ojxv 0.0.2 → 1.0.0

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Files changed (913) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +77 -2
  3. data/lib/ojxv/crossref_metadata_file.rb +49 -0
  4. data/lib/ojxv/jats_file.rb +64 -0
  5. data/lib/ojxv/schemas/crossref/AccessIndicators.xsd +64 -0
  6. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-3d2-mathml3-elements.xsd +10130 -0
  7. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-3d2-mathml3.xsd +48 -0
  8. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-elements.xsd +8705 -0
  9. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-mathml3-elements.xsd +8608 -0
  10. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-mathml3.xsd +49 -0
  11. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1.xsd +6176 -0
  12. data/lib/ojxv/schemas/crossref/NLM.JATS2CrossRef.v1.0.xsl +554 -0
  13. data/lib/ojxv/schemas/crossref/NLM2CrossRef.xsl +577 -0
  14. data/lib/ojxv/schemas/crossref/OAI-PMH.cr.xsd +280 -0
  15. data/lib/ojxv/schemas/crossref/OAI-PMH.xsd +317 -0
  16. data/lib/ojxv/schemas/crossref/clinicaltrials.xsd +61 -0
  17. data/lib/ojxv/schemas/crossref/common4.8.0.xsd +1606 -0
  18. data/lib/ojxv/schemas/crossref/common4.8.1.xsd +1606 -0
  19. data/lib/ojxv/schemas/crossref/common5.1.0.xsd +1606 -0
  20. data/lib/ojxv/schemas/crossref/common5.2.0.xsd +1606 -0
  21. data/lib/ojxv/schemas/crossref/common5.3.0.xsd +1606 -0
  22. data/lib/ojxv/schemas/crossref/common5.3.1.xsd +1606 -0
  23. data/lib/ojxv/schemas/crossref/crossref4.8.0.xsd +2042 -0
  24. data/lib/ojxv/schemas/crossref/crossref4.8.1.xsd +2042 -0
  25. data/lib/ojxv/schemas/crossref/crossref5.1.0.xsd +2075 -0
  26. data/lib/ojxv/schemas/crossref/crossref5.2.0.xsd +2077 -0
  27. data/lib/ojxv/schemas/crossref/crossref5.3.0.xsd +2065 -0
  28. data/lib/ojxv/schemas/crossref/crossref5.3.1.xsd +2065 -0
  29. data/lib/ojxv/schemas/crossref/crossref_citations_1.0.0.xsd +48 -0
  30. data/lib/ojxv/schemas/crossref/crossref_output3.0.0.xsd +1124 -0
  31. data/lib/ojxv/schemas/crossref/crossref_output3.0.1.xsd +1949 -0
  32. data/lib/ojxv/schemas/crossref/crossref_query_input1.0.xsd +587 -0
  33. data/lib/ojxv/schemas/crossref/crossref_query_input2.0.xsd +845 -0
  34. data/lib/ojxv/schemas/crossref/crossref_query_output1.0.xsd +499 -0
  35. data/lib/ojxv/schemas/crossref/crossref_query_output2.0.xsd +1052 -0
  36. data/lib/ojxv/schemas/crossref/crossref_query_output3.0.xsd +1169 -0
  37. data/lib/ojxv/schemas/crossref/fundref.xsd +85 -0
  38. data/lib/ojxv/schemas/crossref/fundrefoutput.xsd +38 -0
  39. data/lib/ojxv/schemas/crossref/grant_id0.0.1.xsd +1076 -0
  40. data/lib/ojxv/schemas/crossref/grant_id0.0.2.xsd +1076 -0
  41. data/lib/ojxv/schemas/crossref/grant_id0.1.0.xsd +1077 -0
  42. data/lib/ojxv/schemas/crossref/module-ali.xsd +47 -0
  43. data/lib/ojxv/schemas/crossref/oai-identifier.xsd +47 -0
  44. data/lib/ojxv/schemas/crossref/openAI.xsd +24 -0
  45. data/lib/ojxv/schemas/crossref/relations.xsd +426 -0
  46. data/lib/ojxv/schemas/crossref/rfc1807.xsd +53 -0
  47. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-common.xsd +101 -0
  48. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-content.xsd +683 -0
  49. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-presentation.xsd +2092 -0
  50. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-strict-content.xsd +186 -0
  51. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3.xsd +9 -0
  52. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/module-ali.xsd +47 -0
  53. data/lib/ojxv/schemas/crossref/standard-modules/module-ali.xsd +47 -0
  54. data/lib/ojxv/schemas/crossref/standard-modules/xlink.xsd +100 -0
  55. data/lib/ojxv/schemas/crossref/standard-modules/xml.xsd +287 -0
  56. data/lib/ojxv/schemas/crossref/unixref1.0.xsd +2433 -0
  57. data/lib/ojxv/schemas/crossref/unixref1.1.xsd +3240 -0
  58. data/lib/ojxv/schemas/crossref/xml.xsd +287 -0
  59. data/lib/ojxv/schemas/jats/1.0/JATS-XHTMLtablesetup1.ent +342 -0
  60. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-article1.dtd +734 -0
  61. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-custom-classes1.ent +271 -0
  62. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-custom-modules1.ent +221 -0
  63. data/lib/ojxv/schemas/jats/1.0/JATS-archivearticle1.dtd +695 -0
  64. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-classes1.ent +242 -0
  65. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-mixes1.ent +357 -0
  66. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-models1.ent +1119 -0
  67. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-modules1.ent +216 -0
  68. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-classes1.ent +306 -0
  69. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-mixes1.ent +278 -0
  70. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-models1.ent +1032 -0
  71. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-modules1.ent +200 -0
  72. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthoring1.dtd +519 -0
  73. data/lib/ojxv/schemas/jats/1.0/JATS-articlemeta1.ent +1663 -0
  74. data/lib/ojxv/schemas/jats/1.0/JATS-backmatter1.ent +318 -0
  75. data/lib/ojxv/schemas/jats/1.0/JATS-chars1.ent +455 -0
  76. data/lib/ojxv/schemas/jats/1.0/JATS-common1.ent +3622 -0
  77. data/lib/ojxv/schemas/jats/1.0/JATS-default-classes1.ent +1049 -0
  78. data/lib/ojxv/schemas/jats/1.0/JATS-default-mixes1.ent +390 -0
  79. data/lib/ojxv/schemas/jats/1.0/JATS-display1.ent +837 -0
  80. data/lib/ojxv/schemas/jats/1.0/JATS-format1.ent +551 -0
  81. data/lib/ojxv/schemas/jats/1.0/JATS-funding1.ent +467 -0
  82. data/lib/ojxv/schemas/jats/1.0/JATS-journalmeta1.ent +371 -0
  83. data/lib/ojxv/schemas/jats/1.0/JATS-journalpub-oasis-custom-classes1.ent +291 -0
  84. data/lib/ojxv/schemas/jats/1.0/JATS-journalpub-oasis-custom-modules1.ent +222 -0
  85. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-classes1.ent +258 -0
  86. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-mixes1.ent +195 -0
  87. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-models1.ent +752 -0
