ojxv 0.0.2 → 1.0.0

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Files changed (913) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +77 -2
  3. data/lib/ojxv/crossref_metadata_file.rb +49 -0
  4. data/lib/ojxv/jats_file.rb +64 -0
  5. data/lib/ojxv/schemas/crossref/AccessIndicators.xsd +64 -0
  6. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-3d2-mathml3-elements.xsd +10130 -0
  7. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-3d2-mathml3.xsd +48 -0
  8. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-elements.xsd +8705 -0
  9. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-mathml3-elements.xsd +8608 -0
  10. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1-mathml3.xsd +49 -0
  11. data/lib/ojxv/schemas/crossref/JATS-journalpublishing1.xsd +6176 -0
  12. data/lib/ojxv/schemas/crossref/NLM.JATS2CrossRef.v1.0.xsl +554 -0
  13. data/lib/ojxv/schemas/crossref/NLM2CrossRef.xsl +577 -0
  14. data/lib/ojxv/schemas/crossref/OAI-PMH.cr.xsd +280 -0
  15. data/lib/ojxv/schemas/crossref/OAI-PMH.xsd +317 -0
  16. data/lib/ojxv/schemas/crossref/clinicaltrials.xsd +61 -0
  17. data/lib/ojxv/schemas/crossref/common4.8.0.xsd +1606 -0
  18. data/lib/ojxv/schemas/crossref/common4.8.1.xsd +1606 -0
  19. data/lib/ojxv/schemas/crossref/common5.1.0.xsd +1606 -0
  20. data/lib/ojxv/schemas/crossref/common5.2.0.xsd +1606 -0
  21. data/lib/ojxv/schemas/crossref/common5.3.0.xsd +1606 -0
  22. data/lib/ojxv/schemas/crossref/common5.3.1.xsd +1606 -0
  23. data/lib/ojxv/schemas/crossref/crossref4.8.0.xsd +2042 -0
  24. data/lib/ojxv/schemas/crossref/crossref4.8.1.xsd +2042 -0
  25. data/lib/ojxv/schemas/crossref/crossref5.1.0.xsd +2075 -0
  26. data/lib/ojxv/schemas/crossref/crossref5.2.0.xsd +2077 -0
  27. data/lib/ojxv/schemas/crossref/crossref5.3.0.xsd +2065 -0
  28. data/lib/ojxv/schemas/crossref/crossref5.3.1.xsd +2065 -0
  29. data/lib/ojxv/schemas/crossref/crossref_citations_1.0.0.xsd +48 -0
  30. data/lib/ojxv/schemas/crossref/crossref_output3.0.0.xsd +1124 -0
  31. data/lib/ojxv/schemas/crossref/crossref_output3.0.1.xsd +1949 -0
  32. data/lib/ojxv/schemas/crossref/crossref_query_input1.0.xsd +587 -0
  33. data/lib/ojxv/schemas/crossref/crossref_query_input2.0.xsd +845 -0
  34. data/lib/ojxv/schemas/crossref/crossref_query_output1.0.xsd +499 -0
  35. data/lib/ojxv/schemas/crossref/crossref_query_output2.0.xsd +1052 -0
  36. data/lib/ojxv/schemas/crossref/crossref_query_output3.0.xsd +1169 -0
  37. data/lib/ojxv/schemas/crossref/fundref.xsd +85 -0
  38. data/lib/ojxv/schemas/crossref/fundrefoutput.xsd +38 -0
  39. data/lib/ojxv/schemas/crossref/grant_id0.0.1.xsd +1076 -0
  40. data/lib/ojxv/schemas/crossref/grant_id0.0.2.xsd +1076 -0
  41. data/lib/ojxv/schemas/crossref/grant_id0.1.0.xsd +1077 -0
  42. data/lib/ojxv/schemas/crossref/module-ali.xsd +47 -0
  43. data/lib/ojxv/schemas/crossref/oai-identifier.xsd +47 -0
  44. data/lib/ojxv/schemas/crossref/openAI.xsd +24 -0
  45. data/lib/ojxv/schemas/crossref/relations.xsd +426 -0
  46. data/lib/ojxv/schemas/crossref/rfc1807.xsd +53 -0
  47. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-common.xsd +101 -0
  48. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-content.xsd +683 -0
  49. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-presentation.xsd +2092 -0
  50. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3-strict-content.xsd +186 -0
  51. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/mathml3.xsd +9 -0
  52. data/lib/ojxv/schemas/crossref/standard-modules/mathml3/module-ali.xsd +47 -0
  53. data/lib/ojxv/schemas/crossref/standard-modules/module-ali.xsd +47 -0
  54. data/lib/ojxv/schemas/crossref/standard-modules/xlink.xsd +100 -0
  55. data/lib/ojxv/schemas/crossref/standard-modules/xml.xsd +287 -0
  56. data/lib/ojxv/schemas/crossref/unixref1.0.xsd +2433 -0
  57. data/lib/ojxv/schemas/crossref/unixref1.1.xsd +3240 -0
  58. data/lib/ojxv/schemas/crossref/xml.xsd +287 -0
  59. data/lib/ojxv/schemas/jats/1.0/JATS-XHTMLtablesetup1.ent +342 -0
  60. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-article1.dtd +734 -0
  61. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-custom-classes1.ent +271 -0
  62. data/lib/ojxv/schemas/jats/1.0/JATS-archive-oasis-custom-modules1.ent +221 -0
  63. data/lib/ojxv/schemas/jats/1.0/JATS-archivearticle1.dtd +695 -0
  64. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-classes1.ent +242 -0
  65. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-mixes1.ent +357 -0
  66. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-models1.ent +1119 -0
  67. data/lib/ojxv/schemas/jats/1.0/JATS-archivecustom-modules1.ent +216 -0
  68. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-classes1.ent +306 -0
  69. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-mixes1.ent +278 -0
  70. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-models1.ent +1032 -0
  71. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthcustom-modules1.ent +200 -0
  72. data/lib/ojxv/schemas/jats/1.0/JATS-articleauthoring1.dtd +519 -0
  73. data/lib/ojxv/schemas/jats/1.0/JATS-articlemeta1.ent +1663 -0
  74. data/lib/ojxv/schemas/jats/1.0/JATS-backmatter1.ent +318 -0
  75. data/lib/ojxv/schemas/jats/1.0/JATS-chars1.ent +455 -0
  76. data/lib/ojxv/schemas/jats/1.0/JATS-common1.ent +3622 -0
  77. data/lib/ojxv/schemas/jats/1.0/JATS-default-classes1.ent +1049 -0
  78. data/lib/ojxv/schemas/jats/1.0/JATS-default-mixes1.ent +390 -0
  79. data/lib/ojxv/schemas/jats/1.0/JATS-display1.ent +837 -0
  80. data/lib/ojxv/schemas/jats/1.0/JATS-format1.ent +551 -0
  81. data/lib/ojxv/schemas/jats/1.0/JATS-funding1.ent +467 -0
  82. data/lib/ojxv/schemas/jats/1.0/JATS-journalmeta1.ent +371 -0
  83. data/lib/ojxv/schemas/jats/1.0/JATS-journalpub-oasis-custom-classes1.ent +291 -0
  84. data/lib/ojxv/schemas/jats/1.0/JATS-journalpub-oasis-custom-modules1.ent +222 -0
  85. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-classes1.ent +258 -0
  86. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-mixes1.ent +195 -0
  87. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-models1.ent +752 -0
  88. data/lib/ojxv/schemas/jats/1.0/JATS-journalpubcustom-modules1.ent +201 -0
  89. data/lib/ojxv/schemas/jats/1.0/JATS-journalpublishing-oasis-article1.dtd +718 -0
  90. data/lib/ojxv/schemas/jats/1.0/JATS-journalpublishing1.dtd +691 -0
  91. data/lib/ojxv/schemas/jats/1.0/JATS-link1.ent +344 -0
  92. data/lib/ojxv/schemas/jats/1.0/JATS-list1.ent +403 -0
  93. data/lib/ojxv/schemas/jats/1.0/JATS-math1.ent +318 -0
  94. data/lib/ojxv/schemas/jats/1.0/JATS-mathmlsetup1.ent +281 -0
  95. data/lib/ojxv/schemas/jats/1.0/JATS-modules1.ent +481 -0
  96. data/lib/ojxv/schemas/jats/1.0/JATS-nlmcitation1.ent +215 -0
  97. data/lib/ojxv/schemas/jats/1.0/JATS-notat1.ent +208 -0
  98. data/lib/ojxv/schemas/jats/1.0/JATS-oasis-namespace1.ent +181 -0
