memorylink 1.0.0

package/dist/search/vector-search.js

@@ -0,0 +1,535 @@
+"use strict";
+/**
+ * MemoryLink - Vector Search
+ * Semantic search using embeddings for better recall
+ *
+ * v1.1: Vector search implementation
+ *
+ * Supports:
+ * - OpenAI embeddings (if API key provided)
+ * - Local embeddings (optional, via transformers.js)
+ * - In-memory vector storage (for small datasets)
+ * - Optional persistent storage (SQLite + FAISS)
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.initializeVectorStore = initializeVectorStore;
+exports.vectorSearch = vectorSearch;
+exports.isVectorStoreInitialized = isVectorStoreInitialized;
+exports.loadVectorStoreFromDisk = loadVectorStoreFromDisk;
+exports.getVectorStoreStats = getVectorStoreStats;
+exports.clearVectorStore = clearVectorStore;
+const fs = __importStar(require("fs"));
+const path = __importStar(require("path"));
+const utils_js_1 = require("../utils.js");
+const local_embeddings_js_1 = require("./local-embeddings.js");
+/**
+ * In-memory vector store with persistent storage support
+ */
+class VectorStore {
+    entries = [];
+    initialized = false;
+    indexDir;
+    provider = 'openai';
+    /**
+     * Set index directory for persistent storage
+     */
+    setIndexDir(dir) {
+        this.indexDir = dir;
+        // Ensure directory exists
+        if (!fs.existsSync(dir)) {
+            fs.mkdirSync(dir, { recursive: true });
+        }
+    }
+    /**
+     * Set embedding provider
+     */
+    setProvider(provider) {
+        this.provider = provider;
+    }
+    /**
+     * Get embedding provider
+     */
+    getProvider() {
+        return this.provider;
+    }
+    /**
+     * Add entry with embedding
+     */
+    add(entry, embedding, text) {
+        this.entries.push({
+            id: entry.id,
+            entry,
+            embedding,
+            text,
+        });
+        this.initialized = true;
+        // Persist to disk if index directory is set
+        if (this.indexDir) {
+            this.saveToDisk();
+        }
+    }
+    /**
+     * Save embeddings to disk (JSONL format)
+     */
+    saveToDisk() {
+        if (!this.indexDir)
+            return;
+        const embeddingsPath = path.join(this.indexDir, 'embeddings.jsonl');
+        const metadataPath = path.join(this.indexDir, 'metadata.json');
+        // Write embeddings (append mode for incremental updates)
+        const lines = this.entries.map(e => JSON.stringify({
+            id: e.id,
+            embedding: e.embedding,
+            text: e.text,
+            entry: e.entry,
+        }));
+        fs.writeFileSync(embeddingsPath, lines.join('\n') + '\n');
+        // Write metadata
+        const metadata = {
+            version: '1.0',
+            provider: this.provider,
+            count: this.entries.length,
+            lastUpdated: new Date().toISOString(),
+        };
+        fs.writeFileSync(metadataPath, JSON.stringify(metadata, null, 2));
+    }
+    /**
+     * Load embeddings from disk
+     */
+    loadFromDisk() {
+        if (!this.indexDir)
+            return false;
+        const embeddingsPath = path.join(this.indexDir, 'embeddings.jsonl');
+        const metadataPath = path.join(this.indexDir, 'metadata.json');
+        if (!fs.existsSync(embeddingsPath)) {
+            return false;
+        }
+        try {
+            // Read metadata
+            if (fs.existsSync(metadataPath)) {
+                const metadata = JSON.parse(fs.readFileSync(metadataPath, 'utf-8'));
+                this.provider = metadata.provider || 'openai';
+            }
+            // Read embeddings
+            const lines = fs.readFileSync(embeddingsPath, 'utf-8').split('\n').filter(l => l.trim());
+            this.entries = [];
+            for (const line of lines) {
