ruby-eigen 0.0.9 → 0.0.10.pre1

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Files changed (293) hide show
  1. checksums.yaml +4 -4
  2. data/LICENSE +22 -0
  3. data/README.md +21 -0
  4. data/ext/eigen/eigen3/COPYING.BSD +26 -0
  5. data/ext/eigen/eigen3/COPYING.MPL2 +373 -0
  6. data/ext/eigen/eigen3/COPYING.README +18 -0
  7. data/ext/eigen/eigen3/Eigen/Array +11 -0
  8. data/ext/eigen/eigen3/Eigen/Cholesky +32 -0
  9. data/ext/eigen/eigen3/Eigen/CholmodSupport +45 -0
  10. data/ext/eigen/eigen3/Eigen/Core +376 -0
  11. data/ext/eigen/eigen3/Eigen/Dense +7 -0
  12. data/ext/eigen/eigen3/Eigen/Eigen +2 -0
  13. data/ext/eigen/eigen3/Eigen/Eigen2Support +95 -0
  14. data/ext/eigen/eigen3/Eigen/Eigenvalues +48 -0
  15. data/ext/eigen/eigen3/Eigen/Geometry +63 -0
  16. data/ext/eigen/eigen3/Eigen/Householder +23 -0
  17. data/ext/eigen/eigen3/Eigen/IterativeLinearSolvers +40 -0
  18. data/ext/eigen/eigen3/Eigen/Jacobi +26 -0
  19. data/ext/eigen/eigen3/Eigen/LU +41 -0
  20. data/ext/eigen/eigen3/Eigen/LeastSquares +32 -0
  21. data/ext/eigen/eigen3/Eigen/MetisSupport +28 -0
  22. data/ext/eigen/eigen3/Eigen/PaStiXSupport +46 -0
  23. data/ext/eigen/eigen3/Eigen/PardisoSupport +30 -0
  24. data/ext/eigen/eigen3/Eigen/QR +45 -0
  25. data/ext/eigen/eigen3/Eigen/QtAlignedMalloc +34 -0
  26. data/ext/eigen/eigen3/Eigen/SPQRSupport +29 -0
  27. data/ext/eigen/eigen3/Eigen/SVD +37 -0
  28. data/ext/eigen/eigen3/Eigen/Sparse +27 -0
  29. data/ext/eigen/eigen3/Eigen/SparseCore +64 -0
  30. data/ext/eigen/eigen3/Eigen/SparseLU +49 -0
  31. data/ext/eigen/eigen3/Eigen/SparseQR +33 -0
  32. data/ext/eigen/eigen3/Eigen/StdDeque +27 -0
  33. data/ext/eigen/eigen3/Eigen/StdList +26 -0
  34. data/ext/eigen/eigen3/Eigen/StdVector +27 -0
  35. data/ext/eigen/eigen3/Eigen/SuperLUSupport +59 -0
  36. data/ext/eigen/eigen3/Eigen/UmfPackSupport +36 -0
  37. data/ext/eigen/eigen3/Eigen/src/Cholesky/LDLT.h +611 -0
  38. data/ext/eigen/eigen3/Eigen/src/Cholesky/LLT.h +498 -0
  39. data/ext/eigen/eigen3/Eigen/src/Cholesky/LLT_MKL.h +102 -0
  40. data/ext/eigen/eigen3/Eigen/src/CholmodSupport/CholmodSupport.h +607 -0
  41. data/ext/eigen/eigen3/Eigen/src/Core/Array.h +323 -0
  42. data/ext/eigen/eigen3/Eigen/src/Core/ArrayBase.h +226 -0
  43. data/ext/eigen/eigen3/Eigen/src/Core/ArrayWrapper.h +264 -0
  44. data/ext/eigen/eigen3/Eigen/src/Core/Assign.h +590 -0
  45. data/ext/eigen/eigen3/Eigen/src/Core/Assign_MKL.h +224 -0
  46. data/ext/eigen/eigen3/Eigen/src/Core/BandMatrix.h +334 -0
  47. data/ext/eigen/eigen3/Eigen/src/Core/Block.h +406 -0
  48. data/ext/eigen/eigen3/Eigen/src/Core/BooleanRedux.h +154 -0
  49. data/ext/eigen/eigen3/Eigen/src/Core/CommaInitializer.h +154 -0
  50. data/ext/eigen/eigen3/Eigen/src/Core/CoreIterators.h +61 -0
  51. data/ext/eigen/eigen3/Eigen/src/Core/CwiseBinaryOp.h +230 -0
  52. data/ext/eigen/eigen3/Eigen/src/Core/CwiseNullaryOp.h +864 -0
  53. data/ext/eigen/eigen3/Eigen/src/Core/CwiseUnaryOp.h +126 -0
  54. data/ext/eigen/eigen3/Eigen/src/Core/CwiseUnaryView.h +139 -0
  55. data/ext/eigen/eigen3/Eigen/src/Core/DenseBase.h +521 -0
  56. data/ext/eigen/eigen3/Eigen/src/Core/DenseCoeffsBase.h +754 -0
  57. data/ext/eigen/eigen3/Eigen/src/Core/DenseStorage.h +434 -0
  58. data/ext/eigen/eigen3/Eigen/src/Core/Diagonal.h +237 -0
  59. data/ext/eigen/eigen3/Eigen/src/Core/DiagonalMatrix.h +313 -0
  60. data/ext/eigen/eigen3/Eigen/src/Core/DiagonalProduct.h +131 -0
  61. data/ext/eigen/eigen3/Eigen/src/Core/Dot.h +263 -0
  62. data/ext/eigen/eigen3/Eigen/src/Core/EigenBase.h +131 -0
  63. data/ext/eigen/eigen3/Eigen/src/Core/Flagged.h +140 -0
  64. data/ext/eigen/eigen3/Eigen/src/Core/ForceAlignedAccess.h +146 -0
  65. data/ext/eigen/eigen3/Eigen/src/Core/Functors.h +1026 -0
  66. data/ext/eigen/eigen3/Eigen/src/Core/Fuzzy.h +150 -0
  67. data/ext/eigen/eigen3/Eigen/src/Core/GeneralProduct.h +635 -0
  68. data/ext/eigen/eigen3/Eigen/src/Core/GenericPacketMath.h +350 -0
  69. data/ext/eigen/eigen3/Eigen/src/Core/GlobalFunctions.h +92 -0
  70. data/ext/eigen/eigen3/Eigen/src/Core/IO.h +250 -0
  71. data/ext/eigen/eigen3/Eigen/src/Core/Map.h +192 -0
  72. data/ext/eigen/eigen3/Eigen/src/Core/MapBase.h +247 -0
  73. data/ext/eigen/eigen3/Eigen/src/Core/MathFunctions.h +768 -0
  74. data/ext/eigen/eigen3/Eigen/src/Core/Matrix.h +420 -0
  75. data/ext/eigen/eigen3/Eigen/src/Core/MatrixBase.h +563 -0
  76. data/ext/eigen/eigen3/Eigen/src/Core/NestByValue.h +111 -0
  77. data/ext/eigen/eigen3/Eigen/src/Core/NoAlias.h +134 -0
  78. data/ext/eigen/eigen3/Eigen/src/Core/NumTraits.h +150 -0
  79. data/ext/eigen/eigen3/Eigen/src/Core/PermutationMatrix.h +721 -0
  80. data/ext/eigen/eigen3/Eigen/src/Core/PlainObjectBase.h +822 -0
  81. data/ext/eigen/eigen3/Eigen/src/Core/ProductBase.h +290 -0
  82. data/ext/eigen/eigen3/Eigen/src/Core/Random.h +152 -0
  83. data/ext/eigen/eigen3/Eigen/src/Core/Redux.h +409 -0
  84. data/ext/eigen/eigen3/Eigen/src/Core/Ref.h +278 -0
  85. data/ext/eigen/eigen3/Eigen/src/Core/Replicate.h +177 -0
  86. data/ext/eigen/eigen3/Eigen/src/Core/ReturnByValue.h +99 -0
  87. data/ext/eigen/eigen3/Eigen/src/Core/Reverse.h +224 -0
  88. data/ext/eigen/eigen3/Eigen/src/Core/Select.h +162 -0
  89. data/ext/eigen/eigen3/Eigen/src/Core/SelfAdjointView.h +314 -0
  90. data/ext/eigen/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h +191 -0
  91. data/ext/eigen/eigen3/Eigen/src/Core/SolveTriangular.h +260 -0
  92. data/ext/eigen/eigen3/Eigen/src/Core/StableNorm.h +203 -0
  93. data/ext/eigen/eigen3/Eigen/src/Core/Stride.h +108 -0
  94. data/ext/eigen/eigen3/Eigen/src/Core/Swap.h +126 -0
  95. data/ext/eigen/eigen3/Eigen/src/Core/Transpose.h +419 -0
  96. data/ext/eigen/eigen3/Eigen/src/Core/Transpositions.h +436 -0
  97. data/ext/eigen/eigen3/Eigen/src/Core/TriangularMatrix.h +839 -0
