@ahmed-g-gad/apothem 0.1.1

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Files changed (674) hide show
  1. package/CHANGELOG.md +60 -0
  2. package/LICENSE +21 -0
  3. package/LICENSES/MIT.txt +18 -0
  4. package/LICENSES/PSF-2.0.txt +47 -0
  5. package/README.md +549 -0
  6. package/bin/README.md +37 -0
  7. package/bin/apothem.mjs +78 -0
  8. package/package.json +75 -0
  9. package/pyproject.toml +347 -0
  10. package/src/apothem/README.md +52 -0
  11. package/src/apothem/__init__.py +66 -0
  12. package/src/apothem/__main__.py +28 -0
  13. package/src/apothem/_vendor/.keep +0 -0
  14. package/src/apothem/_vendor/__init__.py +25 -0
  15. package/src/apothem/_vendor/attr/__init__.py +104 -0
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  20. package/src/apothem/_vendor/attr/_config.py +31 -0
  21. package/src/apothem/_vendor/attr/_funcs.py +497 -0
  22. package/src/apothem/_vendor/attr/_make.py +3406 -0
  23. package/src/apothem/_vendor/attr/_next_gen.py +674 -0
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  27. package/src/apothem/_vendor/attr/converters.py +162 -0
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  38. package/src/apothem/_vendor/attr.LICENSE +21 -0
  39. package/src/apothem/_vendor/attrs/__init__.py +72 -0
  40. package/src/apothem/_vendor/attrs/__init__.pyi +314 -0
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  46. package/src/apothem/_vendor/attrs/validators.py +3 -0
  47. package/src/apothem/_vendor/attrs.LICENSE +21 -0
  48. package/src/apothem/_vendor/jsonschema/__init__.py +120 -0
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  67. package/src/apothem/_vendor/jsonschema/benchmarks/useless_keywords.py +32 -0
  68. package/src/apothem/_vendor/jsonschema/benchmarks/validator_creation.py +14 -0
  69. package/src/apothem/_vendor/jsonschema/cli.py +292 -0
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  71. package/src/apothem/_vendor/jsonschema/protocols.py +230 -0
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  76. package/src/apothem/_vendor/jsonschema_specifications/schemas/draft201909/metaschema.json +42 -0
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  90. package/src/apothem/_vendor/jsonschema_specifications/schemas/draft202012/vocabularies/unevaluated +15 -0
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  92. package/src/apothem/_vendor/jsonschema_specifications/schemas/draft3/metaschema.json +172 -0
  93. package/src/apothem/_vendor/jsonschema_specifications/schemas/draft4/metaschema.json +149 -0
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  95. package/src/apothem/_vendor/jsonschema_specifications/schemas/draft7/metaschema.json +166 -0
  96. package/src/apothem/_vendor/jsonschema_specifications.LICENSE +19 -0
  97. package/src/apothem/_vendor/referencing/__init__.py +7 -0
  98. package/src/apothem/_vendor/referencing/_attrs.py +31 -0
  99. package/src/apothem/_vendor/referencing/_attrs.pyi +21 -0
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  103. package/src/apothem/_vendor/referencing/py.typed +0 -0
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  105. package/src/apothem/_vendor/referencing/typing.py +61 -0
  106. package/src/apothem/_vendor/referencing.LICENSE +19 -0
  107. package/src/apothem/_vendor/rpds/__init__.py +251 -0
  108. package/src/apothem/_vendor/typing_extensions.LICENSE +279 -0
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  116. package/src/apothem/_vendor/yaml/emitter.py +1137 -0
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  126. package/src/apothem/_vendor/yaml/serializer.py +110 -0
  127. package/src/apothem/_vendor/yaml/tokens.py +103 -0
  128. package/src/apothem/_vendor/yaml.LICENSE +20 -0
  129. package/src/apothem/agents/README.md +60 -0
  130. package/src/apothem/agents/codebase-explorer.md +91 -0
  131. package/src/apothem/agents/convention-auditor.md +93 -0
  132. package/src/apothem/agents/dependency-auditor.md +97 -0