  99. data/lib/ojxv/schemas/jats/1.0/JATS-oasis-tablesetup1.ent +295 -0
  100. data/lib/ojxv/schemas/jats/1.0/JATS-para1.ent +395 -0
  101. data/lib/ojxv/schemas/jats/1.0/JATS-phrase1.ent +431 -0
  102. data/lib/ojxv/schemas/jats/1.0/JATS-publishing1.dtd +691 -0
  103. data/lib/ojxv/schemas/jats/1.0/JATS-references1.ent +1001 -0
  104. data/lib/ojxv/schemas/jats/1.0/JATS-related-object1.ent +214 -0
  105. data/lib/ojxv/schemas/jats/1.0/JATS-section1.ent +238 -0
  106. data/lib/ojxv/schemas/jats/1.0/JATS-xmlspecchars1.ent +343 -0
  107. data/lib/ojxv/schemas/jats/1.0/iso8879/isobox.ent +61 -0
  108. data/lib/ojxv/schemas/jats/1.0/iso8879/isocyr1.ent +88 -0
  109. data/lib/ojxv/schemas/jats/1.0/iso8879/isocyr2.ent +47 -0
  110. data/lib/ojxv/schemas/jats/1.0/iso8879/isodia.ent +35 -0
  111. data/lib/ojxv/schemas/jats/1.0/iso8879/isolat1.ent +83 -0
  112. data/lib/ojxv/schemas/jats/1.0/iso8879/isolat2.ent +142 -0
  113. data/lib/ojxv/schemas/jats/1.0/iso8879/isonum.ent +97 -0
  114. data/lib/ojxv/schemas/jats/1.0/iso8879/isopub.ent +105 -0
  115. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsa.ent +167 -0
  116. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsb.ent +143 -0
  117. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsc.ent +43 -0
  118. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsn.ent +114 -0
  119. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamso.ent +73 -0
  120. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isoamsr.ent +204 -0
  121. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isogrk3.ent +64 -0
  122. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomfrk.ent +75 -0
  123. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomopf.ent +49 -0
  124. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isomscr.ent +75 -0
  125. data/lib/ojxv/schemas/jats/1.0/iso9573-13/isotech.ent +182 -0
  126. data/lib/ojxv/schemas/jats/1.0/mathml/mmlalias.ent +564 -0
  127. data/lib/ojxv/schemas/jats/1.0/mathml/mmlextra.ent +122 -0
  128. data/lib/ojxv/schemas/jats/1.0/mathml2-qname-1.mod +286 -0
  129. data/lib/ojxv/schemas/jats/1.0/mathml2.dtd +2206 -0
  130. data/lib/ojxv/schemas/jats/1.0/oasis-exchange.ent +399 -0
  131. data/lib/ojxv/schemas/jats/1.0/xhtml-inlstyle-1.mod +34 -0
  132. data/lib/ojxv/schemas/jats/1.0/xhtml-table-1.mod +333 -0
  133. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk1.ent +70 -0
  134. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk2.ent +41 -0
  135. data/lib/ojxv/schemas/jats/1.0/xmlchars/isogrk4.ent +66 -0
  136. data/lib/ojxv/schemas/jats/1.1/JATS-XHTMLtablesetup1.ent +501 -0
  137. data/lib/ojxv/schemas/jats/1.1/JATS-ali-namespace1.ent +154 -0
  138. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-article1-mathml3.dtd +911 -0
  139. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-article1.dtd +894 -0
  140. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-custom-classes1.ent +326 -0
  141. data/lib/ojxv/schemas/jats/1.1/JATS-archive-oasis-custom-modules1.ent +269 -0
  142. data/lib/ojxv/schemas/jats/1.1/JATS-archivearticle1-mathml3.dtd +867 -0
  143. data/lib/ojxv/schemas/jats/1.1/JATS-archivearticle1.dtd +854 -0
  144. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-classes1.ent +291 -0
  145. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-mixes1.ent +420 -0
  146. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-models1.ent +1339 -0
  147. data/lib/ojxv/schemas/jats/1.1/JATS-archivecustom-modules1.ent +266 -0
  148. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-classes1.ent +384 -0
  149. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-mixes1.ent +321 -0
  150. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-models1.ent +1269 -0
  151. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthcustom-modules1.ent +249 -0
  152. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthoring1-mathml3.dtd +669 -0
  153. data/lib/ojxv/schemas/jats/1.1/JATS-articleauthoring1.dtd +655 -0
  154. data/lib/ojxv/schemas/jats/1.1/JATS-articlemeta1.ent +1817 -0
  155. data/lib/ojxv/schemas/jats/1.1/JATS-backmatter1.ent +393 -0
  156. data/lib/ojxv/schemas/jats/1.1/JATS-chars1.ent +525 -0
  157. data/lib/ojxv/schemas/jats/1.1/JATS-common-atts1.ent +221 -0
  158. data/lib/ojxv/schemas/jats/1.1/JATS-common1.ent +4273 -0
  159. data/lib/ojxv/schemas/jats/1.1/JATS-default-classes1.ent +1277 -0
  160. data/lib/ojxv/schemas/jats/1.1/JATS-default-mixes1.ent +455 -0
  161. data/lib/ojxv/schemas/jats/1.1/JATS-display1.ent +1000 -0
  162. data/lib/ojxv/schemas/jats/1.1/JATS-format1.ent +858 -0
  163. data/lib/ojxv/schemas/jats/1.1/JATS-funding1.ent +547 -0
  164. data/lib/ojxv/schemas/jats/1.1/JATS-journalmeta1.ent +454 -0
  165. data/lib/ojxv/schemas/jats/1.1/JATS-journalpub-oasis-custom-classes1.ent +378 -0
  166. data/lib/ojxv/schemas/jats/1.1/JATS-journalpub-oasis-custom-modules1.ent +270 -0
  167. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-classes1.ent +337 -0
  168. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-mixes1.ent +258 -0
  169. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-models1.ent +979 -0
  170. data/lib/ojxv/schemas/jats/1.1/JATS-journalpubcustom-modules1.ent +261 -0
  171. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing-oasis-article1-mathml3.dtd +889 -0
  172. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing-oasis-article1.dtd +872 -0
  173. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing1-mathml3.dtd +861 -0
  174. data/lib/ojxv/schemas/jats/1.1/JATS-journalpublishing1.dtd +845 -0
  175. data/lib/ojxv/schemas/jats/1.1/JATS-link1.ent +416 -0
  176. data/lib/ojxv/schemas/jats/1.1/JATS-list1.ent +494 -0
  177. data/lib/ojxv/schemas/jats/1.1/JATS-math1.ent +402 -0
  178. data/lib/ojxv/schemas/jats/1.1/JATS-mathml3-mathmlsetup1.ent +350 -0
  179. data/lib/ojxv/schemas/jats/1.1/JATS-mathml3-modules1.ent +190 -0
  180. data/lib/ojxv/schemas/jats/1.1/JATS-mathmlsetup1.ent +348 -0
  181. data/lib/ojxv/schemas/jats/1.1/JATS-modules1.ent +584 -0
  182. data/lib/ojxv/schemas/jats/1.1/JATS-nlmcitation1.ent +285 -0
  183. data/lib/ojxv/schemas/jats/1.1/JATS-notat1.ent +269 -0
  184. data/lib/ojxv/schemas/jats/1.1/JATS-oasis-namespace1.ent +223 -0
  185. data/lib/ojxv/schemas/jats/1.1/JATS-oasis-tablesetup1.ent +409 -0
  186. data/lib/ojxv/schemas/jats/1.1/JATS-para1.ent +481 -0
  187. data/lib/ojxv/schemas/jats/1.1/JATS-phrase1.ent +502 -0
  188. data/lib/ojxv/schemas/jats/1.1/JATS-publishing1.dtd +845 -0
  189. data/lib/ojxv/schemas/jats/1.1/JATS-references1.ent +1205 -0
  190. data/lib/ojxv/schemas/jats/1.1/JATS-related-object1.ent +283 -0
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  192. data/lib/ojxv/schemas/jats/1.1/JATS-xmlspecchars1.ent +389 -0
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  194. data/lib/ojxv/schemas/jats/1.1/iso8879/isocyr1.ent +88 -0