+                try {
+                    const data = JSON.parse(line);
+                    this.entries.push({
+                        id: data.id,
+                        entry: data.entry,
+                        embedding: data.embedding,
+                        text: data.text,
+                    });
+                }
+                catch (e) {
+                    // Skip invalid lines
+                }
+            }
+            this.initialized = this.entries.length > 0;
+            return this.initialized;
+        }
+        catch (error) {
+            (0, utils_js_1.warn)(`Failed to load embeddings from disk: ${error instanceof Error ? error.message : 'Unknown error'}`);
+            return false;
+        }
+    }
+    /**
+     * Search for similar entries
+     */
+    search(queryEmbedding, limit = 10) {
+        if (!this.initialized || this.entries.length === 0) {
+            return [];
+        }
+        // Calculate cosine similarity for each entry
+        const scored = this.entries.map(item => ({
+            entry: item.entry,
+            text: item.text,
+            score: cosineSimilarity(queryEmbedding, item.embedding),
+        }));
+        // Sort by score (descending) and return top N
+        return scored
+            .sort((a, b) => b.score - a.score)
+            .slice(0, limit);
+    }
+    /**
+     * Get all entries count
+     */
+    size() {
+        return this.entries.length;
+    }
+    /**
+     * Clear all entries
+     */
+    clear() {
+        this.entries = [];
+        this.initialized = false;
+        // Clear disk storage
+        if (this.indexDir) {
+            const embeddingsPath = path.join(this.indexDir, 'embeddings.jsonl');
+            const metadataPath = path.join(this.indexDir, 'metadata.json');
+            if (fs.existsSync(embeddingsPath)) {
+                fs.unlinkSync(embeddingsPath);
+            }
+            if (fs.existsSync(metadataPath)) {
+                fs.unlinkSync(metadataPath);
+            }
+        }
+    }
+    /**
+     * Check if initialized
+     */
+    isInitialized() {
+        return this.initialized;
+    }
+}
+/**
+ * Calculate cosine similarity between two vectors
+ */
+function cosineSimilarity(vec1, vec2) {
+    if (vec1.length !== vec2.length) {
+        return 0;
+    }
+    let dotProduct = 0;
+    let norm1 = 0;
+    let norm2 = 0;
+    for (let i = 0; i < vec1.length; i++) {
+        dotProduct += vec1[i] * vec2[i];
+        norm1 += vec1[i] * vec1[i];
+        norm2 += vec2[i] * vec2[i];
+    }
+    if (norm1 === 0 || norm2 === 0) {
+        return 0;
+    }
+    return dotProduct / (Math.sqrt(norm1) * Math.sqrt(norm2));
+}
+/**
+ * Extract text from entry for embedding
+ */
+function extractTextForEmbedding(entry) {
+    let text = '';
+    // Memory entry
+    if ('details' in entry) {
+        const memEntry = entry;
+        text += memEntry.details || '';
+        if (memEntry.code) {
+            text += ' ' + memEntry.code;
+        }
+        if (memEntry.context) {
+            text += ' ' + memEntry.context;
+        }
+    }
+    // Learning entry
+    if ('problem' in entry) {
+        const learnEntry = entry;
+        text += (learnEntry.problem || '') + ' ' + (learnEntry.solution || '');
+    }
+    // Change entry
+    if ('file' in entry) {
+        const changeEntry = entry;
+        text += (changeEntry.file || '') + ' ' + (changeEntry.reason || '');
+    }
+    // Tags
+    if (entry.tags && entry.tags.length > 0) {
+        text += ' ' + entry.tags.join(' ');
+    }
+    return text.trim();
+}
+/**
+ * Generate embeddings using OpenAI API
+ */
+async function generateEmbeddingOpenAI(text) {
+    const apiKey = process.env.OPENAI_API_KEY;
+    if (!apiKey) {
