .action(async (tool, options) => {
+    const search = new SearchEngine();
+    const entries = await search.search('memory.log', options);
+    
+    const formatter = new ContextFormatter();
+    let output;
+    
+    switch (tool) {
+      case 'cursor':
+        output = formatter.formatForCursor(entries);
+        break;
+      case 'claude':
+        output = formatter.formatForClaude(entries);
+        break;
+      default:
+        output = formatter.formatRaw(entries);
+    }
+    
+    console.log(output);
+  });
+```
+
+**Test:**
+```bash
+# Add some memories
+memorylink memory "Use JWT for auth" --tags auth,decision
+memorylink memory "API spec in docs/api.md" --doc docs/api.md --tags api,docs
+
+# Test formatting
+memorylink prompt cursor --tag=auth
+# Should output Cursor-friendly format
+
+memorylink prompt claude --tag=api
+# Should output Claude-friendly format
+```
+
+---
+
+### Day 5: Doctor Command (6 hours)
+
+**Task: Comprehensive validation**
+
+**Create new file:**
+```
+src/doctor.ts  # Health checks
+```
+
+**Implementation:**
+
+```typescript
+// src/doctor.ts
+export class Doctor {
+  async runChecks(): Promise<Issue[]> {
+    const issues: Issue[] = [];
+    
+    // 1. Validate JSONL
+    issues.push(...await this.validateJSONL());
+    
+    // 2. Check locks
+    issues.push(...await this.checkLocks());
+    
+    // 3. Scan secrets
+    issues.push(...await this.scanSecrets());
+    
+    // 4. Check protected files
+    issues.push(...await this.checkProtectedFiles());
+    
+    // 5. Check doc_ref integrity
+    issues.push(...await this.checkDocRefs());
+    
+    // 6. Check size
+    issues.push(...await this.checkSize());
+    
+    return issues;
+  }
+  
+  private async validateJSONL(): Promise<Issue[]> {
+    const issues: Issue[] = [];
+    
+    for (const log of ['memory.log', 'changes.log', 'learnings.log']) {
+      const lines = await readLines(`.memorylink/${log}`);
+      
+      for (let i = 0; i < lines.length; i++) {
+        try {
+          const entry = JSON.parse(lines[i]);
+          
+          // Check required fields
+          if (!entry.id || !entry.ts || !entry.status) {
+            issues.push({
+              severity: 'ERROR',
+              message: `${log}:${i+1} Missing required fields`
+            });
+          }
+        } catch (err) {
+          issues.push({
+            severity: 'ERROR',
+            message: `${log}:${i+1} Invalid JSON`
+          });
+        }
+      }
+    }
+    
+    return issues;
+  }
+  
+  private async scanSecrets(): Promise<Issue[]> {
+    const issues: Issue[] = [];
+    const patterns = [
+      { name: 'API Key', regex: /sk_live_[A-Za-z0-9]+/ },
+      { name: 'AWS Key', regex: /AKIA[A-Z0-9]{16}/ },
+      { name: 'Generic Key', regex: /API_KEY\s*=\s*['"][^'"]+['"]/ },
+      { name: 'Password', regex: /password\s*=\s*['"][^'"]+['"]/ },
+    ];
+    
+    const entries = await readLog('memory.log');
+    
+    for (const entry of entries) {
+      for (const pattern of patterns) {
+        if (pattern.regex.test(entry.details)) {
+          issues.push({
+            severity: 'CRITICAL',
+            message: `${pattern.name} detected in ${entry.id}`,
+            fix: `memorylink delete-memory ${entry.id} --secure`
+          });
+        }
+      }
+    }
+    
+    return issues;
+  }
+  
+  private async checkProtectedFiles(): Promise<Issue[]> {
+    const issues: Issue[] = [];
+    const protected = await readProtectedFiles();
+    
+    const criticalFiles = ['.env', '*.pem', 'config/production.*'];
+    
+    for (const pattern of criticalFiles) {
+      if (!protected.includes(pattern)) {
+        issues.push({
+          severity: 'WARNING',
+          message: `${pattern} is not protected`,
+          fix: `memorylink protect ${pattern}`
+        });
+      }
+    }
+    
+    return issues;
+  }
+}
+
