ruby-eigen 0.0.9 → 0.0.10.pre1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (293) hide show
  1. checksums.yaml +4 -4
  2. data/LICENSE +22 -0
  3. data/README.md +21 -0
  4. data/ext/eigen/eigen3/COPYING.BSD +26 -0
  5. data/ext/eigen/eigen3/COPYING.MPL2 +373 -0
  6. data/ext/eigen/eigen3/COPYING.README +18 -0
  7. data/ext/eigen/eigen3/Eigen/Array +11 -0
  8. data/ext/eigen/eigen3/Eigen/Cholesky +32 -0
  9. data/ext/eigen/eigen3/Eigen/CholmodSupport +45 -0
  10. data/ext/eigen/eigen3/Eigen/Core +376 -0
  11. data/ext/eigen/eigen3/Eigen/Dense +7 -0
  12. data/ext/eigen/eigen3/Eigen/Eigen +2 -0
  13. data/ext/eigen/eigen3/Eigen/Eigen2Support +95 -0
  14. data/ext/eigen/eigen3/Eigen/Eigenvalues +48 -0
  15. data/ext/eigen/eigen3/Eigen/Geometry +63 -0
  16. data/ext/eigen/eigen3/Eigen/Householder +23 -0
  17. data/ext/eigen/eigen3/Eigen/IterativeLinearSolvers +40 -0
  18. data/ext/eigen/eigen3/Eigen/Jacobi +26 -0
  19. data/ext/eigen/eigen3/Eigen/LU +41 -0
  20. data/ext/eigen/eigen3/Eigen/LeastSquares +32 -0
  21. data/ext/eigen/eigen3/Eigen/MetisSupport +28 -0
  22. data/ext/eigen/eigen3/Eigen/PaStiXSupport +46 -0
  23. data/ext/eigen/eigen3/Eigen/PardisoSupport +30 -0
  24. data/ext/eigen/eigen3/Eigen/QR +45 -0
  25. data/ext/eigen/eigen3/Eigen/QtAlignedMalloc +34 -0
  26. data/ext/eigen/eigen3/Eigen/SPQRSupport +29 -0
  27. data/ext/eigen/eigen3/Eigen/SVD +37 -0
  28. data/ext/eigen/eigen3/Eigen/Sparse +27 -0
  29. data/ext/eigen/eigen3/Eigen/SparseCore +64 -0
  30. data/ext/eigen/eigen3/Eigen/SparseLU +49 -0
  31. data/ext/eigen/eigen3/Eigen/SparseQR +33 -0
  32. data/ext/eigen/eigen3/Eigen/StdDeque +27 -0
  33. data/ext/eigen/eigen3/Eigen/StdList +26 -0
  34. data/ext/eigen/eigen3/Eigen/StdVector +27 -0
  35. data/ext/eigen/eigen3/Eigen/SuperLUSupport +59 -0
  36. data/ext/eigen/eigen3/Eigen/UmfPackSupport +36 -0
  37. data/ext/eigen/eigen3/Eigen/src/Cholesky/LDLT.h +611 -0
  38. data/ext/eigen/eigen3/Eigen/src/Cholesky/LLT.h +498 -0
  39. data/ext/eigen/eigen3/Eigen/src/Cholesky/LLT_MKL.h +102 -0
  40. data/ext/eigen/eigen3/Eigen/src/CholmodSupport/CholmodSupport.h +607 -0
  41. data/ext/eigen/eigen3/Eigen/src/Core/Array.h +323 -0
  42. data/ext/eigen/eigen3/Eigen/src/Core/ArrayBase.h +226 -0
  43. data/ext/eigen/eigen3/Eigen/src/Core/ArrayWrapper.h +264 -0
  44. data/ext/eigen/eigen3/Eigen/src/Core/Assign.h +590 -0
  45. data/ext/eigen/eigen3/Eigen/src/Core/Assign_MKL.h +224 -0
  46. data/ext/eigen/eigen3/Eigen/src/Core/BandMatrix.h +334 -0
  47. data/ext/eigen/eigen3/Eigen/src/Core/Block.h +406 -0
  48. data/ext/eigen/eigen3/Eigen/src/Core/BooleanRedux.h +154 -0
  49. data/ext/eigen/eigen3/Eigen/src/Core/CommaInitializer.h +154 -0
  50. data/ext/eigen/eigen3/Eigen/src/Core/CoreIterators.h +61 -0
  51. data/ext/eigen/eigen3/Eigen/src/Core/CwiseBinaryOp.h +230 -0
  52. data/ext/eigen/eigen3/Eigen/src/Core/CwiseNullaryOp.h +864 -0
  53. data/ext/eigen/eigen3/Eigen/src/Core/CwiseUnaryOp.h +126 -0
  54. data/ext/eigen/eigen3/Eigen/src/Core/CwiseUnaryView.h +139 -0
  55. data/ext/eigen/eigen3/Eigen/src/Core/DenseBase.h +521 -0
  56. data/ext/eigen/eigen3/Eigen/src/Core/DenseCoeffsBase.h +754 -0
  57. data/ext/eigen/eigen3/Eigen/src/Core/DenseStorage.h +434 -0
  58. data/ext/eigen/eigen3/Eigen/src/Core/Diagonal.h +237 -0
  59. data/ext/eigen/eigen3/Eigen/src/Core/DiagonalMatrix.h +313 -0
  60. data/ext/eigen/eigen3/Eigen/src/Core/DiagonalProduct.h +131 -0
  61. data/ext/eigen/eigen3/Eigen/src/Core/Dot.h +263 -0
  62. data/ext/eigen/eigen3/Eigen/src/Core/EigenBase.h +131 -0
  63. data/ext/eigen/eigen3/Eigen/src/Core/Flagged.h +140 -0
  64. data/ext/eigen/eigen3/Eigen/src/Core/ForceAlignedAccess.h +146 -0
  65. data/ext/eigen/eigen3/Eigen/src/Core/Functors.h +1026 -0
  66. data/ext/eigen/eigen3/Eigen/src/Core/Fuzzy.h +150 -0
  67. data/ext/eigen/eigen3/Eigen/src/Core/GeneralProduct.h +635 -0
  68. data/ext/eigen/eigen3/Eigen/src/Core/GenericPacketMath.h +350 -0
  69. data/ext/eigen/eigen3/Eigen/src/Core/GlobalFunctions.h +92 -0
  70. data/ext/eigen/eigen3/Eigen/src/Core/IO.h +250 -0
  71. data/ext/eigen/eigen3/Eigen/src/Core/Map.h +192 -0
  72. data/ext/eigen/eigen3/Eigen/src/Core/MapBase.h +247 -0
  73. data/ext/eigen/eigen3/Eigen/src/Core/MathFunctions.h +768 -0
  74. data/ext/eigen/eigen3/Eigen/src/Core/Matrix.h +420 -0
  75. data/ext/eigen/eigen3/Eigen/src/Core/MatrixBase.h +563 -0
  76. data/ext/eigen/eigen3/Eigen/src/Core/NestByValue.h +111 -0
  77. data/ext/eigen/eigen3/Eigen/src/Core/NoAlias.h +134 -0
  78. data/ext/eigen/eigen3/Eigen/src/Core/NumTraits.h +150 -0
  79. data/ext/eigen/eigen3/Eigen/src/Core/PermutationMatrix.h +721 -0
  80. data/ext/eigen/eigen3/Eigen/src/Core/PlainObjectBase.h +822 -0
  81. data/ext/eigen/eigen3/Eigen/src/Core/ProductBase.h +290 -0
  82. data/ext/eigen/eigen3/Eigen/src/Core/Random.h +152 -0
  83. data/ext/eigen/eigen3/Eigen/src/Core/Redux.h +409 -0
  84. data/ext/eigen/eigen3/Eigen/src/Core/Ref.h +278 -0
  85. data/ext/eigen/eigen3/Eigen/src/Core/Replicate.h +177 -0
  86. data/ext/eigen/eigen3/Eigen/src/Core/ReturnByValue.h +99 -0
  87. data/ext/eigen/eigen3/Eigen/src/Core/Reverse.h +224 -0
  88. data/ext/eigen/eigen3/Eigen/src/Core/Select.h +162 -0
  89. data/ext/eigen/eigen3/Eigen/src/Core/SelfAdjointView.h +314 -0
  90. data/ext/eigen/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h +191 -0
  91. data/ext/eigen/eigen3/Eigen/src/Core/SolveTriangular.h +260 -0
  92. data/ext/eigen/eigen3/Eigen/src/Core/StableNorm.h +203 -0
  93. data/ext/eigen/eigen3/Eigen/src/Core/Stride.h +108 -0
  94. data/ext/eigen/eigen3/Eigen/src/Core/Swap.h +126 -0
  95. data/ext/eigen/eigen3/Eigen/src/Core/Transpose.h +419 -0
  96. data/ext/eigen/eigen3/Eigen/src/Core/Transpositions.h +436 -0
  97. data/ext/eigen/eigen3/Eigen/src/Core/TriangularMatrix.h +839 -0
  98. data/ext/eigen/eigen3/Eigen/src/Core/VectorBlock.h +95 -0