  98. data/ext/eigen/eigen3/Eigen/src/Core/VectorBlock.h +95 -0
  99. data/ext/eigen/eigen3/Eigen/src/Core/VectorwiseOp.h +642 -0
  100. data/ext/eigen/eigen3/Eigen/src/Core/Visitor.h +237 -0
  101. data/ext/eigen/eigen3/Eigen/src/Core/arch/AltiVec/Complex.h +217 -0
  102. data/ext/eigen/eigen3/Eigen/src/Core/arch/AltiVec/PacketMath.h +501 -0
  103. data/ext/eigen/eigen3/Eigen/src/Core/arch/Default/Settings.h +49 -0
  104. data/ext/eigen/eigen3/Eigen/src/Core/arch/NEON/Complex.h +253 -0
  105. data/ext/eigen/eigen3/Eigen/src/Core/arch/NEON/PacketMath.h +420 -0
  106. data/ext/eigen/eigen3/Eigen/src/Core/arch/SSE/Complex.h +442 -0
  107. data/ext/eigen/eigen3/Eigen/src/Core/arch/SSE/MathFunctions.h +475 -0
  108. data/ext/eigen/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h +649 -0
  109. data/ext/eigen/eigen3/Eigen/src/Core/products/CoeffBasedProduct.h +476 -0
  110. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1341 -0
  111. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h +427 -0
  112. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +278 -0
  113. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_MKL.h +146 -0
  114. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix_MKL.h +118 -0
  115. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixVector.h +566 -0
  116. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixVector_MKL.h +131 -0
  117. data/ext/eigen/eigen3/Eigen/src/Core/products/Parallelizer.h +162 -0
  118. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +436 -0
  119. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixMatrix_MKL.h +295 -0
  120. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixVector.h +281 -0
  121. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixVector_MKL.h +114 -0
  122. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointProduct.h +123 -0
  123. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
  124. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixMatrix.h +427 -0
  125. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixMatrix_MKL.h +309 -0
  126. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h +348 -0
  127. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixVector_MKL.h +247 -0
  128. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularSolverMatrix.h +332 -0
  129. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularSolverMatrix_MKL.h +155 -0
  130. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularSolverVector.h +139 -0
  131. data/ext/eigen/eigen3/Eigen/src/Core/util/BlasUtil.h +264 -0
  132. data/ext/eigen/eigen3/Eigen/src/Core/util/Constants.h +451 -0
  133. data/ext/eigen/eigen3/Eigen/src/Core/util/DisableStupidWarnings.h +40 -0
  134. data/ext/eigen/eigen3/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
  135. data/ext/eigen/eigen3/Eigen/src/Core/util/MKL_support.h +158 -0
  136. data/ext/eigen/eigen3/Eigen/src/Core/util/Macros.h +451 -0
  137. data/ext/eigen/eigen3/Eigen/src/Core/util/Memory.h +977 -0
  138. data/ext/eigen/eigen3/Eigen/src/Core/util/Meta.h +243 -0
  139. data/ext/eigen/eigen3/Eigen/src/Core/util/NonMPL2.h +3 -0
  140. data/ext/eigen/eigen3/Eigen/src/Core/util/ReenableStupidWarnings.h +14 -0
  141. data/ext/eigen/eigen3/Eigen/src/Core/util/StaticAssert.h +208 -0
  142. data/ext/eigen/eigen3/Eigen/src/Core/util/XprHelper.h +469 -0
  143. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Block.h +126 -0
  144. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Cwise.h +192 -0
  145. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/CwiseOperators.h +298 -0
  146. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/AlignedBox.h +159 -0
  147. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/All.h +115 -0
  148. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/AngleAxis.h +214 -0
  149. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Hyperplane.h +254 -0
  150. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/ParametrizedLine.h +141 -0
  151. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Quaternion.h +495 -0
  152. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Rotation2D.h +145 -0
  153. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/RotationBase.h +123 -0
  154. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Scaling.h +167 -0
  155. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Transform.h +786 -0
  156. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Translation.h +184 -0
  157. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/LU.h +120 -0
  158. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Lazy.h +71 -0
  159. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/LeastSquares.h +169 -0
  160. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Macros.h +20 -0
  161. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/MathFunctions.h +57 -0
  162. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Memory.h +45 -0
  163. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Meta.h +75 -0
  164. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Minor.h +117 -0
  165. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/QR.h +67 -0
  166. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/SVD.h +637 -0
  167. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/TriangularSolver.h +42 -0
  168. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/VectorBlock.h +94 -0
  169. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/ComplexEigenSolver.h +341 -0
  170. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/ComplexSchur.h +456 -0
  171. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/ComplexSchur_MKL.h +94 -0
  172. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/EigenSolver.h +607 -0
  173. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +350 -0
  174. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +227 -0