  195. data/lib/ojxv/schemas/jats/1.1/iso8879/isocyr2.ent +47 -0
  196. data/lib/ojxv/schemas/jats/1.1/iso8879/isodia.ent +35 -0
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  210. data/lib/ojxv/schemas/jats/1.1/iso9573-13/isomscr.ent +75 -0
  211. data/lib/ojxv/schemas/jats/1.1/iso9573-13/isotech.ent +182 -0
  212. data/lib/ojxv/schemas/jats/1.1/mathml/mmlalias.ent +564 -0
  213. data/lib/ojxv/schemas/jats/1.1/mathml/mmlextra.ent +122 -0
  214. data/lib/ojxv/schemas/jats/1.1/mathml2-qname-1.mod +286 -0
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  216. data/lib/ojxv/schemas/jats/1.1/mathml3-qname1.mod +294 -0
  217. data/lib/ojxv/schemas/jats/1.1/mathml3.dtd +1682 -0
  218. data/lib/ojxv/schemas/jats/1.1/oasis-exchange.ent +449 -0
  219. data/lib/ojxv/schemas/jats/1.1/xhtml-inlstyle-1.mod +34 -0
  220. data/lib/ojxv/schemas/jats/1.1/xhtml-table-1.mod +333 -0
  221. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk1.ent +70 -0
  222. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk2.ent +41 -0
  223. data/lib/ojxv/schemas/jats/1.1/xmlchars/isogrk4.ent +66 -0
  224. data/lib/ojxv/schemas/jats/1.1d1/JATS-XHTMLtablesetup1.ent +421 -0
  225. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-article1-mathml3.dtd +829 -0
  226. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-article1.dtd +813 -0
  227. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-custom-classes1.ent +277 -0
  228. data/lib/ojxv/schemas/jats/1.1d1/JATS-archive-oasis-custom-modules1.ent +221 -0
  229. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivearticle1-mathml3.dtd +791 -0
  230. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivearticle1.dtd +775 -0
  231. data/lib/ojxv/schemas/jats/1.1d1/JATS-archivecustom-classes1.ent +242 -0
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  878. data/lib/ojxv/schemas/jats/1.3d1/JATS-section1.ent +428 -0
  879. data/lib/ojxv/schemas/jats/1.3d1/JATS-xmlspecchars1.ent +493 -0
  880. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isobox.ent +61 -0
  881. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isocyr1.ent +88 -0
  882. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isocyr2.ent +47 -0
  883. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isodia.ent +35 -0
  884. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isolat1.ent +83 -0
  885. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isolat2.ent +142 -0
  886. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isonum.ent +97 -0
  887. data/lib/ojxv/schemas/jats/1.3d1/iso8879/isopub.ent +105 -0
  888. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsa.ent +167 -0
  889. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsb.ent +143 -0
  890. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsc.ent +43 -0
  891. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsn.ent +114 -0
  892. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamso.ent +73 -0
  893. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isoamsr.ent +204 -0
  894. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isogrk3.ent +64 -0
  895. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isomfrk.ent +75 -0
  896. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isomopf.ent +49 -0
  897. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isomscr.ent +75 -0
  898. data/lib/ojxv/schemas/jats/1.3d1/iso9573-13/isotech.ent +182 -0
  899. data/lib/ojxv/schemas/jats/1.3d1/mathml/mmlalias.ent +564 -0
  900. data/lib/ojxv/schemas/jats/1.3d1/mathml/mmlextra.ent +122 -0
  901. data/lib/ojxv/schemas/jats/1.3d1/mathml2-qname-1.mod +286 -0
  902. data/lib/ojxv/schemas/jats/1.3d1/mathml2.dtd +2206 -0
  903. data/lib/ojxv/schemas/jats/1.3d1/mathml3-qname1.mod +294 -0
  904. data/lib/ojxv/schemas/jats/1.3d1/mathml3.dtd +1682 -0
  905. data/lib/ojxv/schemas/jats/1.3d1/oasis-exchange.ent +487 -0
  906. data/lib/ojxv/schemas/jats/1.3d1/xhtml-inlstyle-1.mod +34 -0
  907. data/lib/ojxv/schemas/jats/1.3d1/xhtml-table-1.mod +333 -0
  908. data/lib/ojxv/schemas/jats/1.3d1/xmlchars/isogrk1.ent +70 -0
  909. data/lib/ojxv/schemas/jats/1.3d1/xmlchars/isogrk2.ent +41 -0
  910. data/lib/ojxv/schemas/jats/1.3d1/xmlchars/isogrk4.ent +66 -0
  911. data/lib/ojxv/version.rb +1 -1
  912. data/lib/ojxv.rb +7 -0
  913. metadata +928 -6
@@ -0,0 +1,1010 @@
1
+ <!-- ============================================================= -->
2
+ <!-- MODULE: Journal Archiving and Interchange DTD with OASIS -->
3
+ <!-- and XHTML Tables with MATHML 2.0 -->
4
+ <!-- VERSION: ANSI/NISO JATS Version 1.2d2 (Z39.96-2015) -->
5
+ <!-- DATE: December 2017 -->
6
+ <!-- -->
7
+ <!-- ============================================================= -->
8
+
9
+ <!-- ============================================================= -->
10
+ <!-- PUBLIC DOCUMENT TYPE DEFINITION -->
11
+ <!-- TYPICAL INVOCATION -->
12
+ <!--
13
+ "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with OASIS Tables v1.2d2 20180401//EN"
14
+ Delivered as file "JATS-archive-oasis-article1.dtd"
15
+ Available at:
16
+ http://jats.nlm.nih.gov/archiving/1.1/JATS-archive-oasis-article1.dtd
17
+ -->
18
+ <!-- ============================================================= -->
19
+
20
+
21
+ <!-- ============================================================= -->
22
+ <!-- SYSTEM: Journal Archiving and Interchange DTD with -->
23
+ <!-- OASIS Tables of the JATS DTD Suite -->
24
+ <!-- -->
25
+ <!-- PURPOSE: DTD to describe a full-text journal article. -->
26
+ <!-- This model is an extension of the Journal -->
27
+ <!-- Archiving and Interchange DTD that contains -->
28
+ <!-- both the XHTML table and the CALS OASIS -->
29
+ <!-- Exchange Table models. -->
30
+ <!-- -->
31
+ <!-- The Journal Archiving and Interchange DTD is an -->
32
+ <!-- application of the ANSI/NISO Z39.96 JATS Journal -->
33
+ <!-- Article Tag Set. It describes journal articles -->
34
+ <!-- and some non-article material such as product -->
35
+ <!-- and book reviews for repository or interchange -->
36
+ <!-- purposes. It describes both the metadata for a -->
37
+ <!-- journal article and the full content of -->
38
+ <!-- the article. -->
39
+ <!-- -->
40
+ <!-- This DTD was constructed using the modules in the -->
41
+ <!-- JATS DTD Suite, using almost no customization -->
42
+ <!-- beyond the addition of the OASIS Table Model. -->
43
+ <!-- -->
44
+ <!-- TAG SET SPONSOR -->
45
+ <!-- National Center for Biotechnology -->
46
+ <!-- Information (NCBI) -->
47
+ <!-- National Library of Medicine (NLM) -->
48
+ <!-- -->
49
+ <!-- CREATED FOR: -->
50
+ <!-- This DTD was created from the JATS DTD Suite. -->
51
+ <!-- Digital archives and publishers may use the -->
52
+ <!-- DTD as is for markup of journal literature or -->
53
+ <!-- related material for archiving and transferring -->
54
+ <!-- such material between archives or create a -->
55
+ <!-- custom XML DTD from the Suite for -->
56