  88. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-modules1.ent +201 -0
  89. data/lib/ojxv/schemas/jats/1.0/JATS-journalpublishing-oasis-article1.dtd +718 -0
  90. data/lib/ojxv/schemas/jats/1.0/JATS-journalpublishing1.dtd +691 -0
  91. data/lib/ojxv/schemas/jats/1.0/JATS-link1.ent +344 -0
  92. data/lib/ojxv/schemas/jats/1.0/JATS-list1.ent +403 -0
  93. data/lib/ojxv/schemas/jats/1.0/JATS-math1.ent +318 -0
  94. data/lib/ojxv/schemas/jats/1.0/JATS-mathmlsetup1.ent +281 -0
  95. data/lib/ojxv/schemas/jats/1.0/JATS-modules1.ent +481 -0
  96. data/lib/ojxv/schemas/jats/1.0/JATS-nlmcitation1.ent +215 -0
  97. data/lib/ojxv/schemas/jats/1.0/JATS-notat1.ent +208 -0
  98. data/lib/ojxv/schemas/jats/1.0/JATS-oasis-namespace1.ent +181 -0
  99. data/lib/ojxv/schemas/jats/1.0/JATS-oasis-tablesetup1.ent +295 -0
  100. data/lib/ojxv/schemas/jats/1.0/JATS-para1.ent +395 -0
  101. data/lib/ojxv/schemas/jats/1.0/JATS-phrase1.ent +431 -0
  102. data/lib/ojxv/schemas/jats/1.0/JATS-publishing1.dtd +691 -0
  103. data/lib/ojxv/schemas/jats/1.0/JATS-references1.ent +1001 -0
  104. data/lib/ojxv/schemas/jats/1.0/JATS-related-object1.ent +214 -0
  105. data/lib/ojxv/schemas/jats/1.0/JATS-section1.ent +238 -0
  106. data/lib/ojxv/schemas/jats/1.0/JATS-xmlspecchars1.ent +343 -0
  107. data/lib/ojxv/schemas/jats/1.0/iso8879/isobox.ent +61 -0
  108. data/lib/ojxv/schemas/jats/1.0/iso8879/isocyr1.ent +88 -0
  109. data/lib/ojxv/schemas/jats/1.0/iso8879/isocyr2.ent +47 -0
  110. data/lib/ojxv/schemas/jats/1.0/iso8879/isodia.ent +35 -0
  111. data/lib/ojxv/schemas/jats/1.0/iso8879/isolat1.ent +83 -0
  112. data/lib/ojxv/schemas/jats/1.0/iso8879/isolat2.ent +142 -0
  113. data/lib/ojxv/schemas/jats/1.0/iso8879/isonum.ent +97 -0
  114. data/lib/ojxv/schemas/jats/1.0/iso8879/isopub.ent +105 -0
  115. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsa.ent +167 -0
  116. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsb.ent +143 -0
  117. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsc.ent +43 -0
  118. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsn.ent +114 -0
  119. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamso.ent +73 -0
  120. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsr.ent +204 -0
  121. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isogrk3.ent +64 -0
  122. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomfrk.ent +75 -0
  123. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomopf.ent +49 -0
  124. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomscr.ent +75 -0
  125. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isotech.ent +182 -0
  126. data/lib/ojxv/schemas/jats/1.0/mathml/mmlalias.ent +564 -0
  127. data/lib/ojxv/schemas/jats/1.0/mathml/mmlextra.ent +122 -0
  128. data/lib/ojxv/schemas/jats/1.0/mathml2-qname-1.mod +286 -0
  129. data/lib/ojxv/schemas/jats/1.0/mathml2.dtd +2206 -0
  130. data/lib/ojxv/schemas/jats/1.0/oasis-exchange.ent +399 -0
  131. data/lib/ojxv/schemas/jats/1.0/xhtml-inlstyle-1.mod +34 -0
  132. data/lib/ojxv/schemas/jats/1.0/xhtml-table-1.mod +333 -0
  133. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk1.ent +70 -0
  134. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk2.ent +41 -0
  135. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk4.ent +66 -0
  136. data/lib/ojxv/schemas/jats/1.1/JATS-XHTMLtablesetup1.ent +501 -0
  137. data/lib/ojxv/schemas/jats/1.1/JATS-ali-namespace1.ent +154 -0
  138. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-article1-mathml3.dtd +911 -0
  139. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-article1.dtd +894 -0
  140. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-custom-classes1.ent +326 -0
  141. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-custom-modules1.ent +269 -0
  142. data/lib/ojxv/schemas/jats/1.1/JATS-archivearticle1-mathml3.dtd +867 -0
  143. data/lib/ojxv/schemas/jats/1.1/JATS-archivearticle1.dtd +854 -0
  144. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-classes1.ent +291 -0
  145. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-mixes1.ent +420 -0
  146. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-models1.ent +1339 -0
  147. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-modules1.ent +266 -0
  148. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-classes1.ent +384 -0
  149. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-mixes1.ent +321 -0
  150. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-models1.ent +1269 -0
  151. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-modules1.ent +249 -0
  152. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthoring1-mathml3.dtd +669 -0
  153. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthoring1.dtd +655 -0
  154. data/lib/ojxv/schemas/jats/1.1/JATS-articlemeta1.ent +1817 -0
  155. data/lib/ojxv/schemas/jats/1.1/JATS-backmatter1.ent +393 -0
  156. data/lib/ojxv/schemas/jats/1.1/JATS-chars1.ent +525 -0
  157. data/lib/ojxv/schemas/jats/1.1/JATS-common-atts1.ent +221 -0
  158. data/lib/ojxv/schemas/jats/1.1/JATS-common1.ent +4273 -0
  159. data/lib/ojxv/schemas/jats/1.1/JATS-default-classes1.ent +1277 -0
  160. data/lib/ojxv/schemas/jats/1.1/JATS-default-mixes1.ent +455 -0
  161. data/lib/ojxv/schemas/jats/1.1/JATS-display1.ent +1000 -0
  162. data/lib/ojxv/schemas/jats/1.1/JATS-format1.ent +858 -0
  163. data/lib/ojxv/schemas/jats/1.1/JATS-funding1.ent +547 -0
  164. data/lib/ojxv/schemas/jats/1.1/JATS-journalmeta1.ent +454 -0
  165. data/lib/ojxv/schemas/jats/1.1/JATS-journalpub-oasis-custom-classes1.ent +378 -0
  166. data/lib/ojxv/schemas/jats/1.1/JATS-journalpub-oasis-custom-modules1.ent +270 -0
  167. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-classes1.ent +337 -0
  168. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-mixes1.ent +258 -0
  169. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-models1.ent +979 -0
  170. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-modules1.ent +261 -0
  171. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing-oasis-article1-mathml3.dtd +889 -0