  175. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/HessenbergDecomposition.h +373 -0
  176. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +160 -0
  177. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/RealQZ.h +624 -0
  178. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/RealSchur.h +525 -0
  179. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/RealSchur_MKL.h +83 -0
  180. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +801 -0
  181. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_MKL.h +92 -0
  182. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/Tridiagonalization.h +557 -0
  183. data/ext/eigen/eigen3/Eigen/src/Geometry/AlignedBox.h +392 -0
  184. data/ext/eigen/eigen3/Eigen/src/Geometry/AngleAxis.h +233 -0
  185. data/ext/eigen/eigen3/Eigen/src/Geometry/EulerAngles.h +104 -0
  186. data/ext/eigen/eigen3/Eigen/src/Geometry/Homogeneous.h +307 -0
  187. data/ext/eigen/eigen3/Eigen/src/Geometry/Hyperplane.h +280 -0
  188. data/ext/eigen/eigen3/Eigen/src/Geometry/OrthoMethods.h +218 -0
  189. data/ext/eigen/eigen3/Eigen/src/Geometry/ParametrizedLine.h +195 -0
  190. data/ext/eigen/eigen3/Eigen/src/Geometry/Quaternion.h +776 -0
  191. data/ext/eigen/eigen3/Eigen/src/Geometry/Rotation2D.h +160 -0
  192. data/ext/eigen/eigen3/Eigen/src/Geometry/RotationBase.h +206 -0
  193. data/ext/eigen/eigen3/Eigen/src/Geometry/Scaling.h +166 -0
  194. data/ext/eigen/eigen3/Eigen/src/Geometry/Transform.h +1455 -0
  195. data/ext/eigen/eigen3/Eigen/src/Geometry/Translation.h +206 -0
  196. data/ext/eigen/eigen3/Eigen/src/Geometry/Umeyama.h +177 -0
  197. data/ext/eigen/eigen3/Eigen/src/Geometry/arch/Geometry_SSE.h +115 -0
  198. data/ext/eigen/eigen3/Eigen/src/Householder/BlockHouseholder.h +68 -0
  199. data/ext/eigen/eigen3/Eigen/src/Householder/Householder.h +171 -0
  200. data/ext/eigen/eigen3/Eigen/src/Householder/HouseholderSequence.h +441 -0
  201. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +149 -0
  202. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +263 -0
  203. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +256 -0
  204. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +282 -0
  205. data/ext/eigen/eigen3/Eigen/src/Jacobi/Jacobi.h +433 -0
  206. data/ext/eigen/eigen3/Eigen/src/LU/Determinant.h +101 -0
  207. data/ext/eigen/eigen3/Eigen/src/LU/FullPivLU.h +751 -0
  208. data/ext/eigen/eigen3/Eigen/src/LU/Inverse.h +400 -0
  209. data/ext/eigen/eigen3/Eigen/src/LU/PartialPivLU.h +509 -0
  210. data/ext/eigen/eigen3/Eigen/src/LU/PartialPivLU_MKL.h +85 -0
  211. data/ext/eigen/eigen3/Eigen/src/LU/arch/Inverse_SSE.h +329 -0
  212. data/ext/eigen/eigen3/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  213. data/ext/eigen/eigen3/Eigen/src/OrderingMethods/Amd.h +444 -0
  214. data/ext/eigen/eigen3/Eigen/src/OrderingMethods/Eigen_Colamd.h +1850 -0
  215. data/ext/eigen/eigen3/Eigen/src/PaStiXSupport/PaStiXSupport.h +721 -0
  216. data/ext/eigen/eigen3/Eigen/src/PardisoSupport/PardisoSupport.h +592 -0
  217. data/ext/eigen/eigen3/Eigen/src/QR/ColPivHouseholderQR.h +580 -0
  218. data/ext/eigen/eigen3/Eigen/src/QR/ColPivHouseholderQR_MKL.h +99 -0
  219. data/ext/eigen/eigen3/Eigen/src/QR/FullPivHouseholderQR.h +622 -0
  220. data/ext/eigen/eigen3/Eigen/src/QR/HouseholderQR.h +388 -0
  221. data/ext/eigen/eigen3/Eigen/src/QR/HouseholderQR_MKL.h +71 -0
  222. data/ext/eigen/eigen3/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +338 -0
  223. data/ext/eigen/eigen3/Eigen/src/SVD/JacobiSVD.h +976 -0
  224. data/ext/eigen/eigen3/Eigen/src/SVD/JacobiSVD_MKL.h +92 -0
  225. data/ext/eigen/eigen3/Eigen/src/SVD/UpperBidiagonalization.h +148 -0
  226. data/ext/eigen/eigen3/Eigen/src/SparseCholesky/SimplicialCholesky.h +671 -0
  227. data/ext/eigen/eigen3/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
  228. data/ext/eigen/eigen3/Eigen/src/SparseCore/AmbiVector.h +373 -0
  229. data/ext/eigen/eigen3/Eigen/src/SparseCore/CompressedStorage.h +233 -0
  230. data/ext/eigen/eigen3/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +245 -0
  231. data/ext/eigen/eigen3/Eigen/src/SparseCore/MappedSparseMatrix.h +181 -0
  232. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseBlock.h +537 -0
  233. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  234. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +325 -0
  235. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +163 -0
  236. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseDenseProduct.h +311 -0
  237. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseDiagonalProduct.h +196 -0
  238. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseDot.h +101 -0
  239. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseFuzzy.h +26 -0
  240. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseMatrix.h +1262 -0
  241. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseMatrixBase.h +461 -0
  242. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparsePermutation.h +148 -0
  243. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseProduct.h +188 -0
  244. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseRedux.h +45 -0
  245. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseSelfAdjointView.h +507 -0
  246. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +150 -0
  247. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseTranspose.h +63 -0
  248. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseTriangularView.h +179 -0
  249. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseUtil.h +172 -0
  250. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseVector.h +448 -0
  251. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseView.h +99 -0
  252. data/ext/eigen/eigen3/Eigen/src/SparseCore/TriangularSolver.h +334 -0
  253. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU.h +806 -0