+ <!-- these purposes. -->
57
+ <!-- -->
58
+ <!-- This DTD is in the public domain. An organization -->
59
+ <!-- that wishes to create its own DTD from the suite -->
60
+ <!-- may do so without permission from NLM. -->
61
+ <!-- -->
62
+ <!-- The suite has been set up to be extended using a -->
63
+ <!-- new DTD file and a new DTD-specific customization -->
64
+ <!-- module to redefine the many Parameter Entities. -->
65
+ <!-- Do not modify the suite directly or redistribute -->
66
+ <!-- modified versions of the suite. -->
67
+ <!-- -->
68
+ <!-- In the interest of maintaining consistency and -->
69
+ <!-- clarity for potential users, NLM requests: -->
70
+ <!-- -->
71
+ <!-- 1. If you create a DTD from the JATS DTD Suite -->
72
+ <!-- and intend to stay compatible with the suite, -->
73
+ <!-- then please include the following statement -->
74
+ <!-- as a comment in all of your DTD modules: -->
75
+ <!-- "Created from, and fully compatible with, -->
76
+ <!-- the ANSI/NISO Z39.96 Journal Article Tag -->
77
+ <!-- Suite (JATS)." -->
78
+ <!-- -->
79
+ <!-- 2. If you alter one or more modules of the suite, -->
80
+ <!-- then please rename your version and all its -->
81
+ <!-- modules to avoid any confusion with the -->
82
+ <!-- original suite. Also, please include the -->
83
+ <!-- following statement as a comment in all your -->
84
+ <!-- DTD modules: -->
85
+ <!-- "Based in part on, but not fully compatible -->
86
+ <!-- with, the ANSI/NISO Z39.96 Journal Article -->
87
+ <!-- Tag Suite (JATS)." -->
88
+ <!-- -->
89
+ <!-- ORIGINAL CREATION DATE: -->
90
+ <!-- December 2002 -->
91
+ <!-- -->
92
+ <!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96 -->
93
+ <!-- Working Group. Mulberry Technologies was -->
94
+ <!-- supported by National Center for Biotechnology -->
95
+ <!-- Information (NCBI), a center of the US National -->
96
+ <!-- Library of Medicine (NLM). -->
97
+ <!-- -->
98
+ <!-- The Journal Archiving and Interchange DTD is -->
99
+ <!-- built from the JATS DTD Suite. -->
100
+ <!-- -->
101
+ <!-- Suggestions for refinements and enhancements to -->
102
+ <!-- this DTD should be sent in email to: -->
103
+ <!-- jats@ncbi.nlm.nih.gov -->
104
+ <!-- ============================================================= -->
105
+
106
+
107
+ <!-- ============================================================= -->
108
+ <!-- DTD VERSION/CHANGE HISTORY -->
109
+ <!-- ============================================================= -->
110
+ <!--
111
+
112
+ Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
113
+ =============================================================
114
+ BITS Version 2.1 (DAL/BTU) v2.1 (2018-04-01)
115
+ JATS Version 1.2d2 (DAL/BTU) v1.2d2 (2018-04-01)
116
+
117
+ JATS is a continuing maintenance NISO Standard, which
118
+ requires voting by the ANSI and NISO memberships to be changed.
119
+ BITS is under continuous maintenance, and is modified at the
120
+ discretion of the working group.
121
+
122
+ This draft DTD represents an interim version of the
123
+ non-normative JATS DTD Suite, as an indication to JATS users
124
+ the decisions that have been made by the JATS Standing
125
+ Committee. This draft has not yet been given public review
126
+ or voting. The formal public identifiers were changed in the
127
+ modules and the catalogs.
128
+
129
+ 33. NON-MONETARY SUPPORT - Inside <front-stub-mod> added new
130
+ <support-group> to add hold both funding and
131
+ non-monetary support descriptions. <support-group> is
132
+ both a peer to <funding-group> (backward compatibility)
133
+
134
+ 32. DATE-NOT-AVAILABLE - Inside <article-meta> and <front-stub>,
135
+ a new element <pub-date-not-available> was added as an
136
+ alternatives to <pub-date>. The meaning is that a
137
+ publication date was (for whatever reason) not available.
138
+ Presence of the element says nothing about publication
139
+ status.
140
+
141
+ 31. INLINE INDEX TERMS - Added invocation to BITS inline
142
+ (embedded) index term model
143
+
144
+ 30. @dtd-version becomes "1.2d2" from "1.2d1"
145
+
146
+ 29. BITS "2.0" and "v2.0 20151225" became
147
+ BITS "2.1" and "v2.1 20180401".
148
+
149
+ JATS "1.2d1" and "v1.2d1 20171231" became
150
+ JATS "1.2d2" and "v1.2d2 20180401".
151
+
152
+ No module names were changed.
153
+ =============================================================
154
+ JATS Version 1.2d1 (ANSI/NISO Z39.96-2015)
155
+ (DAL/BTU) v1.2d2 (2017-12-31)
156
+
157
+ NISO JATS is a continuing maintenance NISO Standard, which
158
+ requires voting by the ANSI and NISO memberships to be changed.
159
+
160
+ This draft DTD represents an interim version of the
161
+ non-normative JATS DTD Suite, as an indication to JATS users
162
+ the decisions that have been made by the JATS Standing
163
+ Committee. This draft has not yet been given public review
164
+ or voting. The formal public identifiers were changed in the
165
+ modules and the catalogs.
166
+
167
+ 28. JATS "1.2d1" and "v1.2d1 20170631" became
168
+ JATS "1.2d1" and "v1.2d1 20171231".
169
+
170
+ =============================================================
171
+ JATS Version 1.2d1 (DAL/BTU) v1.2d1 (2017-06-31)
172
+
173
+ NISO JATS is a continuing maintenance NISO Standard, which
174
+ requires voting by the ANSI and NISO memberships to be changed.
175
+
176
+ This draft DTD represents an interim version of the
177
+ non-normative JATS DTD Suite, as an indication to JATS users
178
+ the decisions that have been made by the JATS Standing
179
+ Committee. This draft has not yet been given public review
180
+ or voting. The formal public identifiers were changed in the
181
+ modules and the catalogs.
182
+
183
+ 27. xsi:noNamespaceSchemaLocation added to attribute list of
184
+ <article>. Most modern processors do not need this, but
185
+ a user with an older processor requested it, so the JATS
186
+ Standing Committee acquiesced. This pseudo-attribute
187
+ cannot be used with a DOCTYPE declaration.
188
+
189
+ 26. FRONT STUB MODEL
190
+ - ARTICLE VERSION - Added new element <article-version>
191
+ inside <front-stub> to hold one version number for the
192
+ article. <article-version> element may repeat inside
193
+ <article-version-alternatives>to hold version numbers
194
+ from different systems.
195
+
196
+ - NO DATE - <pub-date> (optional repeatable) is now
197
+ followed by the optional new element
198
+ <pub-date-not-available>.
199
+
200
+ - PUB-HISTORY - <pub-history> (optional) added to hold
201
+ <event>s.
202
+
203
+ 25. @dtd-version becomes "1.2d1" from 1.1
204
+
205
+ 24. JATS became version "1.2d1" and "v1.2d1 20170631"
206
+
207
+ =============================================================
208
+ JATS Version 1.1 (DAL/BTU) v1.1 (2015-12-15)
209
+
210
+ JATS is a continuing maintenance NISO Standard, which
211
+ requires voting by the ANSI and NISO memberships to be changed.