  133. package/src/apothem/agents/fact-checker.md +84 -0
  134. package/src/apothem/agents/mcp-builder.md +86 -0
  135. package/src/apothem/agents/memory-auditor.md +93 -0
  136. package/src/apothem/agents/prompt-evaluator.md +87 -0
  137. package/src/apothem/agents/quality-gate.md +103 -0
  138. package/src/apothem/agents/refactor-surgeon.md +74 -0
  139. package/src/apothem/agents/research-scout.md +73 -0
  140. package/src/apothem/agents/security-scanner.md +83 -0
  141. package/src/apothem/agents/test-runner.md +84 -0
  142. package/src/apothem/audit/README.md +73 -0
  143. package/src/apothem/audit/_scan_lib.py +182 -0
  144. package/src/apothem/audit/analyze_graph.py +260 -0
  145. package/src/apothem/audit/build_capability_graph.py +607 -0
  146. package/src/apothem/audit/build_inventory.py +657 -0
  147. package/src/apothem/audit/build_plans_provenance.py +997 -0
  148. package/src/apothem/audit/check_links.py +389 -0
  149. package/src/apothem/audit/classify_artifacts.py +381 -0
  150. package/src/apothem/audit/deprecated-tokens.txt +10 -0
  151. package/src/apothem/audit/execute_plans_migration.py +491 -0
  152. package/src/apothem/audit/known-projects.txt +15 -0
  153. package/src/apothem/audit/render_capability_index.py +467 -0
  154. package/src/apothem/audit/render_inventory.py +405 -0
  155. package/src/apothem/audit/scan_ai_surfaces.py +1125 -0
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  194. package/src/apothem/cli/reference_export.py +126 -0
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  585. package/src/apothem/rules/planning-techniques.md +130 -0
  586. package/src/apothem/rules/pre-emission-gate-bars.md +86 -0
  587. package/src/apothem/rules/pre-emission-gate.md +54 -0
  588. package/src/apothem/rules/production-ready-prs-surfaces.md +162 -0
  589. package/src/apothem/rules/production-ready-prs.md +83 -0
  590. package/src/apothem/rules/propagation.md +63 -0
  591. package/src/apothem/rules/recommend-next-step.md +106 -0
  592. package/src/apothem/rules/refactoring-discipline.md +76 -0
  593. package/src/apothem/rules/session-closure.md +44 -0
  594. package/src/apothem/rules/sota-elevation-exemplars.md +76 -0
  595. package/src/apothem/rules/sota-elevation.md +52 -0
  596. package/src/apothem/rules/source-accessibility.md +58 -0
  597. package/src/apothem/rules/surgical-manipulation.md +48 -0
  598. package/src/apothem/rules/systemic-participation-relations.md +108 -0
  599. package/src/apothem/rules/systemic-participation.md +70 -0
  600. package/src/apothem/rules/ten-dimension-check-dimensions.md +52 -0
  601. package/src/apothem/rules/ten-dimension-check.md +59 -0
  602. package/src/apothem/rules/token-budget-discipline.md +81 -0
  603. package/src/apothem/rules/token-efficiency-rewrite-protocol.md +79 -0
  604. package/src/apothem/rules/token-efficiency-rewrite.md +77 -0
  605. package/src/apothem/rules/tool-use-discipline.md +48 -0
  606. package/src/apothem/rules/visual-leverage.md +102 -0
  607. package/src/apothem/schemas/NOTICE.md +9 -0
  608. package/src/apothem/schemas/README.md +104 -0
  609. package/src/apothem/schemas/__init__.py +176 -0
  610. package/src/apothem/schemas/advisory-finding.schema.json +111 -0
  611. package/src/apothem/schemas/agent.schema.json +106 -0
  612. package/src/apothem/schemas/authorship-header.txt +1 -0
  613. package/src/apothem/schemas/cohort-manifest.yaml +248 -0
  614. package/src/apothem/schemas/cohort-metadata-vocabulary.yaml +168 -0
  615. package/src/apothem/schemas/cohort.schema.json +113 -0
  616. package/src/apothem/schemas/command.schema.json +68 -0
  617. package/src/apothem/schemas/compatibility-matrix.yaml +432 -0
  618. package/src/apothem/schemas/context-fragment.schema.json +64 -0
  619. package/src/apothem/schemas/freshness-token-denylist.txt +51 -0
  620. package/src/apothem/schemas/handoff-manifest.yaml +353 -0
  621. package/src/apothem/schemas/header-exceptions.txt +141 -0