  254. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  255. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_Memory.h +227 -0
  256. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_Structs.h +111 -0
  257. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +298 -0
  258. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  259. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_column_bmod.h +180 -0
  260. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_column_dfs.h +177 -0
  261. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +106 -0
  262. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +279 -0
  263. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +127 -0
  264. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  265. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  266. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  267. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  268. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_pruneL.h +135 -0
  269. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  270. data/ext/eigen/eigen3/Eigen/src/SparseQR/SparseQR.h +714 -0
  271. data/ext/eigen/eigen3/Eigen/src/StlSupport/StdDeque.h +134 -0
  272. data/ext/eigen/eigen3/Eigen/src/StlSupport/StdList.h +114 -0
  273. data/ext/eigen/eigen3/Eigen/src/StlSupport/StdVector.h +126 -0
  274. data/ext/eigen/eigen3/Eigen/src/StlSupport/details.h +84 -0
  275. data/ext/eigen/eigen3/Eigen/src/SuperLUSupport/SuperLUSupport.h +1026 -0
  276. data/ext/eigen/eigen3/Eigen/src/UmfPackSupport/UmfPackSupport.h +474 -0
  277. data/ext/eigen/eigen3/Eigen/src/misc/Image.h +84 -0
  278. data/ext/eigen/eigen3/Eigen/src/misc/Kernel.h +81 -0
  279. data/ext/eigen/eigen3/Eigen/src/misc/Solve.h +76 -0
  280. data/ext/eigen/eigen3/Eigen/src/misc/SparseSolve.h +128 -0
  281. data/ext/eigen/eigen3/Eigen/src/misc/blas.h +658 -0
  282. data/ext/eigen/eigen3/Eigen/src/plugins/ArrayCwiseBinaryOps.h +253 -0
  283. data/ext/eigen/eigen3/Eigen/src/plugins/ArrayCwiseUnaryOps.h +187 -0
  284. data/ext/eigen/eigen3/Eigen/src/plugins/BlockMethods.h +935 -0
  285. data/ext/eigen/eigen3/Eigen/src/plugins/CommonCwiseBinaryOps.h +46 -0
  286. data/ext/eigen/eigen3/Eigen/src/plugins/CommonCwiseUnaryOps.h +172 -0
  287. data/ext/eigen/eigen3/Eigen/src/plugins/MatrixCwiseBinaryOps.h +143 -0
  288. data/ext/eigen/eigen3/Eigen/src/plugins/MatrixCwiseUnaryOps.h +52 -0
  289. data/ext/eigen/eigen3/signature_of_eigen3_matrix_library +1 -0
  290. data/ext/eigen/eigen_wrap.cxx +19420 -10396
  291. data/ext/eigen/extconf.rb +37 -2
  292. data/lib/eigen.rb +146 -3
  293. metadata +294 -7
@@ -0,0 +1,59 @@
1
+ #ifndef EIGEN_SUPERLUSUPPORT_MODULE_H
2
+ #define EIGEN_SUPERLUSUPPORT_MODULE_H
3
+
4
+ #include "SparseCore"
5
+
6
+ #include "src/Core/util/DisableStupidWarnings.h"
7
+
8
+ #ifdef EMPTY
9
+ #define EIGEN_EMPTY_WAS_ALREADY_DEFINED
10
+ #endif
11
+
12
+ typedef int int_t;
13
+ #include <slu_Cnames.h>
14
+ #include <supermatrix.h>
15
+ #include <slu_util.h>
16
+
17
+ // slu_util.h defines a preprocessor token named EMPTY which is really polluting,
18
+ // so we remove it in favor of a SUPERLU_EMPTY token.
19
+ // If EMPTY was already defined then we don't undef it.
20
+
21
+ #if defined(EIGEN_EMPTY_WAS_ALREADY_DEFINED)
22
+ # undef EIGEN_EMPTY_WAS_ALREADY_DEFINED
23
+ #elif defined(EMPTY)
24
+ # undef EMPTY
25
+ #endif
26
+
27
+ #define SUPERLU_EMPTY (-1)
28
+
29
+ namespace Eigen { struct SluMatrix; }
30
+
31
+ /** \ingroup Support_modules
32
+ * \defgroup SuperLUSupport_Module SuperLUSupport module
33
+ *
34
+ * This module provides an interface to the <a href="http://crd-legacy.lbl.gov/~xiaoye/SuperLU/">SuperLU</a> library.
35
+ * It provides the following factorization class:
36
+ * - class SuperLU: a supernodal sequential LU factorization.
37
+ * - class SuperILU: a supernodal sequential incomplete LU factorization (to be used as a preconditioner for iterative methods).
38
+ *
39
+ * \warning When including this module, you have to use SUPERLU_EMPTY instead of EMPTY which is no longer defined because it is too polluting.
40
+ *
41
+ * \code
42
+ * #include <Eigen/SuperLUSupport>
43
+ * \endcode
44
+ *
45
+ * In order to use this module, the superlu headers must be accessible from the include paths, and your binary must be linked to the superlu library and its dependencies.
46
+ * The dependencies depend on how superlu has been compiled.
47
+ * For a cmake based project, you can use our FindSuperLU.cmake module to help you in this task.
48
+ *
49
+ */
50
+
51
+ #include "src/misc/Solve.h"
52
+ #include "src/misc/SparseSolve.h"
53
+
54
+ #include "src/SuperLUSupport/SuperLUSupport.h"
55
+
56
+
57
+ #include "src/Core/util/ReenableStupidWarnings.h"
58
+
59
+ #endif // EIGEN_SUPERLUSUPPORT_MODULE_H
@@ -0,0 +1,36 @@
1
+ #ifndef EIGEN_UMFPACKSUPPORT_MODULE_H
2
+ #define EIGEN_UMFPACKSUPPORT_MODULE_H
3
+
4
+ #include "SparseCore"
5
+
6
+ #include "src/Core/util/DisableStupidWarnings.h"
7
+
8
+ extern "C" {
9
+ #include <umfpack.h>
10
+ }
11
+
12
+ /** \ingroup Support_modules
13
+ * \defgroup UmfPackSupport_Module UmfPackSupport module
14
+ *
15
+ * This module provides an interface to the UmfPack library which is part of the <a href="http://www.cise.ufl.edu/research/sparse/SuiteSparse/">suitesparse</a> package.
16
+ * It provides the following factorization class:
17
+ * - class UmfPackLU: a multifrontal sequential LU factorization.
18
+ *
19
+ * \code
20
+ * #include <Eigen/UmfPackSupport>
21
+ * \endcode
22
+ *
23
+ * In order to use this module, the umfpack headers must be accessible from the include paths, and your binary must be linked to the umfpack library and its dependencies.
24
+ * The dependencies depend on how umfpack has been compiled.
25
+ * For a cmake based project, you can use our FindUmfPack.cmake module to help you in this task.