+        throw new Error('OPENAI_API_KEY environment variable not set. Set it to use vector search.');
+    }
+    try {
+        // Dynamic import to avoid requiring openai if not used
+        const { OpenAI } = await import('openai');
+        const openai = new OpenAI({ apiKey });
+        const response = await openai.embeddings.create({
+            model: 'text-embedding-3-small',
+            input: text,
+        });
+        return response.data[0].embedding;
+    }
+    catch (error) {
+        throw new Error(`Failed to generate embedding: ${error instanceof Error ? error.message : 'Unknown error'}`);
+    }
+}
+/**
+ * Generate embeddings for multiple texts (batch)
+ */
+async function generateEmbeddingsOpenAI(texts) {
+    const apiKey = process.env.OPENAI_API_KEY;
+    if (!apiKey) {
+        throw new Error('OPENAI_API_KEY environment variable not set. Set it to use vector search.');
+    }
+    try {
+        const { OpenAI } = await import('openai');
+        const openai = new OpenAI({ apiKey });
+        const response = await openai.embeddings.create({
+            model: 'text-embedding-3-small',
+            input: texts,
+        });
+        return response.data.map(item => item.embedding);
+    }
+    catch (error) {
+        throw new Error(`Failed to generate embeddings: ${error instanceof Error ? error.message : 'Unknown error'}`);
+    }
+}
+/**
+ * Retry wrapper with exponential backoff for embedding calls
+ */
+async function withRetry(fn, label, maxRetries = 3) {
+    let attempt = 0;
+    let lastErr;
+    while (attempt < maxRetries) {
+        try {
+            return await fn();
+        }
+        catch (err) {
+            lastErr = err;
+            attempt += 1;
+            const delay = Math.min(1000 * 2 ** (attempt - 1), 5000);
+            (0, utils_js_1.warn)(`Vector search: ${label} failed (attempt ${attempt}/${maxRetries}): ${err instanceof Error ? err.message : String(err)}. Retrying in ${delay}ms...`);
+            await new Promise(res => setTimeout(res, delay));
+        }
+    }
+    throw new Error(`${label} failed after ${maxRetries} attempts: ${lastErr instanceof Error ? lastErr.message : String(lastErr)}`);
+}
+// Global vector store instance
+let vectorStore = null;
+/**
+ * Initialize vector store and index existing entries
+ */
+async function initializeVectorStore(root, provider) {
+    const projectRoot = root || (0, utils_js_1.findRoot)();
+    if (!projectRoot || !(0, utils_js_1.isInitialized)(projectRoot)) {
+        throw new Error('MemoryLink is not initialized. Run: memorylink init');
+    }
+    // Determine provider
+    let embeddingProvider = provider || 'openai';
+    if (!provider) {
+        // Auto-detect: prefer local if available, otherwise OpenAI
+        if ((0, local_embeddings_js_1.isLocalEmbeddingsAvailable)()) {
+            embeddingProvider = 'local';
+            (0, utils_js_1.info)('Using local embeddings (offline mode)');
+        }
+        else if (process.env.OPENAI_API_KEY) {
+            embeddingProvider = 'openai';
+            (0, utils_js_1.info)('Using OpenAI embeddings');
+        }
+        else {
+            throw new Error('No embedding provider available. Install @xenova/transformers for local embeddings or set OPENAI_API_KEY for OpenAI embeddings.');
+        }
+    }
+    // Validate provider
+    if (embeddingProvider === 'openai' && !process.env.OPENAI_API_KEY) {
+        throw new Error('OPENAI_API_KEY environment variable not set. Set it to use OpenAI embeddings, or install @xenova/transformers for local embeddings.');
+    }
+    if (embeddingProvider === 'local' && !(0, local_embeddings_js_1.isLocalEmbeddingsAvailable)()) {
+        throw new Error('@xenova/transformers not installed. Install with: npm install @xenova/transformers');
+    }
+    vectorStore = new VectorStore();