  172. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing-oasis-article1.dtd +872 -0
  173. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing1-mathml3.dtd +861 -0
  174. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing1.dtd +845 -0
  175. data/lib/ojxv/schemas/jats/1.1/JATS-link1.ent +416 -0
  176. data/lib/ojxv/schemas/jats/1.1/JATS-list1.ent +494 -0
  177. data/lib/ojxv/schemas/jats/1.1/JATS-math1.ent +402 -0
  178. data/lib/ojxv/schemas/jats/1.1/JATS-mathml3-mathmlsetup1.ent +350 -0
  179. data/lib/ojxv/schemas/jats/1.1/JATS-mathml3-modules1.ent +190 -0
  180. data/lib/ojxv/schemas/jats/1.1/JATS-mathmlsetup1.ent +348 -0
  181. data/lib/ojxv/schemas/jats/1.1/JATS-modules1.ent +584 -0
  182. data/lib/ojxv/schemas/jats/1.1/JATS-nlmcitation1.ent +285 -0
  183. data/lib/ojxv/schemas/jats/1.1/JATS-notat1.ent +269 -0
  184. data/lib/ojxv/schemas/jats/1.1/JATS-oasis-namespace1.ent +223 -0
  185. data/lib/ojxv/schemas/jats/1.1/JATS-oasis-tablesetup1.ent +409 -0
  186. data/lib/ojxv/schemas/jats/1.1/JATS-para1.ent +481 -0
  187. data/lib/ojxv/schemas/jats/1.1/JATS-phrase1.ent +502 -0
  188. data/lib/ojxv/schemas/jats/1.1/JATS-publishing1.dtd +845 -0
  189. data/lib/ojxv/schemas/jats/1.1/JATS-references1.ent +1205 -0
  190. data/lib/ojxv/schemas/jats/1.1/JATS-related-object1.ent +283 -0
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  192. data/lib/ojxv/schemas/jats/1.1/JATS-xmlspecchars1.ent +389 -0
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  194. data/lib/ojxv/schemas/jats/1.1/iso8879/isocyr1.ent +88 -0
  195. data/lib/ojxv/schemas/jats/1.1/iso8879/isocyr2.ent +47 -0
  196. data/lib/ojxv/schemas/jats/1.1/iso8879/isodia.ent +35 -0
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  210. data/lib/ojxv/schemas/jats/1.1/iso9573-13/isomscr.ent +75 -0
  211. data/lib/ojxv/schemas/jats/1.1/iso9573-13/isotech.ent +182 -0
  212. data/lib/ojxv/schemas/jats/1.1/mathml/mmlalias.ent +564 -0
  213. data/lib/ojxv/schemas/jats/1.1/mathml/mmlextra.ent +122 -0
  214. data/lib/ojxv/schemas/jats/1.1/mathml2-qname-1.mod +286 -0
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  216. data/lib/ojxv/schemas/jats/1.1/mathml3-qname1.mod +294 -0
  217. data/lib/ojxv/schemas/jats/1.1/mathml3.dtd +1682 -0
  218. data/lib/ojxv/schemas/jats/1.1/oasis-exchange.ent +449 -0
  219. data/lib/ojxv/schemas/jats/1.1/xhtml-inlstyle-1.mod +34 -0
  220. data/lib/ojxv/schemas/jats/1.1/xhtml-table-1.mod +333 -0
  221. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk1.ent +70 -0
  222. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk2.ent +41 -0
  223. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk4.ent +66 -0
  224. data/lib/ojxv/schemas/jats/1.1d1/JATS-XHTMLtablesetup1.ent +421 -0
  225. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-article1-mathml3.dtd +829 -0
  226. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-article1.dtd +813 -0
  227. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-custom-classes1.ent +277 -0
  228. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-custom-modules1.ent +221 -0
  229. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivearticle1-mathml3.dtd +791 -0
  230. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivearticle1.dtd +775 -0
  231. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivecustom-classes1.ent +242 -0
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@@ -0,0 +1,577 @@
1
+ <?xml version="1.0"?>
2
+ <!-- ========================================================================== -->
3
+ <!-- XSL Name : NLM2CrossRef.xsl (version 1.0) -->
4
+ <!-- Created By : Aptara, Technology Group -->
5
+ <!-- Purpose : To extract metadata for CrossRef from NLM's coded XML -->
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+ <!-- Creation Date : May 16, 2007 -->
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+ <!-- Last Modification: May 26, 2007 -->
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+ <!-- Command Line : java -jar saxon8.jar input.xml NLM2CrossRef.xsl -->
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+ <!-- meta=input_meta.xml >output.xml -->
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+ <!-- Remarks : -->
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+ <!-- ========================================================================== -->
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+ <!-- updated schema version to 4.3.0 2/18/11 PDF -->
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+
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+ <xsl:stylesheet version="2.0"
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+ xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
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+ xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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+ xmlns:xs="http://www.w3.org/2001/XMLSchema"
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+ xmlns="http://www.crossref.org/schema/4.3.0"
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+ xmlns:xsldoc="http://www.bacman.net/XSLdoc"
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+ exclude-result-prefixes="xsldoc">
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+
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+ <xsl:output method="xml"
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+ indent="yes"
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+ encoding="UTF-8"/>
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+
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+ <xsl:param name="meta" as="xs:string" required="yes"/>
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+ <xsl:variable name="metafile" select="document($meta)"/>
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+ <xsl:variable name="date" select="adjust-date-to-timezone(current-date(), ())"/>
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+ <xsl:variable name="time" select="adjust-time-to-timezone(current-time(), ())"/>
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+ <xsl:variable name="tempdatetime" select="concat($date,'',$time)"/>