26
+ *
27
+ */
28
+
29
+ #include "src/misc/Solve.h"
30
+ #include "src/misc/SparseSolve.h"
31
+
32
+ #include "src/UmfPackSupport/UmfPackSupport.h"
33
+
34
+ #include "src/Core/util/ReenableStupidWarnings.h"
35
+
36
+ #endif // EIGEN_UMFPACKSUPPORT_MODULE_H
@@ -0,0 +1,611 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008-2011 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ // Copyright (C) 2009 Keir Mierle <mierle@gmail.com>
6
+ // Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
7
+ // Copyright (C) 2011 Timothy E. Holy <tim.holy@gmail.com >
8
+ //
9
+ // This Source Code Form is subject to the terms of the Mozilla
10
+ // Public License v. 2.0. If a copy of the MPL was not distributed
11
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
12
+
13
+ #ifndef EIGEN_LDLT_H
14
+ #define EIGEN_LDLT_H
15
+
16
+ namespace Eigen {
17
+
18
+ namespace internal {
19
+ template<typename MatrixType, int UpLo> struct LDLT_Traits;
20
+
21
+ // PositiveSemiDef means positive semi-definite and non-zero; same for NegativeSemiDef
22
+ enum SignMatrix { PositiveSemiDef, NegativeSemiDef, ZeroSign, Indefinite };
23
+ }
24
+
25
+ /** \ingroup Cholesky_Module
26
+ *
27
+ * \class LDLT
28
+ *
29
+ * \brief Robust Cholesky decomposition of a matrix with pivoting
30
+ *
31
+ * \param MatrixType the type of the matrix of which to compute the LDL^T Cholesky decomposition
32
+ * \param UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
33
+ * The other triangular part won't be read.
34
+ *
35
+ * Perform a robust Cholesky decomposition of a positive semidefinite or negative semidefinite
36
+ * matrix \f$ A \f$ such that \f$ A = P^TLDL^*P \f$, where P is a permutation matrix, L
37
+ * is lower triangular with a unit diagonal and D is a diagonal matrix.
38
+ *
39
+ * The decomposition uses pivoting to ensure stability, so that L will have
40
+ * zeros in the bottom right rank(A) - n submatrix. Avoiding the square root
41
+ * on D also stabilizes the computation.
42
+ *
43
+ * Remember that Cholesky decompositions are not rank-revealing. Also, do not use a Cholesky
44
+ * decomposition to determine whether a system of equations has a solution.
45
+ *
46
+ * \sa MatrixBase::ldlt(), class LLT
47
+ */
48
+ template<typename _MatrixType, int _UpLo> class LDLT
49
+ {
50
+ public:
51
+ typedef _MatrixType MatrixType;
52
+ enum {
53
+ RowsAtCompileTime = MatrixType::RowsAtCompileTime,
54
+ ColsAtCompileTime = MatrixType::ColsAtCompileTime,
55
+ Options = MatrixType::Options & ~RowMajorBit, // these are the options for the TmpMatrixType, we need a ColMajor matrix here!
56
+ MaxRowsAtCompileTime = MatrixType::MaxRowsAtCompileTime,
57
+ MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime,
58
+ UpLo = _UpLo
59
+ };
60
+ typedef typename MatrixType::Scalar Scalar;
61
+ typedef typename NumTraits<typename MatrixType::Scalar>::Real RealScalar;
62
+ typedef typename MatrixType::Index Index;
63
+ typedef Matrix<Scalar, RowsAtCompileTime, 1, Options, MaxRowsAtCompileTime, 1> TmpMatrixType;
64
+
65
+ typedef Transpositions<RowsAtCompileTime, MaxRowsAtCompileTime> TranspositionType;
66
+ typedef PermutationMatrix<RowsAtCompileTime, MaxRowsAtCompileTime> PermutationType;
67
+
68
+ typedef internal::LDLT_Traits<MatrixType,UpLo> Traits;
69
+
70
+ /** \brief Default Constructor.
71
+ *
72
+ * The default constructor is useful in cases in which the user intends to
73
+ * perform decompositions via LDLT::compute(const MatrixType&).
74
+ */
75
+ LDLT()
76
+ : m_matrix(),
77
+ m_transpositions(),
78
+ m_sign(internal::ZeroSign),
79
+ m_isInitialized(false)
80
+ {}
81
+
82
+ /** \brief Default Constructor with memory preallocation
83
+ *
84
+ * Like the default constructor but with preallocation of the internal data
85
+ * according to the specified problem \a size.
86
+ * \sa LDLT()
87
+ */
88
+ LDLT(Index size)
89
+ : m_matrix(size, size),
90
+ m_transpositions(size),
91
+ m_temporary(size),
92
+ m_sign(internal::ZeroSign),
93
+ m_isInitialized(false)
94
+ {}
95
+
96
+ /** \brief Constructor with decomposition
97
+ *
98
+ * This calculates the decomposition for the input \a matrix.
99
+ * \sa LDLT(Index size)
100
+ */
101
+ LDLT(const MatrixType& matrix)
102
+ : m_matrix(matrix.rows(), matrix.cols()),
103
+ m_transpositions(matrix.rows()),
104
+ m_temporary(matrix.rows()),
105
+ m_sign(internal::ZeroSign),
106
+ m_isInitialized(false)
107
+ {
108
+ compute(matrix);
109
+ }
110
+
111
+ /** Clear any existing decomposition
112
+ * \sa rankUpdate(w,sigma)
113
+ */
114
+ void setZero()
115
+ {
116
+ m_isInitialized = false;
117
+ }
118
+
119
+ /** \returns a view of the upper triangular matrix U */
120
+ inline typename Traits::MatrixU matrixU() const
121
+ {
122
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
123
+ return Traits::getU(m_matrix);
124
+ }
125
+
126
+ /** \returns a view of the lower triangular matrix L */
127
+ inline typename Traits::MatrixL matrixL() const
128
+ {
129
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
130
+ return Traits::getL(m_matrix);
131
+ }
132
+
133
+ /** \returns the permutation matrix P as a transposition sequence.
134
+ */
135
+ inline const TranspositionType& transpositionsP() const
136
+ {
137
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
138
+ return m_transpositions;
139
+ }
140
+
141
+ /** \returns the coefficients of the diagonal matrix D */
142
+ inline Diagonal<const MatrixType> vectorD() const
143
+ {
144
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
145
+ return m_matrix.diagonal();
146
+ }
147
+
148
+ /** \returns true if the matrix is positive (semidefinite) */
149
+ inline bool isPositive() const
150
+ {
151
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
152
+ return m_sign == internal::PositiveSemiDef || m_sign == internal::ZeroSign;
153
+ }
154
+
155
+ #ifdef EIGEN2_SUPPORT
156
+ inline bool isPositiveDefinite() const
157
+ {
158
+ return isPositive();
159
+ }
160
+ #endif
161
+
162
+ /** \returns true if the matrix is negative (semidefinite) */
163
+ inline bool isNegative(void) const
164
+ {
165
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
166
+ return m_sign == internal::NegativeSemiDef || m_sign == internal::ZeroSign;
167
+ }
168
+
169
+ /** \returns a solution x of \f$ A x = b \f$ using the current decomposition of A.
170
+ *
171
+ * This function also supports in-place solves using the syntax <tt>x = decompositionObject.solve(x)</tt> .