  622. package/src/apothem/schemas/header-visibility.yaml +39 -0
  623. package/src/apothem/schemas/learning-signal.schema.json +46 -0
  624. package/src/apothem/schemas/memory-record.schema.json +61 -0
  625. package/src/apothem/schemas/output-style.schema.json +40 -0
  626. package/src/apothem/schemas/plan.schema.json +51 -0
  627. package/src/apothem/schemas/plugin.schema.json +83 -0
  628. package/src/apothem/schemas/profile.example.yaml +70 -0
  629. package/src/apothem/schemas/profile.minimal.yaml +6 -0
  630. package/src/apothem/schemas/profile.schema.json +396 -0
  631. package/src/apothem/schemas/reference-token-denylist.txt +25 -0
  632. package/src/apothem/schemas/skill.schema.json +75 -0
  633. package/src/apothem/skills/README.md +93 -0
  634. package/src/apothem/skills/dependency-upgrade/SKILL.md +105 -0
  635. package/src/apothem/skills/dev-toolkit/SKILL.md +120 -0
  636. package/src/apothem/skills/diagram-authoring/SKILL.md +113 -0
  637. package/src/apothem/skills/document-authoring/SKILL.md +118 -0
  638. package/src/apothem/skills/ecosystem-audit/SKILL.md +108 -0
  639. package/src/apothem/skills/ecosystem-audit/references/audit-fortress.md +85 -0
  640. package/src/apothem/skills/ecosystem-audit/references/procedure.md +162 -0
  641. package/src/apothem/skills/eval-harness/SKILL.md +88 -0
  642. package/src/apothem/skills/incident-runbook/SKILL.md +92 -0
  643. package/src/apothem/skills/multi-source-research/SKILL.md +90 -0
  644. package/src/apothem/skills/plan-suite/SKILL.md +118 -0
  645. package/src/apothem/skills/plan-suite/master_template.md +1324 -0
  646. package/src/apothem/skills/projectify/SKILL.md +117 -0
  647. package/src/apothem/skills/prompt-engineering/SKILL.md +122 -0
  648. package/src/apothem/skills/refactor-extract/SKILL.md +85 -0
  649. package/src/apothem/skills/research-suite/SKILL.md +170 -0
  650. package/src/apothem/skills/research-suite/references/directory-structure.md +47 -0
  651. package/src/apothem/skills/research-suite/references/lifecycle.md +67 -0
  652. package/src/apothem/skills/research-suite/references/principal-investigator-framework.md +37 -0
  653. package/src/apothem/skills/research-suite/references/rigor-mandates.md +30 -0
  654. package/src/apothem/skills/research-suite/research_template.md +476 -0
  655. package/src/apothem/skills/secret-rotation/SKILL.md +87 -0
  656. package/src/apothem/skills/source-synthesis/SKILL.md +92 -0
  657. package/src/apothem/skills/surgical-guard/SKILL.md +118 -0
  658. package/src/apothem/skills/test-authoring/SKILL.md +85 -0
  659. package/src/apothem/skills/vuln-triage/SKILL.md +91 -0
  660. package/src/apothem/skills/workflow/SKILL.md +139 -0
  661. package/src/apothem/statuslines/README.md +26 -0
  662. package/src/apothem/statuslines/__init__.py +20 -0
  663. package/src/apothem/statuslines/conformity.json +5 -0
  664. package/src/apothem/statuslines/render.py +334 -0
  665. package/src/apothem/statuslines/statusline.md +50 -0
  666. package/src/apothem/templates/README.md +43 -0
  667. package/src/apothem/templates/agents-md-template.md +80 -0
  668. package/src/apothem/templates/consideration-log.md +39 -0
  669. package/src/apothem/templates/expertise-gap-log.md +56 -0
  670. package/src/apothem/templates/master-index-template.md +93 -0
  671. package/src/apothem/templates/potency-map.md +53 -0
  672. package/src/apothem/templates/preservation-audit.md +60 -0
  673. package/src/apothem/templates/question-resolution-audit.md +52 -0
  674. package/src/apothem/templates/trace-matrix-template.md +77 -0
@@ -0,0 +1,444 @@
1
+ # SPDX-License-Identifier: MIT
2
+
3
+ """Emit structured JSON context for supported harness hook events.
4
+
5
+ Two modes of operation:
6
+
7
+ * **Hook mode** — when both ``--hook-event-name`` and ``--context-file``
8
+ are supplied, read a context-message file plus hook metadata from
9
+ stdin and emit a single-line ``hookSpecificOutput`` envelope.