+    vectorStore.setProvider(embeddingProvider);
+    // Set up persistent storage
+    const indexDir = path.join(projectRoot, '.memorylink', 'index');
+    vectorStore.setIndexDir(indexDir);
+    // Try to load from disk first
+    if (vectorStore.loadFromDisk()) {
+        const stats = getVectorStoreStats();
+        (0, utils_js_1.info)(`Loaded ${stats.size} embeddings from disk`);
+        return; // Already indexed
+    }
+    const memoryPath = (0, utils_js_1.getFilePath)('MEMORY', projectRoot);
+    const learningsPath = (0, utils_js_1.getFilePath)('LEARNINGS', projectRoot);
+    const changesPath = (0, utils_js_1.getFilePath)('CHANGES', projectRoot);
+    // Read all entries
+    const allEntries = [];
+    if ((0, utils_js_1.isJsonlFormat)(memoryPath)) {
+        const memoryEntries = (0, utils_js_1.readJsonlEntries)(memoryPath)
+            .filter(e => e.status === 'ACTIVE');
+        allEntries.push(...memoryEntries);
+    }
+    if ((0, utils_js_1.isJsonlFormat)(learningsPath)) {
+        const learningEntries = (0, utils_js_1.readJsonlEntries)(learningsPath)
+            .filter(e => e.status === 'ACTIVE');
+        allEntries.push(...learningEntries);
+    }
+    if ((0, utils_js_1.isJsonlFormat)(changesPath)) {
+        const changeEntries = (0, utils_js_1.readJsonlEntries)(changesPath);
+        allEntries.push(...changeEntries);
+    }
+    if (allEntries.length === 0) {
+        return; // No entries to index
+    }
+    // Generate embeddings in batches
+    const batchSize = embeddingProvider === 'openai' ? 100 : 10; // Smaller batches for local
+    const texts = allEntries.map(extractTextForEmbedding);
+    for (let i = 0; i < texts.length; i += batchSize) {
+        const batch = texts.slice(i, i + batchSize);
+        const batchEntries = allEntries.slice(i, i + batchSize);
+        try {
+            let embeddings;
+            if (embeddingProvider === 'openai') {
+                embeddings = await withRetry(() => generateEmbeddingsOpenAI(batch), 'generateEmbeddings');
+            }
+            else {
+                // Local embeddings (no retry needed, but can add if needed)
+                embeddings = await (0, local_embeddings_js_1.generateEmbeddingsLocal)(batch);
+            }
+            // Add to vector store
+            for (let j = 0; j < batch.length; j++) {
+                vectorStore.add(batchEntries[j], embeddings[j], batch[j]);
+            }
+        }
+        catch (error) {
+            (0, utils_js_1.warn)(`Failed to index batch ${i / batchSize + 1}: ${error instanceof Error ? error.message : 'Unknown error'}`);
+            // Continue with next batch
+        }
+    }
+}
+/**
+ * Search using vector embeddings
+ */
+async function vectorSearch(query, options = {}) {
+    const { limit = 10, threshold = 0.5, root } = options;
+    // Check if vector store is initialized
+    if (!vectorStore || !vectorStore.isInitialized()) {
+        // Try to load from disk first
+        if (root) {
+            const loaded = await loadVectorStoreFromDisk(root);
+            if (!loaded) {
+                // If not on disk, initialize fresh
+                await initializeVectorStore(root);
+            }
+        }
+        else {
+            throw new Error('Vector store not initialized. Run: memorylink index --vector');
+        }
+    }
+    if (!vectorStore || vectorStore.size() === 0) {
+        return [];
+    }
+    // Generate query embedding based on provider
+    let queryEmbedding;
+    const provider = vectorStore.getProvider();
+    if (provider === 'openai') {
+        if (!process.env.OPENAI_API_KEY) {
+            throw new Error('OPENAI_API_KEY environment variable not set. Set it to use OpenAI embeddings.');
+        }