  99. data/ext/eigen/eigen3/Eigen/src/Core/VectorwiseOp.h +642 -0
  100. data/ext/eigen/eigen3/Eigen/src/Core/Visitor.h +237 -0
  101. data/ext/eigen/eigen3/Eigen/src/Core/arch/AltiVec/Complex.h +217 -0
  102. data/ext/eigen/eigen3/Eigen/src/Core/arch/AltiVec/PacketMath.h +501 -0
  103. data/ext/eigen/eigen3/Eigen/src/Core/arch/Default/Settings.h +49 -0
  104. data/ext/eigen/eigen3/Eigen/src/Core/arch/NEON/Complex.h +253 -0
  105. data/ext/eigen/eigen3/Eigen/src/Core/arch/NEON/PacketMath.h +420 -0
  106. data/ext/eigen/eigen3/Eigen/src/Core/arch/SSE/Complex.h +442 -0
  107. data/ext/eigen/eigen3/Eigen/src/Core/arch/SSE/MathFunctions.h +475 -0
  108. data/ext/eigen/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h +649 -0
  109. data/ext/eigen/eigen3/Eigen/src/Core/products/CoeffBasedProduct.h +476 -0
  110. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1341 -0
  111. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h +427 -0
  112. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +278 -0
  113. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_MKL.h +146 -0
  114. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix_MKL.h +118 -0
  115. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixVector.h +566 -0
  116. data/ext/eigen/eigen3/Eigen/src/Core/products/GeneralMatrixVector_MKL.h +131 -0
  117. data/ext/eigen/eigen3/Eigen/src/Core/products/Parallelizer.h +162 -0
  118. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +436 -0
  119. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixMatrix_MKL.h +295 -0
  120. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixVector.h +281 -0
  121. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointMatrixVector_MKL.h +114 -0
  122. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointProduct.h +123 -0
  123. data/ext/eigen/eigen3/Eigen/src/Core/products/SelfadjointRank2Update.h +93 -0
  124. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixMatrix.h +427 -0
  125. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixMatrix_MKL.h +309 -0
  126. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h +348 -0
  127. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularMatrixVector_MKL.h +247 -0
  128. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularSolverMatrix.h +332 -0
  129. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularSolverMatrix_MKL.h +155 -0
  130. data/ext/eigen/eigen3/Eigen/src/Core/products/TriangularSolverVector.h +139 -0
  131. data/ext/eigen/eigen3/Eigen/src/Core/util/BlasUtil.h +264 -0
  132. data/ext/eigen/eigen3/Eigen/src/Core/util/Constants.h +451 -0
  133. data/ext/eigen/eigen3/Eigen/src/Core/util/DisableStupidWarnings.h +40 -0
  134. data/ext/eigen/eigen3/Eigen/src/Core/util/ForwardDeclarations.h +302 -0
  135. data/ext/eigen/eigen3/Eigen/src/Core/util/MKL_support.h +158 -0
  136. data/ext/eigen/eigen3/Eigen/src/Core/util/Macros.h +451 -0
  137. data/ext/eigen/eigen3/Eigen/src/Core/util/Memory.h +977 -0
  138. data/ext/eigen/eigen3/Eigen/src/Core/util/Meta.h +243 -0
  139. data/ext/eigen/eigen3/Eigen/src/Core/util/NonMPL2.h +3 -0
  140. data/ext/eigen/eigen3/Eigen/src/Core/util/ReenableStupidWarnings.h +14 -0
  141. data/ext/eigen/eigen3/Eigen/src/Core/util/StaticAssert.h +208 -0
  142. data/ext/eigen/eigen3/Eigen/src/Core/util/XprHelper.h +469 -0
  143. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Block.h +126 -0
  144. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Cwise.h +192 -0
  145. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/CwiseOperators.h +298 -0
  146. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/AlignedBox.h +159 -0
  147. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/All.h +115 -0
  148. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/AngleAxis.h +214 -0
  149. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Hyperplane.h +254 -0
  150. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/ParametrizedLine.h +141 -0
  151. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Quaternion.h +495 -0
  152. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Rotation2D.h +145 -0
  153. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/RotationBase.h +123 -0
  154. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Scaling.h +167 -0
  155. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Transform.h +786 -0
  156. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Geometry/Translation.h +184 -0
  157. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/LU.h +120 -0
  158. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Lazy.h +71 -0
  159. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/LeastSquares.h +169 -0
  160. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Macros.h +20 -0
  161. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/MathFunctions.h +57 -0
  162. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Memory.h +45 -0
  163. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Meta.h +75 -0
  164. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/Minor.h +117 -0
  165. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/QR.h +67 -0
  166. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/SVD.h +637 -0
  167. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/TriangularSolver.h +42 -0
  168. data/ext/eigen/eigen3/Eigen/src/Eigen2Support/VectorBlock.h +94 -0
  169. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/ComplexEigenSolver.h +341 -0
  170. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/ComplexSchur.h +456 -0
  171. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/ComplexSchur_MKL.h +94 -0
  172. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/EigenSolver.h +607 -0
  173. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +350 -0
  174. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +227 -0
  175. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/HessenbergDecomposition.h +373 -0