10
+ * **Diagnostic mode** — when either argument is absent, print a human-
11
+ readable ecosystem summary (counts of rules/commands/agents/skills
12
+ and presence of core files).
13
+
14
+ On any unexpected failure, emit a valid JSON envelope with a failure
15
+ message and exit 0 — never surface raw tracebacks to the hook runtime.
16
+ """
17
+
18
+ from __future__ import annotations
19
+
20
+ import argparse
21
+ import json
22
+ import re
23
+ import sys
24
+ from datetime import datetime, timezone
25
+ from pathlib import Path
26
+ from typing import Final
27
+
28
+ _LIB_DIR: Final[Path] = Path(__file__).resolve().parent / "lib"
29
+ if str(_LIB_DIR) not in sys.path:
30
+ sys.path.insert(0, str(_LIB_DIR))
31
+
32
+ from events import (
33
+ HOOK_SPECIFIC_OUTPUT_EVENTS as _HOOK_SPECIFIC_OUTPUT_EVENTS,
34
+ )
35
+ from log import get_logger
36
+ from resolve_root import Mode, resolve_project_root
37
+
38
+ _logger = get_logger(__name__)
39
+
40
+ _UNICODE_MAP: Final[dict[str, str]] = {
41
+ "\u2013": "-",
42
+ "\u2014": "-",
43
+ "\u2018": "'",
44
+ "\u2019": "'",
45
+ "\u201c": '"',
46
+ "\u201d": '"',
47
+ "\u00d7": "x",
48
+ "\u2212": "-",
49
+ "\u2192": "->",
50
+ "\u2264": "<=",
51
+ }
52
+
53
+ _NON_ASCII = re.compile(r"[^\x00-\x7f]")
54
+
55
+
56
+ def normalize_ascii(text: str) -> str:
57
+ """Map common typographic Unicode to ASCII, strip remaining non-ASCII."""
58
+ if not text:
59
+ return ""
60
+ for source, target in _UNICODE_MAP.items():
61
+ text = text.replace(source, target)
62
+ return _NON_ASCII.sub("", text)
63
+
64
+
65
+ def read_hook_stdin() -> dict[str, object] | None:
66
+ """Read and parse the hook's stdin JSON payload, if any."""
67
+ if sys.stdin.isatty():
68
+ return None
69
+ try:
70
+ raw = sys.stdin.read()
71
+ except OSError:
72
+ return None
73
+ if not raw or not raw.strip():
74
+ return None
75
+ try:
76
+ parsed = json.loads(raw)
77
+ except json.JSONDecodeError:
78
+ return None
79
+ return parsed if isinstance(parsed, dict) else None
80
+
81
+
82
+ def build_metadata_prefix(payload: dict[str, object] | None) -> str:
83
+ """Return a bracketed metadata prefix, or empty string when absent."""
84
+ if not payload:
85
+ return ""
86
+ parts: list[str] = []
87
+ for field, label in (
88
+ ("source", "source"),
89
+ ("tool_name", "tool"),
90
+ ("matcher", "matcher"),
91
+ ):
92
+ value = payload.get(field)
93
+ if isinstance(value, str) and value:
94
+ parts.append(f"{label}={value}")
95
+ return f"[{' | '.join(parts)}]" if parts else ""
96
+
97
+
98
+ _BASH_GIT_TRIGGERS: Final[tuple[str, ...]] = (
99
+ "git commit",
100
+ "git checkout -b",
101
+ "git branch",
102
+ "git tag",
103
+ "git merge -m",
104
+ "git rebase --exec",
105
+ "git stash push -m",
106
+ "git notes add",
107
+ "git mv",
108
+ "git rm",
109
+ )
110
+
111
+ _PASS_SUPPRESSED_PRETOOLUSE_MESSAGES: Final[frozenset[str]] = frozenset(
112
+ {
113
+ "pretooluse-write.md",
114
+ "pretooluse-edit.md",
115
+ "pretooluse-notebookedit.md",
116
+ "pretooluse-conformity.md",
117
+ }
118
+ )
119
+
120
+ _HEADER_GUARD_MESSAGES: Final[frozenset[str]] = frozenset(
121
+ {
122
+ "pretooluse-write-header-guard.md",
123
+ "pretooluse-edit-header-guard.md",
124
+ }
125
+ )
126
+
127
+ _PLAN_GUARD_MESSAGES: Final[frozenset[str]] = frozenset(
128
+ {
129
+ "pretooluse-write-plan-guard.md",
130
+ "pretooluse-bash-plan-guard.md",
131
+ }
132
+ )
133
+
134
+ _PLAN_SHAPED_MARKERS: Final[tuple[str, ...]] = (
135
+ "master-plan:",
136
+ "phase-id:",
137
+ "phases:",
138
+ "resumption contract",
139
+ "phase output registry",
140
+ )
141
+
142
+ _PLAN_PATH_MARKERS: Final[tuple[str, ...]] = (
143
+ ".plans/",
144
+ ".plans\\",
145
+ "/plans/",
146
+ "\\plans\\",
147
+ )
148
+
149
+
150
+ def should_suppress_bash_hook(
151
+ event_name: str,
152
+ context_file: str,
153
+ payload: dict[str, object] | None,
154
+ ) -> bool:
155
+ """Return True when a Bash PreToolUse hook should emit no context.