+        queryEmbedding = await withRetry(() => generateEmbeddingOpenAI(query), 'generateEmbedding');
+    }
+    else {
+        queryEmbedding = await (0, local_embeddings_js_1.generateEmbeddingLocal)(query);
+    }
+    // Search
+    const results = vectorStore.search(queryEmbedding, limit * 2); // Get more results to filter by threshold
+    // Filter by threshold
+    return results.filter(result => result.score >= threshold).slice(0, limit);
+}
+/**
+ * Check if vector store is initialized (including from disk)
+ */
+function isVectorStoreInitialized(root) {
+    if (vectorStore && vectorStore.isInitialized()) {
+        return true;
+    }
+    // Check if index exists on disk
+    if (root) {
+        const projectRoot = root || (0, utils_js_1.findRoot)();
+        if (projectRoot && (0, utils_js_1.isInitialized)(projectRoot)) {
+            const indexDir = path.join(projectRoot, '.memorylink', 'index');
+            const embeddingsPath = path.join(indexDir, 'embeddings.jsonl');
+            return fs.existsSync(embeddingsPath);
+        }
+    }
+    return false;
+}
+/**
+ * Load vector store from disk if available
+ */
+async function loadVectorStoreFromDisk(root) {
+    const projectRoot = root || (0, utils_js_1.findRoot)();
+    if (!projectRoot || !(0, utils_js_1.isInitialized)(projectRoot)) {
+        return false;
+    }
+    const indexDir = path.join(projectRoot, '.memorylink', 'index');
+    const embeddingsPath = path.join(indexDir, 'embeddings.jsonl');
+    const metadataPath = path.join(indexDir, 'metadata.json');
+    if (!fs.existsSync(embeddingsPath)) {
+        return false;
+    }
+    try {
+        // Read metadata to determine provider
+        let provider = 'openai';
+        if (fs.existsSync(metadataPath)) {
+            const metadata = JSON.parse(fs.readFileSync(metadataPath, 'utf-8'));
+            provider = metadata.provider || 'openai';
+        }
+        vectorStore = new VectorStore();
+        vectorStore.setProvider(provider);
+        vectorStore.setIndexDir(indexDir);
+        return vectorStore.loadFromDisk();
+    }
+    catch (error) {
+        (0, utils_js_1.warn)(`Failed to load vector store from disk: ${error instanceof Error ? error.message : 'Unknown error'}`);
+        return false;
+    }
+}
+/**
+ * Get vector store statistics
+ */
+function getVectorStoreStats() {
+    if (!vectorStore) {
+        return { size: 0, initialized: false };
+    }
+    return {
+        size: vectorStore.size(),
+        initialized: vectorStore.isInitialized(),
+    };
+}
+/**
+ * Clear vector store (for re-indexing)
+ */
+function clearVectorStore() {
+    if (vectorStore) {
+        vectorStore.clear();
+    }
+}
+//# sourceMappingURL=vector-search.js.map

package/dist/search/vector-search.js.map

@@ -0,0 +1 @@
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package/dist/server/mcp-server.d.ts

@@ -0,0 +1,18 @@
+/**
+ * MemoryLink - MCP Server
+ * Model Context Protocol server for Claude Desktop and Cursor integration
+ *
+ * Enables automatic context injection without manual copy-paste
+ *
+ * v1.1: MCP Server implementation
+ */
+import { Server } from '@modelcontextprotocol/sdk/server/index.js';
+/**
+ * Create and configure MCP server
+ */
+export declare function createMCPServer(): Promise<Server>;
+/**
+ * Start MCP server (stdio transport for Claude Desktop)
+ */
+export declare function startMCPServer(): Promise<void>;
+//# sourceMappingURL=mcp-server.d.ts.map

package/dist/server/mcp-server.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"mcp-server.d.ts","sourceRoot":"","sources":["../../src/server/mcp-server.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EAAE,MAAM,EAAE,MAAM,2CAA2C,CAAC;AA6OnE;;GAEG;AACH,wBAAsB,eAAe,IAAI,OAAO,CAAC,MAAM,CAAC,CAqFvD;AAED;;GAEG;AACH,wBAAsB,cAAc,IAAI,OAAO,CAAC,IAAI,CAAC,CAcpD"}