  176. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +160 -0
  177. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/RealQZ.h +624 -0
  178. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/RealSchur.h +525 -0
  179. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/RealSchur_MKL.h +83 -0
  180. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +801 -0
  181. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_MKL.h +92 -0
  182. data/ext/eigen/eigen3/Eigen/src/Eigenvalues/Tridiagonalization.h +557 -0
  183. data/ext/eigen/eigen3/Eigen/src/Geometry/AlignedBox.h +392 -0
  184. data/ext/eigen/eigen3/Eigen/src/Geometry/AngleAxis.h +233 -0
  185. data/ext/eigen/eigen3/Eigen/src/Geometry/EulerAngles.h +104 -0
  186. data/ext/eigen/eigen3/Eigen/src/Geometry/Homogeneous.h +307 -0
  187. data/ext/eigen/eigen3/Eigen/src/Geometry/Hyperplane.h +280 -0
  188. data/ext/eigen/eigen3/Eigen/src/Geometry/OrthoMethods.h +218 -0
  189. data/ext/eigen/eigen3/Eigen/src/Geometry/ParametrizedLine.h +195 -0
  190. data/ext/eigen/eigen3/Eigen/src/Geometry/Quaternion.h +776 -0
  191. data/ext/eigen/eigen3/Eigen/src/Geometry/Rotation2D.h +160 -0
  192. data/ext/eigen/eigen3/Eigen/src/Geometry/RotationBase.h +206 -0
  193. data/ext/eigen/eigen3/Eigen/src/Geometry/Scaling.h +166 -0
  194. data/ext/eigen/eigen3/Eigen/src/Geometry/Transform.h +1455 -0
  195. data/ext/eigen/eigen3/Eigen/src/Geometry/Translation.h +206 -0
  196. data/ext/eigen/eigen3/Eigen/src/Geometry/Umeyama.h +177 -0
  197. data/ext/eigen/eigen3/Eigen/src/Geometry/arch/Geometry_SSE.h +115 -0
  198. data/ext/eigen/eigen3/Eigen/src/Householder/BlockHouseholder.h +68 -0
  199. data/ext/eigen/eigen3/Eigen/src/Householder/Householder.h +171 -0
  200. data/ext/eigen/eigen3/Eigen/src/Householder/HouseholderSequence.h +441 -0
  201. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +149 -0
  202. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +263 -0
  203. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +256 -0
  204. data/ext/eigen/eigen3/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +282 -0
  205. data/ext/eigen/eigen3/Eigen/src/Jacobi/Jacobi.h +433 -0
  206. data/ext/eigen/eigen3/Eigen/src/LU/Determinant.h +101 -0
  207. data/ext/eigen/eigen3/Eigen/src/LU/FullPivLU.h +751 -0
  208. data/ext/eigen/eigen3/Eigen/src/LU/Inverse.h +400 -0
  209. data/ext/eigen/eigen3/Eigen/src/LU/PartialPivLU.h +509 -0
  210. data/ext/eigen/eigen3/Eigen/src/LU/PartialPivLU_MKL.h +85 -0
  211. data/ext/eigen/eigen3/Eigen/src/LU/arch/Inverse_SSE.h +329 -0
  212. data/ext/eigen/eigen3/Eigen/src/MetisSupport/MetisSupport.h +137 -0
  213. data/ext/eigen/eigen3/Eigen/src/OrderingMethods/Amd.h +444 -0
  214. data/ext/eigen/eigen3/Eigen/src/OrderingMethods/Eigen_Colamd.h +1850 -0
  215. data/ext/eigen/eigen3/Eigen/src/PaStiXSupport/PaStiXSupport.h +721 -0
  216. data/ext/eigen/eigen3/Eigen/src/PardisoSupport/PardisoSupport.h +592 -0
  217. data/ext/eigen/eigen3/Eigen/src/QR/ColPivHouseholderQR.h +580 -0
  218. data/ext/eigen/eigen3/Eigen/src/QR/ColPivHouseholderQR_MKL.h +99 -0
  219. data/ext/eigen/eigen3/Eigen/src/QR/FullPivHouseholderQR.h +622 -0
  220. data/ext/eigen/eigen3/Eigen/src/QR/HouseholderQR.h +388 -0
  221. data/ext/eigen/eigen3/Eigen/src/QR/HouseholderQR_MKL.h +71 -0
  222. data/ext/eigen/eigen3/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +338 -0
  223. data/ext/eigen/eigen3/Eigen/src/SVD/JacobiSVD.h +976 -0
  224. data/ext/eigen/eigen3/Eigen/src/SVD/JacobiSVD_MKL.h +92 -0
  225. data/ext/eigen/eigen3/Eigen/src/SVD/UpperBidiagonalization.h +148 -0
  226. data/ext/eigen/eigen3/Eigen/src/SparseCholesky/SimplicialCholesky.h +671 -0
  227. data/ext/eigen/eigen3/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +199 -0
  228. data/ext/eigen/eigen3/Eigen/src/SparseCore/AmbiVector.h +373 -0
  229. data/ext/eigen/eigen3/Eigen/src/SparseCore/CompressedStorage.h +233 -0
  230. data/ext/eigen/eigen3/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +245 -0
  231. data/ext/eigen/eigen3/Eigen/src/SparseCore/MappedSparseMatrix.h +181 -0
  232. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseBlock.h +537 -0
  233. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseColEtree.h +206 -0
  234. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +325 -0
  235. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +163 -0
  236. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseDenseProduct.h +311 -0
  237. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseDiagonalProduct.h +196 -0
  238. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseDot.h +101 -0
  239. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseFuzzy.h +26 -0
  240. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseMatrix.h +1262 -0
  241. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseMatrixBase.h +461 -0
  242. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparsePermutation.h +148 -0
  243. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseProduct.h +188 -0
  244. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseRedux.h +45 -0
  245. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseSelfAdjointView.h +507 -0
  246. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +150 -0
  247. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseTranspose.h +63 -0
  248. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseTriangularView.h +179 -0
  249. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseUtil.h +172 -0
  250. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseVector.h +448 -0
  251. data/ext/eigen/eigen3/Eigen/src/SparseCore/SparseView.h +99 -0
  252. data/ext/eigen/eigen3/Eigen/src/SparseCore/TriangularSolver.h +334 -0
  253. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU.h +806 -0
  254. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLUImpl.h +66 -0