172
+ *
173
+ * \note_about_checking_solutions
174
+ *
175
+ * More precisely, this method solves \f$ A x = b \f$ using the decomposition \f$ A = P^T L D L^* P \f$
176
+ * by solving the systems \f$ P^T y_1 = b \f$, \f$ L y_2 = y_1 \f$, \f$ D y_3 = y_2 \f$,
177
+ * \f$ L^* y_4 = y_3 \f$ and \f$ P x = y_4 \f$ in succession. If the matrix \f$ A \f$ is singular, then
178
+ * \f$ D \f$ will also be singular (all the other matrices are invertible). In that case, the
179
+ * least-square solution of \f$ D y_3 = y_2 \f$ is computed. This does not mean that this function
180
+ * computes the least-square solution of \f$ A x = b \f$ is \f$ A \f$ is singular.
181
+ *
182
+ * \sa MatrixBase::ldlt()
183
+ */
184
+ template<typename Rhs>
185
+ inline const internal::solve_retval<LDLT, Rhs>
186
+ solve(const MatrixBase<Rhs>& b) const
187
+ {
188
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
189
+ eigen_assert(m_matrix.rows()==b.rows()
190
+ && "LDLT::solve(): invalid number of rows of the right hand side matrix b");
191
+ return internal::solve_retval<LDLT, Rhs>(*this, b.derived());
192
+ }
193
+
194
+ #ifdef EIGEN2_SUPPORT
195
+ template<typename OtherDerived, typename ResultType>
196
+ bool solve(const MatrixBase<OtherDerived>& b, ResultType *result) const
197
+ {
198
+ *result = this->solve(b);
199
+ return true;
200
+ }
201
+ #endif
202
+
203
+ template<typename Derived>
204
+ bool solveInPlace(MatrixBase<Derived> &bAndX) const;
205
+
206
+ LDLT& compute(const MatrixType& matrix);
207
+
208
+ template <typename Derived>
209
+ LDLT& rankUpdate(const MatrixBase<Derived>& w, const RealScalar& alpha=1);
210
+
211
+ /** \returns the internal LDLT decomposition matrix
212
+ *
213
+ * TODO: document the storage layout
214
+ */
215
+ inline const MatrixType& matrixLDLT() const
216
+ {
217
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
218
+ return m_matrix;
219
+ }
220
+
221
+ MatrixType reconstructedMatrix() const;
222
+
223
+ inline Index rows() const { return m_matrix.rows(); }
224
+ inline Index cols() const { return m_matrix.cols(); }
225
+
226
+ /** \brief Reports whether previous computation was successful.
227
+ *
228
+ * \returns \c Success if computation was succesful,
229
+ * \c NumericalIssue if the matrix.appears to be negative.
230
+ */
231
+ ComputationInfo info() const
232
+ {
233
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
234
+ return Success;
235
+ }
236
+
237
+ protected:
238
+
239
+ static void check_template_parameters()
240
+ {
241
+ EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
242
+ }
243
+
244
+ /** \internal
245
+ * Used to compute and store the Cholesky decomposition A = L D L^* = U^* D U.
246
+ * The strict upper part is used during the decomposition, the strict lower
247
+ * part correspond to the coefficients of L (its diagonal is equal to 1 and
248
+ * is not stored), and the diagonal entries correspond to D.
249
+ */
250
+ MatrixType m_matrix;
251
+ TranspositionType m_transpositions;
252
+ TmpMatrixType m_temporary;
253
+ internal::SignMatrix m_sign;
254
+ bool m_isInitialized;
255
+ };
256
+
257
+ namespace internal {
258
+
259
+ template<int UpLo> struct ldlt_inplace;
260
+
261
+ template<> struct ldlt_inplace<Lower>
262
+ {
263
+ template<typename MatrixType, typename TranspositionType, typename Workspace>
264
+ static bool unblocked(MatrixType& mat, TranspositionType& transpositions, Workspace& temp, SignMatrix& sign)
265
+ {
266
+ using std::abs;
267
+ typedef typename MatrixType::Scalar Scalar;
268
+ typedef typename MatrixType::RealScalar RealScalar;
269
+ typedef typename MatrixType::Index Index;
270
+ eigen_assert(mat.rows()==mat.cols());
271
+ const Index size = mat.rows();
272
+
273
+ if (size <= 1)
274
+ {
275
+ transpositions.setIdentity();
276
+ if (numext::real(mat.coeff(0,0)) > 0) sign = PositiveSemiDef;
277
+ else if (numext::real(mat.coeff(0,0)) < 0) sign = NegativeSemiDef;
278
+ else sign = ZeroSign;
279
+ return true;
280
+ }
281
+
282
+ for (Index k = 0; k < size; ++k)
283
+ {
284
+ // Find largest diagonal element
285
+ Index index_of_biggest_in_corner;
286
+ mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner);
287
+ index_of_biggest_in_corner += k;
288
+
289
+ transpositions.coeffRef(k) = index_of_biggest_in_corner;
290
+ if(k != index_of_biggest_in_corner)
291
+ {
292
+ // apply the transposition while taking care to consider only
293
+ // the lower triangular part
294
+ Index s = size-index_of_biggest_in_corner-1; // trailing size after the biggest element
295
+ mat.row(k).head(k).swap(mat.row(index_of_biggest_in_corner).head(k));
296
+ mat.col(k).tail(s).swap(mat.col(index_of_biggest_in_corner).tail(s));
297
+ std::swap(mat.coeffRef(k,k),mat.coeffRef(index_of_biggest_in_corner,index_of_biggest_in_corner));
298
+ for(int i=k+1;i<index_of_biggest_in_corner;++i)
299
+ {
300
+ Scalar tmp = mat.coeffRef(i,k);
301
+ mat.coeffRef(i,k) = numext::conj(mat.coeffRef(index_of_biggest_in_corner,i));
302
+ mat.coeffRef(index_of_biggest_in_corner,i) = numext::conj(tmp);
303
+ }
304
+ if(NumTraits<Scalar>::IsComplex)
305
+ mat.coeffRef(index_of_biggest_in_corner,k) = numext::conj(mat.coeff(index_of_biggest_in_corner,k));
306
+ }
307
+
308
+ // partition the matrix:
309
+ // A00 | - | -
310
+ // lu = A10 | A11 | -
311
+ // A20 | A21 | A22
312
+ Index rs = size - k - 1;
313
+ Block<MatrixType,Dynamic,1> A21(mat,k+1,k,rs,1);
314
+ Block<MatrixType,1,Dynamic> A10(mat,k,0,1,k);
315
+ Block<MatrixType,Dynamic,Dynamic> A20(mat,k+1,0,rs,k);
316
+
317
+ if(k>0)
318
+ {
319
+ temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint();
320
+ mat.coeffRef(k,k) -= (A10 * temp.head(k)).value();
321
+ if(rs>0)
322
+ A21.noalias() -= A20 * temp.head(k);
323
+ }
324
+
325
+ // In some previous versions of Eigen (e.g., 3.2.1), the scaling was omitted if the pivot
326
+ // was smaller than the cutoff value. However, soince LDLT is not rank-revealing
327
+ // we should only make sure we do not introduce INF or NaN values.