156
+
157
+ The pretooluse-bash context message is a git-artifact-isolation
158
+ reminder keyed to the fixed git-mutation trigger set above. For
159
+ non-git Bash invocations the message adds noise, so the hook emits
160
+ an empty envelope instead. Mirrors the trigger declaration in
161
+ ``hooks/messages/pretooluse-bash.md`` to preserve the message-
162
+ dispatcher paired-shape invariant.
163
+ """
164
+ if event_name != "PreToolUse":
165
+ return False
166
+ if not context_file.endswith("pretooluse-bash.md"):
167
+ return False
168
+ if not payload or payload.get("tool_name") != "Bash":
169
+ return False
170
+ tool_input = payload.get("tool_input")
171
+ if not isinstance(tool_input, dict):
172
+ return False
173
+ command = tool_input.get("command")
174
+ if not isinstance(command, str):
175
+ return False
176
+ return not any(trigger in command for trigger in _BASH_GIT_TRIGGERS)
177
+
178
+
179
+ def _context_basename(context_file: str) -> str:
180
+ return Path(context_file).name
181
+
182
+
183
+ def _tool_input(payload: dict[str, object] | None) -> dict[str, object]:
184
+ if not payload:
185
+ return {}
186
+ raw = payload.get("tool_input")
187
+ return raw if isinstance(raw, dict) else {}
188
+
189
+
190
+ def _path_from_tool_input(tool_input: dict[str, object]) -> str:
191
+ for key in ("file_path", "path", "notebook_path"):
192
+ value = tool_input.get(key)
193
+ if isinstance(value, str):
194
+ return value
195
+ return ""
196
+
197
+
198
+ def _text_from_tool_input(tool_input: dict[str, object]) -> str:
199
+ chunks: list[str] = []
200
+ for key in ("content", "new_string", "command", "cell_source"):
201
+ value = tool_input.get(key)
202
+ if isinstance(value, str):
203
+ chunks.append(value)
204
+ return "\n".join(chunks)
205
+
206
+
207
+ def _nearest_git_root(start: Path) -> Path:
208
+ current = start.resolve()
209
+ if current.is_file():
210
+ current = current.parent
211
+ for candidate in (current, *current.parents):
212
+ if (candidate / ".git").exists():
213
+ return candidate
214
+ return current
215
+
216
+
217
+ def _is_project_local_plan_path(path: str) -> bool:
218
+ if not path:
219
+ return False
220
+ try:
221
+ candidate = Path(path).expanduser()
222
+ if not candidate.is_absolute():
223
+ candidate = Path.cwd() / candidate
224
+ resolved = candidate.resolve()
225
+ root = _nearest_git_root(Path.cwd())
226
+ resolved.relative_to(root)
227
+ except (OSError, RuntimeError, ValueError):
228
+ return False
229
+ return ".plans" in resolved.parts
230
+
231
+
232
+ def _looks_plan_shaped(path: str, text: str) -> bool:
233
+ if _is_project_local_plan_path(path):
234
+ return False
235
+ haystack = f"{path}\n{text}".lower().replace("\\", "/")
236
+ if any(marker.replace("\\", "/") in haystack for marker in _PLAN_PATH_MARKERS):
237
+ return True
238
+ return any(marker in haystack for marker in _PLAN_SHAPED_MARKERS)
239
+
240
+
241
+ def _missing_header(path: str, text: str) -> bool:
242
+ if not path or not text:
243
+ return False
244
+ try:
245
+ from apothem.conformity import file_header_grep
246
+
247
+ result = file_header_grep.check(text, Path(path))
248
+ except Exception as exc: # code-craft-boundary: broad-except; fail-closed guard.