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+ <xsl:variable name="datetime" select="translate($tempdatetime,':-.','')"/>
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+
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+ <!-- ========================================================================== -->
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+ <!-- Root Element -->
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+ <!-- ========================================================================== -->
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+ <xsl:template match="/">
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+ <xsl:choose>
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+ <xsl:when test="article">
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+ <doi_batch version="4.3.0">
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+ <xsl:attribute name="xsi:schemaLocation">../DTDs/crossref/crossref4.3.0.xsd</xsl:attribute>
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+ <head>
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+ <xsl:apply-templates select="//front"/>
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+
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+ </head>
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+ <body>
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+ <journal>
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+ <xsl:apply-templates select="//journal-meta"/>
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+ <xsl:if test="//pub-date|//article-meta/volume|//article-meta/issue">
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+ <journal_issue>
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+ <xsl:apply-templates select="//pub-date"/>
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+ <xsl:apply-templates select="//article-meta/volume"/>
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+ <xsl:apply-templates select="//article-meta/issue"/>
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+ </journal_issue>
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+ </xsl:if>
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+ <xsl:apply-templates select="//article-meta/title-group"/>
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+ </journal>
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+ </body>
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+ </doi_batch>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <xsl:message terminate="yes"/>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ </xsl:template>
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+
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+ <!-- ========================================================================== -->
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+ <!-- Front Matter Element -->
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+ <!-- ========================================================================== -->
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+ <xsl:template match="front">
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+ <doi_batch_id>
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+ <xsl:choose>
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+ <xsl:when test="$metafile/meta/article_id">
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+ <xsl:apply-templates select="$metafile/meta/article_id"/>
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+ </xsl:when>
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+ <xsl:when test="article-meta/article-id[@pub-id-type='art-access-id']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='art-access-id']"/>
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+ </xsl:when>
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+ <xsl:when test="article-meta/article-id[@pub-id-type='publisher-id']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='publisher-id']"/>
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+ </xsl:when>
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+ <xsl:when test="article-meta/article-id[@pub-id-type='doi']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='doi']"/>
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+ </xsl:when>
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+ <xsl:when test="article-meta/article-id[@pub-id-type='medline']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='medline']"/>
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+ </xsl:when>
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+ <xsl:when test="article-meta/article-id[@pub-id-type='pii']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='pii']"/>
89
+ </xsl:when>
90
+ <xsl:when test="article-meta/article-id[@pub-id-type='sici']">
91
+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='sici']"/>
92
+ </xsl:when>
93
+ <xsl:when test="article-meta/article-id[@pub-id-type='pmid']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='pmid']"/>
95
+ </xsl:when>
96
+ <xsl:when test="article-meta/article-id[@pub-id-type='other']">
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+ <xsl:apply-templates select="article-meta/article-id[@pub-id-type='other']"/>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <xsl:comment>No article-id has been entered by user</xsl:comment>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ </doi_batch_id>
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+ <timestamp>
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+ <xsl:value-of select="$datetime"/>
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+ </timestamp>
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+ <depositor>
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+ <name>
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+ <xsl:choose>
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+ <xsl:when test="$metafile/meta/depositor">
111
+ <xsl:apply-templates select="$metafile/meta/depositor"/>
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+ </xsl:when>