  255. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_Memory.h +227 -0
  256. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_Structs.h +111 -0
  257. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +298 -0
  258. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_Utils.h +80 -0
  259. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_column_bmod.h +180 -0
  260. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_column_dfs.h +177 -0
  261. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +106 -0
  262. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +279 -0
  263. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +127 -0
  264. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +130 -0
  265. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_panel_bmod.h +223 -0
  266. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_panel_dfs.h +258 -0
  267. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_pivotL.h +137 -0
  268. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_pruneL.h +135 -0
  269. data/ext/eigen/eigen3/Eigen/src/SparseLU/SparseLU_relax_snode.h +83 -0
  270. data/ext/eigen/eigen3/Eigen/src/SparseQR/SparseQR.h +714 -0
  271. data/ext/eigen/eigen3/Eigen/src/StlSupport/StdDeque.h +134 -0
  272. data/ext/eigen/eigen3/Eigen/src/StlSupport/StdList.h +114 -0
  273. data/ext/eigen/eigen3/Eigen/src/StlSupport/StdVector.h +126 -0
  274. data/ext/eigen/eigen3/Eigen/src/StlSupport/details.h +84 -0
  275. data/ext/eigen/eigen3/Eigen/src/SuperLUSupport/SuperLUSupport.h +1026 -0
  276. data/ext/eigen/eigen3/Eigen/src/UmfPackSupport/UmfPackSupport.h +474 -0
  277. data/ext/eigen/eigen3/Eigen/src/misc/Image.h +84 -0
  278. data/ext/eigen/eigen3/Eigen/src/misc/Kernel.h +81 -0
  279. data/ext/eigen/eigen3/Eigen/src/misc/Solve.h +76 -0
  280. data/ext/eigen/eigen3/Eigen/src/misc/SparseSolve.h +128 -0
  281. data/ext/eigen/eigen3/Eigen/src/misc/blas.h +658 -0
  282. data/ext/eigen/eigen3/Eigen/src/plugins/ArrayCwiseBinaryOps.h +253 -0
  283. data/ext/eigen/eigen3/Eigen/src/plugins/ArrayCwiseUnaryOps.h +187 -0
  284. data/ext/eigen/eigen3/Eigen/src/plugins/BlockMethods.h +935 -0
  285. data/ext/eigen/eigen3/Eigen/src/plugins/CommonCwiseBinaryOps.h +46 -0
  286. data/ext/eigen/eigen3/Eigen/src/plugins/CommonCwiseUnaryOps.h +172 -0
  287. data/ext/eigen/eigen3/Eigen/src/plugins/MatrixCwiseBinaryOps.h +143 -0
  288. data/ext/eigen/eigen3/Eigen/src/plugins/MatrixCwiseUnaryOps.h +52 -0
  289. data/ext/eigen/eigen3/signature_of_eigen3_matrix_library +1 -0
  290. data/ext/eigen/eigen_wrap.cxx +19420 -10396
  291. data/ext/eigen/extconf.rb +37 -2
  292. data/lib/eigen.rb +146 -3
  293. metadata +294 -7
@@ -0,0 +1,59 @@
1
+ #ifndef EIGEN_SUPERLUSUPPORT_MODULE_H
2
+ #define EIGEN_SUPERLUSUPPORT_MODULE_H
3
+
4
+ #include "SparseCore"
5
+
6
+ #include "src/Core/util/DisableStupidWarnings.h"
7
+
8
+ #ifdef EMPTY
9
+ #define EIGEN_EMPTY_WAS_ALREADY_DEFINED
10
+ #endif
11
+
12
+ typedef int int_t;
13
+ #include <slu_Cnames.h>
14
+ #include <supermatrix.h>
15
+ #include <slu_util.h>
16
+
17
+ // slu_util.h defines a preprocessor token named EMPTY which is really polluting,
18
+ // so we remove it in favor of a SUPERLU_EMPTY token.
19
+ // If EMPTY was already defined then we don't undef it.
20
+
21
+ #if defined(EIGEN_EMPTY_WAS_ALREADY_DEFINED)
22
+ # undef EIGEN_EMPTY_WAS_ALREADY_DEFINED
23
+ #elif defined(EMPTY)
24
+ # undef EMPTY
25
+ #endif
26
+
27
+ #define SUPERLU_EMPTY (-1)
28
+
29
+ namespace Eigen { struct SluMatrix; }
30
+
31
+ /** \ingroup Support_modules
32
+ * \defgroup SuperLUSupport_Module SuperLUSupport module
33
+ *
34
+ * This module provides an interface to the <a href="http://crd-legacy.lbl.gov/~xiaoye/SuperLU/">SuperLU</a> library.
35
+ * It provides the following factorization class:
36
+ * - class SuperLU: a supernodal sequential LU factorization.
37
+ * - class SuperILU: a supernodal sequential incomplete LU factorization (to be used as a preconditioner for iterative methods).
38
+ *
39
+ * \warning When including this module, you have to use SUPERLU_EMPTY instead of EMPTY which is no longer defined because it is too polluting.
40
+ *
41
+ * \code
42
+ * #include <Eigen/SuperLUSupport>
43
+ * \endcode
44
+ *
45
+ * In order to use this module, the superlu headers must be accessible from the include paths, and your binary must be linked to the superlu library and its dependencies.
46
+ * The dependencies depend on how superlu has been compiled.
47
+ * For a cmake based project, you can use our FindSuperLU.cmake module to help you in this task.
48
+ *
49
+ */
50
+
51
+ #include "src/misc/Solve.h"
52
+ #include "src/misc/SparseSolve.h"
53
+
54
+ #include "src/SuperLUSupport/SuperLUSupport.h"
55
+
56
+
57
+ #include "src/Core/util/ReenableStupidWarnings.h"
58
+
59
+ #endif // EIGEN_SUPERLUSUPPORT_MODULE_H
@@ -0,0 +1,36 @@
1
+ #ifndef EIGEN_UMFPACKSUPPORT_MODULE_H
2
+ #define EIGEN_UMFPACKSUPPORT_MODULE_H
3
+
4
+ #include "SparseCore"
5
+
6
+ #include "src/Core/util/DisableStupidWarnings.h"
7
+
8
+ extern "C" {
9
+ #include <umfpack.h>
10
+ }
11
+
12
+ /** \ingroup Support_modules
13
+ * \defgroup UmfPackSupport_Module UmfPackSupport module
14
+ *
15
+ * This module provides an interface to the UmfPack library which is part of the <a href="http://www.cise.ufl.edu/research/sparse/SuiteSparse/">suitesparse</a> package.
16
+ * It provides the following factorization class:
17
+ * - class UmfPackLU: a multifrontal sequential LU factorization.
18
+ *
19
+ * \code
20
+ * #include <Eigen/UmfPackSupport>
21
+ * \endcode
22
+ *
23
+ * In order to use this module, the umfpack headers must be accessible from the include paths, and your binary must be linked to the umfpack library and its dependencies.
24
+ * The dependencies depend on how umfpack has been compiled.
25
+ * For a cmake based project, you can use our FindUmfPack.cmake module to help you in this task.