212
+ JATS 1.1 was approved in late 2015, so the formal public
213
+ identifiers were changed in the modules and the catalogs.
214
+ No model or attribute changes were made at this time.
215
+
216
+ 24. xsi:noNamespaceSchemaLocation added to attribute list of
217
+ <article>. Most modern processors do not need this, but
218
+ a user with an older processor requested it, so the JATS
219
+ Standing Committee acquiesced. This pseudo-attribute
220
+ cannot be used with a DOCTYPE declaration.
221
+
222
+ 23. JATS became version "1.1" and "v1.1 20151215"
223
+
224
+ =============================================================
225
+ JATS Version 1.1d3 (DAL/BTU) v1.1d3 (2015-03-01)
226
+
227
+ The changes in this release are in response to NISO
228
+ License and Indicators Recommended Practice.
229
+
230
+ NISO JATS is a continuing maintenance NISO Standard, which
231
+ requires voting by the NISO membership to be changed. This
232
+ Committee Draft 1.1d3 will be sent to the NISO voting
233
+ membership, to become (if approved) NISO JATS 1.1.
234
+
235
+ This draft DTD represents an interim version of the
236
+ non-normative JATS DTD Suite, as an indication to JATS users
237
+ the decisions that have been made by the JATS Standing
238
+ Committee.
239
+
240
+ 22. ALI - Added ALI namespace for NISO Access and Indicator
241
+ license reference and free to read elements.
242
+
243
+ 21. JATS became version "1.1d3" and "v1.1d3 20150301"
244
+
245
+ =============================================================
246
+ JATS Version 1.1d2 (DAL/BTU) v1.1d2 (2014-09-30)
247
+
248
+ NISO JATS is a continuing maintenance NISO Standard, which
249
+ requires voting by the NISO membership to be changed. This
250
+ Committee Draft 1.1d2 will be sent to the NISO voting
251
+ membership, to become (if approved) NISO JATS 1.1.
252
+
253
+ This catalog represents an interim version of the
254
+ non-normative JATS DTD Suite, as an indication to JATS users
255
+ the decisions that have been made by the JATS Standing
256
+ Committee.
257
+
258
+ 20. <VOLUME> INSIDE <ARTICLE-META> and <FRONT-STUB>
259
+ - Allowed <volume> to repeat inside <article-meta>, the types to
260
+ be distinguished using @content-type
261
+ - Added new optional element <volume-issue-group> inside
262
+ <article-meta) following all volume and issue elements
263
+ to hold volume-issue pairs (or n-tuples) when a second
264
+ and subsequent <volume> has its own related issue
265
+ information.
266
+ - Made <issue> repeatable, for those who choose not to use
267
+ the new wrapper element.
268
+
269
+ 19. JATS became version "1.1d2" and "v1.1d2 20140930//EN"
270
+
271
+ =============================================================
272
+ NISO JATS Version 1.1d1 (DAL/BTU) v1.1 (2013-11-15)
273
+
274
+ ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1)
275
+
276
+ NISO JATS Standing Committee met and answered the requests and
277
+ suggestions from the NISO request forms.
278
+
279
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
280
+ XSDs, RNGs and supporting documentation are available at
281
+ http://jats.nlm.nih.gov/1.0/
282
+
283
+ 18. DTD Version - Updated the DTD-version attribute to "1.1d1" and
284
+ the formal public identifier to the date: "v1.1d1 20130915//EN".
285
+
286
+ 17. GLOBAL ATTRIBUTES - Added the new module for Common (global)
287
+ attributes: %JATS-common-atts.ent;, called in before the
288
+ customizations models module.
289
+
290
+ 16. GLOBAL ATTRIBUTES - Added the new parameter entity
291
+ %jats-common-atts;
292
+ to every element in this module. This PE adds (for now) the
293
+ @id attribute and the @xml:base attribute to every element,
294
+ whether metadata or narrative.
295
+ Since the @id in this parameter entity is optional, a second
296
+ parameter entity jats-common-atts-id-required was also added.
297
+ The two are kept in sync with the jats-base-atts parameter
298
+ entity.
299
+ This added a new attribute list to:
300
+ - back
301
+ - front
302
+ - front-stub
303
+
304
+ 15. ABSTRACTS AND KEYWORDS
305
+ Changed "abstract*" to "(%abstract.class;)*"
306
+ and "kwd-group*" to "(%kwd-group.class;)*" since those
307
+ classes now exist. Elements should have a limited number of
308
+ ways to be invoked.
309
+ - front-stub (through %front-stub-model;)
310
+
311
+ =============================================================
312
+ NISO JATS Version 1.0 (DAL/BTU) v1.0 (2012-xx-xx)
313
+
314
+ ANSI/NISO Z39.96-2012 (Version 1.0)
315
+
316
+ Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,
317
+ XSDs, RNGs and supporting documentation are available at
318
+ http://jats.nlm.nih.gov/1.0/
319
+
320
+ 14. FRONT MODEL - The model for front (%front-model;) in this
321
+ modules did not agree with the front model in the regular
322
+ archiving module. Replaced this model with the one from the
323
+ archiving module.
324
+
325
+ 13. RELATED OBJECT - Added <related-object> everywhere
326
+ <related-article> was used, including inside
327
+ <front-stub> using front-stub-model.
328
+
329
+ 12. OASIS NAMESPACE - Added the OASIS table namespace handling,
330
+ which, by default, places a namespace prefix of "oasis" on
331
+ the OASIS CALS Exchange Table Model.
332
+ - Added call to JATS-oasis-namespace.ent (which sets up
333
+ the OASIS namespace URI and the prefix "oasis")
334
+ - Added %oasis.xmlns.attrib; attribute to <article>
335
+ - Altered the custom classes module to use the new
336
+ namespaced OASIS element names for <table> and <tbody>
337
+ (%otable.qname; and %otbody.qname;)
338
+
339
+ NOTE: The XHTML table material was not removed, so both table
340
+ models still work (using <table> and <oasis:table> respectively.
341
+
342
+ 11. Updated the DTD-version attribute to "1.0" and the formal
343
+ public identifier to the date: "v1.0 20120330//EN".
344
+
345
+ =============================================================
346
+ Version 0.4 (DAL/BTU) v0.4 (2011-01-31)
347
+
348
+ This Tag Set is in the process of becoming a NISO standard.
349
+ The version numbers are starting over from 0.4", as a Trial
350
+ Use Draft, to be made into "Version 1.0" when the Tag Suite
351
+ becomes a NISO standard. Thus, the version number that would
352
+ have been "NLM Version 3.1 Draft" has become NISO JATS
353
+ "Version 0.4".
354
+
355
+ Details on NISO Trial Use Draft Version 0.4 are available at
356
+ http://jats.nlm.nih.gov/JATS-0.4.
357
+
358
+ 10. Updated the DTD-version attribute to "0.4"
359
+
360
+ 9. Updated the public identifier to "v0.4 20110131",
361
+ modified the formal public identifier to include "JATS (Z39.96)",
362
+ and the filename as delivered to include "JATS" and the
363
+ new version number "0". Also included the phrase
364
+ "(OASIS Tables)" in the formal name.
365
+
366
+ Caution: Version 0.4 is fully compatible with Version 3.0, but
367
+ the following change could break some customizations.
368
+
369
+ 8. BODY ATTRIBUTES - Added attribute list and new PE %body-atts;
370
+ to the model of <body>. The only current attribute is
371
+ @specific-use, which indicates, for example, not a real
372
+ tagged XML body, but a 'bag of words" for indexing purposes.
373
+
374
+ 7. I18N - Changed the default for @xml:lang from "en" to
375
+ #IMPLIED, so that the @xml:lang would inherit properly and
376
+ not need to be over-ridden in
377
+ - <sub-article> through %sub-article-atts;
378
+ - <response> through %response-atts;
379
+
380
+ 6. XML:LANG - Added @xml:lang to the following elements:
381
+ Added to facilitate multiple languages.