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+ <xsl:when test="//journal-meta/publisher">
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+ <xsl:apply-templates select="//journal-meta/publisher/publisher-name"/>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <xsl:comment>Publisher's Name not found in the input file</xsl:comment>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ </name>
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+ <email_address>
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+ <xsl:choose>
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+ <xsl:when test="$metafile/meta/email_address">
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+ <xsl:apply-templates select="$metafile/meta/email_address"/>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <xsl:comment>NO e-mail address has been entered by the user</xsl:comment>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ </email_address>
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+ </depositor>
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+ <registrant>
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+ <xsl:choose>
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+ <xsl:when test="$metafile/meta/depositor">
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+ <xsl:apply-templates select="$metafile/meta/depositor"/>
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+ </xsl:when>
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+ <xsl:when test="//journal-meta/publisher">
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+ <xsl:apply-templates select="//journal-meta/publisher/publisher-name"/>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <xsl:comment>Publisher's name not found in the input file</xsl:comment>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ </registrant>
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+ </xsl:template>
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+
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+ <!-- ========================================================================== -->
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+ <!-- Journal Metadata Element -->
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+ <!-- ========================================================================== -->
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+ <xsl:template match="journal-meta">
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+ <journal_metadata language="en">
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+ <xsl:choose>
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+ <xsl:when test="journal-title">
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+ <full_title>
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+ <xsl:value-of select="journal-title"/>
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+ </full_title>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <full_title>
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+ <xsl:message terminate="yes">Journal full title is not available in the Input file</xsl:message>
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+ </full_title>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ <xsl:choose>
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+ <xsl:when test="abbrev-journal-title">
166
+ <abbrev_title>
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+ <xsl:value-of select="abbrev-journal-title"/>
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+ </abbrev_title>
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+ </xsl:when>
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+ </xsl:choose>
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+ <xsl:choose>
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+ <xsl:when test="issn">
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+ <xsl:apply-templates select="issn"/>
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+ </xsl:when>
175
+ <xsl:otherwise>
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+ <xsl:message terminate="yes">ISSN is not available in the Input file</xsl:message>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ <xsl:if test="../article-meta/article-id[@pub-id-type='coden']">
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+ <coden>
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+ <xsl:value-of select="../article-meta/article-id[@pub-id-type='coden']"/>
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+ </coden>
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+ </xsl:if>
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+ </journal_metadata>
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+ </xsl:template>
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+
187
+ <!-- ========================================================================== -->
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+ <!-- ISSN -->
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+ <!-- ========================================================================== -->
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+ <xsl:template match="issn">
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+ <xsl:if test="@pub-type='ppub'">
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+ <issn media_type="print">
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+ <xsl:apply-templates/>
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+ </issn>
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+ </xsl:if>
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+ <xsl:if test="@pub-type='epub'">
197
+ <issn media_type="electronic">
198
+ <xsl:apply-templates/>
199
+ </issn>
200
+ </xsl:if>
201
+ <xsl:if test="not(@pub-type)">
202
+ <issn media_type="print">
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+ <xsl:apply-templates/>
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+ </issn>
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+ </xsl:if>
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+ </xsl:template>
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+