26
+ *
27
+ */
28
+
29
+ #include "src/misc/Solve.h"
30
+ #include "src/misc/SparseSolve.h"
31
+
32
+ #include "src/UmfPackSupport/UmfPackSupport.h"
33
+
34
+ #include "src/Core/util/ReenableStupidWarnings.h"
35
+
36
+ #endif // EIGEN_UMFPACKSUPPORT_MODULE_H
@@ -0,0 +1,611 @@
1
+ // This file is part of Eigen, a lightweight C++ template library
2
+ // for linear algebra.
3
+ //
4
+ // Copyright (C) 2008-2011 Gael Guennebaud <gael.guennebaud@inria.fr>
5
+ // Copyright (C) 2009 Keir Mierle <mierle@gmail.com>
6
+ // Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
7
+ // Copyright (C) 2011 Timothy E. Holy <tim.holy@gmail.com >
8
+ //
9
+ // This Source Code Form is subject to the terms of the Mozilla
10
+ // Public License v. 2.0. If a copy of the MPL was not distributed
11
+ // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
12
+
13
+ #ifndef EIGEN_LDLT_H
14
+ #define EIGEN_LDLT_H
15
+
16
+ namespace Eigen {
17
+
18
+ namespace internal {
19
+ template<typename MatrixType, int UpLo> struct LDLT_Traits;
20
+
21
+ // PositiveSemiDef means positive semi-definite and non-zero; same for NegativeSemiDef
22
+ enum SignMatrix { PositiveSemiDef, NegativeSemiDef, ZeroSign, Indefinite };
23
+ }
24
+
25
+ /** \ingroup Cholesky_Module
26
+ *
27
+ * \class LDLT
28
+ *
29
+ * \brief Robust Cholesky decomposition of a matrix with pivoting
30
+ *
31
+ * \param MatrixType the type of the matrix of which to compute the LDL^T Cholesky decomposition
32
+ * \param UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
33
+ * The other triangular part won't be read.
34
+ *
35
+ * Perform a robust Cholesky decomposition of a positive semidefinite or negative semidefinite
36
+ * matrix \f$ A \f$ such that \f$ A = P^TLDL^*P \f$, where P is a permutation matrix, L
37
+ * is lower triangular with a unit diagonal and D is a diagonal matrix.
38
+ *
39
+ * The decomposition uses pivoting to ensure stability, so that L will have
40
+ * zeros in the bottom right rank(A) - n submatrix. Avoiding the square root
41
+ * on D also stabilizes the computation.
42
+ *
43
+ * Remember that Cholesky decompositions are not rank-revealing. Also, do not use a Cholesky
44
+ * decomposition to determine whether a system of equations has a solution.
45
+ *
46
+ * \sa MatrixBase::ldlt(), class LLT
47
+ */
48
+ template<typename _MatrixType, int _UpLo> class LDLT
49
+ {
50
+ public:
51
+ typedef _MatrixType MatrixType;
52
+ enum {
53
+ RowsAtCompileTime = MatrixType::RowsAtCompileTime,
54
+ ColsAtCompileTime = MatrixType::ColsAtCompileTime,
55
+ Options = MatrixType::Options & ~RowMajorBit, // these are the options for the TmpMatrixType, we need a ColMajor matrix here!
56
+ MaxRowsAtCompileTime = MatrixType::MaxRowsAtCompileTime,
57
+ MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime,
58
+ UpLo = _UpLo
59
+ };
60
+ typedef typename MatrixType::Scalar Scalar;
61
+ typedef typename NumTraits<typename MatrixType::Scalar>::Real RealScalar;
62
+ typedef typename MatrixType::Index Index;
63
+ typedef Matrix<Scalar, RowsAtCompileTime, 1, Options, MaxRowsAtCompileTime, 1> TmpMatrixType;
64
+
65
+ typedef Transpositions<RowsAtCompileTime, MaxRowsAtCompileTime> TranspositionType;
66
+ typedef PermutationMatrix<RowsAtCompileTime, MaxRowsAtCompileTime> PermutationType;
67
+
68
+ typedef internal::LDLT_Traits<MatrixType,UpLo> Traits;
69
+
70
+ /** \brief Default Constructor.
71
+ *
72
+ * The default constructor is useful in cases in which the user intends to
73
+ * perform decompositions via LDLT::compute(const MatrixType&).
74
+ */
75
+ LDLT()
76
+ : m_matrix(),
77
+ m_transpositions(),
78
+ m_sign(internal::ZeroSign),
79
+ m_isInitialized(false)
80
+ {}
81
+
82
+ /** \brief Default Constructor with memory preallocation
83
+ *
84
+ * Like the default constructor but with preallocation of the internal data
85
+ * according to the specified problem \a size.
86
+ * \sa LDLT()
87
+ */
88
+ LDLT(Index size)
89
+ : m_matrix(size, size),
90
+ m_transpositions(size),
91
+ m_temporary(size),
92
+ m_sign(internal::ZeroSign),
93
+ m_isInitialized(false)
94
+ {}
95
+
96
+ /** \brief Constructor with decomposition
97
+ *
98
+ * This calculates the decomposition for the input \a matrix.
99
+ * \sa LDLT(Index size)
100
+ */
101
+ LDLT(const MatrixType& matrix)
102
+ : m_matrix(matrix.rows(), matrix.cols()),
103
+ m_transpositions(matrix.rows()),
104
+ m_temporary(matrix.rows()),
105
+ m_sign(internal::ZeroSign),
106
+ m_isInitialized(false)
107
+ {
108
+ compute(matrix);
109
+ }
110
+
111
+ /** Clear any existing decomposition
112
+ * \sa rankUpdate(w,sigma)
113
+ */
114
+ void setZero()
115
+ {
116
+ m_isInitialized = false;
117
+ }
118
+
119
+ /** \returns a view of the upper triangular matrix U */
120
+ inline typename Traits::MatrixU matrixU() const
121
+ {
122
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
123
+ return Traits::getU(m_matrix);
124
+ }
125
+
126
+ /** \returns a view of the lower triangular matrix L */
127
+ inline typename Traits::MatrixL matrixL() const
128
+ {
129
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
130
+ return Traits::getL(m_matrix);
131
+ }
132
+
133
+ /** \returns the permutation matrix P as a transposition sequence.
134
+ */
135
+ inline const TranspositionType& transpositionsP() const
136
+ {
137
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
138
+ return m_transpositions;
139
+ }
140
+
141
+ /** \returns the coefficients of the diagonal matrix D */
142
+ inline Diagonal<const MatrixType> vectorD() const
143
+ {
144
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
145
+ return m_matrix.diagonal();
146
+ }
147
+
148
+ /** \returns true if the matrix is positive (semidefinite) */
149
+ inline bool isPositive() const
150
+ {
151
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
152
+ return m_sign == internal::PositiveSemiDef || m_sign == internal::ZeroSign;
153
+ }
154
+
155
+ #ifdef EIGEN2_SUPPORT
156
+ inline bool isPositiveDefinite() const
157
+ {
158
+ return isPositive();
159
+ }
160
+ #endif
161
+
162
+ /** \returns true if the matrix is negative (semidefinite) */
163
+ inline bool isNegative(void) const
164
+ {
165
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
166
+ return m_sign == internal::NegativeSemiDef || m_sign == internal::ZeroSign;
167
+ }
168
+
169
+ /** \returns a solution x of \f$ A x = b \f$ using the current decomposition of A.