382
+ - article
383
+
384
+ 5. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives>
385
+ to <front-stub> through %front-stub-model;. This element
386
+ will hold multiple <aff>s that are a representation of a
387
+ single affiliation, for example, the name of an institution
388
+ in two languages or two scripts.
389
+
390
+ =============================================================
391
+ Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
392
+
393
+ Version 3.0 is the first non-backward-compatible release.
394
+ In addition to the usual incremental changes, some
395
+ elements and attributes have been renamed and/or remodeled
396
+ to better meet user needs and to increase tag set consistency.
397
+ All module change histories are available through the Tag Suite
398
+ web site at http://dtd.nlm.nih.gov.
399
+
400
+ Details on version 3.0 are available at
401
+ http://dtd.nlm.nih.gov/3.0.
402
+
403
+ 4. AFFILIATION ALTERNATIVES - Added the element <aff-alternatives>
404
+ to <front-stub> through %front-stub-model;. This element
405
+ will hold multiple <aff>s that are a representation of a
406
+ single affiliation, for example, the name of an institution
407
+ in two languages or two scripts.
408
+
409
+ 3. LANGUAGE CODES - Codes for languages as well as variants,
410
+ transliterations, regions, scripts, and combinations
411
+ such as "Jpan"(Han + Hiragana + Katakana). These values should be
412
+ taken from RFC 5646/W3C/IANA Subtag Registry recommendations
413
+ and can be found online at:
414
+ http://www.iana.org/assignments/language-subtag-registry
415
+
416
+ 2. Changed default @xml:lang from "EN" from "en" to match latest
417
+ RFC 4646/W3C/IANA Subtag Registry recommendations
418
+
419
+ 1. Updated public identifier to "v3.0 20080202//EN" -->
420
+
421
+ <!-- ============================================================= -->
422
+ <!-- Details concerning
423
+ ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs,
424
+ RNGs and supporting documentation are available at
425
+ http://jats.nlm.nih.gov/1.1/ -->
426
+
427
+ <!-- ============================================================= -->
428
+ <!-- DESIGN CONSIDERATIONS -->
429
+ <!-- ============================================================= -->
430
+
431
+
432
+ <!-- MODULAR DTD LIBRARY
433
+ A set of journal archiving and interchange
434
+ DTD modules was written as the basis for
435
+ publishing, interchange, and repository
436
+ DTDs, with the intention that DTDs for
437
+ specific purposes, such as this Journal
438
+ Archiving and Interchange DTD, would be
439
+ developed based on them.
440
+
441
+ This archiving DTD has been designed to
442
+ be descriptive, open, and inclusive to
443
+ allow journal articles to be translated into
444
+ this format as conveniently as possible
445
+ from a wide variety of proprietary journal
446
+ article DTDs (such as Blackwell, Keton, and
447
+ Ovid).
448
+
449
+ This Archiving DTD has been developed from
450
+ the JATS DTD Suite modules, in the approved
451
+ manner, making changes to the declarations
452
+ in those modules by over-riding Parameter
453
+ Entity contents by redefining the entities
454
+ in the:
455
+ %archive-oasis-custom-classes.ent;
456
+ %archivecustom-mixes.ent;
457
+ %archivecustom-models.ent;
458
+ modules, which are called from this DTD file.
459
+ No changes to any of the original JATS DTD
460
+ Suite modules are required in order to
461
+ use this DTD. -->
462
+
463
+
464
+ <!-- ============================================================= -->
465
+ <!-- MODULES OF MODULES INVOKED -->
466
+ <!-- ============================================================= -->
467
+
468
+
469
+ <!-- MODULE TO NAME DTD-SPECIFIC MODULES -->
470
+ <!-- Names all DTD-specific external modules -->
471
+ <!ENTITY % archive-oasis-custom-modules.ent
472
+ PUBLIC
473
+ "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with OASIS Tables DTD-Specific Modules v1.2d2 20180401//EN"
474
+ "JATS-archive-oasis-custom-modules1.ent" >
475
+ %archive-oasis-custom-modules.ent;
476
+
477
+
478
+ <!-- MODULE TO NAME THE MODULES -->
479
+ <!-- Declares all the external modules that are
480
+ part of the modular JATS DTD Suite library.
481
+ Thus it does NOT declare itself; the
482
+ DTD-specific module-of-modules; any
483
+ DTD-specific class, mix, or model over-ride
484
+ modules; or any content modules specific to
485
+ this DTD. These modules are declared in the
486
+ DTD-specific module of modules.
487
+ Since this module declares but does not
488
+ invoke modules, this DTD then invokes any
489
+ modules it uses by referencing the external
490
+ Parameter Entities defined in the Module of
491
+ Modules. To include a set of elements (such
492
+ as all the lists or the table elements) this
493
+ module defines the external Parameter Entity
494
+ for the module(s) that contains the MathML
495
+ declarations and the DTD references that
496
+ entity. -->
497
+ <!ENTITY % modules.ent PUBLIC
498
+ "-//NLM//DTD JATS (Z39.96) JATS DTD Suite Module of Modules v1.2d2 20180401//EN"
499
+ "JATS-modules1.ent" >
500
+ %modules.ent;
501
+
502
+ <!-- ============================================================= -->
503
+ <!-- OASIS NAMESPACE SETUP -->
504
+ <!-- ============================================================= -->
505
+
506
+
507
+ <!-- DEFINE OASIS NAMESPACE ATTRIBUTE AND PREFIX-->
508
+ <!-- Names the module defines the OASIS CALS
509
+ Exchange Model namespace, prefix, and
510
+ pseudo-attribute @xmlns and all the
511
+ element qnames for CALS Tables. -->
512
+ %JATS-oasis-namespace.ent;
513
+
514
+ <!-- ============================================================= -->
515
+ <!-- NISO ALI NAMESPACE SETUP -->
516
+ <!-- ============================================================= -->
517
+
518
+
519
+ <!-- DEFINE ALI NAMESPACE ATTRIBUTE AND PREFIX -->
520
+ <!-- Names the module defines the NISO Access and
521
+ Indicators Exchange Model namespace, prefix,
522
+ and pseudo-attribute @xmlns. -->
523
+ %JATS-ali-namespace.ent;
524
+
525
+
526
+ <!-- ============================================================= -->
527
+ <!-- SET UP COMMON (ALL ELEMENT) ATTRIBUTES -->
528
+ <!-- ============================================================= -->
529
+
530
+
531
+ <!-- COMMON ATTRIBUTES MODULE -->
532
+ <!-- Set up the common attributes, those used on
533
+ nearly all elements.
534
+ Must be called before the custom models
535
+ module. -->
536
+ %JATS-common-atts.ent;
537
+
538
+
539
+ <!-- ============================================================= -->
540
+ <!-- CUSTOMIZATION MODULES INVOKED -->
541
+ <!-- Note: These modules must be called after -->
542
+ <!-- all Module of Modules but before any other -->
543
+ <!-- modules. Unlike any other grouping, order -->
544
+ <!-- of these modules matters. -->
545
+ <!-- ============================================================= -->
546
+
547
+
548
+ <!-- DTD-SPECIFIC CLASS CUSTOMIZATIONS MODULE -->
549
+ <!-- Names the module that holds the DTD-specific
550
+ class definitions for the Journal Archiving
551
+ and Interchange DTD that over-rides the Suite
552
+ defaults.
553
+ (Defined in
554
+ %archive-oasis-custom-modules.ent; ) -->
555
+ %archive-oasis-custom-classes.ent;
556
+
557
+
558
+ <!-- DEFAULT ELEMENT CLASSES MODULE -->
559
+ <!-- Names the module that holds the standard
560
+ class definitions for the JATS DTD Suite. -->
561
+ %default-classes.ent;
562
+
563
+
564
+ <!-- DTD-SPECIFIC MIX CUSTOMIZATIONS MODULE -->
565
+ <!-- Set up the Parameter Entities and element
566
+ class definitions that will be used to
567
+ over-ride some element mixes in this DTD.