208
+ <!-- ========================================================================== -->
209
+ <!-- Publication Date -->
210
+ <!-- ========================================================================== -->
211
+ <xsl:template match="pub-date">
212
+ <xsl:if test="@pub-type='ppub'">
213
+ <publication_date media_type="print">
214
+ <xsl:if test="month">
215
+ <month>
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+ <xsl:apply-templates select="month"/>
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+ </month>
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+ </xsl:if>
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+ <xsl:if test="day">
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+ <day>
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+ <xsl:apply-templates select="day"/>
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+ </day>
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+ </xsl:if>
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+ <year>
225
+ <xsl:apply-templates select="year"/>
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+ </year>
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+ </publication_date>
228
+ </xsl:if>
229
+ <xsl:if test="@pub-type='epub'">
230
+ <publication_date media_type="online">
231
+ <xsl:if test="month">
232
+ <month>
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+ <xsl:apply-templates select="month"/>
234
+ </month>
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+ </xsl:if>
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+ <xsl:if test="day">
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+ <day>
238
+ <xsl:apply-templates select="day"/>
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+ </day>
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+ </xsl:if>
241
+ <year>
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+ <xsl:apply-templates select="year"/>
243
+ </year>
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+ </publication_date>
245
+ </xsl:if>
246
+ <xsl:if test="not(@pub-type)">
247
+ <publication_date media_type="print">
248
+ <xsl:if test="month">
249
+ <month>
250
+ <xsl:apply-templates select="month"/>
251
+ </month>
252
+ </xsl:if>
253
+ <xsl:if test="day">
254
+ <day>
255
+ <xsl:apply-templates select="day"/>
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+ </day>
257
+ </xsl:if>
258
+ <year>
259
+ <xsl:apply-templates select="year"/>
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+ </year>
261
+ </publication_date>
262
+ </xsl:if>
263
+ </xsl:template>
264
+
265
+ <!-- ========================================================================== -->
266
+ <!-- Volume/Issue -->
267
+ <!-- ========================================================================== -->
268
+ <xsl:template match="//article-meta/volume">
269
+ <journal_volume>
270
+ <volume>
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+ <xsl:apply-templates/>
272
+ </volume>
273
+ </journal_volume>
274
+ </xsl:template>
275
+
276
+ <xsl:template match="//article-meta/issue">
277
+ <issue>
278
+ <xsl:apply-templates/>
279
+ </issue>
280
+ </xsl:template>
281
+
282
+ <!-- ========================================================================== -->
283
+ <!-- Title Group -->
284
+ <!-- ========================================================================== -->
285
+ <xsl:template match="//article-meta/title-group">
286
+ <journal_article publication_type="full_text">
287
+ <titles>
288
+ <title>
289
+ <xsl:apply-templates select="article-title"/>
290
+ </title>
291
+ </titles>
292
+ <xsl:if test="//article-meta/contrib-group">
293
+ <xsl:apply-templates select="../contrib-group"/>
294
+ </xsl:if>
295
+ <xsl:apply-templates select="//pub-date"/>
296
+ <xsl:if test="//article-meta/fpage|//article-meta/lpage">
297
+ <xsl:apply-templates select="//article-meta/fpage|//article-meta/lpage"/>
298
+ </xsl:if>
299
+ <xsl:if test="//article-id[@pub-id-type='doi']|//article-id[@pub-id-type='pii']|//article-id[@pub-id-type='sici']">
300
+ <xsl:call-template name="publisher-item"/>
301
+ </xsl:if>
302
+ <doi_data>
303
+ <doi>
304
+ <xsl:choose>
305
+ <xsl:when test="$metafile/meta/doi">
306
+ <xsl:apply-templates select="$metafile/meta/doi"/>
307
+ </xsl:when>
308
+ <xsl:when test="//article-meta/article-id[@pub-id-type='doi']">
309
+ <xsl:apply-templates select="//article-meta/article-id[@pub-id-type='doi']"/>
310
+ </xsl:when>
311
+ <xsl:otherwise>
312
+ <xsl:message terminate="yes">DOI entry is not available in the Input/Meta file(s)</xsl:message>
313
+ </xsl:otherwise>
314
+ </xsl:choose>
315
+ </doi>
316
+ <timestamp>
317
+ <xsl:value-of select="$datetime"/>
318
+ </timestamp>
319
+ <resource>
320
+ <xsl:choose>
321
+ <xsl:when test="$metafile/meta/resource">
322
+ <xsl:apply-templates select="$metafile/meta/resource"/>
323
+ </xsl:when>
324
+ <xsl:otherwise>
325
+ <xsl:comment>No Resource entry has been entered by the user</xsl:comment>
326
+ </xsl:otherwise>
327
+ </xsl:choose>
328
+ </resource>
329
+ </doi_data>
330
+ <xsl:apply-templates select="//back/ref-list"/>
331
+ </journal_article>
332
+ </xsl:template>
333
+
334
+ <!-- ========================================================================== -->
335
+ <!-- Article Contributors -->
336
+ <!-- ========================================================================== -->
337
+ <xsl:template match="//article-meta/contrib-group">
338
+ <contributors>
339
+ <xsl:apply-templates select="contrib"/>
340
+ </contributors>
341
+ </xsl:template>
342
+
343
+ <xsl:template match="contrib">
344
+ <xsl:if test="position()=1">
345
+ <person_name sequence="first" contributor_role="author">
346
+ <xsl:apply-templates select="name"/>
347
+ <xsl:if test="xref[@ref-type='aff' and @rid]">
348
+ <xsl:call-template name="multi-ref">
349
+ <xsl:with-param name="tokens" select="xref[@ref-type='aff']/@rid"/>
350
+ </xsl:call-template>
351
+ </xsl:if>
352
+ </person_name>
353
+ </xsl:if>
354
+ <xsl:if test="position()&gt;1">
355
+ <person_name sequence="additional" contributor_role="author">
356
+ <xsl:apply-templates select="name"/>