249
+ # Fail closed (treat as header-absent) but surface the failing class so
250
+ # a genuine internal defect in file_header_grep.check is distinguishable
251
+ # from a true header-absent verdict rather than silently masked.
252
+ _logger.warning(
253
+ "file_header_grep.check raised %s for %s; failing closed",
254
+ type(exc).__name__,
255
+ path,
256
+ )
257
+ return True
258
+ return not result.passed
259
+
260
+
261
+ def should_suppress_pretooluse_context(
262
+ event_name: str,
263
+ context_file: str,
264
+ payload: dict[str, object] | None,
265
+ ) -> bool:
266
+ """Suppress allow-class PreToolUse context messages.
267
+
268
+ The actual conformity hooks still run. This emitter only controls
269
+ advisory context volume, so pass-class tool calls should return an
270
+ empty envelope and reserve prose for findings or guarded actions.
271
+ """
272
+ if event_name != "PreToolUse":
273
+ return False
274
+ basename = _context_basename(context_file)
275
+ if basename in _PASS_SUPPRESSED_PRETOOLUSE_MESSAGES:
276
+ return True
277
+ tool_input = _tool_input(payload)
278
+ path = _path_from_tool_input(tool_input)
279
+ text = _text_from_tool_input(tool_input)
280
+ if basename in _PLAN_GUARD_MESSAGES:
281
+ return not _looks_plan_shaped(path, text)
282
+ if basename in _HEADER_GUARD_MESSAGES:
283
+ return not _missing_header(path, text)
284
+ return False
285
+
286
+
287
+ def compose_context(message: str, payload: dict[str, object] | None) -> str:
288
+ """Combine a metadata prefix (if any) with the message body."""
289
+ prefix = build_metadata_prefix(payload)
290
+ body = message or ""
291
+ if prefix and body:
292
+ return f"{prefix}\n{body}"
293
+ return prefix or body
294
+
295
+
296
+ def resolve_context_path(context_file: str, root: Path) -> Path | None:
297
+ """Return `context_file` as an absolute path within `root`.
298
+
299
+ Absolute paths are accepted as-is (the caller — typically a hook
300
+ configuration in ``settings.json`` — explicitly chose them). Relative
301
+ paths are joined against `root` and verified not to escape it via
302
+ parent-directory traversal; on escape, returns ``None`` so the caller
303
+ can decline the read instead of leaking arbitrary file contents.
304
+ """
305
+ candidate = Path(context_file)
306
+ if candidate.is_absolute():
307
+ return candidate
308
+ resolved = (root / candidate).resolve()
309
+ try:
310
+ resolved.relative_to(root.resolve())
311
+ except ValueError:
312
+ return None
313
+ return resolved
314
+
315
+
316
+ def build_envelope(event_name: str, additional_context: str) -> dict[str, object]:
317
+ """Return the schema-valid envelope for `event_name`."""
318
+ if event_name in _HOOK_SPECIFIC_OUTPUT_EVENTS:
319
+ return {
320
+ "hookSpecificOutput": {
321
+ "hookEventName": event_name,
322
+ "additionalContext": additional_context,
323
+ }
324
+ }
325
+ return {"systemMessage": additional_context}
326
+
327
+
328
+ def emit_hook_envelope(event_name: str, additional_context: str, quiet: bool) -> None:
329
+ """Print the schema-appropriate JSON envelope (unless quiet)."""
330
+ envelope = build_envelope(event_name, additional_context)
331
+ if not quiet:
332
+ sys.stdout.write(json.dumps(envelope, separators=(",", ":")) + "\n")
333
+
334
+
335
+ def emit_failure_envelope(event_name: str, message: str) -> None:
336
+ """Print a failure envelope to stdout; used as the last-resort path."""
337
+ envelope = build_envelope(
338
+ event_name or "UnknownEvent",
339
+ f"Hook execution failure: {message}",
340
+ )
341
+ sys.stdout.write(json.dumps(envelope, separators=(",", ":")) + "\n")
342
+
343
+
344
+ def run_hook_mode(
345
+ event_name: str,
346
+ context_file: str,
347
+ quiet: bool,
348
+ root: Path,
349
+ ) -> None:
350
+ """Read context file + stdin, emit the hook envelope."""