328
+ // LAPACK also uses 0 as the cutoff value.
329
+ RealScalar realAkk = numext::real(mat.coeffRef(k,k));
330
+ if((rs>0) && (abs(realAkk) > RealScalar(0)))
331
+ A21 /= realAkk;
332
+
333
+ if (sign == PositiveSemiDef) {
334
+ if (realAkk < 0) sign = Indefinite;
335
+ } else if (sign == NegativeSemiDef) {
336
+ if (realAkk > 0) sign = Indefinite;
337
+ } else if (sign == ZeroSign) {
338
+ if (realAkk > 0) sign = PositiveSemiDef;
339
+ else if (realAkk < 0) sign = NegativeSemiDef;
340
+ }
341
+ }
342
+
343
+ return true;
344
+ }
345
+
346
+ // Reference for the algorithm: Davis and Hager, "Multiple Rank
347
+ // Modifications of a Sparse Cholesky Factorization" (Algorithm 1)
348
+ // Trivial rearrangements of their computations (Timothy E. Holy)
349
+ // allow their algorithm to work for rank-1 updates even if the
350
+ // original matrix is not of full rank.
351
+ // Here only rank-1 updates are implemented, to reduce the
352
+ // requirement for intermediate storage and improve accuracy
353
+ template<typename MatrixType, typename WDerived>
354
+ static bool updateInPlace(MatrixType& mat, MatrixBase<WDerived>& w, const typename MatrixType::RealScalar& sigma=1)
355
+ {
356
+ using numext::isfinite;
357
+ typedef typename MatrixType::Scalar Scalar;
358
+ typedef typename MatrixType::RealScalar RealScalar;
359
+ typedef typename MatrixType::Index Index;
360
+
361
+ const Index size = mat.rows();
362
+ eigen_assert(mat.cols() == size && w.size()==size);
363
+
364
+ RealScalar alpha = 1;
365
+
366
+ // Apply the update
367
+ for (Index j = 0; j < size; j++)
368
+ {
369
+ // Check for termination due to an original decomposition of low-rank
370
+ if (!(isfinite)(alpha))
371
+ break;
372
+
373
+ // Update the diagonal terms
374
+ RealScalar dj = numext::real(mat.coeff(j,j));
375
+ Scalar wj = w.coeff(j);
376
+ RealScalar swj2 = sigma*numext::abs2(wj);
377
+ RealScalar gamma = dj*alpha + swj2;
378
+
379
+ mat.coeffRef(j,j) += swj2/alpha;
380
+ alpha += swj2/dj;
381
+
382
+
383
+ // Update the terms of L
384
+ Index rs = size-j-1;
385
+ w.tail(rs) -= wj * mat.col(j).tail(rs);
386
+ if(gamma != 0)
387
+ mat.col(j).tail(rs) += (sigma*numext::conj(wj)/gamma)*w.tail(rs);
388
+ }
389
+ return true;
390
+ }
391
+
392
+ template<typename MatrixType, typename TranspositionType, typename Workspace, typename WType>
393
+ static bool update(MatrixType& mat, const TranspositionType& transpositions, Workspace& tmp, const WType& w, const typename MatrixType::RealScalar& sigma=1)
394
+ {
395
+ // Apply the permutation to the input w
396
+ tmp = transpositions * w;
397
+
398
+ return ldlt_inplace<Lower>::updateInPlace(mat,tmp,sigma);
399
+ }
400
+ };
401
+
402
+ template<> struct ldlt_inplace<Upper>
403
+ {
404
+ template<typename MatrixType, typename TranspositionType, typename Workspace>
405
+ static EIGEN_STRONG_INLINE bool unblocked(MatrixType& mat, TranspositionType& transpositions, Workspace& temp, SignMatrix& sign)
406
+ {
407
+ Transpose<MatrixType> matt(mat);
408
+ return ldlt_inplace<Lower>::unblocked(matt, transpositions, temp, sign);
409
+ }
410
+
411
+ template<typename MatrixType, typename TranspositionType, typename Workspace, typename WType>
412
+ static EIGEN_STRONG_INLINE bool update(MatrixType& mat, TranspositionType& transpositions, Workspace& tmp, WType& w, const typename MatrixType::RealScalar& sigma=1)
413
+ {
414
+ Transpose<MatrixType> matt(mat);
415
+ return ldlt_inplace<Lower>::update(matt, transpositions, tmp, w.conjugate(), sigma);
416
+ }
417
+ };
418
+
419
+ template<typename MatrixType> struct LDLT_Traits<MatrixType,Lower>
420
+ {
421
+ typedef const TriangularView<const MatrixType, UnitLower> MatrixL;
422
+ typedef const TriangularView<const typename MatrixType::AdjointReturnType, UnitUpper> MatrixU;
423
+ static inline MatrixL getL(const MatrixType& m) { return m; }
424
+ static inline MatrixU getU(const MatrixType& m) { return m.adjoint(); }
425
+ };
426
+
427
+ template<typename MatrixType> struct LDLT_Traits<MatrixType,Upper>
428
+ {
429
+ typedef const TriangularView<const typename MatrixType::AdjointReturnType, UnitLower> MatrixL;
430
+ typedef const TriangularView<const MatrixType, UnitUpper> MatrixU;
431
+ static inline MatrixL getL(const MatrixType& m) { return m.adjoint(); }
432
+ static inline MatrixU getU(const MatrixType& m) { return m; }
433
+ };
434
+
435
+ } // end namespace internal
436
+
437
+ /** Compute / recompute the LDLT decomposition A = L D L^* = U^* D U of \a matrix
438
+ */
439
+ template<typename MatrixType, int _UpLo>
440
+ LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::compute(const MatrixType& a)
441
+ {
442
+ check_template_parameters();
443
+
444
+ eigen_assert(a.rows()==a.cols());
445
+ const Index size = a.rows();
446
+
447
+ m_matrix = a;
448
+
449
+ m_transpositions.resize(size);
450
+ m_isInitialized = false;
451
+ m_temporary.resize(size);
452
+ m_sign = internal::ZeroSign;
453
+
454
+ internal::ldlt_inplace<UpLo>::unblocked(m_matrix, m_transpositions, m_temporary, m_sign);
455
+
456
+ m_isInitialized = true;
457
+ return *this;
458
+ }
459
+
460
+ /** Update the LDLT decomposition: given A = L D L^T, efficiently compute the decomposition of A + sigma w w^T.