170
+ *
171
+ * This function also supports in-place solves using the syntax <tt>x = decompositionObject.solve(x)</tt> .
172
+ *
173
+ * \note_about_checking_solutions
174
+ *
175
+ * More precisely, this method solves \f$ A x = b \f$ using the decomposition \f$ A = P^T L D L^* P \f$
176
+ * by solving the systems \f$ P^T y_1 = b \f$, \f$ L y_2 = y_1 \f$, \f$ D y_3 = y_2 \f$,
177
+ * \f$ L^* y_4 = y_3 \f$ and \f$ P x = y_4 \f$ in succession. If the matrix \f$ A \f$ is singular, then
178
+ * \f$ D \f$ will also be singular (all the other matrices are invertible). In that case, the
179
+ * least-square solution of \f$ D y_3 = y_2 \f$ is computed. This does not mean that this function
180
+ * computes the least-square solution of \f$ A x = b \f$ is \f$ A \f$ is singular.
181
+ *
182
+ * \sa MatrixBase::ldlt()
183
+ */
184
+ template<typename Rhs>
185
+ inline const internal::solve_retval<LDLT, Rhs>
186
+ solve(const MatrixBase<Rhs>& b) const
187
+ {
188
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
189
+ eigen_assert(m_matrix.rows()==b.rows()
190
+ && "LDLT::solve(): invalid number of rows of the right hand side matrix b");
191
+ return internal::solve_retval<LDLT, Rhs>(*this, b.derived());
192
+ }
193
+
194
+ #ifdef EIGEN2_SUPPORT
195
+ template<typename OtherDerived, typename ResultType>
196
+ bool solve(const MatrixBase<OtherDerived>& b, ResultType *result) const
197
+ {
198
+ *result = this->solve(b);
199
+ return true;
200
+ }
201
+ #endif
202
+
203
+ template<typename Derived>
204
+ bool solveInPlace(MatrixBase<Derived> &bAndX) const;
205
+
206
+ LDLT& compute(const MatrixType& matrix);
207
+
208
+ template <typename Derived>
209
+ LDLT& rankUpdate(const MatrixBase<Derived>& w, const RealScalar& alpha=1);
210
+
211
+ /** \returns the internal LDLT decomposition matrix
212
+ *
213
+ * TODO: document the storage layout
214
+ */
215
+ inline const MatrixType& matrixLDLT() const
216
+ {
217
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
218
+ return m_matrix;
219
+ }
220
+
221
+ MatrixType reconstructedMatrix() const;
222
+
223
+ inline Index rows() const { return m_matrix.rows(); }
224
+ inline Index cols() const { return m_matrix.cols(); }
225
+
226
+ /** \brief Reports whether previous computation was successful.
227
+ *
228
+ * \returns \c Success if computation was succesful,
229
+ * \c NumericalIssue if the matrix.appears to be negative.
230
+ */
231
+ ComputationInfo info() const
232
+ {
233
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
234
+ return Success;
235
+ }
236
+
237
+ protected:
238
+
239
+ static void check_template_parameters()
240
+ {
241
+ EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
242
+ }
243
+
244
+ /** \internal
245
+ * Used to compute and store the Cholesky decomposition A = L D L^* = U^* D U.
246
+ * The strict upper part is used during the decomposition, the strict lower
247
+ * part correspond to the coefficients of L (its diagonal is equal to 1 and
248
+ * is not stored), and the diagonal entries correspond to D.
249
+ */
250
+ MatrixType m_matrix;
251
+ TranspositionType m_transpositions;
252
+ TmpMatrixType m_temporary;
253
+ internal::SignMatrix m_sign;
254
+ bool m_isInitialized;
255
+ };
256
+
257
+ namespace internal {
258
+
259
+ template<int UpLo> struct ldlt_inplace;
260
+
261
+ template<> struct ldlt_inplace<Lower>
262
+ {
263
+ template<typename MatrixType, typename TranspositionType, typename Workspace>
264
+ static bool unblocked(MatrixType& mat, TranspositionType& transpositions, Workspace& temp, SignMatrix& sign)
265
+ {
266
+ using std::abs;
267
+ typedef typename MatrixType::Scalar Scalar;
268
+ typedef typename MatrixType::RealScalar RealScalar;
269
+ typedef typename MatrixType::Index Index;
270
+ eigen_assert(mat.rows()==mat.cols());
271
+ const Index size = mat.rows();
272
+
273
+ if (size <= 1)
274
+ {
275
+ transpositions.setIdentity();
276
+ if (numext::real(mat.coeff(0,0)) > 0) sign = PositiveSemiDef;
277
+ else if (numext::real(mat.coeff(0,0)) < 0) sign = NegativeSemiDef;
278
+ else sign = ZeroSign;
279
+ return true;
280
+ }
281
+
282
+ for (Index k = 0; k < size; ++k)
283
+ {
284
+ // Find largest diagonal element
285
+ Index index_of_biggest_in_corner;
286
+ mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner);
287
+ index_of_biggest_in_corner += k;
288
+
289
+ transpositions.coeffRef(k) = index_of_biggest_in_corner;
290
+ if(k != index_of_biggest_in_corner)
291
+ {
292
+ // apply the transposition while taking care to consider only
293
+ // the lower triangular part
294
+ Index s = size-index_of_biggest_in_corner-1; // trailing size after the biggest element
295
+ mat.row(k).head(k).swap(mat.row(index_of_biggest_in_corner).head(k));
296
+ mat.col(k).tail(s).swap(mat.col(index_of_biggest_in_corner).tail(s));
297
+ std::swap(mat.coeffRef(k,k),mat.coeffRef(index_of_biggest_in_corner,index_of_biggest_in_corner));
298
+ for(int i=k+1;i<index_of_biggest_in_corner;++i)
299
+ {
300
+ Scalar tmp = mat.coeffRef(i,k);
301
+ mat.coeffRef(i,k) = numext::conj(mat.coeffRef(index_of_biggest_in_corner,i));
302
+ mat.coeffRef(index_of_biggest_in_corner,i) = numext::conj(tmp);
303
+ }
304
+ if(NumTraits<Scalar>::IsComplex)
305
+ mat.coeffRef(index_of_biggest_in_corner,k) = numext::conj(mat.coeff(index_of_biggest_in_corner,k));
306
+ }
307
+
308
+ // partition the matrix:
309
+ // A00 | - | -
310
+ // lu = A10 | A11 | -
311
+ // A20 | A21 | A22
312
+ Index rs = size - k - 1;
313
+ Block<MatrixType,Dynamic,1> A21(mat,k+1,k,rs,1);
314
+ Block<MatrixType,1,Dynamic> A10(mat,k,0,1,k);
315
+ Block<MatrixType,Dynamic,Dynamic> A20(mat,k+1,0,rs,k);
316
+
317
+ if(k>0)
318
+ {
319
+ temp.head(k) = mat.diagonal().real().head(k).asDiagonal() * A10.adjoint();
320
+ mat.coeffRef(k,k) -= (A10 * temp.head(k)).value();
321
+ if(rs>0)
322
+ A21.noalias() -= A20 * temp.head(k);
323
+ }
324
+
325
+ // In some previous versions of Eigen (e.g., 3.2.1), the scaling was omitted if the pivot
326
+ // was smaller than the cutoff value. However, soince LDLT is not rank-revealing
327
+ // we should only make sure we do not introduce INF or NaN values.