357
+ <xsl:if test="xref[@ref-type='aff' and @rid]">
358
+ <xsl:call-template name="multi-ref">
359
+ <xsl:with-param name="tokens" select="xref[@ref-type='aff']/@rid"/>
360
+ </xsl:call-template>
361
+ </xsl:if>
362
+ </person_name>
363
+ </xsl:if>
364
+ </xsl:template>
365
+
366
+ <xsl:template match="contrib-group/contrib/name">
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+ <xsl:if test="given-names">
368
+ <given_name>
369
+ <xsl:apply-templates select="given-names"/>
370
+ </given_name>
371
+ </xsl:if>
372
+ <surname>
373
+ <xsl:apply-templates select="surname"/>
374
+ </surname>
375
+ <xsl:if test="suffix">
376
+ <suffix>
377
+ <xsl:apply-templates select="suffix"/>
378
+ </suffix>
379
+ </xsl:if>
380
+ </xsl:template>
381
+
382
+ <xsl:template name="multi-ref">
383
+ <xsl:param name="tokens"/>
384
+ <xsl:if test="$tokens">
385
+ <xsl:choose>
386
+ <xsl:when test="contains($tokens,' ')">
387
+ <xsl:call-template name="one-ref">
388
+ <xsl:with-param name="token" select="substring-before($tokens,' ')"/>
389
+ </xsl:call-template>
390
+ <xsl:call-template name="multi-ref">
391
+ <xsl:with-param name="tokens" select="substring-after($tokens,' ')"/>
392
+ </xsl:call-template>
393
+ </xsl:when>
394
+ <xsl:otherwise>
395
+ <xsl:call-template name="one-ref">
396
+ <xsl:with-param name="token" select="$tokens"/>
397
+ </xsl:call-template>
398
+ </xsl:otherwise>
399
+ </xsl:choose>
400
+ </xsl:if>
401
+ </xsl:template>
402
+
403
+ <xsl:template name="one-ref">
404
+ <xsl:param name="token"/>
405
+ <affiliation>
406
+ <xsl:value-of select="//aff[@id=$token]"/>
407
+ </affiliation>
408
+ </xsl:template>
409
+
410
+ <xsl:template match="aff">
411
+ </xsl:template>
412
+
413
+ <xsl:template match="aff/label">
414
+ </xsl:template>
415
+
416
+ <!-- ========================================================================== -->
417
+ <!-- Article Page Information -->
418
+ <!-- ========================================================================== -->
419
+ <xsl:template match="article-meta/fpage">
420
+ <pages>
421
+ <first_page>
422
+ <xsl:apply-templates/>
423
+ </first_page>
424
+ <xsl:if test="../lpage">
425
+ <last_page>
426
+ <xsl:value-of select="../lpage"/>
427
+ </last_page>
428
+ </xsl:if>
429
+ </pages>
430
+ </xsl:template>
431
+
432
+ <xsl:template match="lpage">
433
+ </xsl:template>
434
+
435
+ <!-- ========================================================================== -->
436
+ <!-- Publication Identifier -->
437
+ <!-- ========================================================================== -->
438
+ <xsl:template name="publisher-item">
439
+ <publisher_item>
440
+ <xsl:if test="//article-id[@pub-id-type='doi']">
441
+ <identifier id_type="doi">
442
+ <xsl:value-of select="//article-id[@pub-id-type='doi']"/>
443
+ </identifier>
444
+ </xsl:if>
445
+ <xsl:if test="//article-id[@pub-id-type='pii']">
446
+ <identifier id_type="pii">
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+ <xsl:value-of select="//article-id[@pub-id-type='pii']"/>
448
+ </identifier>
449
+ </xsl:if>
450
+ <xsl:if test="//article-id[@pub-id-type='sici']">
451
+ <identifier id_type="sici">
452
+ <xsl:value-of select="//article-id[@pub-id-type='sici']"/>
453
+ </identifier>
454
+ </xsl:if>
455
+ </publisher_item>
456
+ </xsl:template>
457
+
458
+ <!-- ========================================================================== -->
459
+ <!-- Citations -->
460
+ <!-- ========================================================================== -->
461
+ <xsl:template match="ref-list">
462
+ <citation_list>
463
+ <xsl:apply-templates select="ref"/>
464
+ </citation_list>
465
+ </xsl:template>
466
+
467
+ <xsl:template match="ref">
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+ <xsl:variable name="key" select="concat($datetime,'_',@id)"/>
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+ <citation>
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+ <xsl:attribute name="key">key<xsl:value-of select="$key"/></xsl:attribute>
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+ <xsl:apply-templates select="citation|nlm-citation"/>
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+ </citation>
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+ </xsl:template>
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+
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+ <xsl:template match="citation|nlm-citation">
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+ <xsl:choose>
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+ <xsl:when test="@citation-type='journal'">
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+ <xsl:if test="issn">
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+ <issn>
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+ <xsl:apply-templates select="issn"/>
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+ </issn>
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+ </xsl:if>
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+ <xsl:if test="source">
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+ <journal_title>
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+ <xsl:apply-templates select="source"/>
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+ </journal_title>
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+ </xsl:if>
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+ <xsl:if test="collab">
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+ <xsl:apply-templates select="collab"/>
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+ </xsl:if>
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+ <xsl:if test="person-group">
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+ <xsl:apply-templates select="person-group/name|person-group/collab"/>
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+ </xsl:if>
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+ <xsl:if test="volume">
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+ <volume>
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+ <xsl:apply-templates select="volume"/>
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+ </volume>