568
+ (Defined in
569
+ %archive-oasis-custom-modules.ent; ) -->
570
+ %archivecustom-mixes.ent;
571
+
572
+
573
+ <!-- DEFAULT MIX CUSTOMIZATIONS MODULE -->
574
+ <!-- Names the module that holds the standard
575
+ mix definitions for the JATS DTD Suite. -->
576
+ %default-mixes.ent;
577
+
578
+
579
+ <!-- DTD-SPECIFIC MODELS/ATTRIBUTES CUSTOMIZATIONS
580
+ MODULE -->
581
+ <!-- Names the module that holds the over-rides
582
+ of content models, attribute lists, elements
583
+ lists to be used in content models, and
584
+ attribute values. These are DTD-specific.
585
+ (Defined in
586
+ %archive-oasis-custom-modules.ent; ) -->
587
+ %archivecustom-models.ent;
588
+
589
+
590
+ <!-- ============================================================= -->
591
+ <!-- COMMON (SHARED) ELEMENTS MODULE INVOKED -->
592
+ <!-- ============================================================= -->
593
+
594
+
595
+ <!-- COMMON (SHARED) DECLARATIONS -->
596
+ <!-- Declarations for elements, attributes,
597
+ entities, and Notations that are shared by
598
+ more than one class module. Note: Must be
599
+ called before any of the class modules. -->
600
+
601
+ %common.ent;
602
+
603
+
604
+ <!-- ============================================================= -->
605
+ <!-- JOURNAL ARTICLE CLASS ELEMENTS (alpha) -->
606
+ <!-- ============================================================= -->
607
+
608
+ <!-- ARTICLE METADATA ELEMENTS -->
609
+ %articlemeta.ent;
610
+
611
+
612
+ <!-- BACK MATTER ELEMENTS -->
613
+ %backmatter.ent;
614
+
615
+
616
+ <!-- DISPLAY (GRAPHICAL) ELEMENTS -->
617
+ %display.ent;
618
+
619
+
620
+ <!-- FORMATTING ELEMENT CLASSES -->
621
+ <!-- Elements that change rendition/display. -->
622
+ %format.ent;
623
+
624
+
625
+ <!-- FUNDING ELEMENTS -->
626
+ <!-- Elements that describe the sponsorship or
627
+ open access -->
628
+ %funding.ent;
629
+
630
+
631
+ <!-- JOURNAL METADATA ELEMENTS -->
632
+ %journalmeta.ent;
633
+
634
+
635
+ <!-- LINK CLASS ELEMENTS -->
636
+ %link.ent;
637
+
638
+
639
+ <!-- LIST CLASS ELEMENTS -->
640
+ %list.ent;
641
+
642
+
643
+ <!-- MATH ELEMENTS -->
644
+ %math.ent;
645
+
646
+
647
+ <!-- NLM CITATION ELEMENT -->
648
+ %nlmcitation.ent;
649
+
650
+
651
+ <!-- PARAGRAPH-LEVEL ELEMENTS -->
652
+ %para.ent;
653
+
654
+
655
+ <!-- PHRASE-LEVEL ELEMENTS -->
656
+ %phrase.ent;
657
+
658
+
659
+ <!-- BIBLIOGRAPHIC REFERENCE (CITATION)
660
+ CLASS ELEMENTS -->
661
+ %references.ent;
662
+
663
+
664
+ <!-- RELATED OBJECT ELEMENT -->
665
+ <!-- Defines the <related-object> element to
666
+ describe a related object such as a
667
+ related book or a dataset. -->
668
+ %related-object.ent;
669
+
670
+
671
+ <!-- SECTION ELEMENTS -->
672
+ %section.ent;
673
+
674
+
675
+ <!-- ============================================================= -->
676
+ <!-- THE REST OF THE EXTERNAL MODULES INVOKED -->
677
+ <!-- ============================================================= -->
678
+
679
+
680
+ <!-- BITS EMBEDDED INDEX ELEMENTS MODULE -->
681
+ <!-- Element declarations the index elements
682
+ which are embedded in the article
683
+ narrative. -->
684
+ %index-term.ent;
685
+
686
+ <!-- ============================================================= -->
687
+ <!-- THE REST OF THE EXTERNAL MODULES INVOKED -->
688
+ <!-- ============================================================= -->
689
+
690
+
691
+ <!-- MATHML SETUP MODULE -->
692
+ <!-- Invoke the MathML modules -->
693
+ %mathmlsetup.ent;
694
+
695
+
696
+ <!-- XHTML TABLE SETUP MODULE -->
697
+ <!-- Set up the necessary Parameter Entity values
698
+ and then invoke XHTML (HTML 4.0) table
699
+ module -->
700
+ %XHTMLtablesetup.ent;
701
+
702
+
703
+ <!-- OASIS EXCHANGE (CALS) TABLE SETUP MODULE -->
704
+ <!-- Set up the necessary Parameter Entity values
705
+ and then invokes OASIS Exchange table
706
+ module -->
707
+ %oasis-tablesetup.ent;
708
+
709
+
710
+ <!-- SPECIAL CHARACTERS DECLARATIONS -->
711
+ <!-- Standard XML special character entities
712
+ used in this DTD -->
713
+ %xmlspecchars.ent;
714
+
715
+
716
+ <!-- CUSTOM SPECIAL CHARACTERS DECLARATIONS -->
717
+ <!-- Custom special character entities created
718
+ specifically for use in this DTD Suite -->
719
+ %chars.ent;
720
+
721
+
722
+ <!-- NOTATION DECLARATIONS MODULE -->
723
+ %notat.ent;
724
+
725
+
726
+ <!-- ============================================================= -->
727
+ <!-- PARAMETER ENTITIES FOR ATTRIBUTE LISTS -->
728
+ <!-- ============================================================= -->
729
+
730
+
731
+ <!-- DTD VERSION -->
732
+ <!-- What version of this DTD was used to make
733
+ the document instance under consideration.
734
+ Note that this is a fixed value that should
735
+ change every time the DTD changes versions or
736
+ revisions. -->
737
+ <!ENTITY % dtd-version
738
+ "dtd-version
739
+ CDATA #FIXED '1.2d2'" >
740
+
741
+
742
+ <!-- ARTICLE ATTRIBUTES -->
743
+ <!-- Attributes for the top-level element
744
+ <article> -->
745
+ <!ENTITY % article-atts
746
+ "%jats-common-atts;
747
+ article-type
748
+ CDATA #IMPLIED
749
+ specific-use
750
+ CDATA #IMPLIED
751
+ xml:lang NMTOKEN 'en'
752
+ %dtd-version;
753
+ %XLINK.xmlns.attrib;
754
+ %MATHML.xmlns.attrib;
755
+ %Schema.xmlns.attrib;
756
+ %ali.xmlns.attrib;
757
+ %oasis.xmlns.attrib;
758
+ %Schema.prefix;:noNamespaceSchemaLocation
759
+ CDATA #IMPLIED" >
760
+
761
+
762
+ <!-- BACK ATTRIBUTES -->
763
+ <!-- Attributes for the <back> element -->
764
+ <!ENTITY % back-atts
765
+ "%jats-common-atts;" >
766
+
767
+
768
+ <!-- BODY ATTRIBUTES -->
769
+ <!-- Attributes for the <body> element -->
770
+ <!ENTITY % body-atts
771
+ "%jats-common-atts;
772
+ specific-use
773
+ CDATA #IMPLIED" >
774
+
775
+
776
+ <!-- FRONT ATTRIBUTES -->
777
+ <!-- Attributes for the <front> element -->
778
+ <!ENTITY % front-atts
779
+ "%jats-common-atts;" >
780
+
781
+
782
+ <!-- FRONT STUB ATTRIBUTES -->
783
+ <!-- Attributes for the <front-stub> element -->
784
+ <!ENTITY % front-stub-atts
785
+ "%jats-common-atts;" >
786
+
787
+
788
+ <!-- SUB-ARTICLE ATTRIBUTES -->
789
+ <!-- Attributes for the <sub-article> element -->
790
+ <!ENTITY % sub-article-atts
791
+ "%jats-common-atts;
792
+ article-type
793
+ CDATA #IMPLIED
794
+ specific-use
795
+ CDATA #IMPLIED
796
+ xml:lang NMTOKEN #IMPLIED" >
797
+
798
+
799
+ <!-- RESPONSE ATTRIBUTES -->
800
+ <!-- Attributes for the <response> element -->
801
+ <!ENTITY % response-atts
802
+ "%jats-common-atts;
803
+ response-type
804
+ CDATA #IMPLIED
805
+ specific-use
806
+ CDATA #IMPLIED
807
+ xml:lang NMTOKEN #IMPLIED" >
808
+
809
+
810
+ <!-- ============================================================= -->
811
+ <!-- JOURNAL ARTICLE ELEMENTS -->
812
+ <!-- ============================================================= -->
813
+
814
+
815
+ <!-- ARTICLE MODEL (LIMITED) -->
816
+ <!-- Article-like model used for, for example,
817
+ a short sub-article such as a news brief that
818
+ is contained in side a journal article.