328
+ // LAPACK also uses 0 as the cutoff value.
329
+ RealScalar realAkk = numext::real(mat.coeffRef(k,k));
330
+ if((rs>0) && (abs(realAkk) > RealScalar(0)))
331
+ A21 /= realAkk;
332
+
333
+ if (sign == PositiveSemiDef) {
334
+ if (realAkk < 0) sign = Indefinite;
335
+ } else if (sign == NegativeSemiDef) {
336
+ if (realAkk > 0) sign = Indefinite;
337
+ } else if (sign == ZeroSign) {
338
+ if (realAkk > 0) sign = PositiveSemiDef;
339
+ else if (realAkk < 0) sign = NegativeSemiDef;
340
+ }
341
+ }
342
+
343
+ return true;
344
+ }
345
+
346
+ // Reference for the algorithm: Davis and Hager, "Multiple Rank
347
+ // Modifications of a Sparse Cholesky Factorization" (Algorithm 1)
348
+ // Trivial rearrangements of their computations (Timothy E. Holy)
349
+ // allow their algorithm to work for rank-1 updates even if the
350
+ // original matrix is not of full rank.
351
+ // Here only rank-1 updates are implemented, to reduce the
352
+ // requirement for intermediate storage and improve accuracy
353
+ template<typename MatrixType, typename WDerived>
354
+ static bool updateInPlace(MatrixType& mat, MatrixBase<WDerived>& w, const typename MatrixType::RealScalar& sigma=1)
355
+ {
356
+ using numext::isfinite;
357
+ typedef typename MatrixType::Scalar Scalar;
358
+ typedef typename MatrixType::RealScalar RealScalar;
359
+ typedef typename MatrixType::Index Index;
360
+
361
+ const Index size = mat.rows();
362
+ eigen_assert(mat.cols() == size && w.size()==size);
363
+
364
+ RealScalar alpha = 1;
365
+
366
+ // Apply the update
367
+ for (Index j = 0; j < size; j++)
368
+ {
369
+ // Check for termination due to an original decomposition of low-rank
370
+ if (!(isfinite)(alpha))
371
+ break;
372
+
373
+ // Update the diagonal terms
374
+ RealScalar dj = numext::real(mat.coeff(j,j));
375
+ Scalar wj = w.coeff(j);
376
+ RealScalar swj2 = sigma*numext::abs2(wj);
377
+ RealScalar gamma = dj*alpha + swj2;
378
+
379
+ mat.coeffRef(j,j) += swj2/alpha;
380
+ alpha += swj2/dj;
381
+
382
+
383
+ // Update the terms of L
384
+ Index rs = size-j-1;
385
+ w.tail(rs) -= wj * mat.col(j).tail(rs);
386
+ if(gamma != 0)
387
+ mat.col(j).tail(rs) += (sigma*numext::conj(wj)/gamma)*w.tail(rs);
388
+ }
389
+ return true;
390
+ }
391
+
392
+ template<typename MatrixType, typename TranspositionType, typename Workspace, typename WType>
393
+ static bool update(MatrixType& mat, const TranspositionType& transpositions, Workspace& tmp, const WType& w, const typename MatrixType::RealScalar& sigma=1)
394
+ {
395
+ // Apply the permutation to the input w
396
+ tmp = transpositions * w;
397
+
398
+ return ldlt_inplace<Lower>::updateInPlace(mat,tmp,sigma);
399
+ }
400
+ };
401
+
402
+ template<> struct ldlt_inplace<Upper>
403
+ {
404
+ template<typename MatrixType, typename TranspositionType, typename Workspace>
405
+ static EIGEN_STRONG_INLINE bool unblocked(MatrixType& mat, TranspositionType& transpositions, Workspace& temp, SignMatrix& sign)
406
+ {
407
+ Transpose<MatrixType> matt(mat);
408
+ return ldlt_inplace<Lower>::unblocked(matt, transpositions, temp, sign);
409
+ }
410
+
411
+ template<typename MatrixType, typename TranspositionType, typename Workspace, typename WType>
412
+ static EIGEN_STRONG_INLINE bool update(MatrixType& mat, TranspositionType& transpositions, Workspace& tmp, WType& w, const typename MatrixType::RealScalar& sigma=1)
413
+ {
414
+ Transpose<MatrixType> matt(mat);
415
+ return ldlt_inplace<Lower>::update(matt, transpositions, tmp, w.conjugate(), sigma);
416
+ }
417
+ };
418
+
419
+ template<typename MatrixType> struct LDLT_Traits<MatrixType,Lower>
420
+ {
421
+ typedef const TriangularView<const MatrixType, UnitLower> MatrixL;
422
+ typedef const TriangularView<const typename MatrixType::AdjointReturnType, UnitUpper> MatrixU;
423
+ static inline MatrixL getL(const MatrixType& m) { return m; }
424
+ static inline MatrixU getU(const MatrixType& m) { return m.adjoint(); }
425
+ };
426
+
427
+ template<typename MatrixType> struct LDLT_Traits<MatrixType,Upper>
428
+ {
429
+ typedef const TriangularView<const typename MatrixType::AdjointReturnType, UnitLower> MatrixL;
430
+ typedef const TriangularView<const MatrixType, UnitUpper> MatrixU;
431
+ static inline MatrixL getL(const MatrixType& m) { return m.adjoint(); }
432
+ static inline MatrixU getU(const MatrixType& m) { return m; }
433
+ };
434
+
435
+ } // end namespace internal
436
+
437
+ /** Compute / recompute the LDLT decomposition A = L D L^* = U^* D U of \a matrix
438
+ */
439
+ template<typename MatrixType, int _UpLo>
440
+ LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::compute(const MatrixType& a)
441
+ {
442
+ check_template_parameters();
443
+
444
+ eigen_assert(a.rows()==a.cols());
445
+ const Index size = a.rows();
446
+
447
+ m_matrix = a;
448
+
449
+ m_transpositions.resize(size);
450
+ m_isInitialized = false;
451
+ m_temporary.resize(size);
452
+ m_sign = internal::ZeroSign;
453
+
454
+ internal::ldlt_inplace<UpLo>::unblocked(m_matrix, m_transpositions, m_temporary, m_sign);
455
+
456
+ m_isInitialized = true;
457
+ return *this;
458
+ }
459
+
460
+ /** Update the LDLT decomposition: given A = L D L^T, efficiently compute the decomposition of A + sigma w w^T.