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+ </xsl:if>
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+ <xsl:if test="issue">
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+ <issue>
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+ <xsl:apply-templates select="issue"/>
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+ </issue>
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+ </xsl:if>
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+ <xsl:if test="fpage">
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+ <first_page>
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+ <xsl:apply-templates select="fpage"/>
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+ </first_page>
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+ </xsl:if>
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+ <xsl:if test="year">
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+ <cYear>
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+ <xsl:value-of select="replace(year, '[a-zA-Z]', '')" />
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+ </cYear>
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+ </xsl:if>
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+ <xsl:if test="article-title">
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+ <article_title>
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+ <xsl:apply-templates select="article-title"/>
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+ </article_title>
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+ </xsl:if>
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+ </xsl:when>
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+ <xsl:when test="@citation-type='book' or @citation-type='conf-proceedings' or @citation-type='confproc'">
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+ <xsl:if test="source">
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+ <volume_title>
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+ <xsl:apply-templates select="source"/>
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+ </volume_title>
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+ </xsl:if>
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+ <xsl:if test="collab">
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+ <xsl:apply-templates select="collab"/>
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+ </xsl:if>
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+ <xsl:if test="person-group">
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+ <xsl:apply-templates select="person-group/name|person-group/collab"/>
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+ </xsl:if>
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+ <xsl:if test="edition">
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+ <edition_number>
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+ <xsl:apply-templates select="edition"/>
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+ </edition_number>
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+ </xsl:if>
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+ <xsl:if test="fpage">
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+ <first_page>
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+ <xsl:apply-templates select="fpage"/>
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+ </first_page>
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+ </xsl:if>
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+ <xsl:if test="year">
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+ <cYear>
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+ <xsl:value-of select="replace(year, '[a-zA-Z]', '')" />
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+ </cYear>
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+ </xsl:if>
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+ <xsl:if test="article-title">
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+ <article_title>
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+ <xsl:apply-templates select="article-title"/>
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+ </article_title>
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+ </xsl:if>
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+ </xsl:when>
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+ <xsl:otherwise>
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+ <unstructured_citation>
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+ <xsl:value-of select="."/>
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+ </unstructured_citation>
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+ </xsl:otherwise>
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+ </xsl:choose>
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+ </xsl:template>
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+
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+ <xsl:template match="back//name">
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+ <xsl:if test="position()=1">
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+ <author>
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+ <xsl:apply-templates select="surname"/>
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+ </author>
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+ </xsl:if>
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+ </xsl:template>
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+
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+ <xsl:template match="back//collab">
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+ <xsl:if test="position()=1">
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+ <author>
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+ <xsl:apply-templates/>
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+ </author>
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+ </xsl:if>
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+ </xsl:template>
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+
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+ </xsl:stylesheet>