351
+ resolved = resolve_context_path(context_file, root)
352
+ message = ""
353
+ if resolved is None:
354
+ _logger.warning("Refusing context path outside root: %s", context_file)
355
+ elif resolved.is_file():
356
+ try:
357
+ message = resolved.read_text(encoding="utf-8")
358
+ except OSError as exc:
359
+ _logger.debug("Context file unreadable: %s", exc)
360
+
361
+ payload = read_hook_stdin()
362
+ if should_suppress_bash_hook(event_name, context_file, payload):
363
+ emit_hook_envelope(event_name, "", quiet)
364
+ return
365
+ if should_suppress_pretooluse_context(event_name, context_file, payload):
366
+ emit_hook_envelope(event_name, "", quiet)
367
+ return
368
+ combined = compose_context(message, payload)
369
+ additional = normalize_ascii(combined)
370
+ emit_hook_envelope(event_name, additional, quiet)
371
+
372
+
373
+ def run_diagnostic_mode(root: Path) -> None:
374
+ """Print a human-readable ecosystem summary.
375
+
376
+ Uses ``print`` deliberately: this is the diagnostic CLI surface, not
377
+ operational logging. ``logging`` would route through handlers that the
378
+ CLI runner doesn't necessarily configure.
379
+ """
380
+ now = datetime.now(timezone.utc).strftime("%Y-%m-%dT%H:%M:%SZ")
381
+ print("=== Apothem Ecosystem Diagnostics ===")
382
+ print(f"Timestamp: {now}")
383
+ print(f"PROJECT_ROOT: {root}")
384
+ print()
385
+
386
+ counts: dict[str, int] = {
387
+ "Rules": _count(root / "rules", "*.md"),
388
+ "Commands": _count(root / "commands", "*.md"),
389
+ "Agents": _count(root / "agents", "*.md", recursive=False),
390
+ "Skills": _count(root / "skills", "SKILL.md", recursive=True),
391
+ }
392
+ print(" ".join(f"{k}: {v}" for k, v in counts.items()))
393
+ print()
394
+
395
+ probes = (
396
+ "CLAUDE.md",
397
+ "settings.json",
398
+ "site/content/docs/reference/settings-reference.mdx",
399
+ "hooks/emit_hook_context.py",
400
+ "hooks/session_start_bootstrap.py",
401
+ )
402
+ for rel in probes:
403
+ marker = "+" if (root / rel).exists() else "-"
404
+ print(f"{marker} {rel}")
405
+
406
+
407
+ def _count(directory: Path, pattern: str, *, recursive: bool = False) -> int:
408
+ """Return the number of files matching `pattern` in `directory`."""
409
+ if not directory.is_dir():
410
+ return 0
411
+ matcher = directory.rglob if recursive else directory.glob
412
+ return sum(1 for _ in matcher(pattern))
413
+
414
+
415
+ def parse_args(argv: list[str] | None = None) -> argparse.Namespace:
416
+ """Parse CLI arguments."""
417
+ parser = argparse.ArgumentParser(
418
+ prog="emit_hook_context",
419
+ description="Emit hook context as structured JSON.",
420
+ )
421
+ parser.add_argument("--hook-event-name", "-n", default="")
422
+ parser.add_argument("--context-file", "-c", default="")
423
+ parser.add_argument("--quiet", "-q", action="store_true")
424
+ return parser.parse_args(argv)
425
+
426
+
427
+ def main(argv: list[str] | None = None) -> None:
428
+ """Entry point. Guarantees a valid JSON envelope on any failure."""
429
+ args = parse_args(argv)
430
+ try:
431
+ root = resolve_project_root(Mode.HOOKS, script_path=Path(__file__))
432
+ if root is None:
433
+ root = Path(__file__).resolve().parent.parent
434
+
435
+ if not args.hook_event_name or not args.context_file:
436
+ run_diagnostic_mode(root)
437
+ return
438
+ run_hook_mode(args.hook_event_name, args.context_file, args.quiet, root)
439
+ except Exception as exc:
440
+ emit_failure_envelope(args.hook_event_name, str(exc))
441
+
442
+
443
+ if __name__ == "__main__":
444
+ main()