819
+ -->
820
+ <!ENTITY % article-short-model
821
+ "((front | front-stub), body?, back?,
822
+ floats-group?)" >
823
+
824
+
825
+ <!-- ARTICLE MODEL WITH SUB-ARTICLE OR RESPONSE -->
826
+ <!-- Typical journal article model, which may
827
+ contain extended components, such as
828
+ sub-articles or responses, but which usually
829
+ contains neither. -->
830
+ <!ENTITY % article-full-model
831
+ "(front, body?, back?, floats-group?,
832
+ (sub-article* | response*) )" >
833
+
834
+
835
+ <!-- ARTICLE -->
836
+ <!-- The complete content of a journal article.
837
+ Details at:
838
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=article
839
+ -->
840
+ <!ELEMENT article %article-full-model; >
841
+ <!ATTLIST article
842
+ %article-atts; >
843
+
844
+
845
+ <!-- ============================================================= -->
846
+ <!-- FRONT MATTER ELEMENTS -->
847
+ <!-- ============================================================= -->
848
+
849
+
850
+ <!-- FRONT MATTER MODEL -->
851
+ <!-- Model for the <front> matter (the header
852
+ metadata) of a journal article) -->
853
+ <!ENTITY % front-model "(journal-meta?, article-meta,
854
+ (%list.class; | %front.class; |
855
+ %front-back.class;)* )" >
856
+
857
+
858
+ <!-- FRONT MATTER -->
859
+ <!-- The metadata concerning an article, such as
860
+ the name and issue of the journal in which it
861
+ appears and the name and author(s) of the
862
+ article.
863
+ Details at:
864
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=front
865
+ -->
866
+ <!ELEMENT front %front-model; >
867
+ <!ATTLIST front
868
+ %front-atts; >
869
+
870
+
871
+ <!-- ============================================================= -->
872
+ <!-- BODY ELEMENTS -->
873
+ <!-- ============================================================= -->
874
+
875
+
876
+ <!-- BODY MODEL -->
877
+ <!-- Content model for the Body (main textual
878
+ content) of a journal article. -->
879
+ <!ENTITY % body-model "((%para-level;)*, (%sec-level;)*,
880
+ sig-block?)" >
881
+
882
+
883
+ <!-- BODY OF THE ARTICLE -->
884
+ <!-- The main textual portion of the article that
885
+ conveys the content.
886
+ Details at:
887
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=body
888
+ -->
889
+ <!ELEMENT body %body-model; >
890
+ <!ATTLIST body
891
+ %body-atts; >
892
+
893
+
894
+ <!-- ============================================================= -->
895
+ <!-- BACK MATTER ELEMENTS -->
896
+ <!-- ============================================================= -->
897
+
898
+
899
+ <!-- BACK MATTER MODEL -->
900
+ <!-- Content model for the Back Matter (ancillary
901
+ material such as appendices) of a journal
902
+ article. -->
903
+ <!ENTITY % back-model "(label?, title*,
904
+ (%doc-back-matter-mix;)* )" >
905
+
906
+
907
+ <!-- BACK MATTER -->
908
+ <!-- Ancillary or supporting material not included
909
+ as part of the main textual content of a
910
+ journal article, for example appendices and
911
+ acknowledgments.
912
+ Details at:
913
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=back
914
+ -->
915
+ <!ELEMENT back %back-model; >
916
+ <!ATTLIST back
917
+ %back-atts; >
918
+
919
+
920
+ <!-- ============================================================= -->
921
+ <!-- SUB-ARTICLE -->
922
+ <!-- ============================================================= -->
923
+
924
+
925
+ <!-- SUB-ARTICLE MODEL -->
926
+ <!-- Content model for the <sub-article> element
927
+ -->
928
+ <!ENTITY % sub-article-model
929
+ "( (front | front-stub), body?, back?,
930
+ floats-group?,
931
+ (sub-article* | response*) )" >
932
+
933
+
934
+ <!-- SUB-ARTICLE -->
935
+ <!-- An article that is completely contained
936
+ inside another article. Both the article and
937
+ the sub-article have their own metadata. The
938
+ article has at very least journal and issue
939
+ information and start and end pages; it may
940
+ have a title, author, or other metadata.
941
+ Details at:
942
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=sub-article
943
+ -->
944
+ <!ELEMENT sub-article %sub-article-model; >
945
+ <!ATTLIST sub-article
946
+ %sub-article-atts; >
947
+
948
+
949
+ <!-- FRONT MODEL STUB -->
950
+ <!-- Content model for the <front-stub> element
951
+ -->
952
+ <!ENTITY % front-stub-model
953
+ "(article-id*, (%article-version.class;)?,
954
+ article-categories?,
955
+ title-group?,
956
+ (%contrib-group.class; |
957
+ %aff-alternatives.class; | %x.class;)*,
958
+ author-notes?, ( (%pub-date.class;)* |
959
+ pub-date-not-available?),
960
+ volume*, volume-id*, volume-series?,
961
+ issue*, issue-id*, issue-title*,
962
+ issue-sponsor*, issue-part?,
963
+ volume-issue-group*, isbn*,
964
+ supplement?,
965
+ ( ( (fpage, lpage?)?, page-range?) |
966
+ elocation-id )?,
967
+ (%address-link.class; | product |
968
+ supplementary-material)*,
969
+ history?, pub-history?, permissions?,
970
+ self-uri*, (%related-article.class;)*,
971
+ (%abstract.class;)*,
972
+ trans-abstract*, (%kwd-group.class;)*,
973
+ funding-group*, support-group*,
974
+ conference*, counts?,
975
+ custom-meta-group?)" >
976
+
977
+
978
+ <!-- STUB FRONT METADATA -->
979
+ <!-- A reduced metadata set for use in
980
+ sub-articles and responses, which will
981
+ inherit metadata not defined in the stub
982
+ from the enclosing article
983
+ Details at:
984
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=front-stub
985
+ -->
986
+ <!ELEMENT front-stub %front-stub-model; >
987
+ <!ATTLIST front-stub
988
+ %front-stub-atts; >
989
+
990
+
991
+ <!-- ============================================================= -->
992
+ <!-- RESPONSE ELEMENTS -->
993
+ <!-- ============================================================= -->
994
+
995
+
996
+ <!-- RESPONSE -->
997
+ <!-- Reply, response, or commentary concerning the
998
+ journal article. In the typical case, the
999
+ response is included in the same XML package
1000
+ as the original article, and thus attached
1001
+ at the end of the article proper.
1002
+ Details at:
1003
+ http://jats.nlm.nih.gov/archiving/tag-library/1.2d2/index.html?elem=response
1004
+ -->
1005
+ <!ELEMENT response %article-short-model; >
1006
+ <!ATTLIST response
1007
+ %response-atts; >
1008
+
1009
+
1010
+ <!-- ================== End Journal Archiving and Interchange DTD -->