+// Add to CLI
+program
+  .command('doctor')
+  .action(async () => {
+    const doctor = new Doctor();
+    const issues = await doctor.runChecks();
+    
+    if (issues.length === 0) {
+      console.log('✅ All checks passed!');
+      return;
+    }
+    
+    // Group by severity
+    const critical = issues.filter(i => i.severity === 'CRITICAL');
+    const errors = issues.filter(i => i.severity === 'ERROR');
+    const warnings = issues.filter(i => i.severity === 'WARNING');
+    
+    if (critical.length > 0) {
+      console.log('\n❌ CRITICAL ISSUES:');
+      for (const issue of critical) {
+        console.log(`  ${issue.message}`);
+        if (issue.fix) console.log(`  Fix: ${issue.fix}`);
+      }
+    }
+    
+    if (errors.length > 0) {
+      console.log('\n⚠️  ERRORS:');
+      for (const issue of errors) {
+        console.log(`  ${issue.message}`);
+      }
+    }
+    
+    if (warnings.length > 0) {
+      console.log('\n💡 WARNINGS:');
+      for (const issue of warnings) {
+        console.log(`  ${issue.message}`);
+        if (issue.fix) console.log(`  Fix: ${issue.fix}`);
+      }
+    }
+  });
+```
+
+**Test:**
+```bash
+# Add test data with secret
+memorylink memory "API key is sk_live_abc123" --tags test
+
+# Run doctor
+memorylink doctor
+# Should detect: CRITICAL - API key detected in mem_001
+
+# Fix it
+memorylink delete-memory mem_001 --secure
+
+# Run doctor again
+memorylink doctor
+# Should pass
+```
+
+---
+
+### Day 6: Documentation + Testing (4 hours)
+
+**Task: Final polish**
+
+**Update README.md:**
+```markdown
+# MemoryLink v1.0
+
+## Quick Start
+
+```bash
+# Install
+npm install -g memorylink
+
+# Initialize
+cd your-project
+memorylink init
+
+# Protect files
+memorylink protect .env
+memorylink protect config/**
+
+# Add memory
+memorylink memory "Use JWT for auth" --tags auth,api
+
+# Search
+memorylink search "auth"
+
+# Get context for Cursor
+memorylink prompt cursor --tag=auth
+
+# Check health
+memorylink doctor
+```
+
+## JSONL Format
+
+Memory entries:
+```json
+{
+  "id": "mem_001",
+  "ts": "2025-12-12T10:00:00Z",
+  "project": "my-project",
+  "agent": "cursor",
+  "type": "decision",
+  "details": "Use JWT for authentication",
+  "tags": ["auth", "api"],
+  "status": "ACTIVE"
+}
+```
+
+## Commands
+
+- `search <keyword>` - Search memories
+- `prompt <tool>` - Formatted context
+- `doctor` - Health check
+- All previous commands still work!
+
+## What Changed
+
+v1.0 adds:
+- ✅ JSONL format (robust)
+- ✅ File locking (safe)
+- ✅ Search + filters (usable)
+- ✅ Formatted output (easy)
+- ✅ Doctor checks (secure)
+```
+
+**Final testing:**
+```bash
+# Test all features
+npm test
+
+# Test on real project
+cd ../test-project
+memorylink init
+memorylink protect .env
+memorylink memory "Test project" --tags test
+memorylink search "test"
+memorylink prompt cursor
+memorylink doctor
+```
+
+---
+
+## ✅ ACCEPTANCE CRITERIA
+
+**You're done when:**
+
+1. ✅ All logs use JSONL format
+2. ✅ All writes use file locking
+3. ✅ Search works with filters
+4. ✅ Formatted output works for cursor/claude
+5. ✅ Doctor detects secrets and issues
+6. ✅ All tests pass
+7. ✅ Documentation is complete
+8. ✅ Package builds successfully
+
+---
+
+## 🚀 WHAT YOU DO NEXT (RIGHT NOW)
+
+**Step 1: Confirm Understanding**
+```
+Reply: "Understood! I will:
+1. Convert to JSONL format
+2. Add file locking
+3. Implement search + filters
+4. Add formatted output
+5. Build doctor command
+6. Test everything
+
+Starting with Day 1: JSONL conversion."
+```
+
+**Step 2: Start Day 1**
+```
+1. Open src/types.ts
+2. Update MemoryEntry interface
+3. Open src/memory.ts
+4. Update write() function
+5. Update read() function
+6. Test with example entry
+7. Report: "Day 1 complete, JSONL working"
+```
+
+---
+
+**Buddy (Cursor AI), are you ready to start building?** 🚀
+
+**Reply "START" and I'll guide you through Day 1!** 🎯
+