461
+ * \param w a vector to be incorporated into the decomposition.
462
+ * \param sigma a scalar, +1 for updates and -1 for "downdates," which correspond to removing previously-added column vectors. Optional; default value is +1.
463
+ * \sa setZero()
464
+ */
465
+ template<typename MatrixType, int _UpLo>
466
+ template<typename Derived>
467
+ LDLT<MatrixType,_UpLo>& LDLT<MatrixType,_UpLo>::rankUpdate(const MatrixBase<Derived>& w, const typename LDLT<MatrixType,_UpLo>::RealScalar& sigma)
468
+ {
469
+ const Index size = w.rows();
470
+ if (m_isInitialized)
471
+ {
472
+ eigen_assert(m_matrix.rows()==size);
473
+ }
474
+ else
475
+ {
476
+ m_matrix.resize(size,size);
477
+ m_matrix.setZero();
478
+ m_transpositions.resize(size);
479
+ for (Index i = 0; i < size; i++)
480
+ m_transpositions.coeffRef(i) = i;
481
+ m_temporary.resize(size);
482
+ m_sign = sigma>=0 ? internal::PositiveSemiDef : internal::NegativeSemiDef;
483
+ m_isInitialized = true;
484
+ }
485
+
486
+ internal::ldlt_inplace<UpLo>::update(m_matrix, m_transpositions, m_temporary, w, sigma);
487
+
488
+ return *this;
489
+ }
490
+
491
+ namespace internal {
492
+ template<typename _MatrixType, int _UpLo, typename Rhs>
493
+ struct solve_retval<LDLT<_MatrixType,_UpLo>, Rhs>
494
+ : solve_retval_base<LDLT<_MatrixType,_UpLo>, Rhs>
495
+ {
496
+ typedef LDLT<_MatrixType,_UpLo> LDLTType;
497
+ EIGEN_MAKE_SOLVE_HELPERS(LDLTType,Rhs)
498
+
499
+ template<typename Dest> void evalTo(Dest& dst) const
500
+ {
501
+ eigen_assert(rhs().rows() == dec().matrixLDLT().rows());
502
+ // dst = P b
503
+ dst = dec().transpositionsP() * rhs();
504
+
505
+ // dst = L^-1 (P b)
506
+ dec().matrixL().solveInPlace(dst);
507
+
508
+ // dst = D^-1 (L^-1 P b)
509
+ // more precisely, use pseudo-inverse of D (see bug 241)
510
+ using std::abs;
511
+ using std::max;
512
+ typedef typename LDLTType::MatrixType MatrixType;
513
+ typedef typename LDLTType::RealScalar RealScalar;
514
+ const typename Diagonal<const MatrixType>::RealReturnType vectorD(dec().vectorD());
515
+ // In some previous versions, tolerance was set to the max of 1/highest and the maximal diagonal entry * epsilon
516
+ // as motivated by LAPACK's xGELSS:
517
+ // RealScalar tolerance = (max)(vectorD.array().abs().maxCoeff() *NumTraits<RealScalar>::epsilon(),RealScalar(1) / NumTraits<RealScalar>::highest());
518
+ // However, LDLT is not rank revealing, and so adjusting the tolerance wrt to the highest
519
+ // diagonal element is not well justified and to numerical issues in some cases.
520
+ // Moreover, Lapack's xSYTRS routines use 0 for the tolerance.
521
+ RealScalar tolerance = RealScalar(1) / NumTraits<RealScalar>::highest();
522
+
523
+ for (Index i = 0; i < vectorD.size(); ++i) {
524
+ if(abs(vectorD(i)) > tolerance)
525
+ dst.row(i) /= vectorD(i);
526
+ else
527
+ dst.row(i).setZero();
528
+ }
529
+
530
+ // dst = L^-T (D^-1 L^-1 P b)
531
+ dec().matrixU().solveInPlace(dst);
532
+
533
+ // dst = P^-1 (L^-T D^-1 L^-1 P b) = A^-1 b
534
+ dst = dec().transpositionsP().transpose() * dst;
535
+ }
536
+ };
537
+ }
538
+
539
+ /** \internal use x = ldlt_object.solve(x);
540
+ *
541
+ * This is the \em in-place version of solve().
542
+ *
543
+ * \param bAndX represents both the right-hand side matrix b and result x.
544
+ *
545
+ * \returns true always! If you need to check for existence of solutions, use another decomposition like LU, QR, or SVD.
546
+ *
547
+ * This version avoids a copy when the right hand side matrix b is not
548
+ * needed anymore.
549
+ *
550
+ * \sa LDLT::solve(), MatrixBase::ldlt()
551
+ */
552
+ template<typename MatrixType,int _UpLo>
553
+ template<typename Derived>
554
+ bool LDLT<MatrixType,_UpLo>::solveInPlace(MatrixBase<Derived> &bAndX) const
555
+ {
556
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
557
+ eigen_assert(m_matrix.rows() == bAndX.rows());
558
+
559
+ bAndX = this->solve(bAndX);
560
+
561
+ return true;
562
+ }
563
+
564
+ /** \returns the matrix represented by the decomposition,
565
+ * i.e., it returns the product: P^T L D L^* P.
566
+ * This function is provided for debug purpose. */
567
+ template<typename MatrixType, int _UpLo>
568
+ MatrixType LDLT<MatrixType,_UpLo>::reconstructedMatrix() const
569
+ {
570
+ eigen_assert(m_isInitialized && "LDLT is not initialized.");
571
+ const Index size = m_matrix.rows();
572
+ MatrixType res(size,size);
573
+
574
+ // P
575
+ res.setIdentity();
576
+ res = transpositionsP() * res;
577
+ // L^* P
578
+ res = matrixU() * res;
579
+ // D(L^*P)
580
+ res = vectorD().real().asDiagonal() * res;
581
+ // L(DL^*P)
582
+ res = matrixL() * res;
583
+ // P^T (LDL^*P)
584
+ res = transpositionsP().transpose() * res;
585
+
586
+ return res;
587
+ }
588
+
589
+ /** \cholesky_module
590
+ * \returns the Cholesky decomposition with full pivoting without square root of \c *this
591
+ */
592
+ template<typename MatrixType, unsigned int UpLo>
593
+ inline const LDLT<typename SelfAdjointView<MatrixType, UpLo>::PlainObject, UpLo>
594
+ SelfAdjointView<MatrixType, UpLo>::ldlt() const
595
+ {
596
+ return LDLT<PlainObject,UpLo>(m_matrix);
597
+ }
598
+
599
+ /** \cholesky_module
600
+ * \returns the Cholesky decomposition with full pivoting without square root of \c *this
601
+ */
602
+ template<typename Derived>
603
+ inline const LDLT<typename MatrixBase<Derived>::PlainObject>
604
+ MatrixBase<Derived>::ldlt() const
605
+ {
606
+ return LDLT<PlainObject>(derived());
607
+ }
608
+
609
+ } // end namespace Eigen
610
+
611
+ #endif // EIGEN_LDLT_H