461
+ * \param w a vector to be incorporated into the decomposition.
462
+ * \param sigma a scalar, +1 for updates and -1 for "downdates," which correspond to removing previously-added column vectors. Optional; default value is +1.
463
+ * \sa setZero()
464
+ */
465
+ template<typename MatrixType, int _UpLo>
466
+ template<typename Derived>
467
+ LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::rankUpdate(const MatrixBase<Derived>& w, const typename LDLT<MatrixType,_UpLo>::RealScalar& sigma)
468
+ {
469
+ const Index size = w.rows();
470
+ if (m_isInitialized)
471
+ {
472
+ eigen_assert(m_matrix.rows()==size);
473
+ }
474
+ else
475
+ {
476
+ m_matrix.resize(size,size);
477
+ m_matrix.setZero();
478
+ m_transpositions.resize(size);
479
+ for (Index i = 0; i < size; i++)
480
+ m_transpositions.coeffRef(i) = i;
481
+ m_temporary.resize(size);
482
+ m_sign = sigma>=0 ? internal::PositiveSemiDef : internal::NegativeSemiDef;
483
+ m_isInitialized = true;
484
+ }
485
+
486
+ internal::ldlt_inplace<UpLo>::update(m_matrix, m_transpositions, m_temporary, w, sigma);
487
+
488
+ return *this;
489
+ }
490
+
491
+ namespace internal {
492
+ template<typename _MatrixType, int _UpLo, typename Rhs>
493
+ struct solve_retval<LDLT<_MatrixType,_UpLo>, Rhs>
494
+ : solve_retval_base<LDLT<_MatrixType,_UpLo>, Rhs>
495
+ {
496
+ typedef LDLT<_MatrixType,_UpLo> LDLTType;
497
+ EIGEN_MAKE_SOLVE_HELPERS(LDLTType,Rhs)
498
+
499
+ template<typename Dest> void evalTo(Dest& dst) const
500
+ {
501
+ eigen_assert(rhs().rows() == dec().matrixLDLT().rows());
502
+ // dst = P b
503
+ dst = dec().transpositionsP() * rhs();
504
+
505
+ // dst = L^-1 (P b)
506
+ dec().matrixL().solveInPlace(dst);
507
+
508
+ // dst = D^-1 (L^-1 P b)
509
+ // more precisely, use pseudo-inverse of D (see bug 241)
510
+ using std::abs;
511
+ using std::max;
512
+ typedef typename LDLTType::MatrixType MatrixType;
513
+ typedef typename LDLTType::RealScalar RealScalar;
514
+ const typename Diagonal<const MatrixType>::RealReturnType vectorD(dec().vectorD());
515
+ // In some previous versions, tolerance was set to the max of 1/highest and the maximal diagonal entry * epsilon
516
+ // as motivated by LAPACK's xGELSS:
517
+ // RealScalar tolerance = (max)(vectorD.array().abs().maxCoeff() *NumTraits<RealScalar>::epsilon(),RealScalar(1) / NumTraits<RealScalar>::highest());
518
+ // However, LDLT is not rank revealing, and so adjusting the tolerance wrt to the highest
519
+ // diagonal element is not well justified and to numerical issues in some cases.
520
+ // Moreover, Lapack's xSYTRS routines use 0 for the tolerance.
521
+ RealScalar tolerance = RealScalar(1) / NumTraits<RealScalar>::highest();
522
+
523
+ for (Index i = 0; i < vectorD.size(); ++i) {
524
+ if(abs(vectorD(i)) > tolerance)
525
+ dst.row(i) /= vectorD(i);
526
+ else
527
+ dst.row(i).setZero();
528
+ }
529
+
530
+ // dst = L^-T (D^-1 L^-1 P b)
531
+ dec().matrixU().solveInPlace(dst);
532
+
533
+ // dst = P^-1 (L^-T D^-1 L^-1 P b) = A^-1 b
534
+ dst = dec().transpositionsP().transpose() * dst;
535
+ }
536
+ };
537
+ }
538
+
539
+ /** \internal use x = ldlt_object.solve(x);
540
+ *
541
+ * This is the \em in-place version of solve().
542
+ *
543
+ * \param bAndX represents both the right-hand side matrix b and result x.
544
+ *
545
+ * \returns true always! If you need to check for existence of solutions, use another decomposition like LU, QR, or SVD.
546
+ *
547
+ * This version avoids a copy when the right hand side matrix b is not
548
+ * needed anymore.
549
+ *
550
+ * \sa LDLT::solve(), MatrixBase::ldlt()
551
+ */
552
+ template<typename MatrixType,int _UpLo>
553
+ template<typename Derived>
554
+ bool LDLT<MatrixType,_UpLo>::solveInPlace(MatrixBase<Derived> &bAndX) const
555
+ {
556
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
557
+ eigen_assert(m_matrix.rows() == bAndX.rows());
558
+
559
+ bAndX = this->solve(bAndX);
560
+
561
+ return true;
562
+ }
563
+
564
+ /** \returns the matrix represented by the decomposition,
565
+ * i.e., it returns the product: P^T L D L^* P.
566
+ * This function is provided for debug purpose. */
567
+ template<typename MatrixType, int _UpLo>
568
+ MatrixType LDLT<MatrixType,_UpLo>::reconstructedMatrix() const
569
+ {
570
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
571
+ const Index size = m_matrix.rows();
572
+ MatrixType res(size,size);
573
+
574
+ // P
575
+ res.setIdentity();
576
+ res = transpositionsP() * res;
577
+ // L^* P
578
+ res = matrixU() * res;
579
+ // D(L^*P)
580
+ res = vectorD().real().asDiagonal() * res;
581
+ // L(DL^*P)
582
+ res = matrixL() * res;
583
+ // P^T (LDL^*P)
584
+ res = transpositionsP().transpose() * res;
585
+
586
+ return res;
587
+ }
588
+
589
+ /** \cholesky_module
590
+ * \returns the Cholesky decomposition with full pivoting without square root of \c *this
591
+ */
592
+ template<typename MatrixType, unsigned int UpLo>
593
+ inline const LDLT<typename SelfAdjointView<MatrixType, UpLo>::PlainObject, UpLo>
594
+ SelfAdjointView<MatrixType, UpLo>::ldlt() const
595
+ {
596
+ return LDLT<PlainObject,UpLo>(m_matrix);
597
+ }
598
+
599
+ /** \cholesky_module
600
+ * \returns the Cholesky decomposition with full pivoting without square root of \c *this
601
+ */
602
+ template<typename Derived>
603
+ inline const LDLT<typename MatrixBase<Derived>::PlainObject>
604
+ MatrixBase<Derived>::ldlt() const
605
+ {
606
+ return LDLT<PlainObject>(derived());
607
+ }
608
+
609
+ } // end namespace Eigen
610
+
611
+ #endif // EIGEN_LDLT_H